F201855

General Info

Members Datasets Scaffolds Average Seq Length
147 116 294 264

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995470470
Length 296
Sequence SATGDSVTSDSATGDPATGDSDTLERGVPIRAARRPRGGAPLALLLPAAVGLTFLVLPLIGLLVRAPWSAMPELLSGDAVWPALRLSLICATLATGLSLVFGVPLAWLLARTTFPGRRLARTLVTLPLVMPPVVGGVALLLVFGRNGLVGQWIYQQFGYSLPFTTAGVVVAEAFVAMPFLVLSVEGALRGSDARYEEAALTLGASRFTVFRRVTLPLIAPGVGAGAVLAWARALGEFGATITFAGNFPGTTQTMPLAVYLALQDNPDAAIAVSLVLLLVSLAVLFALRGRWTTGTH

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
4 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
5 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
6 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
7 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
10 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
14 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
15 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
23 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
24 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
25 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
26 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
27 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
28 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
29 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
30 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
33 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
34 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
35 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
36 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
37 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
38 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
39 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
40 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
41 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
42 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
48 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
49 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
50 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
60 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
61 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
64 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
65 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
68 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
69 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
70 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
75 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
79 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
80 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
81 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
84 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
85 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
86 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
87 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
88 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
89 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
90 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
91 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
92 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
98 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
99 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
100 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
101 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
102 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
103 2547132424 Nocardia nova SH22a Isolate Unclassified
104 2643221696 Nocardioides sp. Root140 Isolate Unclassified
105 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
106 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
107 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
108 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
109 2855683550 Micromonospora sp. RP3T Isolate Unclassified
110 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
111 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
112 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
113 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
114 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
115 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
116 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.8
Metatranscriptomes 0
Isolates 10.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.36
Nodule 0
Rhizoplane 0
Rhizosphere 80.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10125288 3300005327 Bacteria 2138
2 Ga0070683_100010382 3300005329 Bacteria 8008
3 Ga0070684_100001089 3300005535 Bacteria 19453
4 Ga0070696_100121307 3300005546 Bacteria 1892
5 Ga0070665_100061003 3300005548 Bacteria 3780
6 Ga0070664_100367435 3300005564 Bacteria 1311
7 Ga0068857_100127762 3300005577 Bacteria 2291
8 Ga0081539_10001742 3300005985 Bacteria 34736
9 Ga0081539_10002164 3300005985 Bacteria 28891
10 Ga0070717_10107592 3300006028 Bacteria 2375
11 Ga0070712_100360077 3300006175 Bacteria 1193
12 Ga0075428_100000025 3300006844 Bacteria 124293
13 Ga0075428_100153343 3300006844 Bacteria 2503
14 Ga0114129_10029611 3300009147 Bacteria 7753
15 Ga0114129_10614792 3300009147 Bacteria 1406
16 Ga0157372_10595406 3300013307 Bacteria 1289
17 Ga0157375_11152054 3300013308 Bacteria 909
18 Ga0207693_10266876 3300025915 Bacteria 1341
19 Ga0207700_10003772 3300025928 Bacteria 8849
20 Ga0207664_10005142 3300025929 Bacteria 8914
21 Ga0207689_10411468 3300025942 Bacteria 1128
22 Ga0207661_10009466 3300025944 Bacteria 6987
23 Ga0207674_10198798 3300026116 Bacteria 1954
24 Ga0307515_10003391 3300028794 Bacteria 33563
25 Ga0307515_10011157 3300028794 Bacteria 17083
26 Ga0307515_10033153 3300028794 Bacteria 8516
27 Ga0307515_10105573 3300028794 Bacteria 3352
28 Ga0307511_10179369 3300030521 Bacteria 1145
29 Ga0307512_10020063 3300030522 Bacteria 6063
30 Ga0307513_10000002 3300031456 Bacteria 842612
31 Ga0307513_10020658 3300031456 Bacteria 7801
32 Ga0307509_10028223 3300031507 Bacteria 6243
33 Ga0307508_10000885 3300031616 Bacteria 34903
34 Ga0307508_10073065 3300031616 Bacteria 3005
35 Ga0307508_10075932 3300031616 Bacteria 2938
36 Ga0307508_10179615 3300031616 Bacteria 1719
37 Ga0307516_10006149 3300031730 Bacteria 14144
38 Ga0307516_10008652 3300031730 Bacteria 11469
39 Ga0307516_10052624 3300031730 Bacteria 3984
40 Ga0307516_10055496 3300031730 Bacteria 3866
41 Ga0307516_10351677 3300031730 Bacteria 1139
42 Ga0307405_10017420 3300031731 Bacteria 3942
43 Ga0307406_10017475 3300031901 Bacteria 4176
44 Ga0307407_10001110 3300031903 Bacteria 9399
45 Ga0307409_100172509 3300031995 Bacteria 1905
46 Ga0307409_100410863 3300031995 Bacteria 1296
47 Ga0307416_100000845 3300032002 Bacteria 16096
48 Ga0307416_100044545 3300032002 Bacteria 3485
49 Ga0307414_10244621 3300032004 Bacteria 1487
50 Ga0307414_10322176 3300032004 Bacteria 1316
51 Ga0307415_100000092 3300032126 Bacteria 37950
52 Ga0307415_100129218 3300032126 Bacteria 1909
53 Ga0307507_10000002 3300033179 Bacteria 388650
54 Ga0373951_0000033 3300035091 Bacteria 54195
55 Ga0373923_0036467 3300035111 Bacteria 2007
56 Ga0373936_0040454 3300035113 Bacteria 1867
57 Ga0373943_0157653 3300035170 Bacteria 1234
58 Ga0373942_0000031 3300035207 Bacteria 26438
59 Ga0373942_0004029 3300035207 Bacteria 3430
60 Ga0373962_0036309 3300035242 Bacteria 1371
61 Ga0373935_0088749 3300035692 Bacteria 2021
62 Ga0373937_0001615 3300036401 Bacteria 18940
63 Ga0373925_0110202 3300037068 Bacteria 2125
64 Ga0395900_0016460 3300037418 Bacteria 7540
65 Ga0395898_0101999 3300037466 Bacteria 2755
66 Ga0439433_0017950 3300041999 Bacteria 1573
67 Ga0439449_0004436 3300042007 Bacteria 5413
68 Ga0439457_020450 3300042014 Bacteria 1469
69 Ga0466969_0008537 3300044656 Bacteria 5437
70 Ga0466965_0072732 3300044683 Bacteria 1730
71 Ga0466963_0175013 3300044694 Bacteria 1497
72 Ga0466963_0217816 3300044694 Bacteria 1337
73 Ga0466964_0082025 3300044706 Bacteria 1386
74 Ga0466971_0014704 3300044719 Bacteria 3445
75 Ga0466970_0251845 3300044765 Bacteria 989
76 Ga0466960_0115773 3300044901 Bacteria 1398
77 Ga0466967_0059589 3300045976 Bacteria 3380
78 Ga0466967_0104185 3300045976 Bacteria 2597
79 Ga0466967_0169546 3300045976 Bacteria 2053
80 Ga0466967_0352142 3300045976 Bacteria 1425
81 Ga0495629_0162168 3300046459 Bacteria 1553
82 Ga0495651_0235915 3300046462 Bacteria 1257
83 Ga0495653_0035614 3300046463 Bacteria 3925
84 Ga0495580_0020093 3300046472 Bacteria 4951
85 Ga0495662_0000959 3300046476 Bacteria 14105
86 Ga0495664_0027827 3300046477 Bacteria 3298
87 Ga0495606_0001669 3300046507 Bacteria 28804
88 Ga0495608_0018614 3300046511 Bacteria 4788
89 Ga0495608_0078510 3300046511 Bacteria 2147
90 Ga0495630_0051864 3300046517 Bacteria 3071
91 Ga0495666_0003927 3300046526 Bacteria 7513
92 Ga0495666_0020531 3300046526 Bacteria 3271
93 Ga0495652_0058780 3300046529 Bacteria 3255
94 Ga0495665_0005842 3300046531 Bacteria 6638
95 Ga0495640_0020117 3300046533 Bacteria 4917
96 Ga0495586_0029227 3300046535 Bacteria 2950
97 Ga0495587_0053233 3300046536 Bacteria 2386
98 Ga0495645_0008209 3300046543 Bacteria 7281
99 Ga0495667_0004573 3300046559 Bacteria 9348
100 Ga0495668_0000775 3300046616 Bacteria 37253
101 Ga0495625_0000890 3300046660 Bacteria 40346
102 Ga0495657_0008966 3300046675 Bacteria 7610
103 Ga0495657_0116729 3300046675 Bacteria 1685
104 Ga0495599_0115561 3300046678 Bacteria 1669
105 Ga0495623_0062503 3300046679 Bacteria 2333
106 Ga0495646_0000530 3300046680 Bacteria 20421
107 Ga0495669_0048128 3300046684 Bacteria 1906
108 Ga0495613_0057077 3300046689 Bacteria 2866
109 Ga0495600_0044513 3300046809 Bacteria 2895
110 Ga0495581_0084060 3300047315 Bacteria 1844
111 Ga0495604_0002350 3300047317 Bacteria 15156
112 Ga0495604_0005648 3300047317 Bacteria 9922
113 Ga0495676_0074752 3300047321 Bacteria 2593
114 Ga0495675_0010248 3300047444 Bacteria 5852
115 Ga0495675_0163103 3300047444 Bacteria 1372
116 Ga0495684_0068963 3300047471 Bacteria 2688
117 Ga0495593_0073316 3300047673 Bacteria 1776
118 Ga0495602_0079812 3300048088 Bacteria 2758
119 Ga0495626_0000766 3300048091 Bacteria 29498
120 Ga0501080_0149586 3300049742 Bacteria 2159
121 nmdc:mga05p37_1125249_c1 3300050507 Bacteria 820
122 nmdc:mga05p37_353075_c1 3300050507 Bacteria 1731
123 nmdc:mga09592_135679_c1 3300050508 Bacteria 2120
124 nmdc:mga0a205_87764_c1 3300050515 Bacteria 3005
125 Ga0495601_0015663 3300053077 Bacteria 4584
126 Ga0495601_0021130 3300053077 Bacteria 3983
127 Ga0495612_0012044 3300053078 Bacteria 3484
128 Ga0495619_0004583 3300053085 Bacteria 8829
129 Ga0495619_0129541 3300053085 Bacteria 1733
130 Ga0500644_0004655 3300053088 Bacteria 3442
131 Ga0500630_051754 3300053159 Bacteria 1983
132 Ga0466962_0039028 3300061719 Bacteria 2274
133 2995470470 2995463766 Bacteria 8577691
134 2548698035 2547132424 Bacteria 8348532
135 2644533233 2643221696 Bacteria 5431823
136 2731906370 2731639228 Bacteria 4187555
137 2753076495 2751185734 Bacteria 8863695
138 2819739328 2818991472 Bacteria 10089953
139 2837275112 2837268691 Bacteria 7850704
140 2855689182 2855683550 Bacteria 7134265
141 2867509241 2867507094 Bacteria 6506033
142 2880501448 2880495981 Bacteria 7340502
143 2887480262 2887478801 Bacteria 8972725
144 2919715778 2919713450 Bacteria 7431245
145 8003834482 8003830390 Bacteria 6541657
146 8003862422 8003856774 Bacteria 7675274
147 8056055984 8056054917 Bacteria 5736694
148 Ga0070658_10125288
149 Ga0070683_100010382
150 Ga0070684_100001089
151 Ga0070696_100121307
152 Ga0070665_100061003
153 Ga0070664_100367435
154 Ga0068857_100127762
155 Ga0081539_10001742
156 Ga0081539_10002164
157 Ga0070717_10107592
158 Ga0070712_100360077
159 Ga0075428_100000025
160 Ga0075428_100153343
161 Ga0114129_10029611
162 Ga0114129_10614792
163 Ga0157372_10595406
164 Ga0157375_11152054
165 Ga0207693_10266876
166 Ga0207700_10003772
167 Ga0207664_10005142
168 Ga0207689_10411468
169 Ga0207661_10009466
170 Ga0207674_10198798
171 Ga0307515_10003391
172 Ga0307515_10011157
173 Ga0307515_10033153
174 Ga0307515_10105573
175 Ga0307511_10179369
176 Ga0307512_10020063
177 Ga0307513_10000002
178 Ga0307513_10020658
179 Ga0307509_10028223
180 Ga0307508_10000885
181 Ga0307508_10073065
182 Ga0307508_10075932
183 Ga0307508_10179615
184 Ga0307516_10006149
185 Ga0307516_10008652
186 Ga0307516_10052624
187 Ga0307516_10055496
188 Ga0307516_10351677
189 Ga0307405_10017420
190 Ga0307406_10017475
191 Ga0307407_10001110
192 Ga0307409_100172509
193 Ga0307409_100410863
194 Ga0307416_100000845
195 Ga0307416_100044545
196 Ga0307414_10244621
197 Ga0307414_10322176
198 Ga0307415_100000092
199 Ga0307415_100129218
200 Ga0307507_10000002
201 Ga0373951_0000033
202 Ga0373923_0036467
203 Ga0373936_0040454
204 Ga0373943_0157653
205 Ga0373942_0000031
206 Ga0373942_0004029
207 Ga0373962_0036309
208 Ga0373935_0088749
209 Ga0373937_0001615
210 Ga0373925_0110202
211 Ga0395900_0016460
212 Ga0395898_0101999
213 Ga0439433_0017950
214 Ga0439449_0004436
215 Ga0439457_020450
216 Ga0466969_0008537
217 Ga0466965_0072732
218 Ga0466963_0175013
219 Ga0466963_0217816
220 Ga0466964_0082025
221 Ga0466971_0014704
222 Ga0466970_0251845
223 Ga0466960_0115773
224 Ga0466967_0059589
225 Ga0466967_0104185
226 Ga0466967_0169546
227 Ga0466967_0352142
228 Ga0495629_0162168
229 Ga0495651_0235915
230 Ga0495653_0035614
231 Ga0495580_0020093
232 Ga0495662_0000959
233 Ga0495664_0027827
234 Ga0495606_0001669
235 Ga0495608_0018614
236 Ga0495608_0078510
237 Ga0495630_0051864
238 Ga0495666_0003927
239 Ga0495666_0020531
240 Ga0495652_0058780
241 Ga0495665_0005842
242 Ga0495640_0020117
243 Ga0495586_0029227
244 Ga0495587_0053233
245 Ga0495645_0008209
246 Ga0495667_0004573
247 Ga0495668_0000775
248 Ga0495625_0000890
249 Ga0495657_0008966
250 Ga0495657_0116729
251 Ga0495599_0115561
252 Ga0495623_0062503
253 Ga0495646_0000530
254 Ga0495669_0048128
255 Ga0495613_0057077
256 Ga0495600_0044513
257 Ga0495581_0084060
258 Ga0495604_0002350
259 Ga0495604_0005648
260 Ga0495676_0074752
261 Ga0495675_0010248
262 Ga0495675_0163103
263 Ga0495684_0068963
264 Ga0495593_0073316
265 Ga0495602_0079812
266 Ga0495626_0000766
267 Ga0501080_0149586
268 nmdc:mga05p37_1125249_c1
269 nmdc:mga05p37_353075_c1
270 nmdc:mga09592_135679_c1
271 nmdc:mga0a205_87764_c1
272 Ga0495601_0015663
273 Ga0495601_0021130
274 Ga0495612_0012044
275 Ga0495619_0004583
276 Ga0495619_0129541
277 Ga0500644_0004655
278 Ga0500630_051754
279 Ga0466962_0039028
280 2995470470
281 2548698035
282 2644533233
283 2731906370
284 2753076495
285 2819739328
286 2837275112
287 2855689182
288 2867509241
289 2880501448
290 2887480262
291 2919715778
292 8003834482
293 8003862422
294 8056055984

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

102

292

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2onk-assembly2.cif.gz_I abc transporter modbc in complex with its binding protein moda 0.8549 8 254
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.852 6 252
3d31-assembly1.cif.gz_C modbc from methanosarcina acetivorans 0.8456 6 252
2onk-assembly2.cif.gz_I abc transporter modbc in complex with its binding protein moda 0.8215 8 254
8hpl-assembly1.cif.gz_A lpqy-sugabc in state 1 0.7781 9 260
ID Description Score Start End Superfamily
af_P9WG13_10_255_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8824 9 252 1.10.3720.10
af_Q2FVX5_4_220_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8816 51 253 1.10.3720.10
af_P16701_14_273_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8707 6 254 1.10.3720.10
af_P9WG13_10_255_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.869 9 252 1.10.3720.10
af_P0AF01_2_224_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8678 41 250 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A351U4X3-F1-model_v4 deleted 0.9772 41 205
AF-A0A2N5ZSU1-F1-model_v4 Molybdate ABC transporter permease subunit 0.9759 43 201 GO:0005886
GO:0055085
AF-A0A4S3LV60-F1-model_v4 Molybdate ABC transporter permease subunit 0.9701 46 193 GO:0005886
GO:0055085
AF-A0A3D2F8L9-F1-model_v4 Molybdate ABC transporter permease subunit 0.9701 42 191 GO:0005886
GO:0055085
AF-A0A351U4X3-F1-model_v4 deleted 0.9656 41 205

Map