F206655

General Info

Members Datasets Scaffolds Average Seq Length
149 99 298 199

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_1281207|Ga0436364_1281207_262_942
Length 226
Sequence MPIPYLWHFFVCGTRVAFHMFTGIVEATGRVEGLVQTAEADSFQLRLETPLAAGLKVGDSLAVNGCCLTAAELRGESIRFDLLSETLRRTNLGELRPGSLVNLERPMAANGRFDGHLVQGHVDAAAEVLAMAPVGRDHRVEVALPAVFARYVVFKGSVAVNGISLTVAELLEASFVLWIIPHTWGVTNLRALKPGERVNLEFDLVAKYVERMMQESSKIGPAPGEA

Samples

Sample ID Description Type Environment
1 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
75 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
81 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
82 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
83 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
84 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
89 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
90 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
91 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
97 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
98 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
99 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.05
Nodule 0
Rhizoplane 0.67
Rhizosphere 85.23
Stem 0
Stem Tuber 0
Unclassified 11.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436364_1281207 3300037853 Bacteria 1831
2 CNXas_1000004 3300000545 Bacteria 49001
3 Ga0070658_10027387 3300005327 Bacteria 4574
4 Ga0070690_100191090 3300005330 Bacteria 1419
5 Ga0070690_100269748 3300005330 Bacteria 1210
6 Ga0070666_10040644 3300005335 Bacteria 3104
7 Ga0070668_100259396 3300005347 Bacteria 1445
8 Ga0070669_100000066 3300005353 Bacteria 105449
9 Ga0070659_100063780 3300005366 Bacteria 2915
10 Ga0070703_10057404 3300005406 Bacteria 1264
11 Ga0070709_10028631 3300005434 Bacteria 3324
12 Ga0070714_100004329 3300005435 Bacteria 10706
13 Ga0070714_100148214 3300005435 Bacteria 2112
14 Ga0070714_100370344 3300005435 Unclassified 1349
15 Ga0070713_100044309 3300005436 Bacteria 3641
16 Ga0070713_100656414 3300005436 Bacteria 999
17 Ga0070701_10000368 3300005438 Bacteria 15050
18 Ga0070705_100348819 3300005440 Bacteria 1078
19 Ga0070708_100008154 3300005445 Bacteria 8403
20 Ga0070708_100010016 3300005445 Bacteria 7669
21 Ga0070708_100491540 3300005445 Unclassified 1157
22 Ga0070708_101223007 3300005445 Bacteria 702
23 Ga0070662_100080846 3300005457 Unclassified 2420
24 Ga0068867_100771015 3300005459 Archaea 855
25 Ga0070706_100016724 3300005467 Bacteria 6775
26 Ga0070706_100049895 3300005467 Bacteria 3861
27 Ga0070706_100337117 3300005467 Bacteria 1406
28 Ga0070706_100345401 3300005467 Bacteria 1387
29 Ga0070706_100470370 3300005467 Bacteria 1169
30 Ga0070707_100122926 3300005468 Bacteria 2520
31 Ga0070707_100228820 3300005468 Bacteria 1810
32 Ga0070707_100698073 3300005468 Unclassified 977
33 Ga0070698_100004936 3300005471 Bacteria 14633
34 Ga0070698_100023722 3300005471 Bacteria 6409
35 Ga0070698_100064690 3300005471 Bacteria 3684
36 Ga0070698_100119664 3300005471 Bacteria 2594
37 Ga0070698_100258342 3300005471 Bacteria 1674
38 Ga0070698_100370753 3300005471 Bacteria 1364
39 Ga0070698_100936328 3300005471 Bacteria 812
40 Ga0070699_100030646 3300005518 Bacteria 4644
41 Ga0070699_100031369 3300005518 Bacteria 4587
42 Ga0070699_100101999 3300005518 Bacteria 2516
43 Ga0070699_101139552 3300005518 Bacteria 715
44 Ga0070697_100004507 3300005536 Bacteria 10709
45 Ga0070697_100033372 3300005536 Bacteria 4145
46 Ga0070697_100129908 3300005536 Bacteria 2112
47 Ga0070697_100155950 3300005536 Unclassified 1927
48 Ga0070665_100000173 3300005548 Bacteria 114859
49 Ga0068857_100832976 3300005577 Bacteria 882
50 Ga0070702_100001898 3300005615 Bacteria 8767
51 Ga0068862_100000504 3300005844 Bacteria 41607
52 Ga0070717_10000162 3300006028 Bacteria 50425
53 Ga0070717_10056675 3300006028 Bacteria 3238
54 Ga0070717_10088174 3300006028 Bacteria 2614
55 Ga0070717_10151280 3300006028 Bacteria 2008
56 Ga0075362_10000964 3300006177 Bacteria 8805
57 Ga0075366_10008847 3300006195 Bacteria 5609
58 Ga0075370_10037441 3300006353 Bacteria 2728
59 Ga0075428_100563947 3300006844 Bacteria 1217
60 Ga0075434_100019767 3300006871 Bacteria 6521
61 Ga0075434_100692911 3300006871 Bacteria 1036
62 Ga0075429_100510183 3300006880 Unclassified 1054
63 Ga0075436_100050494 3300006914 Bacteria 2870
64 Ga0099794_10139984 3300007265 Bacteria 1225
65 Ga0111539_10158775 3300009094 Unclassified 2645
66 Ga0105245_10003664 3300009098 Bacteria 13716
67 Ga0105242_10278445 3300009176 Bacteria 1518
68 Ga0105248_10353428 3300009177 Bacteria 1654
69 Ga0105239_10218064 3300010375 Bacteria 2139
70 Ga0157369_10131059 3300013105 Bacteria 2657
71 Ga0157374_11085175 3300013296 Bacteria 821
72 Ga0157378_10054285 3300013297 Bacteria 3568
73 Ga0157378_10373325 3300013297 Unclassified 1399
74 Ga0163162_10128038 3300013306 Bacteria 2647
75 Ga0157375_10446686 3300013308 Archaea 1459
76 Ga0157376_10106789 3300014969 Bacteria 2457
77 Ga0213876_10000705 3300021384 Bacteria 23431
78 Ga0213876_10018494 3300021384 Bacteria 3680
79 Ga0207653_10009049 3300025885 Bacteria 3108
80 Ga0207680_10071596 3300025903 Bacteria 2150
81 Ga0207680_10166761 3300025903 Bacteria 1481
82 Ga0207699_10133148 3300025906 Bacteria 1624
83 Ga0207645_10026819 3300025907 Bacteria 3723
84 Ga0207705_10028155 3300025909 Bacteria 4007
85 Ga0207684_10014449 3300025910 Bacteria 6807
86 Ga0207684_10094928 3300025910 Bacteria 2544
87 Ga0207684_10105453 3300025910 Bacteria 2411
88 Ga0207684_10236717 3300025910 Bacteria 1575
89 Ga0207693_10141951 3300025915 Bacteria 1888
90 Ga0207662_10278761 3300025918 Bacteria 1106
91 Ga0207646_10013558 3300025922 Bacteria 7788
92 Ga0207646_10017252 3300025922 Bacteria 6761
93 Ga0207646_10148105 3300025922 Bacteria 2116
94 Ga0207681_10000007 3300025923 Bacteria 483669
95 Ga0207687_10001065 3300025927 Bacteria 18613
96 Ga0207687_11218066 3300025927 Bacteria 647
97 Ga0207700_10659762 3300025928 Bacteria 933
98 Ga0207664_10005990 3300025929 Bacteria 8324
99 Ga0207664_10118414 3300025929 Bacteria 2212
100 Ga0207706_10152266 3300025933 Unclassified 2034
101 Ga0207711_10537787 3300025941 Bacteria 1090
102 Ga0207668_10061234 3300025972 Bacteria 2646
103 Ga0207677_10270843 3300026023 Archaea 1389
104 Ga0207648_10496265 3300026089 Unclassified 1116
105 Ga0207675_100338776 3300026118 Bacteria 1472
106 Ga0207675_100371084 3300026118 Bacteria 1406
107 Ga0268266_10001012 3300028379 Bacteria 35398
108 Ga0268265_10003415 3300028380 Bacteria 11428
109 Ga0265338_10000549 3300028800 Bacteria 65746
110 Ga0265327_10055751 3300031251 Bacteria 2039
111 Ga0307405_10218452 3300031731 Bacteria 1397
112 Ga0307410_10036219 3300031852 Bacteria 3211
113 Ga0307409_100059071 3300031995 Bacteria 2982
114 Ga0307414_10141344 3300032004 Bacteria 1885
115 Ga0307411_10181050 3300032005 Bacteria 1600
116 Ga0307415_101201991 3300032126 Bacteria 714
117 Ga0373929_0124567 3300035085 Bacteria 670
118 Ga0373947_0528889 3300035725 Unclassified 802
119 Ga0436364_0826959 3300037853 Bacteria 4773
120 Ga0436365_0299413 3300039437 Bacteria 2464
121 Ga0436365_0359617 3300039437 Bacteria 40735
122 Ga0436365_0655171 3300039437 Bacteria 48662
123 Ga0436360_0860679 3300039438 Bacteria 956
124 Ga0436361_0349480 3300039447 Bacteria 1662
125 Ga0436361_0379159 3300039447 Unclassified 1509
126 Ga0436361_0529569 3300039447 Bacteria 1218
127 Ga0436361_0847260 3300039447 Bacteria 1043
128 Ga0436363_0159060 3300039450 Bacteria 8605
129 Ga0451843_0620475 3300041509 Bacteria 918
130 Ga0453683_0174940 3300044673 Bacteria 1360
131 Ga0453684_0477217 3300044712 Bacteria 1384
132 Ga0496101_0266525 3300048904 Bacteria 1337
133 Ga0501076_0165911 3300049592 Bacteria 1800
134 nmdc:mga03683_2331_c1 3300050489 Bacteria 5874
135 nmdc:mga03n38_50881_c1 3300050490 Unclassified 1848
136 nmdc:mga0k408_2689_c1 3300050493 Bacteria 9422
137 nmdc:mga0k408_297_c1 3300050493 Bacteria 26903
138 nmdc:mga07m45_552_c2 3300050496 Bacteria 2676
139 nmdc:mga09592_149398_c1 3300050508 Unclassified 2015
140 nmdc:mga08y16_57561_c1 3300050511 Bacteria 4061
141 nmdc:mga0n895_18796_c1 3300050512 Bacteria 6404
142 nmdc:mga0n895_446111_c1 3300050512 Unclassified 1307
143 nmdc:mga0n895_58787_c1 3300050512 Bacteria 3792
144 nmdc:mga0n895_693574_c1 3300050512 Unclassified 1015
145 nmdc:mga0rr50_611445_c1 3300050513 Bacteria 929
146 Ga0500555_000321 3300053103 Bacteria 20635
147 Ga0500556_0000370 3300053104 Bacteria 32830
148 Ga0500642_0017232 3300053130 Bacteria 2764
149 Ga0500658_0045227 3300053134 Unclassified 1779
150 Ga0436364_1281207
151 CNXas_1000004
152 Ga0070658_10027387
153 Ga0070690_100191090
154 Ga0070690_100269748
155 Ga0070666_10040644
156 Ga0070668_100259396
157 Ga0070669_100000066
158 Ga0070659_100063780
159 Ga0070703_10057404
160 Ga0070709_10028631
161 Ga0070714_100004329
162 Ga0070714_100148214
163 Ga0070714_100370344
164 Ga0070713_100044309
165 Ga0070713_100656414
166 Ga0070701_10000368
167 Ga0070705_100348819
168 Ga0070708_100008154
169 Ga0070708_100010016
170 Ga0070708_100491540
171 Ga0070708_101223007
172 Ga0070662_100080846
173 Ga0068867_100771015
174 Ga0070706_100016724
175 Ga0070706_100049895
176 Ga0070706_100337117
177 Ga0070706_100345401
178 Ga0070706_100470370
179 Ga0070707_100122926
180 Ga0070707_100228820
181 Ga0070707_100698073
182 Ga0070698_100004936
183 Ga0070698_100023722
184 Ga0070698_100064690
185 Ga0070698_100119664
186 Ga0070698_100258342
187 Ga0070698_100370753
188 Ga0070698_100936328
189 Ga0070699_100030646
190 Ga0070699_100031369
191 Ga0070699_100101999
192 Ga0070699_101139552
193 Ga0070697_100004507
194 Ga0070697_100033372
195 Ga0070697_100129908
196 Ga0070697_100155950
197 Ga0070665_100000173
198 Ga0068857_100832976
199 Ga0070702_100001898
200 Ga0068862_100000504
201 Ga0070717_10000162
202 Ga0070717_10056675
203 Ga0070717_10088174
204 Ga0070717_10151280
205 Ga0075362_10000964
206 Ga0075366_10008847
207 Ga0075370_10037441
208 Ga0075428_100563947
209 Ga0075434_100019767
210 Ga0075434_100692911
211 Ga0075429_100510183
212 Ga0075436_100050494
213 Ga0099794_10139984
214 Ga0111539_10158775
215 Ga0105245_10003664
216 Ga0105242_10278445
217 Ga0105248_10353428
218 Ga0105239_10218064
219 Ga0157369_10131059
220 Ga0157374_11085175
221 Ga0157378_10054285
222 Ga0157378_10373325
223 Ga0163162_10128038
224 Ga0157375_10446686
225 Ga0157376_10106789
226 Ga0213876_10000705
227 Ga0213876_10018494
228 Ga0207653_10009049
229 Ga0207680_10071596
230 Ga0207680_10166761
231 Ga0207699_10133148
232 Ga0207645_10026819
233 Ga0207705_10028155
234 Ga0207684_10014449
235 Ga0207684_10094928
236 Ga0207684_10105453
237 Ga0207684_10236717
238 Ga0207693_10141951
239 Ga0207662_10278761
240 Ga0207646_10013558
241 Ga0207646_10017252
242 Ga0207646_10148105
243 Ga0207681_10000007
244 Ga0207687_10001065
245 Ga0207687_11218066
246 Ga0207700_10659762
247 Ga0207664_10005990
248 Ga0207664_10118414
249 Ga0207706_10152266
250 Ga0207711_10537787
251 Ga0207668_10061234
252 Ga0207677_10270843
253 Ga0207648_10496265
254 Ga0207675_100338776
255 Ga0207675_100371084
256 Ga0268266_10001012
257 Ga0268265_10003415
258 Ga0265338_10000549
259 Ga0265327_10055751
260 Ga0307405_10218452
261 Ga0307410_10036219
262 Ga0307409_100059071
263 Ga0307414_10141344
264 Ga0307411_10181050
265 Ga0307415_101201991
266 Ga0373929_0124567
267 Ga0373947_0528889
268 Ga0436364_0826959
269 Ga0436365_0299413
270 Ga0436365_0359617
271 Ga0436365_0655171
272 Ga0436360_0860679
273 Ga0436361_0349480
274 Ga0436361_0379159
275 Ga0436361_0529569
276 Ga0436361_0847260
277 Ga0436363_0159060
278 Ga0451843_0620475
279 Ga0453683_0174940
280 Ga0453684_0477217
281 Ga0496101_0266525
282 Ga0501076_0165911
283 nmdc:mga03683_2331_c1
284 nmdc:mga03n38_50881_c1
285 nmdc:mga0k408_2689_c1
286 nmdc:mga0k408_297_c1
287 nmdc:mga07m45_552_c2
288 nmdc:mga09592_149398_c1
289 nmdc:mga08y16_57561_c1
290 nmdc:mga0n895_18796_c1
291 nmdc:mga0n895_446111_c1
292 nmdc:mga0n895_58787_c1
293 nmdc:mga0n895_693574_c1
294 nmdc:mga0rr50_611445_c1
295 Ga0500555_000321
296 Ga0500556_0000370
297 Ga0500642_0017232
298 Ga0500658_0045227

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00677

Lum_binding

Lumazine binding domain

119

203

0.98

PF00677

Lum_binding

Lumazine binding domain

22

106

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9649 1 192
4g6i-assembly1.cif.gz_B crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with roseoflavin 0.9639 1 192
1i8d-assembly1.cif.gz_A crystal structure of riboflavin synthase 0.9617 1 194
4gqn-assembly1.cif.gz_C crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with 5-nitro-6-(d-ribitylamino)-2,4(1h,3h) pyrimidinedione 0.9581 1 192
7wuo-assembly1.cif.gz_C unravelling structure of riboflavin synthase for designing of potential anti-bacterial drug 0.9556 1 193
ID Description Score Start End Superfamily
af_Q2FXG0_101_204_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9759 101 194 2.40.30.20
af_B7FAH8_195_301_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9728 101 193 2.40.30.20
af_B7FAH8_83_182_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9665 1 88 2.40.30.20
af_Q9SKU8_64_151_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9611 1 87 2.40.30.20
4fxuC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9578 101 191 2.40.30.20
ID Description Score Start End GO Terms
AF-A0A2W5Z1A7-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9868 1 196 GO:0004746
GO:0009231
AF-A0A2V5R8T2-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9859 1 193 GO:0004746
GO:0009231
AF-A0A6N6PMH3-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9858 1 193 GO:0004746
GO:0009231
AF-A0A146G8R4-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9857 2 196 GO:0004746
GO:0009231
AF-A0A1Q7HAC6-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9852 9 179 GO:0004746
GO:0009231

Map