F204221

General Info

Members Datasets Scaffolds Average Seq Length
148 102 148 290

Family's Representative Sequence

Representative Sequence 3300048904|Ga0496101_0064670|Ga0496101_0064670_67_1086
Length 339
Sequence LTIVVSRIDMIAPTITTIAIGLTSSGSDEPGRLRAIRQVCPTPLSDKLRGPMGAPTFDLQSHSTRSDGGLEPADVVRLAAEAGVQTLALSDHDTVDGVSVAIAAGERHGIRVVPSTELSSIDGEREDMHILGYLVDHSDPALLAALERFRADREARAVRMMDALRELGFELDTAAIDARAAAGAPIGRPHIARAAFDHPANATRIADEGLEDFSALLVAYLIDGAPAFRRRTTPTIAEAIEVIHAAGGVAVWAHPYWDLDADADVLDAIERYVAMGIDGVEAFYVTHTEEQTRVAYDECTRRGLLTTGSADFHAPDHRLFSRFRAFELFGLEPNLGPMA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
22 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
23 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
53 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
60 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
61 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
62 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
63 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
64 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
65 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
66 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
67 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
68 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
69 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
70 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
75 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
76 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
77 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
96 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
97 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
98 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
99 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.35
Nodule 0
Rhizoplane 22.97
Rhizosphere 75.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100415133 3300005329 Bacteria 1284
2 Ga0068868_100179550 3300005338 Bacteria 1756
3 Ga0070714_100623169 3300005435 Bacteria 1037
4 Ga0070710_10145649 3300005437 Unclassified 1456
5 Ga0070711_100005924 3300005439 Bacteria 7339
6 Ga0070711_100154085 3300005439 Unclassified 1736
7 Ga0070700_100091484 3300005441 Bacteria 1986
8 Ga0070684_100389575 3300005535 Bacteria 1284
9 Ga0070684_100419918 3300005535 Bacteria 1234
10 Ga0070665_100038633 3300005548 Bacteria 4798
11 Ga0070664_100247207 3300005564 Bacteria 1602
12 Ga0068856_100051140 3300005614 Bacteria 4075
13 Ga0068856_100065462 3300005614 Bacteria 3592
14 Ga0068861_100290234 3300005719 Bacteria 1412
15 Ga0081455_10008788 3300005937 Bacteria 10454
16 Ga0081538_10010146 3300005981 Bacteria 7746
17 Ga0081540_1006074 3300005983 Bacteria 8878
18 Ga0081539_10051224 3300005985 Bacteria 2329
19 Ga0075431_100209530 3300006847 Bacteria 1992
20 Ga0105240_10023575 3300009093 Bacteria 8133
21 Ga0111539_10060000 3300009094 Bacteria 4509
22 Ga0111539_10302477 3300009094 Bacteria 1861
23 Ga0111539_10695230 3300009094 Bacteria 1184
24 Ga0111539_10917810 3300009094 Bacteria 1018
25 Ga0105249_10781596 3300009553 Bacteria 1018
26 Ga0105239_10732962 3300010375 Bacteria 1131
27 Ga0105246_10230500 3300011119 Bacteria 1458
28 Ga0163163_10272266 3300014325 Bacteria 1744
29 Ga0163163_10608916 3300014325 Bacteria 1155
30 Ga0207692_10229802 3300025898 Unclassified 1103
31 Ga0207688_10137957 3300025901 Bacteria 1434
32 Ga0207643_10110703 3300025908 Bacteria 1618
33 Ga0207643_10183343 3300025908 Bacteria 1268
34 Ga0207705_10197185 3300025909 Bacteria 1525
35 Ga0207695_10059097 3300025913 Bacteria 3978
36 Ga0207663_10003890 3300025916 Bacteria 7378
37 Ga0207644_10451741 3300025931 Bacteria 1056
38 Ga0207706_10181156 3300025933 Bacteria 1850
39 Ga0207709_10135348 3300025935 Bacteria 1686
40 Ga0207665_10015686 3300025939 Bacteria 4973
41 Ga0207711_10399766 3300025941 Bacteria 1276
42 Ga0207661_10088105 3300025944 Bacteria 2580
43 Ga0207661_10208607 3300025944 Bacteria 1721
44 Ga0207661_10496789 3300025944 Bacteria 1115
45 Ga0207640_10230215 3300025981 Bacteria 1425
46 Ga0207677_10198987 3300026023 Bacteria 1591
47 Ga0207678_10144435 3300026067 Bacteria 2031
48 Ga0207678_10184804 3300026067 Bacteria 1780
49 Ga0207708_10004324 3300026075 Bacteria 10461
50 Ga0207708_10172634 3300026075 Bacteria 1713
51 Ga0207702_10062655 3300026078 Bacteria 3177
52 Ga0207648_10090681 3300026089 Bacteria 2671
53 Ga0207648_10526014 3300026089 Bacteria 1084
54 Ga0207675_100553451 3300026118 Bacteria 1150
55 Ga0207698_10696435 3300026142 Bacteria 1011
56 Ga0207428_10031370 3300027907 Bacteria 4385
57 Ga0307408_100078605 3300031548 Bacteria 2460
58 Ga0307405_10166646 3300031731 Unclassified 1567
59 Ga0307405_10250427 3300031731 Bacteria 1318
60 Ga0307413_10040213 3300031824 Bacteria 2727
61 Ga0307406_10172870 3300031901 Bacteria 1565
62 Ga0307407_10028295 3300031903 Bacteria 2995
63 Ga0307407_10143661 3300031903 Bacteria 1543
64 Ga0307409_100014178 3300031995 Bacteria 5169
65 Ga0307409_100048267 3300031995 Bacteria 3238
66 Ga0307416_100010431 3300032002 Bacteria 6135
67 Ga0307416_100028061 3300032002 Bacteria 4180
68 Ga0307416_100089670 3300032002 Bacteria 2634
69 Ga0307416_100183071 3300032002 Bacteria 1966
70 Ga0307416_100328072 3300032002 Bacteria 1536
71 Ga0307414_10416123 3300032004 Bacteria 1171
72 Ga0307411_10308100 3300032005 Bacteria 1273
73 Ga0307411_10444727 3300032005 Bacteria 1083
74 Ga0307415_100000399 3300032126 Bacteria 18493
75 Ga0307415_100035569 3300032126 Bacteria 3254
76 Ga0395898_0284546 3300037466 Bacteria 1577
77 Ga0395905_0220073 3300037471 Bacteria 1777
78 Ga0395905_0252027 3300037471 Bacteria 1649
79 Ga0395901_0010204 3300038443 Bacteria 9516
80 Ga0466968_0025625 3300044735 Bacteria 2416
81 Ga0466967_0043070 3300045976 Bacteria 3907
82 Ga0466967_0181094 3300045976 Bacteria 1988
83 Ga0495664_0000057 3300046477 Bacteria 54675
84 Ga0495630_0000269 3300046517 Bacteria 42207
85 Ga0495652_0028457 3300046529 Bacteria 4917
86 Ga0495657_0000202 3300046675 Bacteria 53160
87 Ga0495600_0121398 3300046809 Bacteria 1699
88 Ga0495604_0000173 3300047317 Bacteria 57021
89 Ga0495684_0073133 3300047471 Bacteria 2604
90 Ga0496100_0017281 3300048903 Bacteria 4255
91 Ga0496101_0064670 3300048904 Bacteria 2665
92 Ga0496101_0110095 3300048904 Bacteria 2072
93 Ga0496102_0000019 3300048905 Bacteria 264583
94 Ga0496103_0000702 3300048906 Bacteria 24784
95 Ga0496103_0030833 3300048906 Bacteria 3264
96 Ga0496104_0000033 3300048907 Bacteria 189758
97 Ga0496104_0030445 3300048907 Bacteria 5015
98 Ga0496104_0105657 3300048907 Bacteria 2698
99 Ga0496106_0000915 3300048909 Bacteria 21452
100 Ga0496106_0025901 3300048909 Bacteria 4364
101 Ga0496107_0001559 3300048910 Bacteria 14241
102 Ga0496107_0020145 3300048910 Bacteria 4710
103 Ga0496107_0036587 3300048910 Bacteria 3521
104 Ga0496107_0415095 3300048910 Bacteria 1001
105 Ga0496108_0006316 3300048911 Bacteria 9602
106 Ga0496108_0229018 3300048911 Bacteria 1616
107 Ga0496109_0237611 3300048912 Bacteria 1714
108 Ga0496110_0000337 3300048913 Bacteria 31283
109 Ga0496110_0000553 3300048913 Bacteria 25547
110 Ga0496110_0081690 3300048913 Bacteria 2881
111 Ga0496110_0369447 3300048913 Bacteria 1307
112 Ga0496111_0000068 3300048914 Bacteria 42400
113 Ga0496111_0004008 3300048914 Bacteria 9245
114 Ga0496111_0039555 3300048914 Bacteria 3381
115 Ga0496112_0002374 3300048915 Bacteria 15130
116 Ga0496112_0167752 3300048915 Bacteria 2161
117 Ga0496112_0193290 3300048915 Bacteria 1996
118 Ga0496113_0013703 3300048916 Bacteria 5505
119 Ga0496113_0070538 3300048916 Bacteria 2656
120 Ga0496113_0543586 3300048916 Unclassified 932
121 Ga0496115_0032745 3300048918 Bacteria 4102
122 Ga0496115_0392242 3300048918 Unclassified 1127
123 Ga0496115_0594139 3300048918 Bacteria 881
124 Ga0501031_0182364 3300049568 Bacteria 1371
125 Ga0501032_0042360 3300049569 Bacteria 3088
126 Ga0501034_0165308 3300049571 Bacteria 2181
127 Ga0501036_0097910 3300049572 Bacteria 2479
128 Ga0501037_0046592 3300049573 Bacteria 3179
129 Ga0501039_0110881 3300049575 Bacteria 2145
130 Ga0501043_0050715 3300049579 Bacteria 3261
131 Ga0501046_0039174 3300049580 Bacteria 3797
132 Ga0501070_0032000 3300049586 Bacteria 4404
133 Ga0501074_0102926 3300049590 Bacteria 2044
134 Ga0501079_0087979 3300049741 Bacteria 2405
135 Ga0501079_0109445 3300049741 Bacteria 2146
136 Ga0501081_0181749 3300049743 Bacteria 1521
137 Ga0501045_0046706 3300049824 Bacteria 3153
138 Ga0501045_0201491 3300049824 Bacteria 1483
139 nmdc:mga09592_214966_c1 3300050508 Bacteria 1666
140 nmdc:mga08y16_45376_c1 3300050511 Bacteria 4605
141 Ga0495601_0010328 3300053077 Bacteria 5554
142 Ga0495655_0036640 3300053083 Bacteria 1228
143 Ga0495619_0344115 3300053085 Bacteria 1032
144 Ga0500556_0000325 3300053104 Bacteria 35863
145 Ga0500616_0001540 3300053153 Bacteria 21680
146 Ga0501084_0092278 3300054114 Bacteria 2542
147 Ga0501082_0140388 3300060353 Bacteria 2097
148 Ga0466962_0067785 3300061719 Bacteria 1704

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048916 Ga0496113_0543586 Ga0496113_0543586_140_916 230
2 3300048912 Ga0496109_0237611 Ga0496109_0237611_297_1076 231
3 3300048913 Ga0496110_0081690 Ga0496110_0081690_538_1317 231
4 3300048914 Ga0496111_0039555 Ga0496111_0039555_326_1105 231
5 3300048915 Ga0496112_0167752 Ga0496112_0167752_1370_2149 231
6 3300048918 Ga0496115_0594139 Ga0496115_0594139_36_815 231
7 3300048910 Ga0496107_0415095 Ga0496107_0415095_145_939 236
8 3300049568 Ga0501031_0182364 Ga0501031_0182364_236_1102 247
9 3300049575 Ga0501039_0110881 Ga0501039_0110881_1046_1912 247
10 3300049741 Ga0501079_0087979 Ga0501079_0087979_737_1603 247
11 3300049824 Ga0501045_0046706 Ga0501045_0046706_1446_2312 247
12 3300060353 Ga0501082_0140388 Ga0501082_0140388_573_1439 247
13 3300032002 Ga0307416_100089670 Ga0307416_1000896703 248
14 3300005983 Ga0081540_1006074 Ga0081540_10060745 249
15 3300006847 Ga0075431_100209530 Ga0075431_1002095303 250
16 3300009093 Ga0105240_10023575 Ga0105240_100235756 253
17 3300025913 Ga0207695_10059097 Ga0207695_100590973 253
18 3300053085 Ga0495619_0344115 Ga0495619_0344115_70_1002 253
19 3300005548 Ga0070665_100038633 Ga0070665_1000386334 254
20 3300005614 Ga0068856_100065462 Ga0068856_1000654623 254
21 3300005937 Ga0081455_10008788 Ga0081455_100087882 254
22 3300009094 Ga0111539_10917810 Ga0111539_109178101 254
23 3300010375 Ga0105239_10732962 Ga0105239_107329622 254
24 3300025944 Ga0207661_10088105 Ga0207661_100881053 254
25 3300025944 Ga0207661_10496789 Ga0207661_104967891 254
26 3300026089 Ga0207648_10526014 Ga0207648_105260142 254
27 3300045976 Ga0466967_0043070 Ga0466967_0043070_2521_3384 254
28 3300048903 Ga0496100_0017281 Ga0496100_0017281_1678_2526 254
29 3300048904 Ga0496101_0110095 Ga0496101_0110095_718_1566 254
30 3300048906 Ga0496103_0030833 Ga0496103_0030833_210_1058 254
31 3300048907 Ga0496104_0030445 Ga0496104_0030445_493_1341 254
32 3300048909 Ga0496106_0000915 Ga0496106_0000915_15098_15946 254
33 3300048909 Ga0496106_0025901 Ga0496106_0025901_569_1417 254
34 3300048910 Ga0496107_0001559 Ga0496107_0001559_7768_8616 254
35 3300048910 Ga0496107_0036587 Ga0496107_0036587_1538_2386 254
36 3300048911 Ga0496108_0006316 Ga0496108_0006316_2294_3142 254
37 3300048913 Ga0496110_0000553 Ga0496110_0000553_6364_7212 254
38 3300048914 Ga0496111_0004008 Ga0496111_0004008_2501_3349 254
39 3300048915 Ga0496112_0193290 Ga0496112_0193290_287_1135 254
40 3300048916 Ga0496113_0013703 Ga0496113_0013703_4542_5390 254
41 3300048918 Ga0496115_0032745 Ga0496115_0032745_608_1456 254
42 3300048918 Ga0496115_0392242 Ga0496115_0392242_36_884 254
43 3300005439 Ga0070711_100005924 Ga0070711_1000059246 255
44 3300014325 Ga0163163_10608916 Ga0163163_106089162 255
45 3300025901 Ga0207688_10137957 Ga0207688_101379572 255
46 3300025908 Ga0207643_10110703 Ga0207643_101107032 255
47 3300025916 Ga0207663_10003890 Ga0207663_100038906 255
48 3300025931 Ga0207644_10451741 Ga0207644_104517411 255
49 3300025941 Ga0207711_10399766 Ga0207711_103997661 255
50 3300037466 Ga0395898_0284546 Ga0395898_0284546_507_1373 255
51 3300037471 Ga0395905_0220073 Ga0395905_0220073_230_1096 255
52 3300037471 Ga0395905_0252027 Ga0395905_0252027_605_1471 255
53 3300038443 Ga0395901_0010204 Ga0395901_0010204_7811_8677 255
54 3300046517 Ga0495630_0000269 Ga0495630_0000269_7098_7988 255
55 3300046675 Ga0495657_0000202 Ga0495657_0000202_34248_35138 255
56 3300047471 Ga0495684_0073133 Ga0495684_0073133_1178_2068 255
57 3300048907 Ga0496104_0105657 Ga0496104_0105657_1236_2102 255
58 3300048913 Ga0496110_0369447 Ga0496110_0369447_27_893 255
59 3300054114 Ga0501084_0092278 Ga0501084_0092278_101_967 255
60 3300014325 Ga0163163_10272266 Ga0163163_102722662 256
61 3300031731 Ga0307405_10250427 Ga0307405_102504272 256
62 3300031995 Ga0307409_100048267 Ga0307409_1000482671 256
63 3300032002 Ga0307416_100010431 Ga0307416_1000104313 256
64 3300032004 Ga0307414_10416123 Ga0307414_104161232 256
65 3300032005 Ga0307411_10308100 Ga0307411_103081002 256
66 3300048904 Ga0496101_0064670 Ga0496101_0064670_67_1086 256
67 3300048910 Ga0496107_0020145 Ga0496107_0020145_1855_2874 256
68 3300048911 Ga0496108_0229018 Ga0496108_0229018_246_1238 256
69 3300048915 Ga0496112_0002374 Ga0496112_0002374_2199_3218 256
70 3300048916 Ga0496113_0070538 Ga0496113_0070538_836_1855 256
71 3300049743 Ga0501081_0181749 Ga0501081_0181749_605_1477 256
72 3300005435 Ga0070714_100623169 Ga0070714_1006231691 257
73 3300005719 Ga0068861_100290234 Ga0068861_1002902342 257
74 3300005981 Ga0081538_10010146 Ga0081538_100101465 257
75 3300005985 Ga0081539_10051224 Ga0081539_100512242 257
76 3300009094 Ga0111539_10060000 Ga0111539_100600005 257
77 3300009094 Ga0111539_10695230 Ga0111539_106952301 257
78 3300025933 Ga0207706_10181156 Ga0207706_101811562 257
79 3300025935 Ga0207709_10135348 Ga0207709_101353482 257
80 3300026067 Ga0207678_10144435 Ga0207678_101444351 257
81 3300026075 Ga0207708_10172634 Ga0207708_101726341 257
82 3300026089 Ga0207648_10090681 Ga0207648_100906813 257
83 3300026118 Ga0207675_100553451 Ga0207675_1005534512 257
84 3300027907 Ga0207428_10031370 Ga0207428_100313703 257
85 3300031548 Ga0307408_100078605 Ga0307408_1000786053 257
86 3300031824 Ga0307413_10040213 Ga0307413_100402134 257
87 3300031901 Ga0307406_10172870 Ga0307406_101728703 257
88 3300031903 Ga0307407_10028295 Ga0307407_100282954 257
89 3300031903 Ga0307407_10143661 Ga0307407_101436612 257
90 3300031995 Ga0307409_100014178 Ga0307409_1000141783 257
91 3300032002 Ga0307416_100183071 Ga0307416_1001830712 257
92 3300032002 Ga0307416_100328072 Ga0307416_1003280722 257
93 3300032126 Ga0307415_100035569 Ga0307415_1000355692 257
94 3300049824 Ga0501045_0201491 Ga0501045_0201491_278_1150 257
95 3300050508 nmdc:mga09592_214966_c1 nmdc:mga09592_214966_c1_201_1073 257
96 3300050511 nmdc:mga08y16_45376_c1 nmdc:mga08y16_45376_c1_3538_4410 257
97 3300061719 Ga0466962_0067785 Ga0466962_0067785_131_1015 257
98 3300005338 Ga0068868_100179550 Ga0068868_1001795502 258
99 3300005441 Ga0070700_100091484 Ga0070700_1000914842 258
100 3300009094 Ga0111539_10302477 Ga0111539_103024773 258
101 3300009553 Ga0105249_10781596 Ga0105249_107815961 258
102 3300025908 Ga0207643_10183343 Ga0207643_101833432 258
103 3300025909 Ga0207705_10197185 Ga0207705_101971851 258
104 3300025981 Ga0207640_10230215 Ga0207640_102302153 258
105 3300026023 Ga0207677_10198987 Ga0207677_101989872 258
106 3300026075 Ga0207708_10004324 Ga0207708_100043248 258
107 3300031731 Ga0307405_10166646 Ga0307405_101666463 258
108 3300044735 Ga0466968_0025625 Ga0466968_0025625_305_1180 258
109 3300045976 Ga0466967_0181094 Ga0466967_0181094_675_1550 258
110 3300046477 Ga0495664_0000057 Ga0495664_0000057_355_1260 258
111 3300046529 Ga0495652_0028457 Ga0495652_0028457_2862_3767 258
112 3300048905 Ga0496102_0000019 Ga0496102_0000019_112320_113225 258
113 3300048906 Ga0496103_0000702 Ga0496103_0000702_11721_12626 258
114 3300053077 Ga0495601_0010328 Ga0495601_0010328_393_1340 258
115 3300005437 Ga0070710_10145649 Ga0070710_101456492 259
116 3300005439 Ga0070711_100154085 Ga0070711_1001540852 259
117 3300005535 Ga0070684_100389575 Ga0070684_1003895751 259
118 3300011119 Ga0105246_10230500 Ga0105246_102305002 259
119 3300025898 Ga0207692_10229802 Ga0207692_102298021 259
120 3300025939 Ga0207665_10015686 Ga0207665_100156862 259
121 3300025944 Ga0207661_10208607 Ga0207661_102086071 259
122 3300026142 Ga0207698_10696435 Ga0207698_106964352 259
123 3300032005 Ga0307411_10444727 Ga0307411_104447272 259
124 3300049569 Ga0501032_0042360 Ga0501032_0042360_39_917 259
125 3300049571 Ga0501034_0165308 Ga0501034_0165308_704_1582 259
126 3300049572 Ga0501036_0097910 Ga0501036_0097910_1581_2459 259
127 3300049573 Ga0501037_0046592 Ga0501037_0046592_2243_3121 259
128 3300049579 Ga0501043_0050715 Ga0501043_0050715_1548_2426 259
129 3300049580 Ga0501046_0039174 Ga0501046_0039174_2172_3050 259
130 3300049586 Ga0501070_0032000 Ga0501070_0032000_2405_3283 259
131 3300049590 Ga0501074_0102926 Ga0501074_0102926_416_1294 259
132 3300049741 Ga0501079_0109445 Ga0501079_0109445_482_1360 259
133 3300053104 Ga0500556_0000325 Ga0500556_0000325_4653_5543 259
134 3300053153 Ga0500616_0001540 Ga0500616_0001540_15651_16541 259
135 3300005614 Ga0068856_100051140 Ga0068856_1000511403 260
136 3300026078 Ga0207702_10062655 Ga0207702_100626552 260
137 3300047317 Ga0495604_0000173 Ga0495604_0000173_48776_49711 260
138 3300048907 Ga0496104_0000033 Ga0496104_0000033_80027_80944 260
139 3300048913 Ga0496110_0000337 Ga0496110_0000337_10703_11620 260
140 3300048914 Ga0496111_0000068 Ga0496111_0000068_34298_35215 260
141 3300053083 Ga0495655_0036640 Ga0495655_0036640_139_1011 260
142 3300046809 Ga0495600_0121398 Ga0495600_0121398_310_1224 261
143 3300005329 Ga0070683_100415133 Ga0070683_1004151332 262
144 3300005535 Ga0070684_100419918 Ga0070684_1004199182 262
145 3300005564 Ga0070664_100247207 Ga0070664_1002472072 262
146 3300026067 Ga0207678_10184804 Ga0207678_101848042 262
147 3300032002 Ga0307416_100028061 Ga0307416_1000280613 262
148 3300032126 Ga0307415_100000399 Ga0307415_10000039910 262

Structural Annotation

Top 5 Hits

ID Description Score Start End
7qvi-assembly1.cif.gz_H fiber-forming rubisco derived from ancestral sequence reconstruction and rational engineering 0.8266 178 223
7qsy-assembly1.cif.gz_C-2 non-obligately l8s8-complex forming rubisco derived from ancestral sequence reconstruction and rational engineering in l8s8 complex 0.8215 178 225
3hb9-assembly1.cif.gz_B crystal structure of s. aureus pyruvate carboxylase a610t mutant 0.82 179 223
3hb9-assembly1.cif.gz_D crystal structure of s. aureus pyruvate carboxylase a610t mutant 0.8189 179 223
7qt1-assembly1.cif.gz_C non-obligately l8s8-complex forming rubisco derived from ancestral sequence reconstruction and rational engineering in l8s8 complex with substitution e170n 0.8169 178 223
ID Description Score Start End Superfamily
af_Q58628_1_453_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8134 179 225 3.20.20.70
4hnvD04 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8134 179 225 3.20.20.70
af_O76922_484_615_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7581 175 225 3.40.50.2300
af_Q9VKM1_470_593_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.7567 178 225 3.40.50.2300
3rk0A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7466 176 225 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7V8Y3W8-F1-model_v4 PHP domain-containing protein 0.9892 161 253 GO:0004534
GO:0035312
AF-A0A537W4B7-F1-model_v4 Phosphatase 0.9807 183 257
AF-A0A537W4B7-F1-model_v4 Phosphatase 0.9319 183 257
AF-A0A1Q3NHG6-F1-model_v4 deleted 0.9214 180 251
AF-A0A7V8Y3W8-F1-model_v4 PHP domain-containing protein 0.9206 161 253 GO:0004534
GO:0035312

Feature Viewer

pLDDT pTM Quality
90.98 0.83 High
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Predicted Structure (AlphaFold2)

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