F202530

General Info

Members Datasets Scaffolds Average Seq Length
148 102 297 518

Family's Representative Sequence

Representative Sequence 3300005455|Ga0070663_100028933|Ga0070663_1000289333
Length 598
Sequence VERGPPAPDGHSDTRSPPLPHTHAAQPGWKSWSQAKSACTWTPARTRGGSIAAPKPFPQFVELTLGLEEPQDRTAISRHLARKLGVAPADVPGLVLRKRSLDCRHGRIRQQLSLEILADPAARDLSFGLVPGAELGAPQPIEVSSPARVLVIGDGPCGLFCAYELARAGIGSIVLDRGKPVQPRRRDLKGLTRHGSVDPDSNYCFGEGGAGTYSDGKLYTRSHKRGPVRDVLEILALHGAPSEILIDARPHIGTNKLPDVVSALRQRLENVGVQFRFGARVVELLRSGSPARVTGVRLADGSELEARAIVLATGHSARDVYRSLHEAGHRLEAKSFAIGVRIEHPQPLINRIQYGALAEHPQLPSAAYQLVDSRDGCSVFSFCMCPGGFIVPATTEPEHVVVNGMSPSSRNSRYANSGLVVAVDVEQLPAHGFAAPLGGLELQSAIERAAFAAGGGALKAPATRVTDFLAQRSSSSLPSSSYVPGLAASDVAAVLDGAGPRLAAPLRTALAQFGRQLRGYITEEAVLVGVESRTSSPVRIPRDPVSLESLDWAGLYPAGEGAGYAGGIVSAAVDGMRIARQIAAQLGAPARVSELKRS

Samples

Sample ID Description Type Environment
1 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
7 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
13 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
14 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
15 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
16 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
17 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
18 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
19 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
20 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
21 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
22 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
33 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
36 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
37 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
45 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
46 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
47 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
51 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
52 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
53 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
54 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
61 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
62 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
65 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
66 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
67 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
68 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
69 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
70 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
71 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
72 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
76 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
77 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
80 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
81 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
82 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
83 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
84 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
85 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
87 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
88 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
89 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
90 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
91 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
92 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
93 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
94 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
98 2818991444 Filimonas endophytica 3197 Isolate Unclassified
99 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
100 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
101 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
102 2958512119 Flavobacterium sp. Sd200 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.95
Metatranscriptomes 0
Isolates 4.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.41
Nodule 0
Rhizoplane 1.35
Rhizosphere 81.76
Stem 0
Stem Tuber 0
Unclassified 1.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070663_100028933 3300005455 Bacteria 3779
2 rootH1_10029960 3300003316 Bacteria 2876
3 rootH1_10029960 3300003323 Bacteria 9451
4 Ga0070682_100001450 3300005337 Bacteria 13351
5 Ga0070682_100002367 3300005337 Bacteria 10445
6 Ga0070678_100003772 3300005456 Bacteria 8493
7 Ga0070698_100002276 3300005471 Bacteria 21258
8 Ga0068853_100002106 3300005539 Bacteria 14771
9 Ga0070672_100002202 3300005543 Bacteria 12290
10 Ga0070665_100040561 3300005548 Bacteria 4679
11 Ga0068855_100000020 3300005563 Bacteria 205600
12 Ga0068855_100003964 3300005563 Bacteria 18071
13 Ga0068856_100027128 3300005614 Bacteria 5588
14 Ga0068863_100040276 3300005841 Bacteria 4443
15 Ga0068863_100172666 3300005841 Unclassified 2074
16 Ga0070717_10039696 3300006028 Bacteria 3830
17 Ga0075436_100017075 3300006914 Bacteria 4968
18 Ga0075436_100136364 3300006914 Bacteria 1723
19 Ga0105245_10000065 3300009098 Bacteria 109701
20 Ga0105249_10192445 3300009553 Bacteria 1991
21 Ga0157370_10003290 3300013104 Bacteria 19059
22 Ga0157374_10042082 3300013296 Bacteria 4213
23 Ga0163163_10011296 3300014325 Bacteria 8094
24 Ga0157380_10000046 3300014326 Bacteria 73022
25 Ga0157380_10000344 3300014326 Bacteria 27884
26 Ga0163161_10030086 3300017792 Bacteria 3862
27 Ga0213875_10000436 3300021388 Bacteria 36576
28 Ga0207662_10077294 3300025918 Bacteria 2025
29 Ga0207687_10001150 3300025927 Bacteria 18019
30 Ga0207691_10005389 3300025940 Bacteria 12352
31 Ga0207667_10000284 3300025949 Bacteria 69687
32 Ga0207667_10014413 3300025949 Bacteria 9017
33 Ga0207712_10126981 3300025961 Bacteria 1938
34 Ga0207678_10045127 3300026067 Bacteria 3811
35 Ga0207676_10140881 3300026095 Bacteria 2064
36 Ga0207675_100026950 3300026118 Bacteria 5350
37 Ga0207675_100056216 3300026118 Bacteria 3670
38 Ga0207683_10001082 3300026121 Bacteria 24824
39 Ga0268266_10002404 3300028379 Bacteria 20173
40 Ga0265334_10008479 3300028573 Bacteria 4369
41 Ga0307517_10043999 3300028786 Bacteria 4736
42 Ga0265338_10003327 3300028800 Bacteria 22730
43 Ga0265338_10005427 3300028800 Bacteria 16641
44 Ga0265332_10007532 3300031238 Bacteria 4921
45 Ga0265332_10007582 3300031238 Bacteria 4903
46 Ga0265340_10001931 3300031247 Bacteria 11848
47 Ga0265339_10000108 3300031249 Bacteria 67701
48 Ga0265327_10008737 3300031251 Bacteria 7488
49 Ga0265316_10001494 3300031344 Bacteria 25074
50 Ga0307513_10003687 3300031456 Bacteria 20718
51 Ga0307509_10002402 3300031507 Bacteria 30348
52 Ga0307509_10008526 3300031507 Bacteria 13047
53 Ga0307509_10111318 3300031507 Bacteria 2741
54 Ga0307408_100027768 3300031548 Bacteria 3904
55 Ga0307508_10003016 3300031616 Bacteria 17354
56 Ga0265314_10000001 3300031711 Bacteria 3792860
57 Ga0265314_10052663 3300031711 Bacteria 2828
58 Ga0316576_10016136 3300031727 Bacteria 5036
59 Ga0307516_10007331 3300031730 Bacteria 12694
60 Ga0307516_10066082 3300031730 Bacteria 3490
61 Ga0307405_10010073 3300031731 Bacteria 4878
62 Ga0307405_10024695 3300031731 Bacteria 3438
63 Ga0307406_10115261 3300031901 Bacteria 1857
64 Ga0307409_100133056 3300031995 Bacteria 2129
65 Ga0307411_10093212 3300032005 Bacteria 2108
66 Ga0373926_0008776 3300035083 Bacteria 3365
67 Ga0373936_0000079 3300035113 Bacteria 36342
68 Ga0373941_0016576 3300035115 Bacteria 2006
69 Ga0373961_0000720 3300035241 Bacteria 11511
70 Ga0373947_0009620 3300035725 Bacteria 5548
71 Ga0316584_0012408 3300036712 Bacteria 6009
72 Ga0395899_0011652 3300037312 Bacteria 6729
73 Ga0395905_0191372 3300037471 Bacteria 1919
74 Ga0436364_1554662 3300037853 Bacteria 36619
75 Ga0436365_1584543 3300039437 Bacteria 38465
76 Ga0451807_0048198 3300041486 Bacteria 7452
77 Ga0451807_0635450 3300041486 Bacteria 4558
78 Ga0451853_0032820 3300041512 Bacteria 16256
79 Ga0451577_0000854 3300042876 Bacteria 45411
80 Ga0451577_0007433 3300042876 Bacteria 10760
81 Ga0451577_0012942 3300042876 Bacteria 7829
82 Ga0451577_0050150 3300042876 Bacteria 3727
83 Ga0451577_0110047 3300042876 Bacteria 2464
84 Ga0451577_0178724 3300042876 Bacteria 1913
85 Ga0451577_0226765 3300042876 Bacteria 1689
86 Ga0453683_0000241 3300044673 Bacteria 72899
87 Ga0453683_0001486 3300044673 Bacteria 20070
88 Ga0453683_0003929 3300044673 Bacteria 10761
89 Ga0453683_0013207 3300044673 Bacteria 5398
90 Ga0453683_0013414 3300044673 Bacteria 5351
91 Ga0453683_0021191 3300044673 Bacteria 4149
92 Ga0453683_0026484 3300044673 Unclassified 3682
93 Ga0453683_0061434 3300044673 Bacteria 2349
94 Ga0453684_0001022 3300044712 Bacteria 89958
95 Ga0453684_0001284 3300044712 Bacteria 74993
96 Ga0453684_0001358 3300044712 Bacteria 71434
97 Ga0453684_0010057 3300044712 Bacteria 16264
98 Ga0453684_0018313 3300044712 Bacteria 10761
99 Ga0453684_0049096 3300044712 Bacteria 5570
100 Ga0453684_0068728 3300044712 Bacteria 4497
101 Ga0453684_0173992 3300044712 Bacteria 2534
102 Ga0453684_0211157 3300044712 Bacteria 2256
103 Ga0453684_0336448 3300044712 Bacteria 1706
104 Ga0451576_0000952 3300045051 Bacteria 54377
105 Ga0451576_0001055 3300045051 Bacteria 50745
106 Ga0451576_0006215 3300045051 Bacteria 14706
107 Ga0451576_0010264 3300045051 Bacteria 10761
108 Ga0451576_0084510 3300045051 Bacteria 3302
109 Ga0451576_0100853 3300045051 Bacteria 3002
110 Ga0451576_0250721 3300045051 Bacteria 1850
111 Ga0495627_003744 3300046453 Bacteria 6573
112 Ga0495607_0011246 3300046501 Bacteria 5970
113 Ga0495606_0070475 3300046507 Bacteria 2204
114 Ga0495643_0000554 3300046522 Bacteria 46264
115 Ga0495613_0015986 3300046689 Bacteria 5587
116 Ga0496124_0065795 3300048927 Bacteria 3021
117 Ga0501034_0017457 3300049571 Bacteria 7360
118 Ga0501047_0004839 3300049581 Bacteria 12647
119 Ga0501067_0005143 3300049583 Bacteria 7272
120 Ga0501068_0000096 3300049584 Bacteria 37679
121 Ga0501069_0029164 3300049585 Bacteria 3028
122 Ga0501070_0122976 3300049586 Bacteria 2144
123 Ga0501072_0000018 3300049588 Bacteria 158735
124 Ga0501074_0027280 3300049590 Bacteria 4141
125 Ga0501074_0034764 3300049590 Bacteria 3652
126 Ga0501077_0056183 3300049593 Bacteria 2499
127 Ga0501225_0002602 3300049705 Bacteria 5547
128 Ga0501080_0053825 3300049742 Bacteria 3748
129 Ga0501083_0013492 3300049744 Bacteria 5712
130 Ga0501035_0110189 3300049822 Bacteria 2413
131 nmdc:mga0n895_85998_c1 3300050512 Bacteria 3140
132 nmdc:mga08x19_52952_c1 3300050514 Bacteria 2611
133 Ga0500635_0010227 3300053080 Bacteria 2628
134 Ga0500641_0001527 3300053096 Bacteria 8263
135 Ga0500595_000189 3300053119 Bacteria 42008
136 Ga0500597_005358 3300053120 Bacteria 4124
137 Ga0500614_000096 3300053123 Bacteria 20613
138 Ga0500614_005637 3300053123 Bacteria 2625
139 Ga0500568_0017963 3300053139 Bacteria 3109
140 Ga0500603_003221 3300053150 Bacteria 3513
141 Ga0501084_0000113 3300054114 Bacteria 61155
142 Ga0501084_0056254 3300054114 Bacteria 3291
143 Ga0501082_0002541 3300060353 Bacteria 15984
144 2740032837 2739367866 Bacteria 4215900
145 2819589932 2818991444 Bacteria 6968812
146 2839991420 2839989709 Bacteria 3773432
147 2910247961 2910245624 Bacteria 6935613
148 2911141183 2911138879 Bacteria 5811561
149 2958514946 2958512119 Bacteria 4528530
150 Ga0070663_100028933
151 rootH1_10029960
152 Ga0070682_100001450
153 Ga0070682_100002367
154 Ga0070678_100003772
155 Ga0070698_100002276
156 Ga0068853_100002106
157 Ga0070672_100002202
158 Ga0070665_100040561
159 Ga0068855_100000020
160 Ga0068855_100003964
161 Ga0068856_100027128
162 Ga0068863_100040276
163 Ga0068863_100172666
164 Ga0070717_10039696
165 Ga0075436_100017075
166 Ga0075436_100136364
167 Ga0105245_10000065
168 Ga0105249_10192445
169 Ga0157370_10003290
170 Ga0157374_10042082
171 Ga0163163_10011296
172 Ga0157380_10000046
173 Ga0157380_10000344
174 Ga0163161_10030086
175 Ga0213875_10000436
176 Ga0207662_10077294
177 Ga0207687_10001150
178 Ga0207691_10005389
179 Ga0207667_10000284
180 Ga0207667_10014413
181 Ga0207712_10126981
182 Ga0207678_10045127
183 Ga0207676_10140881
184 Ga0207675_100026950
185 Ga0207675_100056216
186 Ga0207683_10001082
187 Ga0268266_10002404
188 Ga0265334_10008479
189 Ga0307517_10043999
190 Ga0265338_10003327
191 Ga0265338_10005427
192 Ga0265332_10007532
193 Ga0265332_10007582
194 Ga0265340_10001931
195 Ga0265339_10000108
196 Ga0265327_10008737
197 Ga0265316_10001494
198 Ga0307513_10003687
199 Ga0307509_10002402
200 Ga0307509_10008526
201 Ga0307509_10111318
202 Ga0307408_100027768
203 Ga0307508_10003016
204 Ga0265314_10000001
205 Ga0265314_10052663
206 Ga0316576_10016136
207 Ga0307516_10007331
208 Ga0307516_10066082
209 Ga0307405_10010073
210 Ga0307405_10024695
211 Ga0307406_10115261
212 Ga0307409_100133056
213 Ga0307411_10093212
214 Ga0373926_0008776
215 Ga0373936_0000079
216 Ga0373941_0016576
217 Ga0373961_0000720
218 Ga0373947_0009620
219 Ga0316584_0012408
220 Ga0395899_0011652
221 Ga0395905_0191372
222 Ga0436364_1554662
223 Ga0436365_1584543
224 Ga0451807_0048198
225 Ga0451807_0635450
226 Ga0451853_0032820
227 Ga0451577_0000854
228 Ga0451577_0007433
229 Ga0451577_0012942
230 Ga0451577_0050150
231 Ga0451577_0110047
232 Ga0451577_0178724
233 Ga0451577_0226765
234 Ga0453683_0000241
235 Ga0453683_0001486
236 Ga0453683_0003929
237 Ga0453683_0013207
238 Ga0453683_0013414
239 Ga0453683_0021191
240 Ga0453683_0026484
241 Ga0453683_0061434
242 Ga0453684_0001022
243 Ga0453684_0001284
244 Ga0453684_0001358
245 Ga0453684_0010057
246 Ga0453684_0018313
247 Ga0453684_0049096
248 Ga0453684_0068728
249 Ga0453684_0173992
250 Ga0453684_0211157
251 Ga0453684_0336448
252 Ga0451576_0000952
253 Ga0451576_0001055
254 Ga0451576_0006215
255 Ga0451576_0010264
256 Ga0451576_0084510
257 Ga0451576_0100853
258 Ga0451576_0250721
259 Ga0495627_003744
260 Ga0495607_0011246
261 Ga0495606_0070475
262 Ga0495643_0000554
263 Ga0495613_0015986
264 Ga0496124_0065795
265 Ga0501034_0017457
266 Ga0501047_0004839
267 Ga0501067_0005143
268 Ga0501068_0000096
269 Ga0501069_0029164
270 Ga0501070_0122976
271 Ga0501072_0000018
272 Ga0501074_0027280
273 Ga0501074_0034764
274 Ga0501077_0056183
275 Ga0501225_0002602
276 Ga0501080_0053825
277 Ga0501083_0013492
278 Ga0501035_0110189
279 nmdc:mga0n895_85998_c1
280 nmdc:mga08x19_52952_c1
281 Ga0500635_0010227
282 Ga0500641_0001527
283 Ga0500595_000189
284 Ga0500597_005358
285 Ga0500614_000096
286 Ga0500614_005637
287 Ga0500568_0017963
288 Ga0500603_003221
289 Ga0501084_0000113
290 Ga0501084_0056254
291 Ga0501082_0002541
292 2740032837
293 2819589932
294 2839991420
295 2910247961
296 2911141183
297 2958514946

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21688

FAD-depend_C

FAD-dependent protein, C-terminal domain-like

335

534

0.94

PF01494

FAD_binding_3

FAD binding domain

146

192

0.9

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

231

338

0.85

PF01266

DAO

FAD dependent oxidoreductase

253

400

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ffm-assembly1.cif.gz_A pylc in complex with l-lysine-ne-d-ornithine (cocrystallized with l-lysine-ne-d-ornithine) 0.912 81 112
8bk1-assembly1.cif.gz_A mutant imine reductase ir007-143 from amycolatopsis azurea, e120a, m197w, m206s, a213p, d238g, i240l 0.9086 81 111
4mo2-assembly1.cif.gz_B-2 crystal structure of udp-n-acetylgalactopyranose mutase from campylobacter jejuni 0.8883 81 115
3nlc-assembly1.cif.gz_A crystal structure of the vp0956 protein from vibrio parahaemolyticus. northeast structural genomics consortium target vpr147 0.886 1 520
6jiz-assembly1.cif.gz_A apo structure of an imine reductase at 1.76 angstrom resolution 0.8828 81 111
ID Description Score Start End Superfamily
af_A0A0P0WM81_180_403_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9232 79 286 3.50.50.60
af_O61709_2_252_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9111 82 111 3.40.50.720
4bjyA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8962 81 242 3.50.50.60
3nlcA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8884 68 522 3.50.50.60
4oqyB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8835 81 111 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A258DUM7-F1-model_v4 FAD-binding protein 0.9964 195 519
AF-A0A5Q5GGR9-F1-model_v4 deleted 0.99 395 521
AF-A0A3D4UVK3-F1-model_v4 FAD-binding protein 0.9899 161 521 GO:0016491
AF-A0A3D2IFS3-F1-model_v4 FAD-binding protein 0.9889 195 504
AF-A0A2H0Z338-F1-model_v4 FAD-dependent protein C-terminal domain-containing protein 0.9889 342 520

Map