F213512

General Info

Members Datasets Scaffolds Average Seq Length
152 107 304 333

Family's Representative Sequence

Representative Sequence 3300005347|Ga0070668_100016577|Ga0070668_1000165772
Length 403
Sequence MRCRNGVCCPGRQSTALSWTVAAVRPQRASCVRFRSGGAQCDLMPALPIRSPRRGRRHGRPTLPWIPDVDRTTAIVDCAVYRDGVRQPGTPTWQEALDDVRRQGTGFLWIGLHGPTERQLSALAEAFDLHPLAVEDAVNAHQRPKLDRYDESLFVVVKTVHYNSEGESTTTEVVETGEVMVFVGKDFVITVRHGEHGDLRGMRKKLEADAEQLALGPSVVLHAVLDRVVDDYLAVTAALQSDIDEIESSVFDGVLLQTETNRIYLLKREVLALKRAVAPLAAPLQMLSGRPMRFVNDDVREYFRDVDDHLIHVTDQVVEFDGLLTTLVSANLAQVSVRQNEDMRKIAAWVAIVSVPTMVAGIEGMNFDHMPEQSWTFSYPLVALLTIGVCVALYRSFKRNGWL

Samples

Sample ID Description Type Environment
1 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
8 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
23 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
33 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
38 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
39 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
40 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
41 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
42 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
47 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
48 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
51 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
52 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
53 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
54 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
55 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
56 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
57 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
58 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
59 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
60 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
61 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
62 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
63 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
75 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
76 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
77 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
78 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
79 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
80 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
83 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
86 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
87 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
88 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
89 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
94 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
95 2643221641 Nocardioides sp. Root122 Isolate Unclassified
96 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
97 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
98 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
99 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
100 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
101 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
102 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
103 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
104 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
105 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
106 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
107 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.45
Metatranscriptomes 0
Isolates 8.55

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.97
Nodule 0
Rhizoplane 2.63
Rhizosphere 84.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070668_100016577 3300005347 Bacteria 5508
2 JGI24735J21928_10013771 3300002067 Bacteria 2536
3 JGI25407J50210_10004957 3300003373 Bacteria 3252
4 JGI25407J50210_10008796 3300003373 Bacteria 2549
5 Ga0070668_100274222 3300005347 Bacteria 1407
6 Ga0070671_100043473 3300005355 Bacteria 3733
7 Ga0070667_100001058 3300005367 Bacteria 25154
8 Ga0070713_100010433 3300005436 Bacteria 6710
9 Ga0070672_100171026 3300005543 Bacteria 1807
10 Ga0070686_100043449 3300005544 Bacteria 2820
11 Ga0070665_100005185 3300005548 Bacteria 13483
12 Ga0068860_100000067 3300005843 Bacteria 180176
13 Ga0081455_10007286 3300005937 Bacteria 11674
14 Ga0081455_10022365 3300005937 Bacteria 5910
15 Ga0081455_10026814 3300005937 Bacteria 5291
16 Ga0081538_10000018 3300005981 Bacteria 143542
17 Ga0081538_10000770 3300005981 Bacteria 35031
18 Ga0081538_10003427 3300005981 Bacteria 14997
19 Ga0081538_10004335 3300005981 Bacteria 13104
20 Ga0081538_10006688 3300005981 Bacteria 10100
21 Ga0081538_10006784 3300005981 Bacteria 10006
22 Ga0081538_10034992 3300005981 Bacteria 3309
23 Ga0081538_10053167 3300005981 Bacteria 2410
24 Ga0081538_10100181 3300005981 Bacteria 1462
25 Ga0081540_1047866 3300005983 Bacteria 2146
26 Ga0081539_10039057 3300005985 Bacteria 2806
27 Ga0070717_10003901 3300006028 Bacteria 10727
28 Ga0075367_10035385 3300006178 Bacteria 2890
29 Ga0075428_100001540 3300006844 Bacteria 24687
30 Ga0075428_100122707 3300006844 Bacteria 2828
31 Ga0075428_100176404 3300006844 Bacteria 2314
32 Ga0075428_100327572 3300006844 Bacteria 1645
33 Ga0075430_100000734 3300006846 Bacteria 25115
34 Ga0075430_100004297 3300006846 Bacteria 12027
35 Ga0075430_100309935 3300006846 Bacteria 1305
36 Ga0075431_100001048 3300006847 Bacteria 24677
37 Ga0075431_100116987 3300006847 Bacteria 2751
38 Ga0075431_100245230 3300006847 Bacteria 1821
39 Ga0075429_100000366 3300006880 Bacteria 33350
40 Ga0075429_100017552 3300006880 Bacteria 6189
41 Ga0075429_100193752 3300006880 Bacteria 1780
42 Ga0114129_10000969 3300009147 Bacteria 37546
43 Ga0114129_10003185 3300009147 Bacteria 23009
44 Ga0105243_10038601 3300009148 Bacteria 3719
45 Ga0105243_10092937 3300009148 Bacteria 2488
46 Ga0105248_10237448 3300009177 Bacteria 2052
47 Ga0105246_10073566 3300011119 Bacteria 2413
48 Ga0157378_10193765 3300013297 Bacteria 1919
49 Ga0157380_10018461 3300014326 Bacteria 5178
50 Ga0157379_10052903 3300014968 Bacteria 3627
51 Ga0213876_10007583 3300021384 Bacteria 5891
52 Ga0207700_10037246 3300025928 Bacteria 3521
53 Ga0207668_10020767 3300025972 Bacteria 4180
54 Ga0207683_10114547 3300026121 Bacteria 2416
55 Ga0207428_10127522 3300027907 Bacteria 1948
56 Ga0268266_10005003 3300028379 Bacteria 12519
57 Ga0268264_10000114 3300028381 Bacteria 203211
58 Ga0307515_10071527 3300028794 Bacteria 4699
59 Ga0307513_10020394 3300031456 Bacteria 7864
60 Ga0307408_100128378 3300031548 Bacteria 1975
61 Ga0307405_10070806 3300031731 Bacteria 2241
62 Ga0307410_10165849 3300031852 Bacteria 1660
63 Ga0307406_10033032 3300031901 Bacteria 3164
64 Ga0307412_10256815 3300031911 Bacteria 1360
65 Ga0307409_100042440 3300031995 Bacteria 3407
66 Ga0307409_100065662 3300031995 Bacteria 2857
67 Ga0307409_100070266 3300031995 Bacteria 2779
68 Ga0307409_100443078 3300031995 Bacteria 1252
69 Ga0307416_100161126 3300032002 Bacteria 2074
70 Ga0307415_100062417 3300032126 Bacteria 2584
71 Ga0395900_0196749 3300037418 Bacteria 2042
72 Ga0395905_0276077 3300037471 Bacteria 1566
73 Ga0395901_0160344 3300038443 Bacteria 2362
74 Ga0400483_238571 3300039062 Bacteria 39082
75 Ga0436365_1544123 3300039437 Bacteria 29426
76 Ga0451791_1321321 3300041451 Bacteria 1879
77 Ga0451837_0188757 3300041494 Bacteria 3134
78 Ga0451843_1013896 3300041509 Bacteria 1387
79 Ga0439464_0020874 3300042439 Bacteria 1796
80 Ga0495605_0037075 3300046474 Bacteria 2455
81 Ga0495596_0027695 3300046500 Bacteria 2277
82 Ga0495663_0047069 3300046525 Bacteria 1327
83 Ga0495669_0079022 3300046684 Bacteria 1508
84 Ga0496102_0095773 3300048905 Bacteria 2752
85 Ga0496103_0054388 3300048906 Bacteria 2481
86 Ga0496110_0053485 3300048913 Bacteria 3550
87 Ga0496117_0053346 3300048920 Bacteria 2842
88 Ga0496118_0002264 3300048921 Bacteria 26318
89 Ga0496126_0039487 3300048929 Bacteria 4379
90 Ga0501031_0035408 3300049568 Bacteria 3256
91 Ga0501031_0203542 3300049568 Bacteria 1291
92 Ga0501032_0257099 3300049569 Bacteria 1133
93 Ga0501033_0040496 3300049570 Bacteria 3478
94 Ga0501036_0060584 3300049572 Bacteria 3206
95 Ga0501039_0024755 3300049575 Bacteria 4611
96 Ga0501039_0114636 3300049575 Bacteria 2109
97 Ga0501040_0011887 3300049576 Bacteria 5695
98 Ga0501040_0078267 3300049576 Bacteria 2288
99 Ga0501041_0007335 3300049577 Bacteria 6469
100 Ga0501042_0009270 3300049578 Bacteria 6551
101 Ga0501042_0137941 3300049578 Bacteria 1758
102 Ga0501046_0201046 3300049580 Bacteria 1483
103 Ga0501048_0030594 3300049582 Bacteria 3895
104 Ga0501069_0148641 3300049585 Bacteria 1346
105 Ga0501071_0057864 3300049587 Bacteria 2802
106 Ga0501071_0130487 3300049587 Bacteria 1866
107 Ga0501072_0004835 3300049588 Bacteria 10259
108 Ga0501072_0014296 3300049588 Bacteria 6083
109 Ga0501072_0186000 3300049588 Bacteria 1657
110 Ga0501075_0079800 3300049591 Bacteria 2476
111 Ga0501075_0340933 3300049591 Bacteria 1142
112 Ga0501076_0005465 3300049592 Bacteria 9147
113 Ga0501076_0136313 3300049592 Bacteria 1993
114 Ga0501077_0009293 3300049593 Bacteria 6103
115 Ga0501077_0026971 3300049593 Bacteria 3648
116 Ga0501079_0272832 3300049741 Bacteria 1322
117 Ga0501080_0082048 3300049742 Bacteria 2995
118 Ga0501081_0002790 3300049743 Bacteria 11082
119 Ga0501081_0076463 3300049743 Bacteria 2338
120 Ga0501081_0369884 3300049743 Bacteria 1058
121 Ga0501035_0184771 3300049822 Bacteria 1795
122 Ga0501044_0306579 3300049823 Bacteria 1515
123 Ga0501045_0017079 3300049824 Bacteria 5153
124 Ga0501045_0049318 3300049824 Bacteria 3070
125 nmdc:mga06z11_81007_c1 3300050494 Bacteria 1742
126 nmdc:mga05p37_379692_c1 3300050507 Bacteria 1656
127 nmdc:mga05p37_601_c1 3300050507 Bacteria 39708
128 nmdc:mga05p37_6774_c1 3300050507 Bacteria 13505
129 nmdc:mga09592_255354_c1 3300050508 Bacteria 1519
130 nmdc:mga0qj67_20618_c1 3300050509 Bacteria 5050
131 nmdc:mga0qj67_37398_c1 3300050509 Bacteria 3802
132 nmdc:mga06r32_236867_c1 3300050510 Bacteria 1813
133 nmdc:mga06r32_38235_c1 3300050510 Bacteria 4544
134 nmdc:mga06r32_72292_c1 3300050510 Bacteria 3339
135 nmdc:mga06r32_7761_c1 3300050510 Bacteria 9647
136 nmdc:mga08y16_170901_c1 3300050511 Bacteria 2258
137 nmdc:mga0a205_104148_c1 3300050515 Bacteria 2736
138 Ga0500568_0001871 3300053139 Bacteria 12963
139 Ga0501084_0014131 3300054114 Bacteria 6611
140 2644230370 2643221641 Bacteria 4490190
141 2676493438 2675903060 Bacteria 10051191
142 2816511527 2816332139 Bacteria 9138787
143 2873315089 2873314349 Bacteria 8512634
144 2884694137 2884693830 Bacteria 11273186
145 2895444595 2895442618 Bacteria 11027144
146 2904767279 2904765812 Bacteria 5369154
147 2904775837 2904770941 Bacteria 5580202
148 2908812659 2908811453 Bacteria 5478616
149 2919424856 2919420072 Bacteria 5390363
150 2919437422 2919432681 Bacteria 5390474
151 8055071953 8055066027 Bacteria 9479577
152 8055176351 8055172936 Bacteria 9305943
153 Ga0070668_100016577
154 JGI24735J21928_10013771
155 JGI25407J50210_10004957
156 JGI25407J50210_10008796
157 Ga0070668_100274222
158 Ga0070671_100043473
159 Ga0070667_100001058
160 Ga0070713_100010433
161 Ga0070672_100171026
162 Ga0070686_100043449
163 Ga0070665_100005185
164 Ga0068860_100000067
165 Ga0081455_10007286
166 Ga0081455_10022365
167 Ga0081455_10026814
168 Ga0081538_10000018
169 Ga0081538_10000770
170 Ga0081538_10003427
171 Ga0081538_10004335
172 Ga0081538_10006688
173 Ga0081538_10006784
174 Ga0081538_10034992
175 Ga0081538_10053167
176 Ga0081538_10100181
177 Ga0081540_1047866
178 Ga0081539_10039057
179 Ga0070717_10003901
180 Ga0075367_10035385
181 Ga0075428_100001540
182 Ga0075428_100122707
183 Ga0075428_100176404
184 Ga0075428_100327572
185 Ga0075430_100000734
186 Ga0075430_100004297
187 Ga0075430_100309935
188 Ga0075431_100001048
189 Ga0075431_100116987
190 Ga0075431_100245230
191 Ga0075429_100000366
192 Ga0075429_100017552
193 Ga0075429_100193752
194 Ga0114129_10000969
195 Ga0114129_10003185
196 Ga0105243_10038601
197 Ga0105243_10092937
198 Ga0105248_10237448
199 Ga0105246_10073566
200 Ga0157378_10193765
201 Ga0157380_10018461
202 Ga0157379_10052903
203 Ga0213876_10007583
204 Ga0207700_10037246
205 Ga0207668_10020767
206 Ga0207683_10114547
207 Ga0207428_10127522
208 Ga0268266_10005003
209 Ga0268264_10000114
210 Ga0307515_10071527
211 Ga0307513_10020394
212 Ga0307408_100128378
213 Ga0307405_10070806
214 Ga0307410_10165849
215 Ga0307406_10033032
216 Ga0307412_10256815
217 Ga0307409_100042440
218 Ga0307409_100065662
219 Ga0307409_100070266
220 Ga0307409_100443078
221 Ga0307416_100161126
222 Ga0307415_100062417
223 Ga0395900_0196749
224 Ga0395905_0276077
225 Ga0395901_0160344
226 Ga0400483_238571
227 Ga0436365_1544123
228 Ga0451791_1321321
229 Ga0451837_0188757
230 Ga0451843_1013896
231 Ga0439464_0020874
232 Ga0495605_0037075
233 Ga0495596_0027695
234 Ga0495663_0047069
235 Ga0495669_0079022
236 Ga0496102_0095773
237 Ga0496103_0054388
238 Ga0496110_0053485
239 Ga0496117_0053346
240 Ga0496118_0002264
241 Ga0496126_0039487
242 Ga0501031_0035408
243 Ga0501031_0203542
244 Ga0501032_0257099
245 Ga0501033_0040496
246 Ga0501036_0060584
247 Ga0501039_0024755
248 Ga0501039_0114636
249 Ga0501040_0011887
250 Ga0501040_0078267
251 Ga0501041_0007335
252 Ga0501042_0009270
253 Ga0501042_0137941
254 Ga0501046_0201046
255 Ga0501048_0030594
256 Ga0501069_0148641
257 Ga0501071_0057864
258 Ga0501071_0130487
259 Ga0501072_0004835
260 Ga0501072_0014296
261 Ga0501072_0186000
262 Ga0501075_0079800
263 Ga0501075_0340933
264 Ga0501076_0005465
265 Ga0501076_0136313
266 Ga0501077_0009293
267 Ga0501077_0026971
268 Ga0501079_0272832
269 Ga0501080_0082048
270 Ga0501081_0002790
271 Ga0501081_0076463
272 Ga0501081_0369884
273 Ga0501035_0184771
274 Ga0501044_0306579
275 Ga0501045_0017079
276 Ga0501045_0049318
277 nmdc:mga06z11_81007_c1
278 nmdc:mga05p37_379692_c1
279 nmdc:mga05p37_601_c1
280 nmdc:mga05p37_6774_c1
281 nmdc:mga09592_255354_c1
282 nmdc:mga0qj67_20618_c1
283 nmdc:mga0qj67_37398_c1
284 nmdc:mga06r32_236867_c1
285 nmdc:mga06r32_38235_c1
286 nmdc:mga06r32_72292_c1
287 nmdc:mga06r32_7761_c1
288 nmdc:mga08y16_170901_c1
289 nmdc:mga0a205_104148_c1
290 Ga0500568_0001871
291 Ga0501084_0014131
292 2644230370
293 2676493438
294 2816511527
295 2873315089
296 2884694137
297 2895444595
298 2904767279
299 2904775837
300 2908812659
301 2919424856
302 2919437422
303 8055071953
304 8055176351

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01544

CorA

CorA-like Mg2+ transporter protein

104

399

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8fih-assembly1.cif.gz_C multi-state design of two-state switchable hinge proteins 0.8365 178 287
4egw-assembly1.cif.gz_B the structure of the soluble domain of cora from methanocaldococcus jannaschii 0.8278 32 290
8slb-assembly1.cif.gz_A x-ray structure of cora n-terminal domain in complex with conformation-specific synthetic antibody c12 0.8163 32 268
4egw-assembly1.cif.gz_B the structure of the soluble domain of cora from methanocaldococcus jannaschii 0.8128 32 290
8fih-assembly1.cif.gz_C multi-state design of two-state switchable hinge proteins 0.8013 178 287
ID Description Score Start End Superfamily
af_O50455_180_293_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.9513 172 285 1.20.58.340
af_O50455_48_179_3.30.460.20 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;CorA soluble domain-like 0.9455 47 171 3.30.460.20
af_O50455_180_293_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.9352 172 285 1.20.58.340
af_Q58439_132_258_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.9184 174 299 1.20.58.340
5jtgA02 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.9137 176 280 1.20.58.340
ID Description Score Start End GO Terms
AF-A0A529L5Y1-F1-model_v4 Magnesium transporter 0.9465 65 280 GO:0000287
GO:0005886
GO:0015087
GO:0015095
GO:0050897
AF-A0A498ERL3-F1-model_v4 deleted 0.9355 100 285
AF-A0A3C2BVY7-F1-model_v4 Transporter 0.9345 32 249 GO:0000287
GO:0005886
GO:0015087
GO:0015095
GO:0050897
AF-B5H8N2-F1-model_v4 Ion transporter 0.9317 32 309 GO:0000287
GO:0005886
GO:0015087
GO:0015095
GO:0050897
AF-A0A529L5Y1-F1-model_v4 Magnesium transporter 0.9296 65 280 GO:0000287
GO:0005886
GO:0015087
GO:0015095
GO:0050897

Map