F204615

General Info

Members Datasets Scaffolds Average Seq Length
148 107 296 1046

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2929297113|2929299568
Length 1191
Sequence QDHQVVSTLSGGSANSLGASVDNLEASANNPEALRPVQATTRYDDPGDPSHDANHINYSTRTIGFSGKIAAFFLRSKLTPIIVVASLLLGLFAVLTTPREEEPQIVVPMIDVHVAYPTAGAAEVEERVTKPLEQKLYEIKGVEYVYSTSMPGRALVTARFQVGFKSEDAMVQLYNKVMSNMDLMPPGVSQPLVKPKSVDDVSILNLTLWSKTHSDYDLRRVAAVLEDEIRTVPNVSDVQLYGASPRQLRVLVRPEHLAAYKLSLGQLSQILQSANFAADAGPLQQNNYEYMLRAGRVFTTASDVGNLVISTQSGLPVFLRDIATITDGPGDVDNYVLMGQKDGIYPAVTIAVAKQKGTNASTIAEAALKKVEDLKGKVITGDMEMTVTRNYGETASEKATELIEHLLLATASVVLLIGVFLGLRESLVIGVAVPVTLAIALAISQSFGYTLNRVTLFALIFAIGILVDDAIVVVENIHRWFAMRSKFPGLSPADAAIRAVDEVGNPTILATLTVIAVLMPMAFVGGMMGPYMSPIPINASVAMFFSLLVAFIVTPWFAYRFLKHEDKQGHGGPTQSEHDHGESTHGELSHTVSHNSNAFLNVAQPETASLNPQKTPNGNMTPLHEPGTTSPVVTSVSTAHPPENTTTHHPEKHTSGPAGLYTRVMEKLLYRPSVRWGFFAGVAVLLIASMALVYTKDVGMKMLPFDNKSELQIIIDTPEGTTLENTLQAAQAIGAYLGTVNEVTNYQIYAGTGAPFNFNGLVRHYYLRQGGNVADIQVNFIGKKDRQAQSHDIAKRIRPEVHRIAQAFNANAKLVEIPPGPPVMAPLLAEVYGPTPESQRAVAAKVKAIFEQTPGVVDVDWNVEDDQKELTYKVKDKAHLHGISEADITGTLQTAVSGTTVGLLRSTTDLEPVPIILRYPLPQRSLTALQEIRLPSASGAMVPLSELVTVEEKTREKSLHRKNLQPVTYVMADVAGKIEGPVYSMIDMWDAIGQIENEKGQPLEQNLTAQPWLTHVSSLKWDGEWQITYEVFRDLGAAFLIGLVVMYLLIVGWFQSFSVPALIMSPIPLTLIGIIPGHWLLGSFFTATSFIGAIALAGIIVRNSILLVEFAHQRTKEGVDPGPAVVEAGIVRAQPIVLTAAAVVVGAFVILFDPIFQGLAISLIFGTIASTFLTLFIIPMLYYLMMRKKSA

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
45 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
56 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
57 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
58 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
59 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
60 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
63 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
64 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
67 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
68 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
69 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
70 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
71 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
77 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
78 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
79 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
80 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
83 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
103 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
104 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
105 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
106 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
107 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.97
Metatranscriptomes 0.68
Isolates 1.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.35
Rhizosphere 91.22
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10068717 3300005290 Bacteria 9254
2 Ga0065707_10083097 3300005295 Bacteria 10505
3 Ga0065707_10089325 3300005295 Bacteria 4402
4 Ga0070683_100006112 3300005329 Bacteria 10094
5 Ga0070660_100001313 3300005339 Bacteria 16929
6 Ga0070689_100000138 3300005340 Bacteria 41967
7 Ga0070689_100001931 3300005340 Bacteria 13413
8 Ga0070689_100005604 3300005340 Bacteria 8592
9 Ga0070669_100002185 3300005353 Bacteria 14154
10 Ga0070669_100004648 3300005353 Bacteria 9909
11 Ga0070675_100000446 3300005354 Bacteria 28145
12 Ga0070675_100003581 3300005354 Bacteria 11811
13 Ga0070673_100003416 3300005364 Bacteria 9887
14 Ga0070688_100001362 3300005365 Bacteria 12131
15 Ga0070714_100015320 3300005435 Bacteria 6169
16 Ga0070714_100018614 3300005435 Bacteria 5645
17 Ga0070713_100000843 3300005436 Bacteria 19614
18 Ga0070694_100000256 3300005444 Bacteria 28126
19 Ga0068853_100001118 3300005539 Bacteria 18979
20 Ga0070672_100002578 3300005543 Bacteria 11564
21 Ga0070686_100003361 3300005544 Bacteria 8766
22 Ga0070695_100005243 3300005545 Bacteria 7640
23 Ga0068859_100005310 3300005617 Bacteria 13100
24 Ga0068858_100008084 3300005842 Bacteria 10129
25 Ga0068860_100001862 3300005843 Bacteria 22410
26 Ga0068862_100002149 3300005844 Bacteria 17747
27 Ga0097620_100005310 3300006931 Bacteria 13100
28 Ga0105240_10000304 3300009093 Bacteria 95162
29 Ga0105240_10003762 3300009093 Bacteria 23453
30 Ga0111539_10006291 3300009094 Bacteria 15325
31 Ga0111539_10007724 3300009094 Bacteria 13736
32 Ga0105249_10007608 3300009553 Bacteria 9451
33 Ga0105239_10027937 3300010375 Bacteria 6207
34 Ga0157374_10000011 3300013296 Bacteria 466749
35 Ga0163162_10000120 3300013306 Bacteria 69255
36 Ga0157372_10002615 3300013307 Bacteria 19486
37 Ga0157375_10000862 3300013308 Bacteria 26373
38 Ga0163163_10000442 3300014325 Bacteria 37880
39 Ga0157380_10005131 3300014326 Bacteria 9153
40 Ga0207695_10000412 3300025913 Bacteria 95172
41 Ga0207695_10007172 3300025913 Bacteria 14260
42 Ga0207657_10000492 3300025919 Bacteria 41760
43 Ga0207681_10002276 3300025923 Bacteria 12198
44 Ga0207659_10000527 3300025926 Bacteria 22829
45 Ga0207659_10002813 3300025926 Bacteria 10376
46 Ga0207659_10027200 3300025926 Bacteria 3869
47 Ga0207664_10001846 3300025929 Bacteria 13969
48 Ga0207670_10002435 3300025936 Bacteria 9760
49 Ga0207691_10004237 3300025940 Bacteria 13931
50 Ga0207689_10005796 3300025942 Bacteria 10962
51 Ga0207661_10007122 3300025944 Bacteria 7948
52 Ga0207651_10001689 3300025960 Bacteria 10167
53 Ga0207703_10021606 3300026035 Bacteria 5039
54 Ga0207639_10008684 3300026041 Bacteria 6974
55 Ga0207428_10014867 3300027907 Bacteria 6742
56 Ga0268265_10002235 3300028380 Bacteria 14863
57 Ga0265318_10000321 3300028577 Bacteria 38312
58 Ga0265338_10004396 3300028800 Bacteria 19066
59 Ga0265338_10020917 3300028800 Bacteria 6850
60 Ga0265338_10038500 3300028800 Bacteria 4530
61 Ga0265332_10000186 3300031238 Bacteria 50885
62 Ga0265325_10000407 3300031241 Bacteria 30578
63 Ga0265340_10001920 3300031247 Bacteria 11878
64 Ga0265331_10006827 3300031250 Bacteria 6684
65 Ga0265327_10000061 3300031251 Bacteria 234364
66 Ga0265327_10005206 3300031251 Bacteria 10979
67 Ga0265316_10011505 3300031344 Bacteria 7972
68 Ga0265316_10018727 3300031344 Bacteria 5945
69 Ga0307513_10017784 3300031456 Bacteria 8515
70 Ga0265313_10000645 3300031595 Bacteria 35917
71 Ga0316576_10021850 3300031727 Bacteria 4433
72 Ga0316577_10000211 3300031733 Bacteria 19859
73 Ga0316583_10005279 3300032133 Bacteria 4633
74 Ga0316593_10000555 3300032168 Bacteria 6998
75 Ga0373955_0005845 3300035172 Bacteria 5558
76 Ga0373935_0002263 3300035692 Bacteria 10951
77 Ga0373947_0007566 3300035725 Bacteria 6284
78 Ga0373937_0009882 3300036401 Bacteria 8318
79 Ga0316582_0029390 3300036647 Bacteria 3339
80 Ga0395899_0000001 3300037312 Bacteria 1750322
81 Ga0400484_30728 3300038725 Bacteria 5905
82 Ga0400490_47652 3300038726 Bacteria 9034
83 Ga0400485_13852 3300038735 Bacteria 9014
84 Ga0400486_25969 3300038742 Bacteria 30144
85 Ga0400483_049102 3300039062 Bacteria 53483
86 Ga0400483_132075 3300039062 Bacteria 6285
87 Ga0400483_278560 3300039062 Bacteria 28505
88 Ga0400483_283687 3300039062 Bacteria 8023
89 Ga0400489_22837 3300039093 Bacteria 24767
90 Ga0451577_0000040 3300042876 Bacteria 346755
91 Ga0451577_0000344 3300042876 Bacteria 87186
92 Ga0451577_0002765 3300042876 Bacteria 20309
93 Ga0451577_0004339 3300042876 Bacteria 15036
94 Ga0451577_0012984 3300042876 Bacteria 7813
95 Ga0451577_0018952 3300042876 Bacteria 6335
96 Ga0451577_0051174 3300042876 Bacteria 3687
97 Ga0453683_0000371 3300044673 Bacteria 53836
98 Ga0453683_0011317 3300044673 Bacteria 5884
99 Ga0453683_0011930 3300044673 Bacteria 5712
100 Ga0453684_0000001 3300044712 Bacteria 2623166
101 Ga0453684_0000179 3300044712 Bacteria 280195
102 Ga0453684_0000204 3300044712 Bacteria 258105
103 Ga0453684_0000325 3300044712 Bacteria 200781
104 Ga0453684_0000395 3300044712 Bacteria 179647
105 Ga0453684_0002058 3300044712 Bacteria 51114
106 Ga0453684_0003358 3300044712 Bacteria 36239
107 Ga0453684_0019220 3300044712 Bacteria 10417
108 Ga0453684_0037573 3300044712 Bacteria 6645
109 Ga0451576_0009421 3300045051 Bacteria 11320
110 Ga0451576_0009802 3300045051 Bacteria 11070
111 Ga0451576_0029550 3300045051 Bacteria 5864
112 Ga0495603_0003732 3300046455 Bacteria 9061
113 Ga0495629_0000013 3300046459 Bacteria 212317
114 Ga0495580_0007141 3300046472 Bacteria 8995
115 Ga0495582_0003337 3300046473 Bacteria 9025
116 Ga0495639_0004393 3300046475 Bacteria 6042
117 Ga0495630_0008786 3300046517 Bacteria 7255
118 Ga0495622_0003023 3300046557 Bacteria 7976
119 Ga0495634_0012651 3300046642 Bacteria 6109
120 Ga0495658_0000092 3300046683 Bacteria 46249
121 Ga0495613_0000415 3300046689 Bacteria 36573
122 Ga0495613_0001834 3300046689 Bacteria 16157
123 Ga0495680_0000316 3300047322 Bacteria 54202
124 Ga0495684_0002262 3300047471 Bacteria 15430
125 Ga0496105_0013037 3300048908 Bacteria 6588
126 Ga0496109_0037851 3300048912 Bacteria 4360
127 Ga0501031_0000047 3300049568 Bacteria 66009
128 Ga0501031_0023426 3300049568 Bacteria 4025
129 Ga0501033_0029013 3300049570 Bacteria 4157
130 Ga0501039_0008134 3300049575 Bacteria 7990
131 Ga0501040_0016205 3300049576 Bacteria 4928
132 Ga0501072_0027322 3300049588 Bacteria 4453
133 Ga0501076_0020663 3300049592 Bacteria 5042
134 Ga0501081_0003568 3300049743 Bacteria 9946
135 Ga0501081_0022025 3300049743 Bacteria 4261
136 Ga0501083_0017589 3300049744 Bacteria 4984
137 Ga0501044_0036099 3300049823 Bacteria 5173
138 nmdc:mga08y16_10002_c1 3300050511 Bacteria 9953
139 nmdc:mga08y16_9002_c1 3300050511 Bacteria 10486
140 Ga0495601_0004696 3300053077 Bacteria 7915
141 Ga0495619_0002614 3300053085 Bacteria 11763
142 Ga0501084_0001499 3300054114 Bacteria 18526
143 Ga0501084_0010914 3300054114 Bacteria 7524
144 Ga0590071_000019 3300059421 Bacteria 42395
145 Ga0590075_000055 3300059424 Bacteria 28729
146 Ga0501082_0052639 3300060353 Bacteria 3509
147 2929299568 2929297113 Bacteria 3141306
148 2788433516 2786546940 Bacteria 6396474
149 Ga0065712_10068717
150 Ga0065707_10083097
151 Ga0065707_10089325
152 Ga0070683_100006112
153 Ga0070660_100001313
154 Ga0070689_100000138
155 Ga0070689_100001931
156 Ga0070689_100005604
157 Ga0070669_100002185
158 Ga0070669_100004648
159 Ga0070675_100000446
160 Ga0070675_100003581
161 Ga0070673_100003416
162 Ga0070688_100001362
163 Ga0070714_100015320
164 Ga0070714_100018614
165 Ga0070713_100000843
166 Ga0070694_100000256
167 Ga0068853_100001118
168 Ga0070672_100002578
169 Ga0070686_100003361
170 Ga0070695_100005243
171 Ga0068859_100005310
172 Ga0068858_100008084
173 Ga0068860_100001862
174 Ga0068862_100002149
175 Ga0097620_100005310
176 Ga0105240_10000304
177 Ga0105240_10003762
178 Ga0111539_10006291
179 Ga0111539_10007724
180 Ga0105249_10007608
181 Ga0105239_10027937
182 Ga0157374_10000011
183 Ga0163162_10000120
184 Ga0157372_10002615
185 Ga0157375_10000862
186 Ga0163163_10000442
187 Ga0157380_10005131
188 Ga0207695_10000412
189 Ga0207695_10007172
190 Ga0207657_10000492
191 Ga0207681_10002276
192 Ga0207659_10000527
193 Ga0207659_10002813
194 Ga0207659_10027200
195 Ga0207664_10001846
196 Ga0207670_10002435
197 Ga0207691_10004237
198 Ga0207689_10005796
199 Ga0207661_10007122
200 Ga0207651_10001689
201 Ga0207703_10021606
202 Ga0207639_10008684
203 Ga0207428_10014867
204 Ga0268265_10002235
205 Ga0265318_10000321
206 Ga0265338_10004396
207 Ga0265338_10020917
208 Ga0265338_10038500
209 Ga0265332_10000186
210 Ga0265325_10000407
211 Ga0265340_10001920
212 Ga0265331_10006827
213 Ga0265327_10000061
214 Ga0265327_10005206
215 Ga0265316_10011505
216 Ga0265316_10018727
217 Ga0307513_10017784
218 Ga0265313_10000645
219 Ga0316576_10021850
220 Ga0316577_10000211
221 Ga0316583_10005279
222 Ga0316593_10000555
223 Ga0373955_0005845
224 Ga0373935_0002263
225 Ga0373947_0007566
226 Ga0373937_0009882
227 Ga0316582_0029390
228 Ga0395899_0000001
229 Ga0400484_30728
230 Ga0400490_47652
231 Ga0400485_13852
232 Ga0400486_25969
233 Ga0400483_049102
234 Ga0400483_132075
235 Ga0400483_278560
236 Ga0400483_283687
237 Ga0400489_22837
238 Ga0451577_0000040
239 Ga0451577_0000344
240 Ga0451577_0002765
241 Ga0451577_0004339
242 Ga0451577_0012984
243 Ga0451577_0018952
244 Ga0451577_0051174
245 Ga0453683_0000371
246 Ga0453683_0011317
247 Ga0453683_0011930
248 Ga0453684_0000001
249 Ga0453684_0000179
250 Ga0453684_0000204
251 Ga0453684_0000325
252 Ga0453684_0000395
253 Ga0453684_0002058
254 Ga0453684_0003358
255 Ga0453684_0019220
256 Ga0453684_0037573
257 Ga0451576_0009421
258 Ga0451576_0009802
259 Ga0451576_0029550
260 Ga0495603_0003732
261 Ga0495629_0000013
262 Ga0495580_0007141
263 Ga0495582_0003337
264 Ga0495639_0004393
265 Ga0495630_0008786
266 Ga0495622_0003023
267 Ga0495634_0012651
268 Ga0495658_0000092
269 Ga0495613_0000415
270 Ga0495613_0001834
271 Ga0495680_0000316
272 Ga0495684_0002262
273 Ga0496105_0013037
274 Ga0496109_0037851
275 Ga0501031_0000047
276 Ga0501031_0023426
277 Ga0501033_0029013
278 Ga0501039_0008134
279 Ga0501040_0016205
280 Ga0501072_0027322
281 Ga0501076_0020663
282 Ga0501081_0003568
283 Ga0501081_0022025
284 Ga0501083_0017589
285 Ga0501044_0036099
286 nmdc:mga08y16_10002_c1
287 nmdc:mga08y16_9002_c1
288 Ga0495601_0004696
289 Ga0495619_0002614
290 Ga0501084_0001499
291 Ga0501084_0010914
292 Ga0590071_000019
293 Ga0590075_000055
294 Ga0501082_0052639
295 2929299568
296 2788433516

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

69

601

0.94

PF00873

ACR_tran

AcrB/AcrD/AcrF family

628

1186

0.83

PF02355

SecD_SecF

Protein export membrane protein

370

565

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wls-assembly1.cif.gz_C crystal structure of the multidrug efflux transporter bpeb from burkholderia pseudomallei 0.8605 10 986
6zof-assembly1.cif.gz_C fusidic acid binding to the tm7/tm8 groove of acrb-f380a t protomer 0.8591 11 984
7rr8-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.857 11 986
4u95-assembly1.cif.gz_C coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump acrb 0.8568 12 985
6zo5-assembly1.cif.gz_C fusidic acid binding to the tm1/tm2 groove of acrb-g619p_g621p 0.8566 6 985
ID Description Score Start End Superfamily
af_Q2FVZ5_891_1052_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9588 840 988 1.20.1640.10
3w9iD05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9471 833 985 1.20.1640.10
3w9iC05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9429 830 984 1.20.1640.10
3d9bA05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9402 836 985 1.20.1640.10
af_P24181_868_1032_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9294 830 985 1.20.1640.10
ID Description Score Start End GO Terms
AF-A0A7Y2VBP3-F1-model_v4 Efflux RND transporter permease subunit 0.9676 750 986 GO:0005886
GO:0042910
AF-A0A1G0LUZ6-F1-model_v4 Multidrug transporter AcrB 0.9557 1 992 GO:0005886
GO:0042910
AF-A0A6P1DRH5-F1-model_v4 Efflux RND transporter permease subunit 0.9521 1 982 GO:0005886
GO:0042910
AF-A0A1G0LUZ6-F1-model_v4 Multidrug transporter AcrB 0.9492 1 992 GO:0005886
GO:0042910
AF-A0A543KTB1-F1-model_v4 AcrB/AcrD/AcrF family protein 0.9446 840 987 GO:0005886
GO:0042910

Map