F199732

General Info

Members Datasets Scaffolds Average Seq Length
147 49 274 548

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100082109|Ga0070706_1000821092
Length 592
Sequence MCVLANLLVHVTPAYWTLATGNRTVIGLAACGAHHKGGFPMHVQRSQQTSDLRRRDLLKAGLAAGVTLSARSLAGPAVLWGAEAGQPKRGGILRVRGRDPVHFDPHLTINVRTQSTLSFVYSKLVRHKVGADVRPGTFIVEPDLAERWEEVDDTTYIFHLRKGVKWHNKPPVNGRELVAEDVKFTFDRFLTETANVDRYILESVDRVEVVDRYTVKFLLKEPYVWLLNVLANPRSMWIIAPEVVEKYGDLKKVETAIGTGPFLLERYEPNVKTVFKRNPDYFRDGQPYVDGVEWLVVDDPSAGLAMYRTGQLDCGAWHWWSVRQEDLDSLKKTHSHLMYQDFLSPVSHAIYMRTDMPPFSDVRVRRAISQAVNRQEIIDAVWVRAEPTPAVSRGLPEWSPRIDELGAGAKYYQYDPKEARRLLAEAGVPKGFKTQLHVTSGLGPHHIDIAQLAQRSLKEVGIEAELKIEEYGAYMATTFAGKFEGLAIGPLSIAWEPDSVLYGLYAPDQPRNNGHVNDPKITDMLKEQRRTQDLEARKKLIFDLQRYIAEQQYYVYLYAVGVTGTWQPYVKSYAPNPTFDYGGRSAALWLDR

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
35 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
38 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
39 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
40 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
41 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
42 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
43 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
44 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
45 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
46 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
47 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
48 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
49 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 19.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100082109 3300005467 Unclassified 2985
2 JGI25405J52794_10001846 3300003911 Bacteria 3562
3 JGI25405J52794_10002709 3300003911 Bacteria 3075
4 Ga0065707_10087009 3300005295 Bacteria 5206
5 Ga0065707_10088515 3300005295 Bacteria 4636
6 Ga0070701_10067256 3300005438 Bacteria 1906
7 Ga0070700_100062128 3300005441 Bacteria 2359
8 Ga0070694_100062941 3300005444 Bacteria 2535
9 Ga0070707_100178273 3300005468 Bacteria 2071
10 Ga0070699_100116877 3300005518 Bacteria 2344
11 Ga0070686_100024803 3300005544 Unclassified 3598
12 Ga0070704_100036156 3300005549 Bacteria 3363
13 Ga0068857_100133772 3300005577 Bacteria 2238
14 Ga0068859_100011076 3300005617 Bacteria 9073
15 Ga0068859_100011157 3300005617 Bacteria 9035
16 Ga0068860_100030567 3300005843 Bacteria 5179
17 Ga0068862_100006185 3300005844 Bacteria 9969
18 Ga0081455_10001306 3300005937 Bacteria 30911
19 Ga0081455_10002224 3300005937 Bacteria 23098
20 Ga0081455_10004498 3300005937 Bacteria 15593
21 Ga0081455_10018315 3300005937 Bacteria 6676
22 Ga0081455_10019795 3300005937 Bacteria 6356
23 Ga0081455_10026005 3300005937 Bacteria 5392
24 Ga0081455_10039611 3300005937 Unclassified 4163
25 Ga0081455_10079689 3300005937 Bacteria 2688
26 Ga0081538_10002934 3300005981 Bacteria 16277
27 Ga0081538_10003480 3300005981 Bacteria 14865
28 Ga0081538_10029476 3300005981 Bacteria 3748
29 Ga0081538_10030280 3300005981 Bacteria 3678
30 Ga0081538_10038022 3300005981 Unclassified 3112
31 Ga0081538_10040663 3300005981 Unclassified 2962
32 Ga0081538_10048533 3300005981 Bacteria 2587
33 Ga0081538_10051464 3300005981 Bacteria 2473
34 Ga0081538_10055766 3300005981 Unclassified 2322
35 Ga0081540_1032754 3300005983 Unclassified 2832
36 Ga0081540_1049517 3300005983 Bacteria 2095
37 Ga0081539_10021485 3300005985 Unclassified 4310
38 Ga0081539_10024962 3300005985 Unclassified 3863
39 Ga0081539_10030342 3300005985 Bacteria 3358
40 Ga0081539_10060972 3300005985 Bacteria 2069
41 Ga0075428_100005759 3300006844 Bacteria 13766
42 Ga0075428_100013303 3300006844 Bacteria 9154
43 Ga0075428_100025448 3300006844 Bacteria 6550
44 Ga0075428_100029966 3300006844 Bacteria 6019
45 Ga0075428_100047389 3300006844 Bacteria 4721
46 Ga0075428_100048632 3300006844 Unclassified 4654
47 Ga0075428_100096181 3300006844 Bacteria 3228
48 Ga0075428_100099807 3300006844 Bacteria 3165
49 Ga0075428_100128516 3300006844 Unclassified 2757
50 Ga0075428_100141333 3300006844 Unclassified 2617
51 Ga0075428_100210234 3300006844 Unclassified 2102
52 Ga0075428_100245253 3300006844 Bacteria 1932
53 Ga0075430_100011139 3300006846 Bacteria 7622
54 Ga0075430_100127266 3300006846 Bacteria 2123
55 Ga0075430_100127527 3300006846 Bacteria 2121
56 Ga0075430_100162200 3300006846 Unclassified 1861
57 Ga0075431_100022263 3300006847 Bacteria 6479
58 Ga0075431_100024284 3300006847 Bacteria 6209
59 Ga0075431_100033114 3300006847 Bacteria 5326
60 Ga0075431_100036604 3300006847 Bacteria 5054
61 Ga0075431_100047888 3300006847 Bacteria 4408
62 Ga0075431_100089284 3300006847 Bacteria 3181
63 Ga0075431_100142927 3300006847 Bacteria 2467
64 Ga0075429_100015080 3300006880 Bacteria 6697
65 Ga0075429_100025761 3300006880 Bacteria 5107
66 Ga0075429_100027093 3300006880 Unclassified 4975
67 Ga0075429_100134105 3300006880 Bacteria 2167
68 Ga0097620_100011078 3300006931 Bacteria 9073
69 Ga0097620_100011156 3300006931 Bacteria 9035
70 Ga0099794_10003531 3300007265 Bacteria 5990
71 Ga0111539_10048903 3300009094 Bacteria 5047
72 Ga0111539_10115235 3300009094 Bacteria 3152
73 Ga0111539_10136720 3300009094 Bacteria 2870
74 Ga0111539_10261634 3300009094 Unclassified 2014
75 Ga0114129_10009730 3300009147 Bacteria 13712
76 Ga0114129_10031027 3300009147 Bacteria 7559
77 Ga0114129_10047387 3300009147 Bacteria 6039
78 Ga0114129_10048229 3300009147 Bacteria 5985
79 Ga0114129_10048283 3300009147 Bacteria 5981
80 Ga0114129_10059377 3300009147 Bacteria 5347
81 Ga0114129_10158340 3300009147 Bacteria 3096
82 Ga0114129_10220176 3300009147 Bacteria 2561
83 Ga0105249_10015967 3300009553 Bacteria 6655
84 Ga0105249_10033712 3300009553 Unclassified 4636
85 Ga0105249_10090209 3300009553 Unclassified 2865
86 Ga0163162_10067049 3300013306 Bacteria 3639
87 Ga0207646_10010916 3300025922 Bacteria 8824
88 Ga0207712_10019728 3300025961 Bacteria 4406
89 Ga0207712_10040872 3300025961 Bacteria 3185
90 Ga0207712_10075398 3300025961 Unclassified 2438
91 Ga0207708_10048687 3300026075 Bacteria 3227
92 Ga0207674_10148297 3300026116 Bacteria 2303
93 Ga0207675_100042892 3300026118 Bacteria 4224
94 Ga0207675_100085454 3300026118 Bacteria 2961
95 Ga0207428_10111352 3300027907 Bacteria 2106
96 Ga0268265_10015270 3300028380 Bacteria 5251
97 Ga0268265_10032073 3300028380 Bacteria 3801
98 Ga0268264_10031296 3300028381 Bacteria 4363
99 Ga0395898_0004641 3300037466 Bacteria 14976
100 Ga0395901_0001247 3300038443 Bacteria 27074
101 Ga0451577_0027246 3300042876 Bacteria 5171
102 Ga0453683_0029343 3300044673 Bacteria 3478
103 Ga0453684_0041370 3300044712 Bacteria 6235
104 Ga0451576_0155763 3300045051 Bacteria 2383
105 nmdc:mga05p37_109504_c1 3300050507 Bacteria 3398
106 nmdc:mga05p37_11338_c1 3300050507 Bacteria 10603
107 nmdc:mga05p37_11363_c1 3300050507 Bacteria 10595
108 nmdc:mga05p37_12323_c1 3300050507 Bacteria 10213
109 nmdc:mga05p37_130210_c1 3300050507 Unclassified 3087
110 nmdc:mga05p37_149534_c1 3300050507 Bacteria 2858
111 nmdc:mga05p37_17041_c1 3300050507 Bacteria 8763
112 nmdc:mga05p37_17899_c1 3300050507 Bacteria 8553
113 nmdc:mga05p37_24436_c1 3300050507 Bacteria 7344
114 nmdc:mga05p37_56299_c1 3300050507 Bacteria 4841
115 nmdc:mga05p37_70491_c1 3300050507 Bacteria 4299
116 nmdc:mga05p37_9247_c1 3300050507 Bacteria 11645
117 nmdc:mga09592_17993_c1 3300050508 Bacteria 5791
118 nmdc:mga09592_23799_c1 3300050508 Bacteria 5060
119 nmdc:mga09592_79584_c1 3300050508 Unclassified 2790
120 nmdc:mga09592_9901_c1 3300050508 Bacteria 7752
121 nmdc:mga09592_99238_c1 3300050508 Bacteria 2493
122 nmdc:mga0qj67_155805_c1 3300050509 Unclassified 1854
123 nmdc:mga0qj67_196940_c1 3300050509 Bacteria 1637
124 nmdc:mga0qj67_69526_c1 3300050509 Bacteria 2808
125 nmdc:mga0qj67_79847_c1 3300050509 Bacteria 2620
126 nmdc:mga06r32_12399_c1 3300050510 Bacteria 7691
127 nmdc:mga06r32_40910_c1 3300050510 Unclassified 4402
128 nmdc:mga06r32_55456_c1 3300050510 Unclassified 3801
129 nmdc:mga06r32_58245_c1 3300050510 Unclassified 3713
130 nmdc:mga08y16_146033_c1 3300050511 Bacteria 2459
131 nmdc:mga08y16_179604_c1 3300050511 Bacteria 2198
132 nmdc:mga08y16_278824_c1 3300050511 Unclassified 1724
133 nmdc:mga08y16_94502_c1 3300050511 Bacteria 3114
134 nmdc:mga0n895_110834_c1 3300050512 Bacteria 2760
135 nmdc:mga0n895_89143_c1 3300050512 Bacteria 3085
136 nmdc:mga0a205_200130_c1 3300050515 Bacteria 1888
137 nmdc:mga0a205_28767_c1 3300050515 Bacteria 5314
138 Ga0070706_100082109
139 JGI25405J52794_10001846
140 JGI25405J52794_10002709
141 Ga0065707_10087009
142 Ga0065707_10088515
143 Ga0070701_10067256
144 Ga0070700_100062128
145 Ga0070694_100062941
146 Ga0070707_100178273
147 Ga0070699_100116877
148 Ga0070686_100024803
149 Ga0070704_100036156
150 Ga0068857_100133772
151 Ga0068859_100011076
152 Ga0068859_100011157
153 Ga0068860_100030567
154 Ga0068862_100006185
155 Ga0081455_10001306
156 Ga0081455_10002224
157 Ga0081455_10004498
158 Ga0081455_10018315
159 Ga0081455_10019795
160 Ga0081455_10026005
161 Ga0081455_10039611
162 Ga0081455_10079689
163 Ga0081538_10002934
164 Ga0081538_10003480
165 Ga0081538_10029476
166 Ga0081538_10030280
167 Ga0081538_10038022
168 Ga0081538_10040663
169 Ga0081538_10048533
170 Ga0081538_10051464
171 Ga0081538_10055766
172 Ga0081540_1032754
173 Ga0081540_1049517
174 Ga0081539_10021485
175 Ga0081539_10024962
176 Ga0081539_10030342
177 Ga0081539_10060972
178 Ga0075428_100005759
179 Ga0075428_100013303
180 Ga0075428_100025448
181 Ga0075428_100029966
182 Ga0075428_100047389
183 Ga0075428_100048632
184 Ga0075428_100096181
185 Ga0075428_100099807
186 Ga0075428_100128516
187 Ga0075428_100141333
188 Ga0075428_100210234
189 Ga0075428_100245253
190 Ga0075430_100011139
191 Ga0075430_100127266
192 Ga0075430_100127527
193 Ga0075430_100162200
194 Ga0075431_100022263
195 Ga0075431_100024284
196 Ga0075431_100033114
197 Ga0075431_100036604
198 Ga0075431_100047888
199 Ga0075431_100089284
200 Ga0075431_100142927
201 Ga0075429_100015080
202 Ga0075429_100025761
203 Ga0075429_100027093
204 Ga0075429_100134105
205 Ga0097620_100011078
206 Ga0097620_100011156
207 Ga0099794_10003531
208 Ga0111539_10048903
209 Ga0111539_10115235
210 Ga0111539_10136720
211 Ga0111539_10261634
212 Ga0114129_10009730
213 Ga0114129_10031027
214 Ga0114129_10047387
215 Ga0114129_10048229
216 Ga0114129_10048283
217 Ga0114129_10059377
218 Ga0114129_10158340
219 Ga0114129_10220176
220 Ga0105249_10015967
221 Ga0105249_10033712
222 Ga0105249_10090209
223 Ga0163162_10067049
224 Ga0207646_10010916
225 Ga0207712_10019728
226 Ga0207712_10040872
227 Ga0207712_10075398
228 Ga0207708_10048687
229 Ga0207674_10148297
230 Ga0207675_100042892
231 Ga0207675_100085454
232 Ga0207428_10111352
233 Ga0268265_10015270
234 Ga0268265_10032073
235 Ga0268264_10031296
236 Ga0395898_0004641
237 Ga0395901_0001247
238 Ga0451577_0027246
239 Ga0453683_0029343
240 Ga0453684_0041370
241 Ga0451576_0155763
242 nmdc:mga05p37_109504_c1
243 nmdc:mga05p37_11338_c1
244 nmdc:mga05p37_11363_c1
245 nmdc:mga05p37_12323_c1
246 nmdc:mga05p37_130210_c1
247 nmdc:mga05p37_149534_c1
248 nmdc:mga05p37_17041_c1
249 nmdc:mga05p37_17899_c1
250 nmdc:mga05p37_24436_c1
251 nmdc:mga05p37_56299_c1
252 nmdc:mga05p37_70491_c1
253 nmdc:mga05p37_9247_c1
254 nmdc:mga09592_17993_c1
255 nmdc:mga09592_23799_c1
256 nmdc:mga09592_79584_c1
257 nmdc:mga09592_9901_c1
258 nmdc:mga09592_99238_c1
259 nmdc:mga0qj67_155805_c1
260 nmdc:mga0qj67_196940_c1
261 nmdc:mga0qj67_69526_c1
262 nmdc:mga0qj67_79847_c1
263 nmdc:mga06r32_12399_c1
264 nmdc:mga06r32_40910_c1
265 nmdc:mga06r32_55456_c1
266 nmdc:mga06r32_58245_c1
267 nmdc:mga08y16_146033_c1
268 nmdc:mga08y16_179604_c1
269 nmdc:mga08y16_278824_c1
270 nmdc:mga08y16_94502_c1
271 nmdc:mga0n895_110834_c1
272 nmdc:mga0n895_89143_c1
273 nmdc:mga0a205_200130_c1
274 nmdc:mga0a205_28767_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00496

SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

140

512

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8767 50 550
6hlx-assembly1.cif.gz_A structure of the pbp agaa in complex with agropinic acid from a.tumefacien r10 0.8666 50 550
5f1q-assembly2.cif.gz_B crystal structure of periplasmic dipeptide transport protein from yersinia pestis 0.8464 51 548
1dpp-assembly4.cif.gz_G dipeptide binding protein complex with glycyl-l-leucine 0.8402 51 549
6ofq-assembly1.cif.gz_A abc transporter-associated periplasmic binding protein dppa from helicobacter pylori in complex with peptide stsa 0.8362 47 550
ID Description Score Start End Superfamily
6hlxA02 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.9067 59 218 3.90.76.10
1uqwB02 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.9027 62 208 3.90.76.10
af_P76128_42_177_3.90.76.10 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.8968 63 204 3.90.76.10
6hlxA02 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.8953 59 218 3.90.76.10
af_P76128_42_177_3.90.76.10 Alpha Beta;Alpha-Beta Complex;Dipeptide-binding Protein; domain 1;Dipeptide-binding Protein; Domain 1 0.8784 63 204 3.90.76.10
ID Description Score Start End GO Terms
AF-A0A2H5YEU9-F1-model_v4 Heme-binding protein A 0.9255 125 550 GO:0015031
GO:0015833
GO:0030313
GO:0042597
GO:0043190
GO:1904680
AF-A0A7V1QSV4-F1-model_v4 ABC transporter substrate-binding protein 0.9124 231 548 GO:0015833
GO:1904680
AF-X1J064-F1-model_v4 Solute-binding protein family 5 domain-containing protein 0.9079 284 532 GO:0015833
GO:1904680
AF-A0A2H5YEU9-F1-model_v4 Heme-binding protein A 0.9072 125 550 GO:0015031
GO:0015833
GO:0030313
GO:0042597
GO:0043190
GO:1904680
AF-A0A3D3TNV2-F1-model_v4 ABC transporter substrate-binding protein 0.9063 295 535 GO:0015031
GO:0015833
GO:0030313
GO:1904680

Map