F196184

General Info

Members Datasets Scaffolds Average Seq Length
145 122 138 641

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054472261|8054475348
Length 718
Sequence GDTAPRRHRDTPTPHHRNARHRDTGTRFAAGDRERSVPGTSVAGVTSAHAAPPAPGHDGPPAVLPFGSWPTPITSERVVEASVRLSGARTDGDAVIWAEARPTEGGRTQLVRRAPDGSTVDLLPEGFDARTGVHEYGGGSWWVRDGVVWFANWVDQRLYRLAPGGAPEPLTPEPAFPRADRYADGFLTWDGSAILAIRERHAPEGGAAAVRNEIVRLAADRPSEPEVLVSGPDFVTSPRLSPDGVRLVWVQWDHPSMPWDDTVLMGRNVETGDEAVIAGGPGESVSEPRWQADGSLWFLSDRTGWWNLYRWLPGHDIEPVVVLDAEIGVPGWQLGSARYAVLPGGRVVFARWSTGYDGLGVREPDGEFTELDLPFSAVSSVVPYGVGSVLVVAGTPTEEPGVHVVSVDGDLETLRAPRELGVDDGYVSVPESISFPSVDVEGAERTAHALYYPPANPAAVGPEGALPPLLVVIHGGPTAAAMPVLSVGVQYWTSRGFGVVDVNYGGSTGFGRAYREQLKGAWGIVDVADCLAAARYLATTGRVDGDRLAIRGGSAGGYTTLAALARADTPFSAGADHFGVADLEALAADTHKFESRYLDGLVGPYPAARAVYVERSPIRHVELFRTPLIVLQGAEDAIVPPNQSEAIVDALRARHVPVAYLLFPGEQHGFRRSENIRRALDAELSFYAQVFGFALPEAEGIEPVRVENLRRGDQAGGR

Samples

Sample ID Description Type Environment
1 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
2 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
3 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
4 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
33 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
36 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
37 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
57 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
64 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
65 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
66 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
67 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
68 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
69 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
77 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
78 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
83 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
84 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
85 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
86 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
87 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
98 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
99 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
100 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
108 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
109 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
110 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
111 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
112 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
113 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
114 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
115 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
116 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
117 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
120 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
121 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
122 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.17
Metatranscriptomes 0
Isolates 4.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.97
Nodule 0
Rhizoplane 2.07
Rhizosphere 70.34
Stem 0
Stem Tuber 0.69
Unclassified 17.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000145 3300003203 Bacteria 30858
2 JGI25153J46596_10000014 3300003215 Bacteria 298101
3 Ga0070658_10014254 3300005327 Bacteria 6378
4 Ga0070683_100078967 3300005329 Bacteria 3079
5 Ga0068868_100042980 3300005338 Bacteria 3529
6 Ga0070660_100000505 3300005339 Bacteria 26077
7 Ga0070668_100105659 3300005347 Bacteria 2236
8 Ga0070671_100014053 3300005355 Bacteria 6463
9 Ga0070671_100014074 3300005355 Bacteria 6459
10 Ga0070681_10001391 3300005458 Bacteria 21212
11 Ga0070684_100069504 3300005535 Bacteria 3097
12 Ga0068855_100005909 3300005563 Bacteria 14926
13 Ga0068861_100036201 3300005719 Bacteria 3661
14 Ga0068863_100013102 3300005841 Bacteria 7999
15 Ga0068860_100124093 3300005843 Bacteria 2475
16 Ga0081455_10033948 3300005937 Bacteria 4577
17 Ga0081539_10000163 3300005985 Bacteria 156102
18 Ga0081539_10001168 3300005985 Bacteria 47546
19 Ga0081539_10001443 3300005985 Bacteria 40679
20 Ga0081539_10003083 3300005985 Bacteria 21436
21 Ga0070715_10000016 3300006163 Bacteria 134692
22 Ga0070716_100000018 3300006173 Bacteria 84686
23 Ga0070716_100064046 3300006173 Bacteria 2136
24 Ga0075429_100017662 3300006880 Bacteria 6170
25 Ga0075436_100000014 3300006914 Bacteria 175616
26 Ga0075435_100001663 3300007076 Bacteria 14422
27 Ga0111539_10005774 3300009094 Bacteria 15998
28 Ga0105245_10024121 3300009098 Bacteria 5341
29 Ga0105245_10040149 3300009098 Bacteria 4168
30 Ga0105245_10057753 3300009098 Bacteria 3491
31 Ga0105247_10001880 3300009101 Bacteria 14704
32 Ga0114129_10140216 3300009147 Unclassified 3315
33 Ga0105241_10033444 3300009174 Bacteria 3860
34 Ga0105242_10014378 3300009176 Bacteria 6132
35 Ga0163161_10018708 3300017792 Bacteria 4857
36 Ga0213873_10000073 3300021358 Bacteria 21479
37 Ga0213876_10000539 3300021384 Bacteria 28515
38 Ga0213875_10002952 3300021388 Bacteria 9905
39 Ga0213875_10003013 3300021388 Bacteria 9784
40 Ga0209758_1000005 3300025297 Bacteria 1368918
41 Ga0209758_1013924 3300025297 Bacteria 4331
42 Ga0209050_1004934 3300025298 Bacteria 8706
43 Ga0209257_1000504 3300025304 Bacteria 68999
44 Ga0207710_10000477 3300025900 Bacteria 25496
45 Ga0207688_10011736 3300025901 Bacteria 4766
46 Ga0207685_10000044 3300025905 Bacteria 50458
47 Ga0207699_10035063 3300025906 Bacteria 2852
48 Ga0207707_10036378 3300025912 Bacteria 4305
49 Ga0207707_10091258 3300025912 Bacteria 2662
50 Ga0207657_10006496 3300025919 Bacteria 12116
51 Ga0207687_10075664 3300025927 Bacteria 2417
52 Ga0207644_10017013 3300025931 Bacteria 4902
53 Ga0207644_10025703 3300025931 Bacteria 4050
54 Ga0207686_10000667 3300025934 Bacteria 21210
55 Ga0207665_10015173 3300025939 Bacteria 5060
56 Ga0207689_10015236 3300025942 Bacteria 6509
57 Ga0207667_10020331 3300025949 Bacteria 7389
58 Ga0207677_10021993 3300026023 Bacteria 3910
59 Ga0207641_10002688 3300026088 Bacteria 16222
60 Ga0268266_10019837 3300028379 Bacteria 5730
61 Ga0307512_10006928 3300030522 Bacteria 11330
62 Ga0307513_10011108 3300031456 Bacteria 11226
63 Ga0307509_10086865 3300031507 Bacteria 3215
64 Ga0307407_10012056 3300031903 Bacteria 4143
65 Ga0307416_100074126 3300032002 Bacteria 2842
66 Ga0307411_10018483 3300032005 Bacteria 4000
67 Ga0373933_0007611 3300035724 Bacteria 5914
68 Ga0395905_0182420 3300037471 Bacteria 1971
69 Ga0436364_0164856 3300037853 Bacteria 24765
70 Ga0436364_0249092 3300037853 Bacteria 9923
71 Ga0436364_0714254 3300037853 Bacteria 36578
72 Ga0400483_067404 3300039062 Bacteria 6169
73 Ga0400489_58569 3300039093 Bacteria 14880
74 Ga0400487_63844 3300039110 Bacteria 34093
75 Ga0436365_0381713 3300039437 Bacteria 41304
76 Ga0436365_1445421 3300039437 Bacteria 6531
77 Ga0436362_1214233 3300039453 Bacteria 21829
78 Ga0466972_0001993 3300044658 Bacteria 9987
79 Ga0453683_0060789 3300044673 Bacteria 2362
80 Ga0466965_0002190 3300044683 Bacteria 8216
81 Ga0466966_0036889 3300044684 Bacteria 3155
82 Ga0466963_0019804 3300044694 Bacteria 4226
83 Ga0466970_0020178 3300044765 Bacteria 3460
84 Ga0451576_0098498 3300045051 Unclassified 3041
85 Ga0495625_0062377 3300046660 Bacteria 2635
86 Ga0495636_0003810 3300047318 Bacteria 5877
87 Ga0495672_0000436 3300047320 Bacteria 49779
88 Ga0495686_0022636 3300047472 Bacteria 4157
89 Ga0496102_0000102 3300048905 Bacteria 122251
90 Ga0496103_0000090 3300048906 Bacteria 101941
91 Ga0496105_0003894 3300048908 Bacteria 11156
92 Ga0496116_0000364 3300048919 Bacteria 69617
93 Ga0496116_0004412 3300048919 Bacteria 13448
94 Ga0496117_0000148 3300048920 Bacteria 149369
95 Ga0496118_0000114 3300048921 Bacteria 148007
96 Ga0496119_0000525 3300048922 Bacteria 52134
97 Ga0496121_0015954 3300048924 Bacteria 7794
98 Ga0496126_0000355 3300048929 Bacteria 95787
99 Ga0501032_0005766 3300049569 Bacteria 9160
100 Ga0501033_0003537 3300049570 Bacteria 12781
101 Ga0501034_0109931 3300049571 Bacteria 2747
102 Ga0501036_0000617 3300049572 Bacteria 25881
103 Ga0501037_0066546 3300049573 Bacteria 2624
104 Ga0501038_0012779 3300049574 Bacteria 7670
105 Ga0501039_0005889 3300049575 Bacteria 9289
106 Ga0501043_0000556 3300049579 Bacteria 33438
107 Ga0501043_0014329 3300049579 Bacteria 6205
108 Ga0501048_0016730 3300049582 Bacteria 5406
109 Ga0501067_0018770 3300049583 Bacteria 3828
110 Ga0501068_0006757 3300049584 Bacteria 6338
111 Ga0501068_0025959 3300049584 Bacteria 3448
112 Ga0501069_0000586 3300049585 Bacteria 16853
113 Ga0501073_0001521 3300049589 Bacteria 17169
114 Ga0501073_0004369 3300049589 Bacteria 10616
115 Ga0501074_0008268 3300049590 Bacteria 7544
116 Ga0501080_0008077 3300049742 Bacteria 9538
117 Ga0501080_0019367 3300049742 Bacteria 6306
118 Ga0501080_0106769 3300049742 Bacteria 2595
119 Ga0501083_0006362 3300049744 Bacteria 8370
120 Ga0501035_0010382 3300049822 Bacteria 8637
121 Ga0501044_0054725 3300049823 Bacteria 4100
122 Ga0501044_0056220 3300049823 Bacteria 4039
123 nmdc:mga05p37_50080_c1 3300050507 Bacteria 5136
124 nmdc:mga08y16_14097_c1 3300050511 Bacteria 8414
125 nmdc:mga0n895_96119_c1 3300050512 Bacteria 2967
126 nmdc:mga0rr50_1141_c1 3300050513 Bacteria 14422
127 nmdc:mga08x19_56_c1 3300050514 Bacteria 120839
128 Ga0500643_007170 3300053087 Bacteria 4556
129 Ga0500646_0003159 3300053090 Bacteria 4233
130 Ga0500651_0003165 3300053093 Bacteria 8933
131 Ga0500595_004902 3300053119 Bacteria 5920
132 Ga0500595_028004 3300053119 Bacteria 1924
133 Ga0500642_0000551 3300053130 Bacteria 11333
134 Ga0500577_0002140 3300053142 Bacteria 5040
135 Ga0500604_0002813 3300053151 Bacteria 4724
136 Ga0501084_0029694 3300054114 Bacteria 4574
137 Ga0501082_0016607 3300060353 Bacteria 6337
138 Ga0501082_0063432 3300060353 Bacteria 3181

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300009174 Ga0105241_10033444 Ga0105241_100334443 577
2 3300053119 Ga0500595_028004 Ga0500595_028004_38_1855 586
3 3300026023 Ga0207677_10021993 Ga0207677_100219933 592
4 3300025942 Ga0207689_10015236 Ga0207689_100152363 603
5 3300017792 Ga0163161_10018708 Ga0163161_100187085 605
6 3300005339 Ga0070660_100000505 Ga0070660_10000050515 606
7 3300005458 Ga0070681_10001391 Ga0070681_1000139117 606
8 3300005563 Ga0068855_100005909 Ga0068855_1000059098 606
9 3300025912 Ga0207707_10036378 Ga0207707_100363782 606
10 3300025919 Ga0207657_10006496 Ga0207657_100064962 606
11 3300025949 Ga0207667_10020331 Ga0207667_100203315 606
12 3300009098 Ga0105245_10057753 Ga0105245_100577531 607
13 3300050507 nmdc:mga05p37_50080_c1 nmdc:mga05p37_50080_c1_2395_4347 607
14 3300021388 Ga0213875_10002952 Ga0213875_100029527 609
15 3300037853 Ga0436364_0249092 Ga0436364_0249092_5152_7086 609
16 3300006880 Ga0075429_100017662 Ga0075429_1000176625 610
17 3300037471 Ga0395905_0182420 Ga0395905_0182420_69_1910 610
18 3300049569 Ga0501032_0005766 Ga0501032_0005766_1240_3177 610
19 3300049570 Ga0501033_0003537 Ga0501033_0003537_4450_6387 610
20 3300049571 Ga0501034_0109931 Ga0501034_0109931_344_2281 610
21 3300049572 Ga0501036_0000617 Ga0501036_0000617_1833_3770 610
22 3300049573 Ga0501037_0066546 Ga0501037_0066546_153_2090 610
23 3300049574 Ga0501038_0012779 Ga0501038_0012779_187_2124 610
24 3300049575 Ga0501039_0005889 Ga0501039_0005889_7099_9036 610
25 3300049579 Ga0501043_0000556 Ga0501043_0000556_5434_7371 610
26 3300049582 Ga0501048_0016730 Ga0501048_0016730_3270_5207 610
27 3300049583 Ga0501067_0018770 Ga0501067_0018770_1080_3017 610
28 3300049584 Ga0501068_0025959 Ga0501068_0025959_1318_3255 610
29 3300049585 Ga0501069_0000586 Ga0501069_0000586_8932_10869 610
30 3300049589 Ga0501073_0004369 Ga0501073_0004369_1850_3787 610
31 3300049590 Ga0501074_0008268 Ga0501074_0008268_5141_7078 610
32 3300049742 Ga0501080_0019367 Ga0501080_0019367_2240_4177 610
33 3300049744 Ga0501083_0006362 Ga0501083_0006362_449_2386 610
34 3300049822 Ga0501035_0010382 Ga0501035_0010382_5488_7425 610
35 3300049823 Ga0501044_0056220 Ga0501044_0056220_1849_3786 610
36 3300054114 Ga0501084_0029694 Ga0501084_0029694_876_2813 610
37 3300060353 Ga0501082_0016607 Ga0501082_0016607_2246_4183 610
38 3300005347 Ga0070668_100105659 Ga0070668_1001056591 612
39 3300009094 Ga0111539_10005774 Ga0111539_100057744 613
40 3300050511 nmdc:mga08y16_14097_c1 nmdc:mga08y16_14097_c1_5371_7383 613
41 3300049584 Ga0501068_0006757 Ga0501068_0006757_3455_5380 614
42 3300049589 Ga0501073_0001521 Ga0501073_0001521_14076_16001 614
43 3300049742 Ga0501080_0008077 Ga0501080_0008077_1225_3150 614
44 3300049823 Ga0501044_0054725 Ga0501044_0054725_1438_3363 614
45 3300053119 Ga0500595_004902 Ga0500595_004902_816_2696 614
46 3300060353 Ga0501082_0063432 Ga0501082_0063432_1121_3046 614
47 3300046660 Ga0495625_0062377 Ga0495625_0062377_18_1946 615
48 3300047472 Ga0495686_0022636 Ga0495686_0022636_1570_3495 615
49 3300053093 Ga0500651_0003165 Ga0500651_0003165_2943_4826 615
50 3300003215 JGI25153J46596_10000014 JGI25153J46596_10000014225 616
51 3300025297 Ga0209758_1000005 Ga0209758_10000051161 616
52 3300025297 Ga0209758_1013924 Ga0209758_10139243 616
53 3300025298 Ga0209050_1004934 Ga0209050_10049345 616
54 3300025304 Ga0209257_1000504 Ga0209257_100050429 616
55 3300053090 Ga0500646_0003159 Ga0500646_0003159_742_2673 616
56 3300053130 Ga0500642_0000551 Ga0500642_0000551_8760_10691 616
57 3300053151 Ga0500604_0002813 Ga0500604_0002813_2480_4411 616
58 3300009176 Ga0105242_10014378 Ga0105242_100143786 621
59 3300025934 Ga0207686_10000667 Ga0207686_1000066724 621
60 3300032002 Ga0307416_100074126 Ga0307416_1000741262 622
61 3300025901 Ga0207688_10011736 Ga0207688_100117364 624
62 3300009098 Ga0105245_10040149 Ga0105245_100401496 625
63 3300025927 Ga0207687_10075664 Ga0207687_100756641 625
64 3300053087 Ga0500643_007170 Ga0500643_007170_153_2048 625
65 3300005327 Ga0070658_10014254 Ga0070658_100142546 626
66 3300005841 Ga0068863_100013102 Ga0068863_1000131024 626
67 3300026088 Ga0207641_10002688 Ga0207641_1000268811 626
68 3300048905 Ga0496102_0000102 Ga0496102_0000102_68149_70083 626
69 3300048906 Ga0496103_0000090 Ga0496103_0000090_47558_49492 626
70 3300048908 Ga0496105_0003894 Ga0496105_0003894_63_1997 626
71 3300048919 Ga0496116_0000364 Ga0496116_0000364_15559_17493 626
72 3300048920 Ga0496117_0000148 Ga0496117_0000148_111286_113220 626
73 3300048921 Ga0496118_0000114 Ga0496118_0000114_1642_3576 626
74 3300048922 Ga0496119_0000525 Ga0496119_0000525_38558_40492 626
75 3300048924 Ga0496121_0015954 Ga0496121_0015954_3752_5686 626
76 3300048929 Ga0496126_0000355 Ga0496126_0000355_18222_20156 626
77 3300039062 Ga0400483_067404 Ga0400483_067404_3905_6016 627
78 3300005329 Ga0070683_100078967 Ga0070683_1000789672 628
79 3300005338 Ga0068868_100042980 Ga0068868_1000429804 628
80 3300005719 Ga0068861_100036201 Ga0068861_1000362012 628
81 3300005355 Ga0070671_100014053 Ga0070671_1000140534 629
82 3300021384 Ga0213876_10000539 Ga0213876_1000053922 629
83 3300021388 Ga0213875_10003013 Ga0213875_1000301310 629
84 3300025931 Ga0207644_10017013 Ga0207644_100170135 629
85 3300037853 Ga0436364_0164856 Ga0436364_0164856_5443_7377 629
86 3300037853 Ga0436364_0714254 Ga0436364_0714254_10873_12804 629
87 3300039437 Ga0436365_0381713 Ga0436365_0381713_233_2176 629
88 3300047320 Ga0495672_0000436 Ga0495672_0000436_960_2906 629
89 3300049579 Ga0501043_0014329 Ga0501043_0014329_2940_4871 630
90 3300049742 Ga0501080_0106769 Ga0501080_0106769_451_2382 630
91 3300031456 Ga0307513_10011108 Ga0307513_100111084 631
92 iso_pu_bacteria 2915358134 2915360786 631
93 3300044684 Ga0466966_0036889 Ga0466966_0036889_211_2181 632
94 3300005355 Ga0070671_100014074 Ga0070671_1000140745 633
95 3300005843 Ga0068860_100124093 Ga0068860_1001240931 633
96 3300025931 Ga0207644_10025703 Ga0207644_100257032 633
97 3300028379 Ga0268266_10019837 Ga0268266_100198375 633
98 iso_pu_bacteria 2816332139 2816504443 633
99 3300044694 Ga0466963_0019804 Ga0466963_0019804_1942_3876 634
100 iso_pu_bacteria 2899370129 2899375635 634
101 3300005937 Ga0081455_10033948 Ga0081455_100339483 635
102 3300009101 Ga0105247_10001880 Ga0105247_100018802 635
103 3300025900 Ga0207710_10000477 Ga0207710_1000047722 635
104 3300031507 Ga0307509_10086865 Ga0307509_100868652 635
105 3300048919 Ga0496116_0004412 Ga0496116_0004412_2140_4113 635
106 3300005535 Ga0070684_100069504 Ga0070684_1000695041 636
107 3300025912 Ga0207707_10091258 Ga0207707_100912581 636
108 3300030522 Ga0307512_10006928 Ga0307512_100069284 636
109 3300053142 Ga0500577_0002140 Ga0500577_0002140_761_2701 636
110 iso_pu_bacteria 2866552031 2866553557 636
111 3300005985 Ga0081539_10000163 Ga0081539_1000016339 638
112 3300006173 Ga0070716_100064046 Ga0070716_1000640461 638
113 3300006914 Ga0075436_100000014 Ga0075436_10000001483 638
114 3300007076 Ga0075435_100001663 Ga0075435_1000016635 638
115 3300009147 Ga0114129_10140216 Ga0114129_101402162 638
116 3300025906 Ga0207699_10035063 Ga0207699_100350632 638
117 3300025939 Ga0207665_10015173 Ga0207665_100151732 638
118 3300039110 Ga0400487_63844 Ga0400487_63844_2117_4258 638
119 3300050512 nmdc:mga0n895_96119_c1 nmdc:mga0n895_96119_c1_160_2088 638
120 3300050513 nmdc:mga0rr50_1141_c1 nmdc:mga0rr50_1141_c1_4550_6487 638
121 3300050514 nmdc:mga08x19_56_c1 nmdc:mga08x19_56_c1_49270_51207 638
122 iso_pu_bacteria 641228493 641335179 638
123 iso_pu_bacteria 643348555 643391474 638
124 3300031903 Ga0307407_10012056 Ga0307407_100120563 639
125 3300032005 Ga0307411_10018483 Ga0307411_100184833 639
126 3300035724 Ga0373933_0007611 Ga0373933_0007611_826_2778 640
127 3300005985 Ga0081539_10001443 Ga0081539_100014438 641
128 3300006163 Ga0070715_10000016 Ga0070715_1000001660 641
129 3300009098 Ga0105245_10024121 Ga0105245_100241213 641
130 3300025905 Ga0207685_10000044 Ga0207685_1000004421 641
131 3300044673 Ga0453683_0060789 Ga0453683_0060789_167_2104 641
132 3300045051 Ga0451576_0098498 Ga0451576_0098498_524_2461 641
133 3300039093 Ga0400489_58569 Ga0400489_58569_3822_5813 642
134 iso_pu_bacteria 8054472261 8054475348 642
135 3300044658 Ga0466972_0001993 Ga0466972_0001993_3111_5084 643
136 3300044683 Ga0466965_0002190 Ga0466965_0002190_233_2206 643
137 3300044765 Ga0466970_0020178 Ga0466970_0020178_820_2793 643
138 3300047318 Ga0495636_0003810 Ga0495636_0003810_3577_5580 644
139 3300006173 Ga0070716_100000018 Ga0070716_1000000182 645
140 3300021358 Ga0213873_10000073 Ga0213873_1000007312 646
141 3300039437 Ga0436365_1445421 Ga0436365_1445421_2824_4857 646
142 3300039453 Ga0436362_1214233 Ga0436362_1214233_12636_14669 646
143 3300005985 Ga0081539_10003083 Ga0081539_100030833 654
144 3300003203 JGI25406J46586_10000145 JGI25406J46586_1000014512 668
145 3300005985 Ga0081539_10001168 Ga0081539_1000116827 668

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00326

Peptidase_S9

Prolyl oligopeptidase family

483

694

0.97

PF01738

DLH

Dienelactone hydrolase family

514

693

0.79

PF20434

BD-FAE

BD-FAE

460

651

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
3azo-assembly2.cif.gz_B crystal structure of puromycin hydrolase 0.9532 2 649
3azp-assembly1.cif.gz_A crystal structure of puromycin hydrolase s511a mutant 0.952 2 648
7c72-assembly1.cif.gz_A structure of a mycobacterium tuberculosis puromycin-hydrolyzing peptidase 0.9462 1 650
7c72-assembly1.cif.gz_A structure of a mycobacterium tuberculosis puromycin-hydrolyzing peptidase 0.9349 1 650
7c72-assembly2.cif.gz_B structure of a mycobacterium tuberculosis puromycin-hydrolyzing peptidase 0.9348 1 650
ID Description Score Start End Superfamily
af_Q19086_360_640_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.976 376 651 3.40.50.1820
af_Q69Y12_406_672_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9725 373 642 3.40.50.1820
af_Q69Y12_406_672_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9689 373 642 3.40.50.1820
af_Q19086_360_640_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9487 376 651 3.40.50.1820
af_Q54IN4_407_688_3.40.50.1820 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.9452 371 640 3.40.50.1820
ID Description Score Start End GO Terms
AF-A0A1V5R727-F1-model_v4 Esterase 0.9839 353 651 GO:0006508
GO:0008236
AF-A0A7V8E8X4-F1-model_v4 Peptidase S9 prolyl oligopeptidase active site 0.9804 2 651 GO:0006508
GO:0008236
AF-A0A8B6MC80-F1-model_v4 S9 family peptidase 0.9792 1 651 GO:0006508
GO:0008236
AF-H0HR96-F1-model_v4 Peptidase S9 prolyl oligopeptidase active site domain-containing protein 0.9791 451 638 GO:0006508
GO:0008236
AF-A0A2E7PKF6-F1-model_v4 Peptidase 0.9775 17 651 GO:0006508
GO:0008236

Feature Viewer

pLDDT pTM Quality
91.53 0.92 High
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Predicted Structure (AlphaFold2)

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