F215923

General Info

Members Datasets Scaffolds Average Seq Length
153 100 306 276

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10000184|Ga0065704_10000184573
Length 307
Sequence MTVSKSIKIFRTAQQLRQWRLQCIRNNKTIGFVPTMGALHDGHCSLVSQSLSENDGTVVSIFVNPSQFAPHEDLDAYPRTLDGDLKLLSSRFSNVDAVFIPKLSEMFPSGITLDVKEQKGAFVSVLGCSEQLEGVTRPQFFRGVATVVTKLLNAVGPDRVYFGQKDAQQCVVVKNLVKDLLINTEVRVMPTLREQNGLAMSSRNAYLSPQTREESSIIYRALSAGEEYYKNQSLDSVSSSEIKNIINQVLSQNDKFKIDYLAISHPETLQDLQLVERGVGAIISTALKAPKENGDGDARLIDNIILH

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
29 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
30 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
38 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
39 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
40 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
41 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
42 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
54 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
55 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
56 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
57 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
58 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
59 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
60 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
61 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
71 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
85 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
86 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
89 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
90 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
91 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
92 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
93 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
94 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
95 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
96 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
97 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
100 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.69
Metatranscriptomes 0
Isolates 1.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.11
Nodule 0
Rhizoplane 4.58
Rhizosphere 77.12
Stem 0
Stem Tuber 0
Unclassified 1.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10000184 3300005289 Eukaryota 889358
2 SwRhRL2b_contig_2334179 2162886007 Eukaryota 54089
3 JGI25153J46596_10010314 3300003215 Bacteria 4239
4 rootH1_10169354 3300003323 Bacteria 3166
5 Ga0065715_10252770 3300005293 Bacteria 1161
6 Ga0065707_10082006 3300005295 Eukaryota 25346
7 Ga0070658_10033647 3300005327 Bacteria 4124
8 Ga0070658_10122968 3300005327 Bacteria 2157
9 Ga0070670_100372880 3300005331 Bacteria 1256
10 Ga0070666_10282890 3300005335 Bacteria 1179
11 Ga0070661_100084876 3300005344 Bacteria 2339
12 Ga0070659_100207040 3300005366 Bacteria 1616
13 Ga0070709_10023590 3300005434 Unclassified 3616
14 Ga0070709_10083584 3300005434 Bacteria 2088
15 Ga0070698_100179184 3300005471 Unclassified 2058
16 Ga0068852_100041508 3300005616 Bacteria 3888
17 Ga0075365_10071073 3300006038 Bacteria 2342
18 Ga0075365_10283684 3300006038 Bacteria 1165
19 Ga0075368_10063073 3300006042 Bacteria 1486
20 Ga0075364_10037632 3300006051 Bacteria 3133
21 Ga0075364_10114432 3300006051 Bacteria 1802
22 Ga0075364_10212135 3300006051 Bacteria 1313
23 Ga0075366_10263319 3300006195 Bacteria 1052
24 Ga0075433_10323547 3300006852 Bacteria 1364
25 Ga0075436_100127919 3300006914 Bacteria 1780
26 Ga0075436_100194291 3300006914 Bacteria 1436
27 Ga0105240_10000661 3300009093 Bacteria 63392
28 Ga0111539_10265563 3300009094 Bacteria 1998
29 Ga0111539_10934649 3300009094 Bacteria 1008
30 Ga0114129_10011042 3300009147 Bacteria 12864
31 Ga0114129_10145860 3300009147 Bacteria 3242
32 Ga0105238_10641608 3300009551 Bacteria 1072
33 Ga0105239_10306392 3300010375 Bacteria 1789
34 Ga0157373_10016710 3300013100 Bacteria 5348
35 Ga0157373_10381546 3300013100 Bacteria 1008
36 Ga0157374_10000080 3300013296 Bacteria 95624
37 Ga0157377_10363631 3300014745 Bacteria 975
38 Ga0157376_10000594 3300014969 Bacteria 23386
39 Ga0207680_10179210 3300025903 Bacteria 1432
40 Ga0207695_10000738 3300025913 Bacteria 63394
41 Ga0207657_10061420 3300025919 Bacteria 3222
42 Ga0207649_10113665 3300025920 Bacteria 1814
43 Ga0207649_10133663 3300025920 Bacteria 1688
44 Ga0207706_10317553 3300025933 Bacteria 1356
45 Ga0207674_10048565 3300026116 Bacteria 4343
46 Ga0207698_10176272 3300026142 Bacteria 1888
47 Ga0307408_100259977 3300031548 Bacteria 1436
48 Ga0307408_100469344 3300031548 Bacteria 1095
49 Ga0316575_10098535 3300031665 Bacteria 1187
50 Ga0316576_10042287 3300031727 Bacteria 3284
51 Ga0316578_10006481 3300031728 Bacteria 5783
52 Ga0316578_10008665 3300031728 Bacteria 5190
53 Ga0316578_10048807 3300031728 Bacteria 2473
54 Ga0307405_10099622 3300031731 Bacteria 1945
55 Ga0307405_10137744 3300031731 Bacteria 1697
56 Ga0307405_10415253 3300031731 Bacteria 1057
57 Ga0316577_10003748 3300031733 Bacteria 7736
58 Ga0307413_10012943 3300031824 Bacteria 4172
59 Ga0307413_10025542 3300031824 Bacteria 3239
60 Ga0307410_10002208 3300031852 Bacteria 9273
61 Ga0307410_10015011 3300031852 Bacteria 4581
62 Ga0307410_10052040 3300031852 Bacteria 2763
63 Ga0307410_10130386 3300031852 Bacteria 1846
64 Ga0307410_10172136 3300031852 Bacteria 1632
65 Ga0307406_10523641 3300031901 Bacteria 965
66 Ga0307407_10245738 3300031903 Bacteria 1223
67 Ga0307412_10142519 3300031911 Bacteria 1757
68 Ga0307412_10159474 3300031911 Bacteria 1674
69 Ga0307409_100046988 3300031995 Bacteria 3272
70 Ga0307409_100464262 3300031995 Bacteria 1225
71 Ga0307409_100649674 3300031995 Bacteria 1048
72 Ga0307416_100031095 3300032002 Bacteria 4014
73 Ga0307416_100059438 3300032002 Bacteria 3106
74 Ga0307416_100063617 3300032002 Bacteria 3022
75 Ga0307416_100091357 3300032002 Bacteria 2615
76 Ga0307416_100242601 3300032002 Bacteria 1747
77 Ga0307414_10030959 3300032004 Bacteria 3502
78 Ga0307414_10124099 3300032004 Bacteria 1991
79 Ga0307411_10015668 3300032005 Bacteria 4267
80 Ga0307411_10107979 3300032005 Bacteria 1984
81 Ga0307415_100002900 3300032126 Bacteria 8598
82 Ga0307415_100075838 3300032126 Bacteria 2381
83 Ga0307415_100105161 3300032126 Bacteria 2081
84 Ga0307415_100522028 3300032126 Bacteria 1042
85 Ga0316574_0311226 3300035398 Bacteria 1001
86 Ga0316582_0039438 3300036647 Bacteria 2941
87 Ga0395900_0234945 3300037418 Bacteria 1842
88 Ga0400483_008451 3300039062 Bacteria 6931
89 Ga0400483_019089 3300039062 Bacteria 1369
90 Ga0400483_052076 3300039062 Bacteria 1648
91 Ga0400483_094739 3300039062 Bacteria 33419
92 Ga0400483_228778 3300039062 Bacteria 97865
93 Ga0400483_250112 3300039062 Bacteria 3656
94 Ga0400483_256267 3300039062 Bacteria 1305
95 Ga0436361_1197264 3300039447 Bacteria 1125
96 Ga0436362_0738947 3300039453 Bacteria 1765
97 Ga0439453_0001995 3300041408 Bacteria 2744
98 Ga0450905_001363 3300042142 Bacteria 3099
99 Ga0451577_0278989 3300042876 Bacteria 1514
100 Ga0451577_0648456 3300042876 Bacteria 957
101 Ga0453684_0410856 3300044712 Bacteria 1514
102 Ga0453684_0476735 3300044712 Bacteria 1385
103 Ga0451576_0000557 3300045051 Bacteria 79863
104 Ga0451576_0003839 3300045051 Bacteria 20192
105 Ga0451576_0047187 3300045051 Bacteria 4530
106 Ga0451576_0160886 3300045051 Bacteria 2343
107 Ga0466967_0418058 3300045976 Bacteria 1306
108 Ga0495653_0091405 3300046463 Eukaryota 2225
109 Ga0495653_0247324 3300046463 Bacteria 1185
110 Ga0495630_0131001 3300046517 Bacteria 1905
111 Ga0495667_0150483 3300046559 Bacteria 1499
112 Ga0495634_0000045 3300046642 Bacteria 99087
113 Ga0495635_0008968 3300046663 Bacteria 6982
114 Ga0495658_0004191 3300046683 Bacteria 7099
115 Ga0495680_0008573 3300047322 Bacteria 9281
116 Ga0495684_0018565 3300047471 Bacteria 5357
117 Ga0495686_0001990 3300047472 Bacteria 20285
118 Ga0496102_0231554 3300048905 Bacteria 1742
119 Ga0496102_0538914 3300048905 Bacteria 1090
120 Ga0496103_0107391 3300048906 Bacteria 1771
121 Ga0496109_0186698 3300048912 Bacteria 1948
122 Ga0496110_0033010 3300048913 Bacteria 4475
123 Ga0496111_0082461 3300048914 Bacteria 2349
124 Ga0496113_0249891 3300048916 Bacteria 1416
125 Ga0496125_0010612 3300048928 Bacteria 9306
126 Ga0501034_0000967 3300049571 Bacteria 41355
127 Ga0501034_0021633 3300049571 Bacteria 6551
128 Ga0501036_0144351 3300049572 Bacteria 2008
129 Ga0501036_0419472 3300049572 Bacteria 1116
130 Ga0501039_0211105 3300049575 Bacteria 1527
131 Ga0501072_0147598 3300049588 Bacteria 1875
132 Ga0501075_0123834 3300049591 Bacteria 1968
133 Ga0501081_0010893 3300049743 Bacteria 5944
134 Ga0501044_0178845 3300049823 Bacteria 2089
135 nmdc:mga03683_150525_c1 3300050489 Bacteria 1050
136 nmdc:mga00v17_206675_c1 3300050491 Bacteria 1270
137 nmdc:mga00v17_391256_c1 3300050491 Bacteria 904
138 nmdc:mga00v17_52660_c1 3300050491 Bacteria 2477
139 nmdc:mga0yw44_54327_c1 3300050492 Bacteria 2434
140 nmdc:mga0yw44_79425_c1 3300050492 Bacteria 2053
141 nmdc:mga06z11_204031_c1 3300050494 Bacteria 1149
142 nmdc:mga05p37_25861_c1 3300050507 Bacteria 7137
143 nmdc:mga05p37_296864_c1 3300050507 Bacteria 1921
144 nmdc:mga0qj67_250898_c1 3300050509 Bacteria 1436
145 nmdc:mga0a205_101874_c1 3300050515 Bacteria 2770
146 nmdc:mga0a205_155218_c1 3300050515 Unclassified 2187
147 nmdc:mga0sz30_31339_c1 3300050516 Bacteria 2200
148 Ga0500616_0000270 3300053153 Bacteria 77614
149 Ga0501084_0161638 3300054114 Bacteria 1889
150 Ga0501084_0292719 3300054114 Bacteria 1375
151 Ga0501082_0628745 3300060353 Bacteria 939
152 2644197394 2643221635 Bacteria 2632343
153 2740994252 2740891818 Bacteria 6711283
154 Ga0065704_10000184
155 SwRhRL2b_contig_2334179
156 JGI25153J46596_10010314
157 rootH1_10169354
158 Ga0065715_10252770
159 Ga0065707_10082006
160 Ga0070658_10033647
161 Ga0070658_10122968
162 Ga0070670_100372880
163 Ga0070666_10282890
164 Ga0070661_100084876
165 Ga0070659_100207040
166 Ga0070709_10023590
167 Ga0070709_10083584
168 Ga0070698_100179184
169 Ga0068852_100041508
170 Ga0075365_10071073
171 Ga0075365_10283684
172 Ga0075368_10063073
173 Ga0075364_10037632
174 Ga0075364_10114432
175 Ga0075364_10212135
176 Ga0075366_10263319
177 Ga0075433_10323547
178 Ga0075436_100127919
179 Ga0075436_100194291
180 Ga0105240_10000661
181 Ga0111539_10265563
182 Ga0111539_10934649
183 Ga0114129_10011042
184 Ga0114129_10145860
185 Ga0105238_10641608
186 Ga0105239_10306392
187 Ga0157373_10016710
188 Ga0157373_10381546
189 Ga0157374_10000080
190 Ga0157377_10363631
191 Ga0157376_10000594
192 Ga0207680_10179210
193 Ga0207695_10000738
194 Ga0207657_10061420
195 Ga0207649_10113665
196 Ga0207649_10133663
197 Ga0207706_10317553
198 Ga0207674_10048565
199 Ga0207698_10176272
200 Ga0307408_100259977
201 Ga0307408_100469344
202 Ga0316575_10098535
203 Ga0316576_10042287
204 Ga0316578_10006481
205 Ga0316578_10008665
206 Ga0316578_10048807
207 Ga0307405_10099622
208 Ga0307405_10137744
209 Ga0307405_10415253
210 Ga0316577_10003748
211 Ga0307413_10012943
212 Ga0307413_10025542
213 Ga0307410_10002208
214 Ga0307410_10015011
215 Ga0307410_10052040
216 Ga0307410_10130386
217 Ga0307410_10172136
218 Ga0307406_10523641
219 Ga0307407_10245738
220 Ga0307412_10142519
221 Ga0307412_10159474
222 Ga0307409_100046988
223 Ga0307409_100464262
224 Ga0307409_100649674
225 Ga0307416_100031095
226 Ga0307416_100059438
227 Ga0307416_100063617
228 Ga0307416_100091357
229 Ga0307416_100242601
230 Ga0307414_10030959
231 Ga0307414_10124099
232 Ga0307411_10015668
233 Ga0307411_10107979
234 Ga0307415_100002900
235 Ga0307415_100075838
236 Ga0307415_100105161
237 Ga0307415_100522028
238 Ga0316574_0311226
239 Ga0316582_0039438
240 Ga0395900_0234945
241 Ga0400483_008451
242 Ga0400483_019089
243 Ga0400483_052076
244 Ga0400483_094739
245 Ga0400483_228778
246 Ga0400483_250112
247 Ga0400483_256267
248 Ga0436361_1197264
249 Ga0436362_0738947
250 Ga0439453_0001995
251 Ga0450905_001363
252 Ga0451577_0278989
253 Ga0451577_0648456
254 Ga0453684_0410856
255 Ga0453684_0476735
256 Ga0451576_0000557
257 Ga0451576_0003839
258 Ga0451576_0047187
259 Ga0451576_0160886
260 Ga0466967_0418058
261 Ga0495653_0091405
262 Ga0495653_0247324
263 Ga0495630_0131001
264 Ga0495667_0150483
265 Ga0495634_0000045
266 Ga0495635_0008968
267 Ga0495658_0004191
268 Ga0495680_0008573
269 Ga0495684_0018565
270 Ga0495686_0001990
271 Ga0496102_0231554
272 Ga0496102_0538914
273 Ga0496103_0107391
274 Ga0496109_0186698
275 Ga0496110_0033010
276 Ga0496111_0082461
277 Ga0496113_0249891
278 Ga0496125_0010612
279 Ga0501034_0000967
280 Ga0501034_0021633
281 Ga0501036_0144351
282 Ga0501036_0419472
283 Ga0501039_0211105
284 Ga0501072_0147598
285 Ga0501075_0123834
286 Ga0501081_0010893
287 Ga0501044_0178845
288 nmdc:mga03683_150525_c1
289 nmdc:mga00v17_206675_c1
290 nmdc:mga00v17_391256_c1
291 nmdc:mga00v17_52660_c1
292 nmdc:mga0yw44_54327_c1
293 nmdc:mga0yw44_79425_c1
294 nmdc:mga06z11_204031_c1
295 nmdc:mga05p37_25861_c1
296 nmdc:mga05p37_296864_c1
297 nmdc:mga0qj67_250898_c1
298 nmdc:mga0a205_101874_c1
299 nmdc:mga0a205_155218_c1
300 nmdc:mga0sz30_31339_c1
301 Ga0500616_0000270
302 Ga0501084_0161638
303 Ga0501084_0292719
304 Ga0501082_0628745
305 2644197394
306 2740994252

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02569

Pantoate_ligase

Pantoate-beta-alanine ligase

8

305

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3guz-assembly1.cif.gz_A structural and substrate-binding studies of pantothenate synthenate (ps)provide insights into homotropic inhibition by pantoate in ps's 0.9565 7 190
2ejc-assembly1.cif.gz_A-2 crystal structure of pantoate--beta-alanine ligase (panc) from thermotoga maritima 0.952 7 307
4ddh-assembly1.cif.gz_B pantothenate synthetase in complex with 6-methoxy-1-benzofuran-3-yl acetic acid 0.9519 6 307
3inn-assembly1.cif.gz_A crystal structure of pantoate-beta-alanine-ligase in complex with atp at low occupancy at 2.1 a resolution 0.9514 6 306
3imc-assembly2.cif.gz_B-2 crystal structure of mycobacterium tuberculosis pantothenate synthetase at 1.6 ang resolution in complex with fragment compound 5-methoxyindole, sulfate and glycerol 0.9509 6 307
ID Description Score Start End Superfamily
3innA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9575 8 193 3.40.50.620
3innA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9523 8 193 3.40.50.620
af_P40459_1_188_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9515 7 193 3.40.50.620
3imeB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9508 6 190 3.40.50.620
af_P40459_1_188_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9417 7 193 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A1Y1X897-F1-model_v4 Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantoate-activating enzyme) (Pantothenate synthetase) 0.9712 7 306 GO:0004592
GO:0005524
GO:0015940
AF-A0A3M1KTG1-F1-model_v4 Pantothenate synthetase (PS) (EC 6.3.2.1) (Pantoate--beta-alanine ligase) (Pantoate-activating enzyme) 0.9672 7 304 GO:0004592
GO:0005524
GO:0005829
GO:0015940
AF-A0A1B6NQT8-F1-model_v4 pantoate--beta-alanine ligase (AMP-forming) (EC 6.3.2.1) (Pantoate-activating enzyme) 0.9667 7 232 GO:0004592
GO:0005524
GO:0005829
GO:0015940
AF-A0A507C6W4-F1-model_v4 Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantoate-activating enzyme) (Pantothenate synthetase) 0.9666 1 306 GO:0004592
GO:0005524
GO:0015940
AF-A0A838GX08-F1-model_v4 deleted 0.9664 141 306

Map