F209974

General Info

Members Datasets Scaffolds Average Seq Length
150 125 300 337

Family's Representative Sequence

Representative Sequence 3300049824|Ga0501045_0022648|Ga0501045_0022648_1177_2316
Length 370
Sequence LAERLILELEGVETFLGGEPVRAVAGVSLAVREGEILGIVGESGCGKTTLGRTILGIQRETSGTIRLDGRVVSGLGPHAARRVRRDIQYVHQDAAGALDPWWSVGRSLDEALRINAVGPQAEREARIDRMLEAVGLEPALKRRYPHELSGGQLRRVTLARVLVLGPRIVVLDEPTSGLDLSVQATVLRLLRDLLHQLGLTYLFISHDLSVVRQMCGRVAIMYLGRIVEMAETRQIFEAPRHPYTQVLLSAAPRLVTGQDLDAIPIHGEPPSPTAVPSGCAFRTRCVHAAPRCADAVPVLEPVGDLGGPHDGRRSVGEEGRVVPDVAWRVACHRWREINPAGDLPPDEATGAVRTAGAPPGPRPEPRRTVR

Samples

Sample ID Description Type Environment
1 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
4 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
32 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
33 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
34 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
35 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
47 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
48 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
49 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
50 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
51 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
52 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
55 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
60 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
65 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
66 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
67 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
70 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
73 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
74 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
79 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
82 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
91 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
96 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
101 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
102 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
104 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
105 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
106 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
107 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
108 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
109 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
110 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
111 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
112 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
113 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
114 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
117 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
118 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
119 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
120 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
121 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
122 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
124 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
125 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.67
Metatranscriptomes 0
Isolates 1.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.67
Nodule 0
Rhizoplane 5.33
Rhizosphere 68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501045_0022648 3300049824 Bacteria 4500
2 Ga0070680_100115155 3300005336 Bacteria 2240
3 Ga0070671_100193929 3300005355 Bacteria 1722
4 Ga0070674_100116806 3300005356 Bacteria 1969
5 Ga0070713_100102886 3300005436 Bacteria 2478
6 Ga0070708_100222186 3300005445 Bacteria 1771
7 Ga0070707_100008347 3300005468 Bacteria 9617
8 Ga0070698_100009887 3300005471 Bacteria 10198
9 Ga0070698_100014693 3300005471 Bacteria 8269
10 Ga0070699_100027887 3300005518 Bacteria 4870
11 Ga0070699_100078291 3300005518 Bacteria 2879
12 Ga0070697_100070281 3300005536 Bacteria 2870
13 Ga0068853_100299026 3300005539 Bacteria 1487
14 Ga0070695_100116053 3300005545 Bacteria 1825
15 Ga0070696_100001847 3300005546 Bacteria 13904
16 Ga0068860_100027026 3300005843 Bacteria 5529
17 Ga0081455_10000551 3300005937 Bacteria 48719
18 Ga0081455_10012944 3300005937 Bacteria 8275
19 Ga0081540_1000479 3300005983 Bacteria 39170
20 Ga0081539_10002330 3300005985 Bacteria 27346
21 Ga0081539_10075666 3300005985 Bacteria 1787
22 Ga0070717_10003535 3300006028 Bacteria 11207
23 Ga0070717_10036833 3300006028 Bacteria 3970
24 Ga0075362_10006883 3300006177 Bacteria 4261
25 Ga0075367_10064521 3300006178 Bacteria 2191
26 Ga0075367_10071661 3300006178 Bacteria 2085
27 Ga0075369_10000111 3300006186 Bacteria 22081
28 Ga0075428_100184957 3300006844 Bacteria 2255
29 Ga0075431_100270352 3300006847 Bacteria 1722
30 Ga0075433_10012661 3300006852 Bacteria 6824
31 Ga0075434_100009586 3300006871 Bacteria 9040
32 Ga0075434_100051159 3300006871 Bacteria 4105
33 Ga0075436_100008208 3300006914 Bacteria 7146
34 Ga0099795_10016535 3300007788 Bacteria 2335
35 Ga0111539_10186978 3300009094 Bacteria 2419
36 Ga0105245_10446157 3300009098 Bacteria 1301
37 Ga0105238_10004739 3300009551 Bacteria 13454
38 Ga0099796_10002952 3300010159 Bacteria 3849
39 Ga0213872_10029918 3300021361 Bacteria 2498
40 Ga0213875_10001790 3300021388 Bacteria 13425
41 Ga0213875_10002423 3300021388 Bacteria 11182
42 Ga0213871_10026535 3300021441 Bacteria 1483
43 Ga0207707_10302153 3300025912 Bacteria 1384
44 Ga0207660_10067007 3300025917 Bacteria 2599
45 Ga0207646_10023373 3300025922 Bacteria 5679
46 Ga0207646_10112906 3300025922 Bacteria 2439
47 Ga0207664_10127057 3300025929 Bacteria 2142
48 Ga0207644_10126778 3300025931 Bacteria 1949
49 Ga0207670_10106695 3300025936 Bacteria 2010
50 Ga0207669_10127280 3300025937 Bacteria 1743
51 Ga0207708_10039789 3300026075 Bacteria 3583
52 Ga0207683_10349997 3300026121 Bacteria 1356
53 Ga0209179_1010713 3300027512 Bacteria 1605
54 Ga0268264_10081037 3300028381 Bacteria 2773
55 Ga0373928_0025532 3300035084 Bacteria 1275
56 Ga0373940_0041524 3300035088 Bacteria 1265
57 Ga0373949_0018205 3300035090 Bacteria 1591
58 Ga0373936_0041608 3300035113 Bacteria 1844
59 Ga0373953_0062683 3300035117 Bacteria 1522
60 Ga0373960_0008705 3300035121 Bacteria 2440
61 Ga0373942_0049539 3300035207 Bacteria 1173
62 Ga0373931_0001206 3300035691 Bacteria 11056
63 Ga0373931_0020762 3300035691 Bacteria 3289
64 Ga0373931_0071166 3300035691 Bacteria 1899
65 Ga0316584_0002137 3300036712 Bacteria 12374
66 Ga0373925_0224174 3300037068 Bacteria 1501
67 Ga0373925_0411850 3300037068 Bacteria 1103
68 Ga0436364_0259249 3300037853 Bacteria 81192
69 Ga0436364_0472326 3300037853 Bacteria 30538
70 Ga0436364_1527374 3300037853 Bacteria 1328
71 Ga0395901_0171905 3300038443 Bacteria 2273
72 Ga0395901_0398908 3300038443 Bacteria 1413
73 Ga0436365_1002013 3300039437 Bacteria 2283
74 Ga0436360_0633083 3300039438 Bacteria 3791
75 Ga0436361_0038487 3300039447 Bacteria 3073
76 Ga0466963_0082783 3300044694 Bacteria 2176
77 Ga0466963_0165738 3300044694 Bacteria 1539
78 Ga0466964_0078063 3300044706 Bacteria 1415
79 Ga0466967_0038171 3300045976 Bacteria 4117
80 Ga0466967_0269438 3300045976 Bacteria 1631
81 Ga0495653_0048657 3300046463 Bacteria 3272
82 Ga0495580_0237895 3300046472 Bacteria 1249
83 Ga0495608_0006103 3300046511 Bacteria 8550
84 Ga0495630_0011048 3300046517 Bacteria 6531
85 Ga0495640_0004264 3300046533 Bacteria 11434
86 Ga0495674_0001328 3300047319 Bacteria 24089
87 Ga0495672_0029058 3300047320 Bacteria 3487
88 Ga0495676_0196944 3300047321 Bacteria 1402
89 Ga0495680_0017701 3300047322 Bacteria 6070
90 Ga0495673_0076534 3300047469 Bacteria 1395
91 Ga0496101_0031577 3300048904 Bacteria 3725
92 Ga0496104_0079500 3300048907 Bacteria 3125
93 Ga0496109_0023397 3300048912 Bacteria 5485
94 Ga0496110_0037939 3300048913 Bacteria 4190
95 Ga0496112_0084813 3300048915 Bacteria 3134
96 Ga0496114_0102525 3300048917 Bacteria 2445
97 Ga0496114_0126782 3300048917 Bacteria 2201
98 Ga0496115_0036948 3300048918 Bacteria 3869
99 Ga0496121_0000657 3300048924 Bacteria 64819
100 Ga0496122_0018154 3300048925 Bacteria 6516
101 Ga0496126_0030535 3300048929 Bacteria 5103
102 Ga0496126_0080414 3300048929 Bacteria 2884
103 Ga0501034_0040845 3300049571 Bacteria 4694
104 Ga0501036_0027332 3300049572 Bacteria 4821
105 Ga0501040_0227532 3300049576 Bacteria 1328
106 Ga0501043_0051544 3300049579 Bacteria 3234
107 Ga0501047_0017836 3300049581 Bacteria 6800
108 Ga0501047_0260275 3300049581 Bacteria 1583
109 Ga0501070_0170113 3300049586 Bacteria 1795
110 Ga0501074_0072337 3300049590 Bacteria 2477
111 Ga0501075_0069626 3300049591 Bacteria 2659
112 Ga0501081_0041852 3300049743 Bacteria 3139
113 Ga0501035_0352431 3300049822 Bacteria 1231
114 Ga0501044_0249332 3300049823 Bacteria 1717
115 nmdc:mga03683_32478_c1 3300050489 Bacteria 2100
116 nmdc:mga03683_4732_c1 3300050489 Bacteria 4541
117 nmdc:mga06z11_131335_c1 3300050494 Bacteria 1407
118 nmdc:mga0qj67_42888_c1 3300050509 Bacteria 3562
119 nmdc:mga06r32_17843_c2 3300050510 Bacteria 6166
120 nmdc:mga08y16_113754_c1 3300050511 Bacteria 2817
121 nmdc:mga0n895_29427_c1 3300050512 Bacteria 5239
122 nmdc:mga0n895_404399_c1 3300050512 Bacteria 1381
123 nmdc:mga0a205_5645_c1 3300050515 Bacteria 11268
124 nmdc:mga0sz30_2413_c1 3300050516 Bacteria 6666
125 nmdc:mga0sz30_37223_c1 3300050516 Bacteria 2036
126 Ga0495619_0026907 3300053085 Bacteria 3703
127 Ga0495619_0034651 3300053085 Bacteria 3283
128 Ga0500647_0014034 3300053091 Bacteria 3634
129 Ga0500566_0000080 3300053094 Bacteria 47299
130 Ga0500640_001757 3300053095 Bacteria 6788
131 Ga0500641_0005767 3300053096 Bacteria 4388
132 Ga0500572_000316 3300053111 Bacteria 17232
133 Ga0500595_006985 3300053119 Bacteria 4734
134 Ga0500608_018322 3300053122 Bacteria 3192
135 Ga0500614_002476 3300053123 Bacteria 4112
136 Ga0500559_0001150 3300053136 Bacteria 15947
137 Ga0500559_0110689 3300053136 Bacteria 1272
138 Ga0500568_0008740 3300053139 Bacteria 4858
139 Ga0500603_000064 3300053150 Bacteria 24659
140 Ga0500616_0000404 3300053153 Bacteria 59183
141 Ga0500639_000017 3300053163 Bacteria 114464
142 Ga0500636_0014626 3300053177 Bacteria 4614
143 Ga0500637_0020422 3300053178 Bacteria 3587
144 Ga0500576_107486 3300053725 Bacteria 1125
145 Ga0500552_000212 3300053733 Bacteria 5224
146 Ga0500601_001607 3300053737 Bacteria 2445
147 Ga0501084_0258495 3300054114 Bacteria 1470
148 Ga0501082_0164680 3300060353 Bacteria 1927
149 2929200236 2929199973 Bacteria 7260745
150 8055912128 8055909800 Bacteria 7278581
151 Ga0501045_0022648
152 Ga0070680_100115155
153 Ga0070671_100193929
154 Ga0070674_100116806
155 Ga0070713_100102886
156 Ga0070708_100222186
157 Ga0070707_100008347
158 Ga0070698_100009887
159 Ga0070698_100014693
160 Ga0070699_100027887
161 Ga0070699_100078291
162 Ga0070697_100070281
163 Ga0068853_100299026
164 Ga0070695_100116053
165 Ga0070696_100001847
166 Ga0068860_100027026
167 Ga0081455_10000551
168 Ga0081455_10012944
169 Ga0081540_1000479
170 Ga0081539_10002330
171 Ga0081539_10075666
172 Ga0070717_10003535
173 Ga0070717_10036833
174 Ga0075362_10006883
175 Ga0075367_10064521
176 Ga0075367_10071661
177 Ga0075369_10000111
178 Ga0075428_100184957
179 Ga0075431_100270352
180 Ga0075433_10012661
181 Ga0075434_100009586
182 Ga0075434_100051159
183 Ga0075436_100008208
184 Ga0099795_10016535
185 Ga0111539_10186978
186 Ga0105245_10446157
187 Ga0105238_10004739
188 Ga0099796_10002952
189 Ga0213872_10029918
190 Ga0213875_10001790
191 Ga0213875_10002423
192 Ga0213871_10026535
193 Ga0207707_10302153
194 Ga0207660_10067007
195 Ga0207646_10023373
196 Ga0207646_10112906
197 Ga0207664_10127057
198 Ga0207644_10126778
199 Ga0207670_10106695
200 Ga0207669_10127280
201 Ga0207708_10039789
202 Ga0207683_10349997
203 Ga0209179_1010713
204 Ga0268264_10081037
205 Ga0373928_0025532
206 Ga0373940_0041524
207 Ga0373949_0018205
208 Ga0373936_0041608
209 Ga0373953_0062683
210 Ga0373960_0008705
211 Ga0373942_0049539
212 Ga0373931_0001206
213 Ga0373931_0020762
214 Ga0373931_0071166
215 Ga0316584_0002137
216 Ga0373925_0224174
217 Ga0373925_0411850
218 Ga0436364_0259249
219 Ga0436364_0472326
220 Ga0436364_1527374
221 Ga0395901_0171905
222 Ga0395901_0398908
223 Ga0436365_1002013
224 Ga0436360_0633083
225 Ga0436361_0038487
226 Ga0466963_0082783
227 Ga0466963_0165738
228 Ga0466964_0078063
229 Ga0466967_0038171
230 Ga0466967_0269438
231 Ga0495653_0048657
232 Ga0495580_0237895
233 Ga0495608_0006103
234 Ga0495630_0011048
235 Ga0495640_0004264
236 Ga0495674_0001328
237 Ga0495672_0029058
238 Ga0495676_0196944
239 Ga0495680_0017701
240 Ga0495673_0076534
241 Ga0496101_0031577
242 Ga0496104_0079500
243 Ga0496109_0023397
244 Ga0496110_0037939
245 Ga0496112_0084813
246 Ga0496114_0102525
247 Ga0496114_0126782
248 Ga0496115_0036948
249 Ga0496121_0000657
250 Ga0496122_0018154
251 Ga0496126_0030535
252 Ga0496126_0080414
253 Ga0501034_0040845
254 Ga0501036_0027332
255 Ga0501040_0227532
256 Ga0501043_0051544
257 Ga0501047_0017836
258 Ga0501047_0260275
259 Ga0501070_0170113
260 Ga0501074_0072337
261 Ga0501075_0069626
262 Ga0501081_0041852
263 Ga0501035_0352431
264 Ga0501044_0249332
265 nmdc:mga03683_32478_c1
266 nmdc:mga03683_4732_c1
267 nmdc:mga06z11_131335_c1
268 nmdc:mga0qj67_42888_c1
269 nmdc:mga06r32_17843_c2
270 nmdc:mga08y16_113754_c1
271 nmdc:mga0n895_29427_c1
272 nmdc:mga0n895_404399_c1
273 nmdc:mga0a205_5645_c1
274 nmdc:mga0sz30_2413_c1
275 nmdc:mga0sz30_37223_c1
276 Ga0495619_0026907
277 Ga0495619_0034651
278 Ga0500647_0014034
279 Ga0500566_0000080
280 Ga0500640_001757
281 Ga0500641_0005767
282 Ga0500572_000316
283 Ga0500595_006985
284 Ga0500608_018322
285 Ga0500614_002476
286 Ga0500559_0001150
287 Ga0500559_0110689
288 Ga0500568_0008740
289 Ga0500603_000064
290 Ga0500616_0000404
291 Ga0500639_000017
292 Ga0500636_0014626
293 Ga0500637_0020422
294 Ga0500576_107486
295 Ga0500552_000212
296 Ga0500601_001607
297 Ga0501084_0258495
298 Ga0501082_0164680
299 2929200236
300 8055912128

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08352

oligo_HPY

Oligopeptide/dipeptide transporter, C-terminal region

227

292

0.98

PF00005

ABC_tran

ABC transporter

24

176

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9402 20 277
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.938 20 277
7z19-assembly1.cif.gz_I e. coli c-p lyase bound to a single phnk abc domain 0.9366 20 277
7z17-assembly1.cif.gz_J e. coli c-p lyase bound to a phnk abc dimer in an open conformation 0.9343 20 277
4fwi-assembly1.cif.gz_B crystal structure of the nucleotide-binding domain of a dipeptide abc transporter 0.9232 20 333
ID Description Score Start End Superfamily
af_P75796_10_305_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.959 20 280 3.40.50.300
af_Q2FZR1_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9583 20 337 3.40.50.300
af_P0AAG0_1_323_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9554 20 332 3.40.50.300
af_P77268_3_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9524 20 332 3.40.50.300
af_P9WQJ5_2_332_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9518 20 335 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A537WAU2-F1-model_v4 ABC transporter ATP-binding protein 0.9721 41 278 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-A0A2S9BS46-F1-model_v4 Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein 0.9692 34 273 GO:0005524
GO:0005886
GO:0016887
AF-A0A2W7I288-F1-model_v4 Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein 0.9627 20 332 GO:0005524
GO:0005886
GO:0015833
GO:0016887
AF-Q5WLI1-F1-model_v4 Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein 0.9615 23 275 GO:0005524
GO:0005886
GO:0015675
GO:0016887
GO:0055085
AF-A0A6G2QKZ1-F1-model_v4 ATP-binding cassette domain-containing protein 0.9591 20 273 GO:0005524
GO:0016887

Map