F212349

General Info

Members Datasets Scaffolds Average Seq Length
151 99 147 266

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0005140|Ga0466963_0005140_6462_7343
Length 293
Sequence VRRALRPRNTPVPYLRCMSVYDWAPQRRAVRPSPLFLTVVAVTALGGVLAWTEDRPGSRLGDFGVFLLVLGGWIMSVCFHEFAHAYAAYRAGDRSVEARGYLTLNPFKYTHPVLSILLPLVAIVGGGFALPGGAVYLHPHTFRSKASRSLAAAAGPLTNVVFAIVLIFVSKSHVGLGDLQQFLTGGGAHTRFWAGLAFLGLLQITAAILNFLPIPGLDGYAIIEPYLDPETVRFGEKVKPWGLLAVILALFYLNPVKNAFFDLVDAIYRAFGGTDLARAVGYAVFKFWVKQPL

Samples

Sample ID Description Type Environment
1 2643221647 Streptomyces sp. Root369 Isolate Unclassified
2 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
3 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
4 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
5 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
11 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
12 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
28 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
29 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
32 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
42 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
55 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
56 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
57 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
58 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
72 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
78 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
79 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
83 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
84 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
85 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.03
Metatranscriptomes 1.32
Isolates 2.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.28
Nodule 0
Rhizoplane 6.62
Rhizosphere 77.48
Stem 0
Stem Tuber 0
Unclassified 8.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10017695 3300003215 Bacteria 2798
2 rootH2_10081088 3300003320 Bacteria 1991
3 rootL2_10145984 3300003322 Bacteria 2588
4 Ga0006562J51391_1106264 3300003578 Bacteria 3720
5 Ga0055537_1001899 3300003773 Bacteria 7491
6 Ga0055528_1012800 3300003790 Bacteria 3231
7 Ga0065165_1004816 3300005262 Bacteria 8034
8 Ga0070658_10267498 3300005327 Bacteria 1453
9 Ga0070658_10427310 3300005327 Bacteria 1140
10 Ga0070714_100305831 3300005435 Bacteria 1483
11 Ga0070713_100611755 3300005436 Bacteria 1036
12 Ga0068856_100335953 3300005614 Bacteria 1529
13 Ga0068852_100031304 3300005616 Bacteria 4389
14 Ga0068859_100010573 3300005617 Bacteria 9293
15 Ga0081539_10001291 3300005985 Bacteria 44004
16 Ga0075365_10148351 3300006038 Bacteria 1631
17 Ga0097620_100010573 3300006931 Bacteria 9293
18 Ga0105240_10011643 3300009093 Bacteria 12229
19 Ga0105245_10044360 3300009098 Bacteria 3968
20 Ga0105247_10033271 3300009101 Bacteria 3135
21 Ga0105241_10070522 3300009174 Bacteria 2711
22 Ga0105239_10426796 3300010375 Bacteria 1502
23 Ga0105239_11009093 3300010375 Bacteria 957
24 Ga0206353_11522802 3300020082 Bacteria 5291
25 Ga0209565_1000065 3300025263 Bacteria 178266
26 Ga0209673_1000818 3300025273 Bacteria 41077
27 Ga0209675_1011473 3300025291 Bacteria 2935
28 Ga0209564_1029995 3300025295 Bacteria 1695
29 Ga0209758_1007662 3300025297 Bacteria 7273
30 Ga0209256_1006902 3300025299 Bacteria 5815
31 Ga0207647_10044499 3300025904 Bacteria 2773
32 Ga0207695_10054247 3300025913 Bacteria 4188
33 Ga0207671_10216545 3300025914 Bacteria 1499
34 Ga0207687_10026532 3300025927 Bacteria 3879
35 Ga0207664_10255115 3300025929 Bacteria 1532
36 Ga0207702_10017560 3300026078 Bacteria 5919
37 Ga0207676_10386035 3300026095 Bacteria 1305
38 Ga0207698_10032126 3300026142 Bacteria 3799
39 Ga0307408_100158720 3300031548 Bacteria 1794
40 Ga0307516_10271191 3300031730 Bacteria 1383
41 Ga0307405_10076933 3300031731 Bacteria 2167
42 Ga0307410_10077159 3300031852 Bacteria 2328
43 Ga0326468_10000268 3300031889 Bacteria 5477
44 Ga0307406_10026729 3300031901 Bacteria 3470
45 Ga0307407_10059681 3300031903 Bacteria 2222
46 Ga0307409_100136682 3300031995 Bacteria 2104
47 Ga0307416_100002764 3300032002 Bacteria 10184
48 Ga0307414_10166816 3300032004 Bacteria 1756
49 Ga0307411_10089937 3300032005 Bacteria 2140
50 Ga0307415_100182340 3300032126 Bacteria 1648
51 Ga0307415_100213775 3300032126 Bacteria 1540
52 Ga0436365_1699939 3300039437 Bacteria 1914
53 Ga0451802_0524769 3300041460 Bacteria 1266
54 Ga0450900_015613 3300042136 Bacteria 1022
55 Ga0439459_0020226 3300042438 Bacteria 1269
56 Ga0466969_0022169 3300044656 Bacteria 3281
57 Ga0466969_0030096 3300044656 Bacteria 2768
58 Ga0466969_0044749 3300044656 Bacteria 2200
59 Ga0466969_0101955 3300044656 Bacteria 1350
60 Ga0466972_0144636 3300044658 Bacteria 1119
61 Ga0466965_0035784 3300044683 Bacteria 2433
62 Ga0466966_0001272 3300044684 Bacteria 16152
63 Ga0466966_0005535 3300044684 Bacteria 8299
64 Ga0466966_0038234 3300044684 Bacteria 3093
65 Ga0466966_0041504 3300044684 Bacteria 2957
66 Ga0466966_0078879 3300044684 Bacteria 2053
67 Ga0466966_0098346 3300044684 Bacteria 1812
68 Ga0466966_0112176 3300044684 Bacteria 1680
69 Ga0466966_0273674 3300044684 Bacteria 1016
70 Ga0466961_0014334 3300044693 Bacteria 5086
71 Ga0466961_0048480 3300044693 Bacteria 2715
72 Ga0466961_0062300 3300044693 Bacteria 2370
73 Ga0466961_0082186 3300044693 Bacteria 2038
74 Ga0466961_0088988 3300044693 Bacteria 1950
75 Ga0466961_0137021 3300044693 Bacteria 1533
76 Ga0466963_0005140 3300044694 Bacteria 7640
77 Ga0466963_0014629 3300044694 Bacteria 4842
78 Ga0466963_0122781 3300044694 Bacteria 1789
79 Ga0466964_0146347 3300044706 Bacteria 1091
80 Ga0466971_0054688 3300044719 Bacteria 1799
81 Ga0466970_0026288 3300044765 Bacteria 3051
82 Ga0466970_0045420 3300044765 Bacteria 2339
83 Ga0466970_0068248 3300044765 Bacteria 1910
84 Ga0466957_0096332 3300044842 Bacteria 1859
85 Ga0466957_0265284 3300044842 Bacteria 1145
86 Ga0466960_0025123 3300044901 Bacteria 2693
87 Ga0466959_0013614 3300045049 Bacteria 5899
88 Ga0466959_0035565 3300045049 Bacteria 3683
89 Ga0466959_0111457 3300045049 Bacteria 1952
90 Ga0466959_0116127 3300045049 Bacteria 1906
91 Ga0466959_0213535 3300045049 Bacteria 1340
92 Ga0466959_0278349 3300045049 Bacteria 1149
93 Ga0466959_0294867 3300045049 Bacteria 1111
94 Ga0466958_0006846 3300045836 Bacteria 6230
95 Ga0466958_0019662 3300045836 Bacteria 3931
96 Ga0466958_0026803 3300045836 Bacteria 3406
97 Ga0466958_0032800 3300045836 Bacteria 3091
98 Ga0466958_0036853 3300045836 Bacteria 2929
99 Ga0466967_0000481 3300045976 Bacteria 19332
100 Ga0466967_0000706 3300045976 Bacteria 17012
101 Ga0466967_0011163 3300045976 Bacteria 6786
102 Ga0466967_0019423 3300045976 Bacteria 5463
103 Ga0466967_0027234 3300045976 Bacteria 4752
104 Ga0466967_0046147 3300045976 Bacteria 3791
105 Ga0466967_0049457 3300045976 Bacteria 3676
106 Ga0466967_0073417 3300045976 Bacteria 3069
107 Ga0466967_0114830 3300045976 Bacteria 2479
108 Ga0466967_0148226 3300045976 Bacteria 2190
109 Ga0466967_0304944 3300045976 Bacteria 1533
110 Ga0466967_0513998 3300045976 Bacteria 1176
111 Ga0495590_0012859 3300046457 Bacteria 3090
112 Ga0495581_0186742 3300047315 Bacteria 1212
113 Ga0495686_0021243 3300047472 Bacteria 4314
114 Ga0496102_0000072 3300048905 Bacteria 150284
115 Ga0496102_0023161 3300048905 Bacteria 5512
116 Ga0496103_0000158 3300048906 Bacteria 71302
117 Ga0496104_0242485 3300048907 Bacteria 1715
118 Ga0496109_0011991 3300048912 Bacteria 7465
119 Ga0496110_0041827 3300048913 Bacteria 4000
120 Ga0496111_0033938 3300048914 Bacteria 3641
121 Ga0496113_0170372 3300048916 Bacteria 1724
122 Ga0496115_0013261 3300048918 Bacteria 6229
123 Ga0496118_0013193 3300048921 Bacteria 7838
124 Ga0496119_0001082 3300048922 Bacteria 34402
125 Ga0496119_0031500 3300048922 Bacteria 3555
126 Ga0496120_0010792 3300048923 Bacteria 6328
127 Ga0496121_0007741 3300048924 Bacteria 12878
128 Ga0496121_0070785 3300048924 Bacteria 2808
129 Ga0501031_0003375 3300049568 Bacteria 10260
130 Ga0501032_0013449 3300049569 Bacteria 5820
131 Ga0501034_0032267 3300049571 Bacteria 5321
132 Ga0501034_0207777 3300049571 Bacteria 1914
133 Ga0501038_0000154 3300049574 Bacteria 58853
134 Ga0501043_0160722 3300049579 Bacteria 1755
135 Ga0501046_0048469 3300049580 Bacteria 3364
136 Ga0501047_0003168 3300049581 Bacteria 15594
137 Ga0501048_0000017 3300049582 Bacteria 72572
138 Ga0501070_0013251 3300049586 Bacteria 6950
139 Ga0501070_0098867 3300049586 Bacteria 2414
140 Ga0501070_0234020 3300049586 Bacteria 1505
141 Ga0501080_0171795 3300049742 Bacteria 1999
142 Ga0501035_0014548 3300049822 Bacteria 7265
143 Ga0501044_0012373 3300049823 Bacteria 9237
144 Ga0501044_0118752 3300049823 Bacteria 2647
145 Ga0501082_0661425 3300060353 Bacteria 914
146 Ga0466962_0003674 3300061719 Bacteria 7314
147 Ga0466962_0070740 3300061719 Bacteria 1667

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049742 Ga0501080_0171795 Ga0501080_0171795_642_1295 203
2 3300044765 Ga0466970_0045420 Ga0466970_0045420_1598_2296 206
3 3300048905 Ga0496102_0023161 Ga0496102_0023161_60_761 215
4 3300045049 Ga0466959_0278349 Ga0466959_0278349_141_875 220
5 3300044706 Ga0466964_0146347 Ga0466964_0146347_219_1076 223
6 3300045836 Ga0466958_0032800 Ga0466958_0032800_103_960 223
7 3300045976 Ga0466967_0011163 Ga0466967_0011163_103_960 223
8 3300009101 Ga0105247_10033271 Ga0105247_100332712 224
9 3300048905 Ga0496102_0000072 Ga0496102_0000072_35309_36037 224
10 3300048906 Ga0496103_0000158 Ga0496103_0000158_42643_43371 224
11 3300048921 Ga0496118_0013193 Ga0496118_0013193_6147_6875 224
12 3300048922 Ga0496119_0031500 Ga0496119_0031500_1731_2459 224
13 3300048924 Ga0496121_0070785 Ga0496121_0070785_1783_2511 224
14 3300044658 Ga0466972_0144636 Ga0466972_0144636_54_896 229
15 3300044656 Ga0466969_0022169 Ga0466969_0022169_1010_1798 231
16 3300045049 Ga0466959_0213535 Ga0466959_0213535_44_802 231
17 3300042136 Ga0450900_015613 Ga0450900_015613_25_804 232
18 3300045976 Ga0466967_0114830 Ga0466967_0114830_1524_2306 232
19 iso_pu_bacteria 2643221647 2644267643 232
20 iso_pu_bacteria 2954691527 2954698474 232
21 iso_pu_bacteria 2954701450 2954703748 232
22 3300005327 Ga0070658_10427310 Ga0070658_104273101 233
23 3300031730 Ga0307516_10271191 Ga0307516_102711912 234
24 3300044684 Ga0466966_0078879 Ga0466966_0078879_232_993 234
25 iso_pu_bacteria 2784746768 2785368077 234
26 3300006038 Ga0075365_10148351 Ga0075365_101483513 235
27 3300003578 Ga0006562J51391_1106264 Ga0006562J51391_11062646 236
28 3300041460 Ga0451802_0524769 Ga0451802_0524769_108_908 236
29 3300044656 Ga0466969_0101955 Ga0466969_0101955_514_1314 236
30 3300044901 Ga0466960_0025123 Ga0466960_0025123_372_1217 236
31 3300046457 Ga0495590_0012859 Ga0495590_0012859_1547_2350 236
32 3300049823 Ga0501044_0118752 Ga0501044_0118752_1464_2261 236
33 3300005985 Ga0081539_10001291 Ga0081539_1000129124 239
34 3300044684 Ga0466966_0098346 Ga0466966_0098346_135_959 239
35 3300044693 Ga0466961_0088988 Ga0466961_0088988_37_861 239
36 3300047315 Ga0495581_0186742 Ga0495581_0186742_256_1065 239
37 3300005614 Ga0068856_100335953 Ga0068856_1003359531 240
38 3300009093 Ga0105240_10011643 Ga0105240_100116436 240
39 3300025913 Ga0207695_10054247 Ga0207695_100542472 240
40 3300025914 Ga0207671_10216545 Ga0207671_102165452 240
41 3300026078 Ga0207702_10017560 Ga0207702_100175606 240
42 3300031889 Ga0326468_10000268 Ga0326468_100002683 240
43 3300039437 Ga0436365_1699939 Ga0436365_1699939_18_800 240
44 3300044684 Ga0466966_0005535 Ga0466966_0005535_1735_2529 240
45 3300044693 Ga0466961_0062300 Ga0466961_0062300_132_962 240
46 3300044694 Ga0466963_0014629 Ga0466963_0014629_3840_4631 240
47 3300044694 Ga0466963_0122781 Ga0466963_0122781_163_954 240
48 3300044719 Ga0466971_0054688 Ga0466971_0054688_327_1118 240
49 3300044842 Ga0466957_0096332 Ga0466957_0096332_541_1332 240
50 3300045049 Ga0466959_0111457 Ga0466959_0111457_300_1094 240
51 3300045836 Ga0466958_0006846 Ga0466958_0006846_2159_2950 240
52 3300045976 Ga0466967_0019423 Ga0466967_0019423_1816_2607 240
53 3300061719 Ga0466962_0070740 Ga0466962_0070740_773_1564 240
54 3300005327 Ga0070658_10267498 Ga0070658_102674981 241
55 3300005436 Ga0070713_100611755 Ga0070713_1006117551 241
56 3300009098 Ga0105245_10044360 Ga0105245_100443602 241
57 3300020082 Ga0206353_11522802 Ga0206353_115228025 241
58 3300025927 Ga0207687_10026532 Ga0207687_100265322 241
59 3300031548 Ga0307408_100158720 Ga0307408_1001587202 241
60 3300031731 Ga0307405_10076933 Ga0307405_100769332 241
61 3300031852 Ga0307410_10077159 Ga0307410_100771593 241
62 3300031901 Ga0307406_10026729 Ga0307406_100267292 241
63 3300031903 Ga0307407_10059681 Ga0307407_100596813 241
64 3300031995 Ga0307409_100136682 Ga0307409_1001366821 241
65 3300032002 Ga0307416_100002764 Ga0307416_1000027643 241
66 3300032004 Ga0307414_10166816 Ga0307414_101668162 241
67 3300032005 Ga0307411_10089937 Ga0307411_100899372 241
68 3300032126 Ga0307415_100182340 Ga0307415_1001823403 241
69 3300032126 Ga0307415_100213775 Ga0307415_1002137753 241
70 3300042438 Ga0439459_0020226 Ga0439459_0020226_19_843 241
71 3300044684 Ga0466966_0112176 Ga0466966_0112176_835_1629 241
72 3300045976 Ga0466967_0000706 Ga0466967_0000706_378_1157 241
73 3300048924 Ga0496121_0007741 Ga0496121_0007741_7681_8469 241
74 3300049568 Ga0501031_0003375 Ga0501031_0003375_8041_8841 241
75 3300049569 Ga0501032_0013449 Ga0501032_0013449_2080_2880 241
76 3300049571 Ga0501034_0032267 Ga0501034_0032267_3473_4273 241
77 3300049571 Ga0501034_0207777 Ga0501034_0207777_116_895 241
78 3300049574 Ga0501038_0000154 Ga0501038_0000154_28638_29438 241
79 3300049579 Ga0501043_0160722 Ga0501043_0160722_799_1599 241
80 3300049580 Ga0501046_0048469 Ga0501046_0048469_1826_2626 241
81 3300049581 Ga0501047_0003168 Ga0501047_0003168_12560_13360 241
82 3300049582 Ga0501048_0000017 Ga0501048_0000017_32363_33163 241
83 3300049586 Ga0501070_0013251 Ga0501070_0013251_4055_4855 241
84 3300049822 Ga0501035_0014548 Ga0501035_0014548_3412_4212 241
85 3300049823 Ga0501044_0012373 Ga0501044_0012373_751_1551 241
86 3300060353 Ga0501082_0661425 Ga0501082_0661425_18_818 241
87 3300005616 Ga0068852_100031304 Ga0068852_1000313045 242
88 3300005617 Ga0068859_100010573 Ga0068859_1000105735 242
89 3300006931 Ga0097620_100010573 Ga0097620_1000105737 242
90 3300009174 Ga0105241_10070522 Ga0105241_100705221 242
91 3300010375 Ga0105239_10426796 Ga0105239_104267962 242
92 3300025904 Ga0207647_10044499 Ga0207647_100444992 242
93 3300026142 Ga0207698_10032126 Ga0207698_100321265 242
94 3300044656 Ga0466969_0030096 Ga0466969_0030096_526_1368 242
95 3300044684 Ga0466966_0001272 Ga0466966_0001272_5132_5974 242
96 3300044684 Ga0466966_0038234 Ga0466966_0038234_1952_2758 242
97 3300044693 Ga0466961_0048480 Ga0466961_0048480_850_1656 242
98 3300044693 Ga0466961_0137021 Ga0466961_0137021_631_1473 242
99 3300045049 Ga0466959_0116127 Ga0466959_0116127_778_1620 242
100 3300045049 Ga0466959_0294867 Ga0466959_0294867_103_927 243
101 3300045976 Ga0466967_0073417 Ga0466967_0073417_648_1445 243
102 3300045976 Ga0466967_0148226 Ga0466967_0148226_869_1666 243
103 3300005435 Ga0070714_100305831 Ga0070714_1003058312 244
104 3300010375 Ga0105239_11009093 Ga0105239_110090931 244
105 3300025929 Ga0207664_10255115 Ga0207664_102551152 244
106 3300026095 Ga0207676_10386035 Ga0207676_103860352 244
107 3300044656 Ga0466969_0044749 Ga0466969_0044749_479_1321 244
108 3300044683 Ga0466965_0035784 Ga0466965_0035784_1422_2270 244
109 3300044684 Ga0466966_0041504 Ga0466966_0041504_1537_2367 244
110 3300044684 Ga0466966_0273674 Ga0466966_0273674_85_933 244
111 3300044693 Ga0466961_0014334 Ga0466961_0014334_3456_4286 244
112 3300044693 Ga0466961_0082186 Ga0466961_0082186_763_1593 244
113 3300044694 Ga0466963_0005140 Ga0466963_0005140_6462_7343 244
114 3300044765 Ga0466970_0026288 Ga0466970_0026288_648_1496 244
115 3300044765 Ga0466970_0068248 Ga0466970_0068248_327_1157 244
116 3300044842 Ga0466957_0265284 Ga0466957_0265284_199_1038 244
117 3300045049 Ga0466959_0013614 Ga0466959_0013614_3200_4030 244
118 3300045049 Ga0466959_0035565 Ga0466959_0035565_882_1724 244
119 3300045836 Ga0466958_0019662 Ga0466958_0019662_699_1529 244
120 3300045836 Ga0466958_0026803 Ga0466958_0026803_2403_3233 244
121 3300045836 Ga0466958_0036853 Ga0466958_0036853_1565_2446 244
122 3300045976 Ga0466967_0000481 Ga0466967_0000481_5197_6027 244
123 3300045976 Ga0466967_0027234 Ga0466967_0027234_1877_2710 244
124 3300045976 Ga0466967_0046147 Ga0466967_0046147_2346_3182 244
125 3300045976 Ga0466967_0049457 Ga0466967_0049457_946_1827 244
126 3300045976 Ga0466967_0304944 Ga0466967_0304944_74_913 244
127 3300045976 Ga0466967_0513998 Ga0466967_0513998_40_882 244
128 3300048907 Ga0496104_0242485 Ga0496104_0242485_762_1562 244
129 3300048912 Ga0496109_0011991 Ga0496109_0011991_5771_6571 244
130 3300048913 Ga0496110_0041827 Ga0496110_0041827_2820_3620 244
131 3300048914 Ga0496111_0033938 Ga0496111_0033938_1757_2557 244
132 3300048916 Ga0496113_0170372 Ga0496113_0170372_178_978 244
133 3300048922 Ga0496119_0001082 Ga0496119_0001082_6195_7040 244
134 3300048923 Ga0496120_0010792 Ga0496120_0010792_3811_4656 244
135 3300049586 Ga0501070_0098867 Ga0501070_0098867_527_1360 244
136 3300049586 Ga0501070_0234020 Ga0501070_0234020_369_1202 244
137 3300061719 Ga0466962_0003674 Ga0466962_0003674_5195_6043 244
138 3300003320 rootH2_10081088 rootH2_100810881 248
139 3300003322 rootL2_10145984 rootL2_101459843 248
140 3300025295 Ga0209564_1029995 Ga0209564_10299952 248
141 3300047472 Ga0495686_0021243 Ga0495686_0021243_2040_2834 248
142 3300003215 JGI25153J46596_10017695 JGI25153J46596_100176952 249
143 3300003773 Ga0055537_1001899 Ga0055537_10018994 249
144 3300003790 Ga0055528_1012800 Ga0055528_10128003 249
145 3300005262 Ga0065165_1004816 Ga0065165_10048161 249
146 3300025263 Ga0209565_1000065 Ga0209565_1000065108 249
147 3300025273 Ga0209673_1000818 Ga0209673_100081817 249
148 3300025291 Ga0209675_1011473 Ga0209675_10114732 249
149 3300025297 Ga0209758_1007662 Ga0209758_10076625 249
150 3300025299 Ga0209256_1006902 Ga0209256_10069022 249
151 3300048918 Ga0496115_0013261 Ga0496115_0013261_2994_3773 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02163

Peptidase_M50

Peptidase family M50

65

253

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ib0-assembly1.cif.gz_A crystal structure of a conserved hypothetical protein, rv2844, from mycobacterium tuberculosis 0.321 21 192
2ib0-assembly1.cif.gz_A crystal structure of a conserved hypothetical protein, rv2844, from mycobacterium tuberculosis 0.3028 21 192
4to9-assembly1.cif.gz_E 2.0a resolution structure of bfrb (n148l) from pseudomonas aeruginosa 0.2977 35 198
5d8q-assembly1.cif.gz_A 2.20a resolution structure of bfrb (l68a) from pseudomonas aeruginosa 0.2963 35 198
4tob-assembly1.cif.gz_E 1.95a resolution structure of bfrb (q151l) from pseudomonas aeruginosa 0.2914 35 202
ID Description Score Start End Superfamily
5d57A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.5265 15 103 1.10.287.3610
4uxzB00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4869 15 103 1.10.287.3610
4uxzB00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4249 15 103 1.10.287.3610
5d57A00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4043 15 103 1.10.287.3610
2ib0B00 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.3382 23 185 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A2D2AVJ5-F1-model_v4 Site-2 protease family protein 0.9527 15 247 GO:0005886
GO:0006508
GO:0008237
GO:0046872
AF-A0A7C8HHQ8-F1-model_v4 Site-2 protease family protein 0.9503 15 249 GO:0005886
GO:0006508
GO:0008236
GO:0008237
GO:0046872
AF-A0A428X348-F1-model_v4 Site-2 protease family protein 0.9474 15 247 GO:0005886
GO:0006508
GO:0008237
GO:0046872
AF-A0A3G9A1A5-F1-model_v4 Site-2 protease family protein 0.9449 19 247 GO:0005886
GO:0006508
GO:0008237
GO:0046872
AF-A0A7C4K272-F1-model_v4 Site-2 protease family protein 0.9425 38 247 GO:0005886
GO:0006508
GO:0008237
GO:0046872

Feature Viewer

pLDDT pTM Quality
81.95 0.8 High
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Predicted Structure (AlphaFold2)

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