F212751

General Info

Members Datasets Scaffolds Average Seq Length
151 129 136 311

Family's Representative Sequence

Representative Sequence 3300049582|Ga0501048_0053538|Ga0501048_0053538_242_1300
Length 337
Sequence MHYLKQTLHLYSENCKMSDKKNAWFLFIMGQPGKSTTPRIRLWRLLKGLGAAVLRDGVYLMPQREALRQALEEQVQMVQRSGGAASLLAVEPVTDTDAQFRALFDRREDYATLLAAIAQWRPGISEGTETQARRQLQQWRREHEAIVAIDYFPGAITRHFSPDEPQPLPTGIRRLEQTAYRGKCWATRQRVWVDRVASAWLIRRFIDPEARFVWLRAPQDCPADAIGFDFDGAMFTHTENRVTFEVLLASFDLDIDPALTRLGILVHALDVGGVPVPEAAGFEAILTGARASYADDDQILAAMTPVLDALYIAFGQEVLDERPAGARNRRRTPIQRS

Samples

Sample ID Description Type Environment
1 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
2 2643221639 Pelomonas sp. Root1217 Isolate Unclassified
3 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
4 2775507074 Klebsiella sp. D5A Isolate Unclassified
5 2842918807 Luteibacter sp. R-73110 Isolate Unclassified
6 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
7 2912963787 Pseudomonas sp. R32 Isolate Rhizosphere
8 2928515477 Acinetobacter bereziniae 1375 Isolate Rhizosphere
9 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
10 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
13 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
38 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
81 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
82 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
83 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
86 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
87 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
97 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
98 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
106 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
111 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
115 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
116 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
124 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
125 639633007 Azoarcus olearius BH72 Isolate Unclassified
126 651053060 Stutzerimonas stutzeri CMT.A.9 Isolate Rhizosphere
127 8011350971 Pseudomonas sp. 30_B Isolate Rhizosphere
128 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
129 8055878733 Pseudomonas palmensis BBB001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.07
Metatranscriptomes 0
Isolates 9.93

Biome Distribution

Category Percentage (%)
Aerial Root 1.32
Bulb 0
Endosphere 1.99
Nodule 0
Rhizoplane 0.66
Rhizosphere 88.08
Stem 0
Stem Tuber 0
Unclassified 7.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10009383 3300003323 Bacteria 56414
2 Ga0058692_1015049 3300003856 Bacteria 1754
3 JGI25405J52794_10001658 3300003911 Bacteria 3698
4 Ga0070676_10078085 3300005328 Bacteria 2002
5 Ga0070692_10147654 3300005345 Unclassified 1336
6 Ga0070668_100033475 3300005347 Bacteria 3914
7 Ga0070669_100118806 3300005353 Bacteria 2014
8 Ga0070675_100062451 3300005354 Bacteria 3078
9 Ga0070674_100091180 3300005356 Bacteria 2200
10 Ga0070708_100049224 3300005445 Bacteria 3728
11 Ga0068867_100000684 3300005459 Bacteria 22475
12 Ga0070706_100161067 3300005467 Bacteria 2095
13 Ga0070698_100390956 3300005471 Bacteria 1324
14 Ga0068861_100002815 3300005719 Bacteria 11433
15 Ga0068858_100135501 3300005842 Unclassified 2311
16 Ga0068860_100009857 3300005843 Bacteria 9476
17 Ga0081455_10002898 3300005937 Bacteria 20145
18 Ga0081538_10017182 3300005981 Bacteria 5503
19 Ga0081539_10009663 3300005985 Bacteria 7994
20 Ga0081539_10016408 3300005985 Bacteria 5292
21 Ga0075364_10006419 3300006051 Bacteria 6904
22 Ga0068871_100043250 3300006358 Unclassified 3618
23 Ga0075428_100013106 3300006844 Bacteria 9220
24 Ga0075430_100067409 3300006846 Bacteria 3004
25 Ga0075431_100031679 3300006847 Bacteria 5446
26 Ga0075431_100370008 3300006847 Bacteria 1438
27 Ga0075433_10182968 3300006852 Bacteria 1865
28 Ga0068865_100018587 3300006881 Bacteria 4488
29 Ga0105251_10016603 3300009011 Bacteria 3970
30 Ga0105244_10002375 3300009036 Bacteria 14272
31 Ga0105244_10034183 3300009036 Bacteria 2679
32 Ga0111539_10128536 3300009094 Bacteria 2968
33 Ga0111539_10273927 3300009094 Bacteria 1964
34 Ga0114129_10101006 3300009147 Bacteria 3991
35 Ga0114129_10174810 3300009147 Bacteria 2925
36 Ga0114129_10201743 3300009147 Bacteria 2693
37 Ga0105243_10400942 3300009148 Bacteria 1274
38 Ga0105243_10403386 3300009148 Unclassified 1271
39 Ga0105248_10046972 3300009177 Unclassified 4841
40 Ga0105249_10017570 3300009553 Bacteria 6350
41 Ga0105249_10182595 3300009553 Bacteria 2042
42 Ga0105249_10270123 3300009553 Bacteria 1694
43 Ga0157370_10040436 3300013104 Bacteria 4502
44 Ga0157378_10002071 3300013297 Bacteria 17952
45 Ga0157378_10402181 3300013297 Bacteria 1349
46 Ga0163162_10001810 3300013306 Bacteria 20078
47 Ga0163162_10452014 3300013306 Bacteria 1417
48 Ga0157375_10393581 3300013308 Bacteria 1552
49 Ga0163163_10222618 3300014325 Bacteria 1936
50 Ga0157379_10089446 3300014968 Bacteria 2762
51 Ga0157376_10386831 3300014969 Unclassified 1349
52 Ga0163161_10129609 3300017792 Bacteria 1902
53 Ga0213872_10001966 3300021361 Bacteria 12537
54 Ga0209672_103474 3300025228 Bacteria 3242
55 Ga0209676_1001054 3300025292 Bacteria 31612
56 Ga0207655_1000006 3300025728 Bacteria 861092
57 Ga0207681_10035238 3300025923 Bacteria 3296
58 Ga0207681_10353828 3300025923 Bacteria 1176
59 Ga0207659_10071476 3300025926 Bacteria 2534
60 Ga0207709_10285970 3300025935 Bacteria 1220
61 Ga0207669_10055470 3300025937 Bacteria 2400
62 Ga0207704_10010627 3300025938 Bacteria 4498
63 Ga0207689_10053812 3300025942 Bacteria 3316
64 Ga0207712_10026422 3300025961 Bacteria 3868
65 Ga0207708_10022346 3300026075 Bacteria 4777
66 Ga0207641_10231151 3300026088 Bacteria 1719
67 Ga0207648_10000432 3300026089 Bacteria 46265
68 Ga0207675_100000560 3300026118 Bacteria 36359
69 Ga0209371_1000206 3300027312 Bacteria 84144
70 Ga0207428_10013442 3300027907 Bacteria 7150
71 Ga0268265_10022892 3300028380 Bacteria 4398
72 Ga0268264_10007674 3300028381 Bacteria 8991
73 Ga0268264_10262883 3300028381 Bacteria 1608
74 Ga0307515_10096352 3300028794 Bacteria 3630
75 Ga0268256_1000241 3300030500 Bacteria 57706
76 Ga0268256_1005590 3300030500 Bacteria 4896
77 Ga0265327_10091803 3300031251 Bacteria 1479
78 Ga0307408_100000127 3300031548 Bacteria 84326
79 Ga0307408_100001956 3300031548 Bacteria 14901
80 Ga0307516_10005198 3300031730 Bacteria 15667
81 Ga0307406_10012327 3300031901 Bacteria 4875
82 Ga0307412_10000366 3300031911 Bacteria 28099
83 Ga0307414_10135345 3300032004 Bacteria 1920
84 Ga0307411_10000595 3300032005 Bacteria 12974
85 Ga0373940_0033415 3300035088 Unclassified 1383
86 Ga0373939_0000006 3300035114 Bacteria 78721
87 Ga0373962_0014393 3300035242 Bacteria 2016
88 Ga0373931_0012800 3300035691 Bacteria 4072
89 Ga0436361_0303823 3300039447 Bacteria 10850
90 Ga0451793_1275551 3300041452 Bacteria 3233
91 Ga0439446_0000087 3300042156 Bacteria 15432
92 Ga0439459_0000403 3300042438 Bacteria 5448
93 Ga0451577_0006440 3300042876 Bacteria 11712
94 Ga0453683_0097121 3300044673 Bacteria 1849
95 Ga0453684_0135562 3300044712 Bacteria 2948
96 Ga0453684_0269935 3300044712 Bacteria 1944
97 Ga0451576_0002038 3300045051 Bacteria 31878
98 Ga0466967_0163246 3300045976 Bacteria 2092
99 Ga0495638_0000069 3300046460 Bacteria 167503
100 Ga0495651_0007282 3300046462 Bacteria 8457
101 Ga0495610_0004390 3300046512 Bacteria 10436
102 Ga0495628_0000365 3300046516 Bacteria 41378
103 Ga0495643_0000157 3300046522 Bacteria 110922
104 Ga0495648_0086457 3300046524 Bacteria 1768
105 Ga0495652_0260507 3300046529 Bacteria 1280
106 Ga0495645_0039498 3300046543 Bacteria 3442
107 Ga0495625_0022755 3300046660 Bacteria 4798
108 Ga0495623_0018734 3300046679 Bacteria 4470
109 Ga0495646_0014182 3300046680 Bacteria 5066
110 Ga0495649_0031528 3300046694 Bacteria 2922
111 Ga0495672_0000495 3300047320 Bacteria 45559
112 Ga0495683_0011099 3300047323 Bacteria 4748
113 Ga0496117_0014217 3300048920 Bacteria 6875
114 Ga0496118_0051666 3300048921 Bacteria 3142
115 Ga0496125_0086512 3300048928 Bacteria 2370
116 Ga0495678_000320 3300049459 Bacteria 51263
117 Ga0495682_0000326 3300049460 Bacteria 35389
118 Ga0495682_0000734 3300049460 Bacteria 21242
119 Ga0501036_0307599 3300049572 Bacteria 1325
120 Ga0501036_0525720 3300049572 Bacteria 984
121 Ga0501048_0053538 3300049582 Bacteria 2870
122 Ga0501209_000006 3300049656 Bacteria 32745
123 Ga0501079_0271455 3300049741 Bacteria 1326
124 Ga0501083_0023987 3300049744 Bacteria 4229
125 Ga0501045_0070154 3300049824 Bacteria 2578
126 nmdc:mga05p37_25849_c1 3300050507 Bacteria 7138
127 nmdc:mga05p37_34931_c1 3300050507 Bacteria 6162
128 nmdc:mga05p37_518700_c1 3300050507 Bacteria 1364
129 nmdc:mga09592_234833_c1 3300050508 Bacteria 1589
130 nmdc:mga09592_25599_c1 3300050508 Bacteria 4885
131 nmdc:mga0qj67_47073_c1 3300050509 Bacteria 3406
132 nmdc:mga08y16_152222_c1 3300050511 Bacteria 2404
133 nmdc:mga08y16_188506_c1 3300050511 Bacteria 2140
134 nmdc:mga0n895_187641_c1 3300050512 Bacteria 2098
135 nmdc:mga08x19_27955_c1 3300050514 Bacteria 3530
136 Ga0530510_0213621 3300061734 Bacteria 1433

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049572 Ga0501036_0525720 Ga0501036_0525720_18_878 251
2 3300049741 Ga0501079_0271455 Ga0501079_0271455_75_953 257
3 3300050511 nmdc:mga08y16_188506_c1 nmdc:mga08y16_188506_c1_1290_2114 271
4 iso_pu_bacteria 2912963787 2912966722 274
5 3300032004 Ga0307414_10135345 Ga0307414_101353452 278
6 3300032005 Ga0307411_10000595 Ga0307411_1000059511 278
7 3300009147 Ga0114129_10201743 Ga0114129_102017431 283
8 3300050507 nmdc:mga05p37_25849_c1 nmdc:mga05p37_25849_c1_4784_5644 283
9 iso_pu_bacteria 651053060 651177915 288
10 3300005445 Ga0070708_100049224 Ga0070708_1000492245 291
11 3300035088 Ga0373940_0033415 Ga0373940_0033415_254_1204 291
12 3300005842 Ga0068858_100135501 Ga0068858_1001355013 292
13 3300006358 Ga0068871_100043250 Ga0068871_1000432502 292
14 3300009148 Ga0105243_10403386 Ga0105243_104033862 292
15 3300009177 Ga0105248_10046972 Ga0105248_100469724 292
16 3300013297 Ga0157378_10402181 Ga0157378_104021811 292
17 3300014325 Ga0163163_10222618 Ga0163163_102226181 292
18 3300014969 Ga0157376_10386831 Ga0157376_103868311 292
19 3300025935 Ga0207709_10285970 Ga0207709_102859702 292
20 3300013104 Ga0157370_10040436 Ga0157370_100404365 293
21 3300039447 Ga0436361_0303823 Ga0436361_0303823_5210_6109 293
22 3300046462 Ga0495651_0007282 Ga0495651_0007282_596_1489 293
23 3300046516 Ga0495628_0000365 Ga0495628_0000365_15944_16837 293
24 3300046529 Ga0495652_0260507 Ga0495652_0260507_82_975 293
25 3300046679 Ga0495623_0018734 Ga0495623_0018734_2039_2932 293
26 3300005467 Ga0070706_100161067 Ga0070706_1001610672 295
27 3300049582 Ga0501048_0053538 Ga0501048_0053538_242_1300 296
28 3300061734 Ga0530510_0213621 Ga0530510_0213621_207_1217 296
29 3300009553 Ga0105249_10182595 Ga0105249_101825952 297
30 3300031911 Ga0307412_10000366 Ga0307412_1000036625 301
31 3300042876 Ga0451577_0006440 Ga0451577_0006440_4366_5358 302
32 3300045051 Ga0451576_0002038 Ga0451576_0002038_1741_2733 302
33 3300048928 Ga0496125_0086512 Ga0496125_0086512_1188_2129 302
34 iso_pu_bacteria 2928515477 2928515992 302
35 iso_pu_bacteria 639633007 639788120 302
36 3300006846 Ga0075430_100067409 Ga0075430_1000674091 303
37 3300003911 JGI25405J52794_10001658 JGI25405J52794_100016582 304
38 3300005937 Ga0081455_10002898 Ga0081455_1000289810 304
39 iso_pu_bacteria 2775507074 2777022060 305
40 iso_pu_bacteria 2984559226 2984564324 305
41 iso_pu_bacteria 2984595703 2984597056 305
42 iso_pu_bacteria 2643221639 2644220297 306
43 iso_pu_bacteria 2643221646 2644259154 306
44 iso_pu_bacteria 2844528606 2844531554 307
45 iso_pu_bacteria 8011350971 8011352058 307
46 iso_pu_bacteria 8019769354 8019772662 307
47 iso_pu_bacteria 8055878733 8055882537 307
48 3300005345 Ga0070692_10147654 Ga0070692_101476542 309
49 3300009011 Ga0105251_10016603 Ga0105251_100166033 309
50 3300031730 Ga0307516_10005198 Ga0307516_100051983 309
51 3300049744 Ga0501083_0023987 Ga0501083_0023987_2944_3912 309
52 3300005471 Ga0070698_100390956 Ga0070698_1003909562 310
53 3300005981 Ga0081538_10017182 Ga0081538_100171824 310
54 3300005985 Ga0081539_10009663 Ga0081539_100096637 310
55 3300005985 Ga0081539_10016408 Ga0081539_100164082 310
56 3300006051 Ga0075364_10006419 Ga0075364_100064192 310
57 3300006844 Ga0075428_100013106 Ga0075428_1000131064 310
58 3300006847 Ga0075431_100031679 Ga0075431_1000316794 310
59 3300006847 Ga0075431_100370008 Ga0075431_1003700081 310
60 3300006852 Ga0075433_10182968 Ga0075433_101829681 310
61 3300009036 Ga0105244_10002375 Ga0105244_100023757 310
62 3300009036 Ga0105244_10034183 Ga0105244_100341832 310
63 3300009094 Ga0111539_10128536 Ga0111539_101285362 310
64 3300009094 Ga0111539_10273927 Ga0111539_102739271 310
65 3300009147 Ga0114129_10101006 Ga0114129_101010062 310
66 3300009147 Ga0114129_10174810 Ga0114129_101748104 310
67 3300009148 Ga0105243_10400942 Ga0105243_104009422 310
68 3300009553 Ga0105249_10270123 Ga0105249_102701232 310
69 3300013306 Ga0163162_10452014 Ga0163162_104520141 310
70 3300025292 Ga0209676_1001054 Ga0209676_100105417 310
71 3300025728 Ga0207655_1000006 Ga0207655_1000006151 310
72 3300027907 Ga0207428_10013442 Ga0207428_100134425 310
73 3300028794 Ga0307515_10096352 Ga0307515_100963522 310
74 3300031548 Ga0307408_100000127 Ga0307408_10000012759 310
75 3300031548 Ga0307408_100001956 Ga0307408_10000195614 310
76 3300031901 Ga0307406_10012327 Ga0307406_100123275 310
77 3300035114 Ga0373939_0000006 Ga0373939_0000006_29965_30900 310
78 3300035242 Ga0373962_0014393 Ga0373962_0014393_403_1338 310
79 3300035691 Ga0373931_0012800 Ga0373931_0012800_2134_3069 310
80 3300044673 Ga0453683_0097121 Ga0453683_0097121_624_1580 310
81 3300044712 Ga0453684_0135562 Ga0453684_0135562_1494_2429 310
82 3300045976 Ga0466967_0163246 Ga0466967_0163246_579_1538 310
83 3300047323 Ga0495683_0011099 Ga0495683_0011099_2025_2966 310
84 3300049460 Ga0495682_0000326 Ga0495682_0000326_11741_12682 310
85 3300049460 Ga0495682_0000734 Ga0495682_0000734_4329_5270 310
86 3300049572 Ga0501036_0307599 Ga0501036_0307599_183_1139 310
87 3300049824 Ga0501045_0070154 Ga0501045_0070154_310_1266 310
88 3300050507 nmdc:mga05p37_34931_c1 nmdc:mga05p37_34931_c1_4346_5302 310
89 3300050507 nmdc:mga05p37_518700_c1 nmdc:mga05p37_518700_c1_60_1016 310
90 3300050508 nmdc:mga09592_234833_c1 nmdc:mga09592_234833_c1_188_1144 310
91 3300050508 nmdc:mga09592_25599_c1 nmdc:mga09592_25599_c1_1130_2086 310
92 3300050509 nmdc:mga0qj67_47073_c1 nmdc:mga0qj67_47073_c1_2389_3345 310
93 3300050511 nmdc:mga08y16_152222_c1 nmdc:mga08y16_152222_c1_1274_2230 310
94 3300050512 nmdc:mga0n895_187641_c1 nmdc:mga0n895_187641_c1_619_1575 310
95 3300050514 nmdc:mga08x19_27955_c1 nmdc:mga08x19_27955_c1_1741_2682 310
96 3300003323 rootH1_10009383 rootH1_1000938346 311
97 3300003856 Ga0058692_1015049 Ga0058692_10150491 311
98 3300005328 Ga0070676_10078085 Ga0070676_100780852 311
99 3300005347 Ga0070668_100033475 Ga0070668_1000334751 311
100 3300005353 Ga0070669_100118806 Ga0070669_1001188061 311
101 3300005354 Ga0070675_100062451 Ga0070675_1000624512 311
102 3300005356 Ga0070674_100091180 Ga0070674_1000911803 311
103 3300005459 Ga0068867_100000684 Ga0068867_10000068416 311
104 3300005719 Ga0068861_100002815 Ga0068861_1000028157 311
105 3300005843 Ga0068860_100009857 Ga0068860_1000098575 311
106 3300006881 Ga0068865_100018587 Ga0068865_1000185874 311
107 3300009553 Ga0105249_10017570 Ga0105249_100175703 311
108 3300013297 Ga0157378_10002071 Ga0157378_100020712 311
109 3300013306 Ga0163162_10001810 Ga0163162_1000181015 311
110 3300013308 Ga0157375_10393581 Ga0157375_103935812 311
111 3300014968 Ga0157379_10089446 Ga0157379_100894462 311
112 3300017792 Ga0163161_10129609 Ga0163161_101296092 311
113 3300021361 Ga0213872_10001966 Ga0213872_100019669 311
114 3300025228 Ga0209672_103474 Ga0209672_1034742 311
115 3300025923 Ga0207681_10035238 Ga0207681_100352383 311
116 3300025923 Ga0207681_10353828 Ga0207681_103538282 311
117 3300025926 Ga0207659_10071476 Ga0207659_100714762 311
118 3300025937 Ga0207669_10055470 Ga0207669_100554702 311
119 3300025938 Ga0207704_10010627 Ga0207704_100106274 311
120 3300025942 Ga0207689_10053812 Ga0207689_100538123 311
121 3300025961 Ga0207712_10026422 Ga0207712_100264223 311
122 3300026075 Ga0207708_10022346 Ga0207708_100223463 311
123 3300026088 Ga0207641_10231151 Ga0207641_102311512 311
124 3300026089 Ga0207648_10000432 Ga0207648_1000043217 311
125 3300026118 Ga0207675_100000560 Ga0207675_10000056027 311
126 3300027312 Ga0209371_1000206 Ga0209371_100020643 311
127 3300028380 Ga0268265_10022892 Ga0268265_100228923 311
128 3300028381 Ga0268264_10007674 Ga0268264_100076744 311
129 3300028381 Ga0268264_10262883 Ga0268264_102628833 311
130 3300030500 Ga0268256_1000241 Ga0268256_100024144 311
131 3300030500 Ga0268256_1005590 Ga0268256_10055905 311
132 3300031251 Ga0265327_10091803 Ga0265327_100918031 311
133 3300041452 Ga0451793_1275551 Ga0451793_1275551_1060_2028 311
134 3300042156 Ga0439446_0000087 Ga0439446_0000087_8597_9541 311
135 3300042438 Ga0439459_0000403 Ga0439459_0000403_3696_4664 311
136 3300044712 Ga0453684_0269935 Ga0453684_0269935_570_1511 311
137 3300046460 Ga0495638_0000069 Ga0495638_0000069_153180_154148 311
138 3300046512 Ga0495610_0004390 Ga0495610_0004390_1151_2092 311
139 3300046522 Ga0495643_0000157 Ga0495643_0000157_62434_63375 311
140 3300046524 Ga0495648_0086457 Ga0495648_0086457_643_1584 311
141 3300046543 Ga0495645_0039498 Ga0495645_0039498_2465_3415 311
142 3300046660 Ga0495625_0022755 Ga0495625_0022755_262_1203 311
143 3300046680 Ga0495646_0014182 Ga0495646_0014182_2846_3796 311
144 3300046694 Ga0495649_0031528 Ga0495649_0031528_22_963 311
145 3300047320 Ga0495672_0000495 Ga0495672_0000495_11084_12025 311
146 3300048920 Ga0496117_0014217 Ga0496117_0014217_1078_2019 311
147 3300048921 Ga0496118_0051666 Ga0496118_0051666_1041_1982 311
148 3300049459 Ga0495678_000320 Ga0495678_000320_10803_11744 311
149 3300049656 Ga0501209_000006 Ga0501209_000006_3097_4035 311
150 iso_pu_bacteria 2585427591 2585828602 311
151 iso_pu_bacteria 2842918807 2842921878 311

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09828

ChrB_C

ChrB, C-terminal domain

185

314

0.98

PF20229

ChrB_N

Protein ChrB, N-terminal

39

150

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zpw-assembly1.cif.gz_X crystal structure of a hypothetical protein tt1823 from thermus thermophilus 0.7847 2 71
3exc-assembly1.cif.gz_X-2 structure of the rna'se sso8090 from sulfolobus solfataricus 0.7843 1 70
8d3q-assembly1.cif.gz_F type i-c cas4-cas1-cas2 complex bound to a pam/nopam prespacer 0.7481 3 77
5zyf-assembly3.cif.gz_F crystal structure of streptococcus pyogenes type ii-a cas2 0.7347 1 80
1j5w-assembly1.cif.gz_B crystal structure of glycyl-trna synthetase alpha chain (tm0216) from thermotoga maritima at 1.95 a resolution 0.724 83 149
ID Description Score Start End Superfamily
3nzpA03 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.7974 87 150 1.20.58.930
3nzpB03 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.7938 87 149 1.20.58.930
1zpwX00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7847 2 71 3.30.70.240
af_P9WPJ3_23_112_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7706 2 72 3.30.70.240
af_I6WZ26_79_160_3.30.70.2650 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.7475 2 77 3.30.70.2650
ID Description Score Start End GO Terms
AF-A0A7V7WW84-F1-model_v4 Chromate resistance protein 1.001 167 306
AF-A0A142JK84-F1-model_v4 ChrB C-terminal domain-containing protein 0.9906 160 304
AF-A0A7U6M2Q7-F1-model_v4 ChrB C-terminal domain-containing protein 0.9853 187 308
AF-A0A377TWD5-F1-model_v4 Chromate resistance protein 0.9847 175 308
AF-A0A1M7RBB6-F1-model_v4 ChrB C-terminal domain-containing protein 0.9783 151 303

Feature Viewer

pLDDT pTM Quality
90.51 0.6 Medium
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Predicted Structure (AlphaFold2)

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