F213927

General Info

Members Datasets Scaffolds Average Seq Length
152 109 304 563

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10000894|Ga0081539_1000089438
Length 598
Sequence MKTISPASSPEDDAKKMEETLNEPKRKKTAEELRSHRWLGVSDLRSFSHRSRAKQMGYGREDYAGKPVIAIINTWSDLTTCHSHFRERAEEVKRGVWQAGGFPLEIPAMPVNETFMKPSPMMYRNLLAMEVEELLRCQPIDGVVLMGGCDKTTPGLLMGAISINLPTIYLTAGPMLRGNWNGQILGSGSDVWKYWAEKCAGNITDTEWNEMEDGIARSPGHCMTMGTASTMTSIAETLGFTLPGASSIPAVDANHSRMAASCGRRIVEAVWEDLKPSDILTMKSFENAITADMAIGGSTNAIIHLVAIAGRVGIKLDLKKFDEISQRTPMIANIRPSGQFLMEDFYYAGGLRALLWQIRELLNLDCITVNGKAIGENIADAKIHHPDVIRSLENPVAPQGGTAILYGNLAPNGAVIKPTAAESRLLQHTGPAVVFKNYNDMAARIDDENLVVDENSVIVLQNAGPLGGPGMPEWGMLPIPKKLLKKGIRDMVRISDARMSGTAYGACVLHVSPESYIGGPLAFVRDGDLIELDVPGRKLHLHVTDAELAKRRAAWVEPERHYRRGFGALFSQHVTQADEGCDFDFLLSGAETPEPEIH

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
87 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
88 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
109 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.68
Metatranscriptomes 0
Isolates 1.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.32
Rhizosphere 95.39
Stem 0
Stem Tuber 0
Unclassified 2.63

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10000894 3300005985 Bacteria 56997
2 Ga0065707_10089147 3300005295 Bacteria 4453
3 Ga0070670_100003149 3300005331 Bacteria 13643
4 Ga0070670_100042437 3300005331 Bacteria 3910
5 Ga0068869_100034066 3300005334 Bacteria 3600
6 Ga0070660_100156130 3300005339 Unclassified 1836
7 Ga0070689_100054476 3300005340 Bacteria 3097
8 Ga0070668_100013383 3300005347 Bacteria 6121
9 Ga0070668_100041911 3300005347 Bacteria 3508
10 Ga0070669_100001943 3300005353 Bacteria 14922
11 Ga0070675_100056327 3300005354 Bacteria 3239
12 Ga0070671_100109259 3300005355 Bacteria 2322
13 Ga0070673_100020373 3300005364 Bacteria 4783
14 Ga0070694_100003633 3300005444 Bacteria 9211
15 Ga0070694_100020250 3300005444 Bacteria 4238
16 Ga0070708_100000865 3300005445 Bacteria 22857
17 Ga0070681_10004012 3300005458 Bacteria 13891
18 Ga0070706_100000137 3300005467 Bacteria 91778
19 Ga0070707_100000037 3300005468 Bacteria 114708
20 Ga0070698_100039995 3300005471 Bacteria 4821
21 Ga0070698_100139743 3300005471 Bacteria 2374
22 Ga0070699_100022506 3300005518 Bacteria 5432
23 Ga0070699_100080880 3300005518 Bacteria 2832
24 Ga0070679_100009216 3300005530 Bacteria 9327
25 Ga0070679_100029999 3300005530 Bacteria 5366
26 Ga0070679_100198784 3300005530 Unclassified 1971
27 Ga0070697_100000102 3300005536 Bacteria 70177
28 Ga0070697_100016181 3300005536 Bacteria 5864
29 Ga0070672_100004619 3300005543 Bacteria 9019
30 Ga0070672_100132369 3300005543 Bacteria 2051
31 Ga0070686_100014886 3300005544 Bacteria 4492
32 Ga0070704_100043398 3300005549 Bacteria 3117
33 Ga0070664_100092978 3300005564 Unclassified 2612
34 Ga0068859_100055094 3300005617 Bacteria 4001
35 Ga0068859_100076935 3300005617 Bacteria 3377
36 Ga0068864_100001206 3300005618 Bacteria 21457
37 Ga0068864_100011493 3300005618 Bacteria 7312
38 Ga0068864_100011871 3300005618 Bacteria 7193
39 Ga0068863_100009686 3300005841 Bacteria 9399
40 Ga0068863_100046499 3300005841 Bacteria 4119
41 Ga0068860_100007432 3300005843 Bacteria 10958
42 Ga0068860_100022981 3300005843 Bacteria 6030
43 Ga0068860_100025164 3300005843 Bacteria 5744
44 Ga0068862_100026440 3300005844 Bacteria 4877
45 Ga0068862_100083514 3300005844 Bacteria 2773
46 Ga0081455_10030786 3300005937 Bacteria 4869
47 Ga0068871_100029683 3300006358 Bacteria 4297
48 Ga0075428_100054256 3300006844 Bacteria 4392
49 Ga0075430_100027577 3300006846 Bacteria 4825
50 Ga0075430_100126651 3300006846 Bacteria 2129
51 Ga0075431_100110029 3300006847 Bacteria 2844
52 Ga0075429_100062996 3300006880 Bacteria 3231
53 Ga0097620_100055089 3300006931 Bacteria 4001
54 Ga0097620_100076928 3300006931 Bacteria 3377
55 Ga0075435_100091600 3300007076 Bacteria 2509
56 Ga0105240_10017665 3300009093 Bacteria 9605
57 Ga0111539_10006080 3300009094 Bacteria 15586
58 Ga0111539_10025629 3300009094 Bacteria 7226
59 Ga0111539_10041304 3300009094 Bacteria 5546
60 Ga0111539_10126121 3300009094 Bacteria 2999
61 Ga0114129_10108189 3300009147 Bacteria 3839
62 Ga0114129_10332203 3300009147 Bacteria 2018
63 Ga0105243_10000187 3300009148 Bacteria 72048
64 Ga0105243_10036041 3300009148 Bacteria 3837
65 Ga0105242_10000008 3300009176 Bacteria 172348
66 Ga0105248_10004972 3300009177 Bacteria 14692
67 Ga0157370_10015986 3300013104 Bacteria 7613
68 Ga0157374_10007248 3300013296 Bacteria 9446
69 Ga0157378_10002134 3300013297 Bacteria 17569
70 Ga0157378_10072281 3300013297 Bacteria 3099
71 Ga0163162_10002738 3300013306 Bacteria 16735
72 Ga0163162_10002798 3300013306 Bacteria 16586
73 Ga0163163_10004532 3300014325 Bacteria 11861
74 Ga0163163_10107759 3300014325 Unclassified 2813
75 Ga0157380_10009094 3300014326 Bacteria 7100
76 Ga0213876_10007754 3300021384 Bacteria 5827
77 Ga0207684_10000415 3300025910 Bacteria 57118
78 Ga0207684_10070627 3300025910 Bacteria 2968
79 Ga0207707_10000007 3300025912 Bacteria 368555
80 Ga0207707_10013931 3300025912 Bacteria 7012
81 Ga0207695_10019843 3300025913 Bacteria 7726
82 Ga0207660_10003984 3300025917 Bacteria 9627
83 Ga0207657_10028305 3300025919 Bacteria 5114
84 Ga0207657_10134743 3300025919 Bacteria 2022
85 Ga0207652_10001408 3300025921 Bacteria 21345
86 Ga0207652_10020995 3300025921 Bacteria 5387
87 Ga0207646_10000106 3300025922 Bacteria 114093
88 Ga0207681_10005342 3300025923 Bacteria 7892
89 Ga0207650_10001986 3300025925 Bacteria 14342
90 Ga0207650_10029632 3300025925 Bacteria 3936
91 Ga0207644_10004746 3300025931 Bacteria 8835
92 Ga0207686_10000023 3300025934 Bacteria 172422
93 Ga0207709_10000062 3300025935 Bacteria 194534
94 Ga0207709_10011605 3300025935 Bacteria 4858
95 Ga0207691_10060268 3300025940 Bacteria 3448
96 Ga0207711_10131035 3300025941 Bacteria 2248
97 Ga0207668_10013825 3300025972 Bacteria 4983
98 Ga0207677_10043952 3300026023 Bacteria 2973
99 Ga0207677_10047706 3300026023 Bacteria 2878
100 Ga0207703_10043192 3300026035 Bacteria 3617
101 Ga0207708_10012955 3300026075 Bacteria 6218
102 Ga0207708_10027689 3300026075 Bacteria 4292
103 Ga0207676_10002290 3300026095 Bacteria 13737
104 Ga0207676_10083379 3300026095 Bacteria 2603
105 Ga0207674_10002475 3300026116 Bacteria 23302
106 Ga0207674_10009433 3300026116 Bacteria 11149
107 Ga0209974_10000163 3300027876 Bacteria 20307
108 Ga0207428_10012956 3300027907 Bacteria 7307
109 Ga0207428_10065547 3300027907 Bacteria 2865
110 Ga0268265_10026365 3300028380 Bacteria 4135
111 Ga0268264_10112706 3300028381 Bacteria 2385
112 Ga0268264_10131275 3300028381 Bacteria 2221
113 Ga0316576_10005160 3300031727 Bacteria 7934
114 Ga0373954_0000357 3300035118 Bacteria 16898
115 Ga0316574_0001607 3300035398 Bacteria 10835
116 Ga0373935_0005857 3300035692 Bacteria 7280
117 Ga0373927_0002857 3300035695 Bacteria 12579
118 Ga0373947_0011971 3300035725 Bacteria 4970
119 Ga0373937_0000605 3300036401 Bacteria 31687
120 Ga0373925_0000641 3300037068 Bacteria 32911
121 Ga0436365_1020102 3300039437 Bacteria 14588
122 Ga0436365_1074430 3300039437 Bacteria 14678
123 Ga0436361_0351327 3300039447 Bacteria 31675
124 Ga0466957_0061698 3300044842 Bacteria 2302
125 Ga0495587_0097096 3300046536 Bacteria 1699
126 Ga0495621_0022859 3300046539 Bacteria 2077
127 Ga0496111_0107623 3300048914 Bacteria 2053
128 Ga0496112_0097947 3300048915 Bacteria 2902
129 Ga0501034_0018725 3300049571 Bacteria 7096
130 Ga0501039_0002507 3300049575 Bacteria 13682
131 Ga0501040_0010578 3300049576 Bacteria 6033
132 Ga0501047_0072622 3300049581 Bacteria 3312
133 Ga0501070_0093820 3300049586 Bacteria 2483
134 Ga0501070_0103155 3300049586 Bacteria 2359
135 Ga0501071_0000476 3300049587 Bacteria 20204
136 Ga0501073_0001733 3300049589 Bacteria 16214
137 Ga0501075_0018055 3300049591 Bacteria 5099
138 Ga0501081_0002173 3300049743 Bacteria 12317
139 Ga0501083_0000105 3300049744 Bacteria 56997
140 Ga0501035_0130619 3300049822 Bacteria 2190
141 Ga0501044_0009196 3300049823 Bacteria 10792
142 nmdc:mga09592_27709_c1 3300050508 Bacteria 3289
143 nmdc:mga0qj67_7008_c1 3300050509 Bacteria 8306
144 nmdc:mga06r32_98724_c1 3300050510 Bacteria 2863
145 nmdc:mga08y16_10343_c1 3300050511 Bacteria 9793
146 nmdc:mga08y16_17870_c1 3300050511 Bacteria 7471
147 nmdc:mga08y16_183838_c1 3300050511 Bacteria 2170
148 Ga0501084_0001717 3300054114 Bacteria 17403
149 Ga0501082_0001282 3300060353 Bacteria 22071
150 Ga0501082_0003846 3300060353 Bacteria 13129
151 2866552711 2866552031 Bacteria 5824618
152 2996341413 2996336353 Bacteria 5511628
153 Ga0081539_10000894
154 Ga0065707_10089147
155 Ga0070670_100003149
156 Ga0070670_100042437
157 Ga0068869_100034066
158 Ga0070660_100156130
159 Ga0070689_100054476
160 Ga0070668_100013383
161 Ga0070668_100041911
162 Ga0070669_100001943
163 Ga0070675_100056327
164 Ga0070671_100109259
165 Ga0070673_100020373
166 Ga0070694_100003633
167 Ga0070694_100020250
168 Ga0070708_100000865
169 Ga0070681_10004012
170 Ga0070706_100000137
171 Ga0070707_100000037
172 Ga0070698_100039995
173 Ga0070698_100139743
174 Ga0070699_100022506
175 Ga0070699_100080880
176 Ga0070679_100009216
177 Ga0070679_100029999
178 Ga0070679_100198784
179 Ga0070697_100000102
180 Ga0070697_100016181
181 Ga0070672_100004619
182 Ga0070672_100132369
183 Ga0070686_100014886
184 Ga0070704_100043398
185 Ga0070664_100092978
186 Ga0068859_100055094
187 Ga0068859_100076935
188 Ga0068864_100001206
189 Ga0068864_100011493
190 Ga0068864_100011871
191 Ga0068863_100009686
192 Ga0068863_100046499
193 Ga0068860_100007432
194 Ga0068860_100022981
195 Ga0068860_100025164
196 Ga0068862_100026440
197 Ga0068862_100083514
198 Ga0081455_10030786
199 Ga0068871_100029683
200 Ga0075428_100054256
201 Ga0075430_100027577
202 Ga0075430_100126651
203 Ga0075431_100110029
204 Ga0075429_100062996
205 Ga0097620_100055089
206 Ga0097620_100076928
207 Ga0075435_100091600
208 Ga0105240_10017665
209 Ga0111539_10006080
210 Ga0111539_10025629
211 Ga0111539_10041304
212 Ga0111539_10126121
213 Ga0114129_10108189
214 Ga0114129_10332203
215 Ga0105243_10000187
216 Ga0105243_10036041
217 Ga0105242_10000008
218 Ga0105248_10004972
219 Ga0157370_10015986
220 Ga0157374_10007248
221 Ga0157378_10002134
222 Ga0157378_10072281
223 Ga0163162_10002738
224 Ga0163162_10002798
225 Ga0163163_10004532
226 Ga0163163_10107759
227 Ga0157380_10009094
228 Ga0213876_10007754
229 Ga0207684_10000415
230 Ga0207684_10070627
231 Ga0207707_10000007
232 Ga0207707_10013931
233 Ga0207695_10019843
234 Ga0207660_10003984
235 Ga0207657_10028305
236 Ga0207657_10134743
237 Ga0207652_10001408
238 Ga0207652_10020995
239 Ga0207646_10000106
240 Ga0207681_10005342
241 Ga0207650_10001986
242 Ga0207650_10029632
243 Ga0207644_10004746
244 Ga0207686_10000023
245 Ga0207709_10000062
246 Ga0207709_10011605
247 Ga0207691_10060268
248 Ga0207711_10131035
249 Ga0207668_10013825
250 Ga0207677_10043952
251 Ga0207677_10047706
252 Ga0207703_10043192
253 Ga0207708_10012955
254 Ga0207708_10027689
255 Ga0207676_10002290
256 Ga0207676_10083379
257 Ga0207674_10002475
258 Ga0207674_10009433
259 Ga0209974_10000163
260 Ga0207428_10012956
261 Ga0207428_10065547
262 Ga0268265_10026365
263 Ga0268264_10112706
264 Ga0268264_10131275
265 Ga0316576_10005160
266 Ga0373954_0000357
267 Ga0316574_0001607
268 Ga0373935_0005857
269 Ga0373927_0002857
270 Ga0373947_0011971
271 Ga0373937_0000605
272 Ga0373925_0000641
273 Ga0436365_1020102
274 Ga0436365_1074430
275 Ga0436361_0351327
276 Ga0466957_0061698
277 Ga0495587_0097096
278 Ga0495621_0022859
279 Ga0496111_0107623
280 Ga0496112_0097947
281 Ga0501034_0018725
282 Ga0501039_0002507
283 Ga0501040_0010578
284 Ga0501047_0072622
285 Ga0501070_0093820
286 Ga0501070_0103155
287 Ga0501071_0000476
288 Ga0501073_0001733
289 Ga0501075_0018055
290 Ga0501081_0002173
291 Ga0501083_0000105
292 Ga0501035_0130619
293 Ga0501044_0009196
294 nmdc:mga09592_27709_c1
295 nmdc:mga0qj67_7008_c1
296 nmdc:mga06r32_98724_c1
297 nmdc:mga08y16_10343_c1
298 nmdc:mga08y16_17870_c1
299 nmdc:mga08y16_183838_c1
300 Ga0501084_0001717
301 Ga0501082_0001282
302 Ga0501082_0003846
303 2866552711
304 2996341413

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00920

ILVD_EDD

Dehydratase family

66

581

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8epz-assembly1.cif.gz_B crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn 0.9731 8 572
8epz-assembly1.cif.gz_B crystal structure of fe-s cluster-dependent dehydratase from paralcaligenes ureilyticus in complex with mn 0.9664 8 572
5j83-assembly1.cif.gz_A crystal structure of l-arabinonate dehydratase in apo-form 0.9634 8 568
5oyn-assembly1.cif.gz_D crystal structure of d-xylonate dehydratase in holo-form 0.953 3 561
7m3k-assembly1.cif.gz_A crystal structure of galactonate dehydratase from brucella melitensis biovar abortus 2308 0.9471 7 561
ID Description Score Start End Superfamily
af_Q2FWK7_1_375_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9366 8 375 3.40.50.360
af_I1M137_1_420_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9352 5 374 3.40.50.1820
af_Q2FWK7_1_375_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9172 8 375 3.40.50.360
af_Q58672_371_522_3.50.30.80 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;IlvD/EDD C-terminal domain-like 0.8729 376 530 3.50.30.80
af_Q58672_371_522_3.50.30.80 Alpha Beta;3-Layer(bba) Sandwich;Glucose Oxidase; domain 1;IlvD/EDD C-terminal domain-like 0.8676 376 530 3.50.30.80
ID Description Score Start End GO Terms
AF-T0ZT25-F1-model_v4 Dihydroxy-acid and 6-phosphogluconate dehydratase (EC 4.-.-.-) 0.9948 219 372 GO:0016836
GO:0046872
GO:0051536
AF-A0A354FS84-F1-model_v4 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.9879 2 354 GO:0004160
GO:0019752
GO:0046872
GO:0051536
AF-A0A2V9WTS7-F1-model_v4 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.9878 1 363 GO:0004160
GO:0019752
GO:0046872
GO:0051536
AF-A0A2D8QHC1-F1-model_v4 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.9873 1 372 GO:0004160
GO:0019752
GO:0046872
GO:0051536
AF-A0A537A0H5-F1-model_v4 Dihydroxy-acid dehydratase (EC 4.2.1.9) 0.987 100 573 GO:0004160
GO:0019752
GO:0046872
GO:0051536

Map