F196145

General Info

Members Datasets Scaffolds Average Seq Length
145 114 290 575

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2891326441|2891327332
Length 577
Sequence PTSRSTPDPTDGTLGPHARDAAWRRLGSETFDVVVIGGGVVGAGAALDAATRGLRVAVVEARDLASGTSSRSSKLFHGGLRYLEQLEFGLVREALRERELMLTRLAPHLVKPVSFLYPLRNRVWERPYTAAGIFLYDSMGGARSVPGQRHLTRSGALRLMPALRRDALIGGIRYYDAQADDARHTMTVARTAAHYGAVVRTSTQVVDFLHEADRVSGVRVRDVETGELADVRAEVVINCTGVWTDELQKASGSRGRFRVRASKGVHIVVPRDRIVAEDTGLILRTEKSVLFVIPWRNHWIVGTTDTDWNLDLAHPAATRKDIDYILDQVNTVLATPLTHDDIEGVYAGLRPLLAGESEESSKLSREHAVARVAPGLVAIAGGKYTTYRVMAADAVDAAAVDLPGRTRPSTTAQVPLVGADGYHALVNQTDLLATRHGVHPYRIRHLLDRYGSLIHEVLDVDDPDLLKPVDAAPDYLKAEIVYAVTHEGALHLEDVLARRTRISIEYPHRGQDCARQVAELMAPVLDWDAKTIDHEVEVYQARVQAERDSQSLPADEAADATRSAAPEARPYLLEPIT

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
18 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
19 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
20 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
21 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
22 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
25 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
39 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
40 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
41 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
45 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
46 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
47 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
48 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
56 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
57 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
58 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
59 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
60 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
61 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
62 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
63 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
64 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
65 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
66 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
67 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
68 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
69 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
70 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
71 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
82 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
83 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
84 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
85 2582580736 Prauserella sp. Am3 Isolate Unclassified
86 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
87 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
88 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
89 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
90 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
91 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
92 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
93 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
94 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
95 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
96 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
97 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
98 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
99 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
100 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
101 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
102 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
103 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
104 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
105 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
106 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
107 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
108 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
109 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
110 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
111 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
112 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
113 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
114 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.86
Metatranscriptomes 1.38
Isolates 22.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 12.41
Rhizosphere 67.59
Stem 0
Stem Tuber 0.69
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100035246 3300005336 Bacteria 4039
2 Ga0070660_100009776 3300005339 Bacteria 6757
3 Ga0070660_100020148 3300005339 Bacteria 4898
4 Ga0070668_100000752 3300005347 Bacteria 22213
5 Ga0070668_100054949 3300005347 Bacteria 3073
6 Ga0070667_100010194 3300005367 Bacteria 7764
7 Ga0070681_10032289 3300005458 Bacteria 5253
8 Ga0070698_100077652 3300005471 Bacteria 3320
9 Ga0070679_100005306 3300005530 Bacteria 11933
10 Ga0070679_100026529 3300005530 Bacteria 5693
11 Ga0070684_100057147 3300005535 Bacteria 3406
12 Ga0070665_100002236 3300005548 Bacteria 21576
13 Ga0068855_100071181 3300005563 Bacteria 4044
14 Ga0068856_100139507 3300005614 Bacteria 2431
15 Ga0068863_100001796 3300005841 Bacteria 21295
16 Ga0068860_100000154 3300005843 Bacteria 111793
17 Ga0081455_10015727 3300005937 Bacteria 7334
18 Ga0070717_10135294 3300006028 Bacteria 2122
19 Ga0105245_10033886 3300009098 Bacteria 4526
20 Ga0105247_10036836 3300009101 Bacteria 2982
21 Ga0105237_10076472 3300009545 Bacteria 3338
22 Ga0105249_10101662 3300009553 Bacteria 2704
23 Ga0157369_10007534 3300013105 Bacteria 12524
24 Ga0157379_10028064 3300014968 Bacteria 5010
25 Ga0197907_10674043 3300020069 Bacteria 3186
26 Ga0206353_11439356 3300020082 Bacteria 2154
27 Ga0213875_10000488 3300021388 Bacteria 33637
28 Ga0213875_10001371 3300021388 Bacteria 15986
29 Ga0207710_10001948 3300025900 Bacteria 9863
30 Ga0207705_10032273 3300025909 Bacteria 3742
31 Ga0207660_10024804 3300025917 Bacteria 4062
32 Ga0207652_10003906 3300025921 Bacteria 12188
33 Ga0207652_10040734 3300025921 Bacteria 3946
34 Ga0207664_10002529 3300025929 Bacteria 12090
35 Ga0207661_10043506 3300025944 Bacteria 3544
36 Ga0207667_10063225 3300025949 Bacteria 3868
37 Ga0207668_10035452 3300025972 Bacteria 3322
38 Ga0207658_10011627 3300025986 Bacteria 5993
39 Ga0207641_10016104 3300026088 Bacteria 6123
40 Ga0268266_10039721 3300028379 Bacteria 4008
41 Ga0268264_10000210 3300028381 Bacteria 118222
42 Ga0307515_10057567 3300028794 Bacteria 5623
43 Ga0307513_10016011 3300031456 Bacteria 9063
44 Ga0307518_10002434 3300031838 Bacteria 13584
45 Ga0307416_100041922 3300032002 Bacteria 3569
46 Ga0436364_0132601 3300037853 Bacteria 24278
47 Ga0436364_1326662 3300037853 Bacteria 39324
48 Ga0395901_0043329 3300038443 Bacteria 4669
49 Ga0395901_0249427 3300038443 Bacteria 1850
50 Ga0436365_1244779 3300039437 Bacteria 2074
51 Ga0451793_0067692 3300041452 Bacteria 7186
52 Ga0451797_0483195 3300041453 Bacteria 4872
53 Ga0451853_1820041 3300041512 Bacteria 3334
54 Ga0466972_0029025 3300044658 Bacteria 2725
55 Ga0466965_0093399 3300044683 Bacteria 1532
56 Ga0466966_0005028 3300044684 Bacteria 8696
57 Ga0466966_0010217 3300044684 Bacteria 6227
58 Ga0466966_0069574 3300044684 Bacteria 2208
59 Ga0466961_0003205 3300044693 Bacteria 10183
60 Ga0466961_0008300 3300044693 Bacteria 6614
61 Ga0466961_0029380 3300044693 Bacteria 3534
62 Ga0466961_0037298 3300044693 Bacteria 3118
63 Ga0466963_0002872 3300044694 Bacteria 9728
64 Ga0466963_0009133 3300044694 Bacteria 5962
65 Ga0466963_0028501 3300044694 Bacteria 3586
66 Ga0466963_0031532 3300044694 Bacteria 3427
67 Ga0466971_0002068 3300044719 Bacteria 8506
68 Ga0466958_0001896 3300045836 Bacteria 10230
69 Ga0466958_0011571 3300045836 Bacteria 4971
70 Ga0466958_0022948 3300045836 Bacteria 3659
71 Ga0466958_0038418 3300045836 Bacteria 2872
72 Ga0466958_0076650 3300045836 Bacteria 2053
73 Ga0466967_0021596 3300045976 Bacteria 5233
74 Ga0466967_0023837 3300045976 Bacteria 5021
75 Ga0466967_0024613 3300045976 Bacteria 4953
76 Ga0466967_0035825 3300045976 Bacteria 4228
77 Ga0466967_0036027 3300045976 Bacteria 4220
78 Ga0495608_0019838 3300046511 Bacteria 4624
79 Ga0495640_0064958 3300046533 Bacteria 2466
80 Ga0496102_0000023 3300048905 Bacteria 237015
81 Ga0496102_0000697 3300048905 Bacteria 33433
82 Ga0496103_0003724 3300048906 Bacteria 9270
83 Ga0496103_0005809 3300048906 Bacteria 7371
84 Ga0496104_0003155 3300048907 Bacteria 14192
85 Ga0496105_0020002 3300048908 Bacteria 5403
86 Ga0496108_0011859 3300048911 Bacteria 7090
87 Ga0496108_0127286 3300048911 Bacteria 2188
88 Ga0496109_0004982 3300048912 Bacteria 11090
89 Ga0496110_0000029 3300048913 Bacteria 69418
90 Ga0496111_0001582 3300048914 Bacteria 13150
91 Ga0496113_0002367 3300048916 Bacteria 10927
92 Ga0496114_0000330 3300048917 Bacteria 34389
93 Ga0496114_0021274 3300048917 Bacteria 5275
94 Ga0496114_0071886 3300048917 Bacteria 2908
95 Ga0496115_0031872 3300048918 Bacteria 4156
96 Ga0496118_0013370 3300048921 Bacteria 7770
97 Ga0496119_0000104 3300048922 Bacteria 121325
98 Ga0496119_0016194 3300048922 Bacteria 5695
99 Ga0496120_0003035 3300048923 Bacteria 15854
100 Ga0501031_0037429 3300049568 Bacteria 3165
101 Ga0501032_0007588 3300049569 Bacteria 7918
102 Ga0501034_0026964 3300049571 Bacteria 5845
103 Ga0501038_0001510 3300049574 Bacteria 21399
104 Ga0501043_0007620 3300049579 Bacteria 8581
105 Ga0501047_0072604 3300049581 Bacteria 3312
106 Ga0501047_0137237 3300049581 Bacteria 2326
107 Ga0501048_0000534 3300049582 Bacteria 26788
108 Ga0501070_0019075 3300049586 Bacteria 5753
109 Ga0501035_0019514 3300049822 Bacteria 6232
110 Ga0501044_0013337 3300049823 Bacteria 8895
111 Ga0501044_0036711 3300049823 Bacteria 5125
112 Ga0466962_0001830 3300061719 Bacteria 10009
113 2891327332 2891326441 Bacteria 6439512
114 2515855034 2515154155 Bacteria 7985436
115 2558912324 2558860112 Bacteria 9931328
116 2583152397 2582580736 Bacteria 5325865
117 2586064276 2585427649 Bacteria 9053857
118 2676475289 2675903058 Bacteria 6822861
119 2753074276 2751185734 Bacteria 8863695
120 2776375999 2775506925 Bacteria 7237746
121 2791915901 2791354901 Bacteria 8322202
122 2795785594 2795385470 Bacteria 8317180
123 2809586474 2808606522 Bacteria 9488490
124 2827629779 2827628540 Bacteria 6858585
125 2837270262 2837268691 Bacteria 7850704
126 2863070643 2863067949 Bacteria 8541735
127 2866555371 2866552031 Bacteria 5824618
128 2866618843 2866612099 Bacteria 7543886
129 2868092339 2868088558 Bacteria 7609351
130 2870727329 2870721527 Bacteria 9689237
131 2870788782 2870782633 Bacteria 9624083
132 2899366770 2899359706 Bacteria 10940472
133 2899375120 2899370129 Bacteria 6781179
134 2904765995 2904765812 Bacteria 5369154
135 2904773515 2904770941 Bacteria 5580202
136 2908812240 2908811453 Bacteria 5478616
137 2915775861 2915768154 Bacteria 8424322
138 2917737599 2917736166 Bacteria 9690793
139 2919424114 2919420072 Bacteria 5390363
140 2919437791 2919432681 Bacteria 5390474
141 2956941158 2956939328 Bacteria 3474458
142 3001120847 3001119090 Bacteria 3449530
143 8003323309 8003314358 Bacteria 10575343
144 8047719828 8047710418 Bacteria 11023148
145 8056208916 8056207758 Bacteria 8639239
146 Ga0070680_100035246
147 Ga0070660_100009776
148 Ga0070660_100020148
149 Ga0070668_100000752
150 Ga0070668_100054949
151 Ga0070667_100010194
152 Ga0070681_10032289
153 Ga0070698_100077652
154 Ga0070679_100005306
155 Ga0070679_100026529
156 Ga0070684_100057147
157 Ga0070665_100002236
158 Ga0068855_100071181
159 Ga0068856_100139507
160 Ga0068863_100001796
161 Ga0068860_100000154
162 Ga0081455_10015727
163 Ga0070717_10135294
164 Ga0105245_10033886
165 Ga0105247_10036836
166 Ga0105237_10076472
167 Ga0105249_10101662
168 Ga0157369_10007534
169 Ga0157379_10028064
170 Ga0197907_10674043
171 Ga0206353_11439356
172 Ga0213875_10000488
173 Ga0213875_10001371
174 Ga0207710_10001948
175 Ga0207705_10032273
176 Ga0207660_10024804
177 Ga0207652_10003906
178 Ga0207652_10040734
179 Ga0207664_10002529
180 Ga0207661_10043506
181 Ga0207667_10063225
182 Ga0207668_10035452
183 Ga0207658_10011627
184 Ga0207641_10016104
185 Ga0268266_10039721
186 Ga0268264_10000210
187 Ga0307515_10057567
188 Ga0307513_10016011
189 Ga0307518_10002434
190 Ga0307416_100041922
191 Ga0436364_0132601
192 Ga0436364_1326662
193 Ga0395901_0043329
194 Ga0395901_0249427
195 Ga0436365_1244779
196 Ga0451793_0067692
197 Ga0451797_0483195
198 Ga0451853_1820041
199 Ga0466972_0029025
200 Ga0466965_0093399
201 Ga0466966_0005028
202 Ga0466966_0010217
203 Ga0466966_0069574
204 Ga0466961_0003205
205 Ga0466961_0008300
206 Ga0466961_0029380
207 Ga0466961_0037298
208 Ga0466963_0002872
209 Ga0466963_0009133
210 Ga0466963_0028501
211 Ga0466963_0031532
212 Ga0466971_0002068
213 Ga0466958_0001896
214 Ga0466958_0011571
215 Ga0466958_0022948
216 Ga0466958_0038418
217 Ga0466958_0076650
218 Ga0466967_0021596
219 Ga0466967_0023837
220 Ga0466967_0024613
221 Ga0466967_0035825
222 Ga0466967_0036027
223 Ga0495608_0019838
224 Ga0495640_0064958
225 Ga0496102_0000023
226 Ga0496102_0000697
227 Ga0496103_0003724
228 Ga0496103_0005809
229 Ga0496104_0003155
230 Ga0496105_0020002
231 Ga0496108_0011859
232 Ga0496108_0127286
233 Ga0496109_0004982
234 Ga0496110_0000029
235 Ga0496111_0001582
236 Ga0496113_0002367
237 Ga0496114_0000330
238 Ga0496114_0021274
239 Ga0496114_0071886
240 Ga0496115_0031872
241 Ga0496118_0013370
242 Ga0496119_0000104
243 Ga0496119_0016194
244 Ga0496120_0003035
245 Ga0501031_0037429
246 Ga0501032_0007588
247 Ga0501034_0026964
248 Ga0501038_0001510
249 Ga0501043_0007620
250 Ga0501047_0072604
251 Ga0501047_0137237
252 Ga0501048_0000534
253 Ga0501070_0019075
254 Ga0501035_0019514
255 Ga0501044_0013337
256 Ga0501044_0036711
257 Ga0466962_0001830
258 2891327332
259 2515855034
260 2558912324
261 2583152397
262 2586064276
263 2676475289
264 2753074276
265 2776375999
266 2791915901
267 2795785594
268 2809586474
269 2827629779
270 2837270262
271 2863070643
272 2866555371
273 2866618843
274 2868092339
275 2870727329
276 2870788782
277 2899366770
278 2899375120
279 2904765995
280 2904773515
281 2908812240
282 2915775861
283 2917737599
284 2919424114
285 2919437791
286 2956941158
287 3001120847
288 8003323309
289 8047719828
290 8056208916

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

409

532

0.95

PF00890

FAD_binding_2

FAD binding domain

32

86

0.94

PF12831

FAD_oxidored

FAD dependent oxidoreductase

32

124

0.87

PF01494

FAD_binding_3

FAD binding domain

30

345

0.79

PF01266

DAO

FAD dependent oxidoreductase

32

388

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bke-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodisulfide reductase core and mobile arm in conformational state 2, composite structure) 0.9868 25 55
7bkd-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodislfide reductase core and mobile arm in conformational state 1, composite structure) 0.9835 25 55
4j0f-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.9783 25 54
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.9547 25 54
3ado-assembly1.cif.gz_A crystal structure of the rabbit l-gulonate 3-dehydrogenase 0.9492 25 55
ID Description Score Start End Superfamily
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9747 26 54 3.50.50.60
3k30B02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.974 25 55 3.40.50.720
af_P0A6S7_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9682 23 54 3.40.50.720
af_A7YT47_359_542_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9681 25 54 3.40.50.720
af_Q4CWB6_396_583_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9674 25 55 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A6V8KAD6-F1-model_v4 Alpha-glycerophosphate oxidase C-terminal domain-containing protein 0.9705 382 560 GO:0004368
GO:0046168
AF-A0A1X1WZ23-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.9668 8 567 GO:0004368
GO:0009331
GO:0046168
AF-A0A1V3WKH3-F1-model_v4 Glycerol-3-phosphate dehydrogenase 2 domain protein (EC 1.1.5.3) 0.9657 437 570 GO:0004368
GO:0046168
AF-A0A6V8KAD6-F1-model_v4 Alpha-glycerophosphate oxidase C-terminal domain-containing protein 0.9652 382 560 GO:0004368
GO:0046168
AF-A0A853CV70-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 0.9642 1 561 GO:0004368
GO:0009331
GO:0046168

Map