F215520

General Info

Members Datasets Scaffolds Average Seq Length
152 110 304 445

Family's Representative Sequence

Representative Sequence 3300049823|Ga0501044_0069199|Ga0501044_0069199_894_2264
Length 456
Sequence MRYLPLTEEDRRAMLARIGVPSVDSLYRDVPAGALLKEPVDLPRHAGELEVERTIGAMAAKNLGTSAVPSFLGAGAYRHHVPASVDHLIQRGEFLTSYTPYQPEVTQGTLQVLFEFQTQVALLTGMDVANASMYDGATATVEAVMMANRVTRRKKALVSGSLHPHYREVIETYGHHTGFTVESAPYDPEGREDILAKVDKDTSCVVIQNPSFFGHLVDFEALCDAAHAAGALVIAVTTEAVSYGLIRAPGNTGCDVAVAEGQSFGNPLGFGGPYVGLFACKEKFLRQIPGRLAGQTVDVDGKRGWVLTLSTREQHIRREKATSNICTNSGLCALAFTIHLTLLGEAGLQRLAELNHATASNLADRLTGISGVKLLNETFFNEFTLALPKPAAPVVEAMAKRRVLGGVPVSRLVPPNGPNGDPKLANLLLVAATETVTEADMAALETALKESLAEVK

Samples

Sample ID Description Type Environment
1 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
28 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
31 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
40 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
44 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
51 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
52 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
58 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
59 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
60 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
66 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
67 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
68 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
69 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
70 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
83 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
84 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
90 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
98 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
99 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
100 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
101 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
102 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
103 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
104 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
107 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
110 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.87
Nodule 0
Rhizoplane 0.66
Rhizosphere 83.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501044_0069199 3300049823 Bacteria 3594
2 JGI25153J46596_10000145 3300003215 Bacteria 72113
3 Ga0055531_10004807 3300003794 Bacteria 8067
4 Ga0070680_100008094 3300005336 Bacteria 8024
5 Ga0070668_100005927 3300005347 Bacteria 9057
6 Ga0070713_100147333 3300005436 Bacteria 2091
7 Ga0070708_100199915 3300005445 Bacteria 1871
8 Ga0070681_10016123 3300005458 Bacteria 7449
9 Ga0070679_100004981 3300005530 Bacteria 12260
10 Ga0070697_100161174 3300005536 Bacteria 1895
11 Ga0070696_100129181 3300005546 Bacteria 1837
12 Ga0070696_100153154 3300005546 Bacteria 1694
13 Ga0070704_100049539 3300005549 Bacteria 2947
14 Ga0068856_100198442 3300005614 Bacteria 2021
15 Ga0081538_10031542 3300005981 Bacteria 3571
16 Ga0081540_1037858 3300005983 Bacteria 2551
17 Ga0070717_10049661 3300006028 Bacteria 3444
18 Ga0070717_10130118 3300006028 Bacteria 2164
19 Ga0070712_100054118 3300006175 Bacteria 2804
20 Ga0075430_100126572 3300006846 Bacteria 2130
21 Ga0075433_10173755 3300006852 Bacteria 1917
22 Ga0075434_100041181 3300006871 Bacteria 4576
23 Ga0111539_10001101 3300009094 Bacteria 35675
24 Ga0114129_10062184 3300009147 Bacteria 5216
25 Ga0105237_10348241 3300009545 Bacteria 1486
26 Ga0105238_10022566 3300009551 Bacteria 6415
27 Ga0157370_10004994 3300013104 Bacteria 15007
28 Ga0157380_10149018 3300014326 Bacteria 2020
29 Ga0213873_10023190 3300021358 Bacteria 1477
30 Ga0213872_10001728 3300021361 Bacteria 13734
31 Ga0213872_10006973 3300021361 Bacteria 5605
32 Ga0213872_10007674 3300021361 Bacteria 5283
33 Ga0213872_10009105 3300021361 Bacteria 4772
34 Ga0213875_10000157 3300021388 Bacteria 71961
35 Ga0213875_10003858 3300021388 Bacteria 8407
36 Ga0209758_1000060 3300025297 Bacteria 324326
37 Ga0209257_1001302 3300025304 Bacteria 30372
38 Ga0207671_10165729 3300025914 Bacteria 1713
39 Ga0207693_10025080 3300025915 Bacteria 4730
40 Ga0207693_10049042 3300025915 Bacteria 3316
41 Ga0207663_10063705 3300025916 Bacteria 2349
42 Ga0207660_10016467 3300025917 Bacteria 4894
43 Ga0207652_10005250 3300025921 Bacteria 10526
44 Ga0207700_10120238 3300025928 Bacteria 2129
45 Ga0207661_10198919 3300025944 Bacteria 1761
46 Ga0207428_10000098 3300027907 Bacteria 120181
47 Ga0268265_10003084 3300028380 Bacteria 12164
48 Ga0307517_10100498 3300028786 Bacteria 2284
49 Ga0265320_10005956 3300031240 Bacteria 7749
50 Ga0265340_10045099 3300031247 Bacteria 2155
51 Ga0265331_10002193 3300031250 Bacteria 13406
52 Ga0265316_10010329 3300031344 Bacteria 8518
53 Ga0265313_10000138 3300031595 Bacteria 75121
54 Ga0265313_10000308 3300031595 Bacteria 53080
55 Ga0265313_10008173 3300031595 Bacteria 6993
56 Ga0265314_10009562 3300031711 Bacteria 8168
57 Ga0265314_10019409 3300031711 Bacteria 5268
58 Ga0265314_10058915 3300031711 Bacteria 2630
59 Ga0265342_10017992 3300031712 Bacteria 4588
60 Ga0307413_10029484 3300031824 Bacteria 3070
61 Ga0307409_100025194 3300031995 Bacteria 4167
62 Ga0373957_0007912 3300035120 Bacteria 3421
63 Ga0373955_0018335 3300035172 Bacteria 3479
64 Ga0373937_0146814 3300036401 Bacteria 2208
65 Ga0395900_0279205 3300037418 Bacteria 1663
66 Ga0436364_1051921 3300037853 Bacteria 4822
67 Ga0436364_1125036 3300037853 Bacteria 39298
68 Ga0436364_1195444 3300037853 Bacteria 3764
69 Ga0436365_1073988 3300039437 Bacteria 1990
70 Ga0436360_0608162 3300039438 Bacteria 3141
71 Ga0436360_1169293 3300039438 Bacteria 5021
72 Ga0436361_0111171 3300039447 Bacteria 1650
73 Ga0436361_0219080 3300039447 Bacteria 2661
74 Ga0436361_0242404 3300039447 Bacteria 5047
75 Ga0436361_0468477 3300039447 Bacteria 4703
76 Ga0436361_0596455 3300039447 Bacteria 3767
77 Ga0436361_0623371 3300039447 Bacteria 9164
78 Ga0436361_0762212 3300039447 Bacteria 2022
79 Ga0436361_1016392 3300039447 Bacteria 38752
80 Ga0436361_1019185 3300039447 Bacteria 2699
81 Ga0436361_1036291 3300039447 Bacteria 1441
82 Ga0436363_0619116 3300039450 Bacteria 2424
83 Ga0436363_1539596 3300039450 Bacteria 2190
84 Ga0436362_1155556 3300039453 Bacteria 2574
85 Ga0436362_1160643 3300039453 Bacteria 1936
86 Ga0466966_0058297 3300044684 Bacteria 2441
87 Ga0453684_0000204 3300044712 Bacteria 258105
88 Ga0466957_0004265 3300044842 Bacteria 7926
89 Ga0451576_0241521 3300045051 Bacteria 1887
90 Ga0466958_0000187 3300045836 Bacteria 22479
91 Ga0495586_0088201 3300046535 Bacteria 1711
92 Ga0495635_0016709 3300046663 Bacteria 5126
93 Ga0495599_0019795 3300046678 Bacteria 4192
94 Ga0496113_0036629 3300048916 Bacteria 3596
95 Ga0501032_0008177 3300049569 Bacteria 7627
96 Ga0501033_0001846 3300049570 Bacteria 18437
97 Ga0501034_0023017 3300049571 Bacteria 6349
98 Ga0501034_0127227 3300049571 Bacteria 2532
99 Ga0501036_0010492 3300049572 Bacteria 7654
100 Ga0501036_0221858 3300049572 Bacteria 1587
101 Ga0501037_0001194 3300049573 Bacteria 19180
102 Ga0501038_0000615 3300049574 Bacteria 31769
103 Ga0501039_0003515 3300049575 Bacteria 11732
104 Ga0501041_0049331 3300049577 Bacteria 2564
105 Ga0501043_0002235 3300049579 Bacteria 16491
106 Ga0501046_0002184 3300049580 Bacteria 18468
107 Ga0501046_0187061 3300049580 Bacteria 1546
108 Ga0501047_0017073 3300049581 Bacteria 6941
109 Ga0501047_0025588 3300049581 Bacteria 5674
110 Ga0501047_0113631 3300049581 Bacteria 2590
111 Ga0501048_0024431 3300049582 Bacteria 4411
112 Ga0501067_0017673 3300049583 Bacteria 3948
113 Ga0501068_0017929 3300049584 Bacteria 4098
114 Ga0501069_0000395 3300049585 Bacteria 19769
115 Ga0501070_0001040 3300049586 Bacteria 24987
116 Ga0501071_0018571 3300049587 Bacteria 4817
117 Ga0501073_0013487 3300049589 Bacteria 5943
118 Ga0501073_0074825 3300049589 Bacteria 2358
119 Ga0501074_0003380 3300049590 Bacteria 11305
120 Ga0501076_0011306 3300049592 Bacteria 6644
121 Ga0501077_0091604 3300049593 Bacteria 1926
122 Ga0501080_0004631 3300049742 Bacteria 12256
123 Ga0501080_0037330 3300049742 Bacteria 4537
124 Ga0501080_0042588 3300049742 Bacteria 4227
125 Ga0501081_0037297 3300049743 Bacteria 3316
126 Ga0501083_0004995 3300049744 Bacteria 9396
127 Ga0501083_0023639 3300049744 Bacteria 4261
128 Ga0501083_0074758 3300049744 Bacteria 2251
129 Ga0501035_0004432 3300049822 Bacteria 13326
130 Ga0501044_0010291 3300049823 Bacteria 10159
131 Ga0501044_0011184 3300049823 Bacteria 9733
132 Ga0501044_0111380 3300049823 Bacteria 2745
133 nmdc:mga05p37_204491_c1 3300050507 Bacteria 2389
134 nmdc:mga05p37_283813_c1 3300050507 Bacteria 1973
135 nmdc:mga08y16_385_c1 3300050511 Bacteria 40429
136 Ga0495595_0010674 3300053084 Bacteria 3824
137 Ga0495595_0013652 3300053084 Bacteria 3434
138 Ga0500578_0144136 3300053086 Bacteria 1488
139 Ga0500651_0014565 3300053093 Bacteria 4812
140 Ga0500555_006912 3300053103 Bacteria 3226
141 Ga0500595_001935 3300053119 Bacteria 10659
142 Ga0500642_0003059 3300053130 Bacteria 5000
143 Ga0500568_0035515 3300053139 Bacteria 2033
144 Ga0500588_0019431 3300053146 Bacteria 1806
145 Ga0500616_0006273 3300053153 Bacteria 7822
146 Ga0500616_0092923 3300053153 Bacteria 1490
147 Ga0500622_0076441 3300053156 Bacteria 1684
148 Ga0500609_001383 3300053731 Bacteria 3553
149 Ga0501082_0001815 3300060353 Bacteria 18801
150 Ga0501082_0024553 3300060353 Bacteria 5196
151 2883292691 2883291878 Bacteria 5894118
152 2883355659 2883354860 Bacteria 5865246
153 Ga0501044_0069199
154 JGI25153J46596_10000145
155 Ga0055531_10004807
156 Ga0070680_100008094
157 Ga0070668_100005927
158 Ga0070713_100147333
159 Ga0070708_100199915
160 Ga0070681_10016123
161 Ga0070679_100004981
162 Ga0070697_100161174
163 Ga0070696_100129181
164 Ga0070696_100153154
165 Ga0070704_100049539
166 Ga0068856_100198442
167 Ga0081538_10031542
168 Ga0081540_1037858
169 Ga0070717_10049661
170 Ga0070717_10130118
171 Ga0070712_100054118
172 Ga0075430_100126572
173 Ga0075433_10173755
174 Ga0075434_100041181
175 Ga0111539_10001101
176 Ga0114129_10062184
177 Ga0105237_10348241
178 Ga0105238_10022566
179 Ga0157370_10004994
180 Ga0157380_10149018
181 Ga0213873_10023190
182 Ga0213872_10001728
183 Ga0213872_10006973
184 Ga0213872_10007674
185 Ga0213872_10009105
186 Ga0213875_10000157
187 Ga0213875_10003858
188 Ga0209758_1000060
189 Ga0209257_1001302
190 Ga0207671_10165729
191 Ga0207693_10025080
192 Ga0207693_10049042
193 Ga0207663_10063705
194 Ga0207660_10016467
195 Ga0207652_10005250
196 Ga0207700_10120238
197 Ga0207661_10198919
198 Ga0207428_10000098
199 Ga0268265_10003084
200 Ga0307517_10100498
201 Ga0265320_10005956
202 Ga0265340_10045099
203 Ga0265331_10002193
204 Ga0265316_10010329
205 Ga0265313_10000138
206 Ga0265313_10000308
207 Ga0265313_10008173
208 Ga0265314_10009562
209 Ga0265314_10019409
210 Ga0265314_10058915
211 Ga0265342_10017992
212 Ga0307413_10029484
213 Ga0307409_100025194
214 Ga0373957_0007912
215 Ga0373955_0018335
216 Ga0373937_0146814
217 Ga0395900_0279205
218 Ga0436364_1051921
219 Ga0436364_1125036
220 Ga0436364_1195444
221 Ga0436365_1073988
222 Ga0436360_0608162
223 Ga0436360_1169293
224 Ga0436361_0111171
225 Ga0436361_0219080
226 Ga0436361_0242404
227 Ga0436361_0468477
228 Ga0436361_0596455
229 Ga0436361_0623371
230 Ga0436361_0762212
231 Ga0436361_1016392
232 Ga0436361_1019185
233 Ga0436361_1036291
234 Ga0436363_0619116
235 Ga0436363_1539596
236 Ga0436362_1155556
237 Ga0436362_1160643
238 Ga0466966_0058297
239 Ga0453684_0000204
240 Ga0466957_0004265
241 Ga0451576_0241521
242 Ga0466958_0000187
243 Ga0495586_0088201
244 Ga0495635_0016709
245 Ga0495599_0019795
246 Ga0496113_0036629
247 Ga0501032_0008177
248 Ga0501033_0001846
249 Ga0501034_0023017
250 Ga0501034_0127227
251 Ga0501036_0010492
252 Ga0501036_0221858
253 Ga0501037_0001194
254 Ga0501038_0000615
255 Ga0501039_0003515
256 Ga0501041_0049331
257 Ga0501043_0002235
258 Ga0501046_0002184
259 Ga0501046_0187061
260 Ga0501047_0017073
261 Ga0501047_0025588
262 Ga0501047_0113631
263 Ga0501048_0024431
264 Ga0501067_0017673
265 Ga0501068_0017929
266 Ga0501069_0000395
267 Ga0501070_0001040
268 Ga0501071_0018571
269 Ga0501073_0013487
270 Ga0501073_0074825
271 Ga0501074_0003380
272 Ga0501076_0011306
273 Ga0501077_0091604
274 Ga0501080_0004631
275 Ga0501080_0037330
276 Ga0501080_0042588
277 Ga0501081_0037297
278 Ga0501083_0004995
279 Ga0501083_0023639
280 Ga0501083_0074758
281 Ga0501035_0004432
282 Ga0501044_0010291
283 Ga0501044_0011184
284 Ga0501044_0111380
285 nmdc:mga05p37_204491_c1
286 nmdc:mga05p37_283813_c1
287 nmdc:mga08y16_385_c1
288 Ga0495595_0010674
289 Ga0495595_0013652
290 Ga0500578_0144136
291 Ga0500651_0014565
292 Ga0500555_006912
293 Ga0500595_001935
294 Ga0500642_0003059
295 Ga0500568_0035515
296 Ga0500588_0019431
297 Ga0500616_0006273
298 Ga0500616_0092923
299 Ga0500622_0076441
300 Ga0500609_001383
301 Ga0501082_0001815
302 Ga0501082_0024553
303 2883292691
304 2883355659

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02347

GDC-P

Glycine cleavage system P-protein

1

448

0.93

PF00266

Aminotran_5

Aminotransferase class-V

101

382

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pzy-assembly1.cif.gz_AD structure of the vacant candida albicans 80s ribosome 0.7543 141 184
3wgc-assembly1.cif.gz_D aeromonas jandaei l-allo-threonine aldolase h128y/s292r double mutant 0.6899 135 444
1jg8-assembly1.cif.gz_A crystal structure of threonine aldolase (low-specificity) 0.6803 139 444
4l0o-assembly3.cif.gz_K-4 structure determination of cystathionine gamma-synthase from helicobacter pylori 0.6629 139 449
1wyv-assembly1.cif.gz_C crystal structure of glycine decarboxylase (p-protein) of the glycine cleavage system, in inhibitor-bound form 0.6602 1 445
ID Description Score Start End Superfamily
1wytA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8588 346 445 3.90.1150.10
1wyuB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8479 351 450 3.90.1150.10
2dr1B01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8166 350 448 3.90.1150.10
1v72A01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8047 350 445 3.90.1150.10
af_F1QQP7_432_529_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.7994 353 444 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A833G3H8-F1-model_v4 Glycine dehydrogenase 0.9924 358 446
AF-A0A4Q6BH19-F1-model_v4 Glycine dehydrogenase 0.965 360 447
AF-A0A833G3H8-F1-model_v4 Glycine dehydrogenase 0.9603 358 446
AF-A0A7R9N040-F1-model_v4 deleted 0.9597 350 446
AF-A0A831YSH6-F1-model_v4 Glycine dehydrogenase 0.9575 342 448 GO:0004375
GO:0009116

Map