F194641

General Info

Members Datasets Scaffolds Average Seq Length
145 116 290 432

Family's Representative Sequence

Representative Sequence 3300013100|Ga0157373_10030781|Ga0157373_100307813
Length 461
Sequence VSFGSNFIPYVELGQITSNAAKGIFVLLKVNMQTTNPVKANARFAFILVTSLFFLWGFSNNLNPILIPHLKKSFTLTTTQSTLIDSAVYIAYFLMALPAGYVMKRFGYKIGIIAGLLLFSIGAYLFIPAANTQSYTFFLFALFVIACGLGFLETAANPYAAALGPHETSIQRLNLAQSFNGLAAALAPLIGGKIILTQNYSEAQLNAMTADAKKFALASEASSVKTPYFILGTILLIIAVAFALTKLPKIQHKETGRKKSQNIVHAFKHRHLTWSVIAQFFYVGAQVCVMSLFVLYAPKSADITEEKATVMLAACGFAFLVGRFAGTFLMKFIKPNRLLAIYAVINILLCIVAIAAHGMITGICFFMSIMFPTIFALGIKNLGGDTEYGSSLLIMSIVGGAILPRVFGIISDSTGNIQLGYIVPFICFVVIAYFGWKGYKTIDVANLEFEKEPSLAATISH

Samples

Sample ID Description Type Environment
1 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
31 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
32 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
48 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
74 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
78 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
79 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
80 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
81 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
89 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
90 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
91 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
97 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
98 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
99 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
106 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
107 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
108 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
109 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
112 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
113 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
114 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
115 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
116 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.55
Metatranscriptomes 0.69
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.76
Nodule 0
Rhizoplane 0.69
Rhizosphere 91.72
Stem 0
Stem Tuber 0
Unclassified 6.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157373_10030781 3300013100 Bacteria 3861
2 JGI24740J21852_10010530 3300001979 Bacteria 3555
3 rootH2_10032558 3300003320 Bacteria 26006
4 rootH2_10045503 3300003320 Bacteria 9003
5 rootH1_10160801 3300003323 Bacteria 4715
6 Ga0055531_10000067 3300003794 Bacteria 114289
7 Ga0070683_100090067 3300005329 Unclassified 2880
8 Ga0070683_100197898 3300005329 Bacteria 1908
9 Ga0070670_100047099 3300005331 Bacteria 3709
10 Ga0068868_100016783 3300005338 Bacteria 5445
11 Ga0068868_100132635 3300005338 Bacteria 2040
12 Ga0070675_100157594 3300005354 Bacteria 1950
13 Ga0070675_100182776 3300005354 Bacteria 1813
14 Ga0070673_100010951 3300005364 Bacteria 6169
15 Ga0070667_100111777 3300005367 Bacteria 2370
16 Ga0070709_10033086 3300005434 Bacteria 3123
17 Ga0070714_100000258 3300005435 Bacteria 41358
18 Ga0070711_100011113 3300005439 Bacteria 5586
19 Ga0070708_100000380 3300005445 Bacteria 33505
20 Ga0070663_100005013 3300005455 Bacteria 7821
21 Ga0070678_100003639 3300005456 Bacteria 8601
22 Ga0070662_100000145 3300005457 Bacteria 40435
23 Ga0068867_100009545 3300005459 Bacteria 6840
24 Ga0070706_100000402 3300005467 Bacteria 52276
25 Ga0070707_100005992 3300005468 Bacteria 11339
26 Ga0070698_100002039 3300005471 Bacteria 22443
27 Ga0070684_100019229 3300005535 Bacteria 5647
28 Ga0070684_100057375 3300005535 Bacteria 3400
29 Ga0070664_100009835 3300005564 Bacteria 7750
30 Ga0068856_100007449 3300005614 Bacteria 10681
31 Ga0068852_100000735 3300005616 Bacteria 21499
32 Ga0097621_100000417 3300006237 Bacteria 29675
33 Ga0097621_100049927 3300006237 Bacteria 3401
34 Ga0068871_100000037 3300006358 Bacteria 70231
35 Ga0068871_100044773 3300006358 Bacteria 3560
36 Ga0068865_100000067 3300006881 Bacteria 54449
37 Ga0068865_100055761 3300006881 Bacteria 2751
38 Ga0099794_10003714 3300007265 Bacteria 5875
39 Ga0099794_10021301 3300007265 Unclassified 2944
40 Ga0099795_10011484 3300007788 Bacteria 2650
41 Ga0105240_10094089 3300009093 Bacteria 3656
42 Ga0105245_10172885 3300009098 Bacteria 2058
43 Ga0105241_10002828 3300009174 Bacteria 12965
44 Ga0105242_10011442 3300009176 Bacteria 6823
45 Ga0105242_10113440 3300009176 Unclassified 2314
46 Ga0105237_10001623 3300009545 Bacteria 29201
47 Ga0105238_10124307 3300009551 Bacteria 2559
48 Ga0105239_10000004 3300010375 Bacteria 532483
49 Ga0105239_10009494 3300010375 Bacteria 10957
50 Ga0105239_10057695 3300010375 Bacteria 4258
51 Ga0157373_10000327 3300013100 Bacteria 38493
52 Ga0157370_10085599 3300013104 Unclassified 2962
53 Ga0157369_10000500 3300013105 Bacteria 51847
54 Ga0157374_10038727 3300013296 Bacteria 4383
55 Ga0157378_10016322 3300013297 Bacteria 6504
56 Ga0157372_10000001 3300013307 Bacteria 791349
57 Ga0157372_10000980 3300013307 Bacteria 31160
58 Ga0157372_10083815 3300013307 Bacteria 3611
59 Ga0157372_10272446 3300013307 Bacteria 1967
60 Ga0163163_10008938 3300014325 Bacteria 8923
61 Ga0182008_10081018 3300014497 Bacteria 1597
62 Ga0157376_10012691 3300014969 Bacteria 6265
63 Ga0157376_10016843 3300014969 Bacteria 5560
64 Ga0157376_10018216 3300014969 Bacteria 5377
65 Ga0209026_1008532 3300025250 Bacteria 2126
66 Ga0209257_1000005 3300025304 Bacteria 1592528
67 Ga0207647_10000302 3300025904 Bacteria 40592
68 Ga0207645_10000067 3300025907 Bacteria 75648
69 Ga0207684_10000004 3300025910 Bacteria 755956
70 Ga0207654_10001422 3300025911 Bacteria 12701
71 Ga0207695_10001921 3300025913 Bacteria 32318
72 Ga0207695_10079273 3300025913 Bacteria 3329
73 Ga0207671_10005528 3300025914 Bacteria 11618
74 Ga0207671_10006718 3300025914 Bacteria 10188
75 Ga0207663_10007426 3300025916 Bacteria 5682
76 Ga0207650_10023888 3300025925 Bacteria 4340
77 Ga0207650_10072796 3300025925 Unclassified 2587
78 Ga0207664_10000684 3300025929 Bacteria 23233
79 Ga0207706_10000538 3300025933 Bacteria 40240
80 Ga0207704_10000056 3300025938 Bacteria 78848
81 Ga0207704_10039431 3300025938 Bacteria 2750
82 Ga0207689_10049458 3300025942 Bacteria 3468
83 Ga0207661_10164936 3300025944 Bacteria 1924
84 Ga0207677_10010010 3300026023 Bacteria 5352
85 Ga0207678_10005756 3300026067 Bacteria 11053
86 Ga0207702_10238063 3300026078 Bacteria 1704
87 Ga0207648_10000738 3300026089 Bacteria 36673
88 Ga0207648_10107839 3300026089 Bacteria 2444
89 Ga0207683_10011911 3300026121 Bacteria 7421
90 Ga0207698_10016058 3300026142 Bacteria 5037
91 Ga0265334_10008109 3300028573 Bacteria 4476
92 Ga0265338_10012088 3300028800 Bacteria 9870
93 Ga0265338_10060460 3300028800 Bacteria 3329
94 Ga0265760_10021317 3300031090 Bacteria 1875
95 Ga0307509_10127498 3300031507 Bacteria 2508
96 Ga0307408_100000850 3300031548 Bacteria 24092
97 Ga0307408_100003533 3300031548 Bacteria 10640
98 Ga0265313_10005381 3300031595 Bacteria 9445
99 Ga0307405_10012612 3300031731 Bacteria 4484
100 Ga0307412_10006352 3300031911 Bacteria 6677
101 Ga0307414_10124334 3300032004 Unclassified 1990
102 Ga0316212_1004678 3300033547 Bacteria 1985
103 Ga0373934_0050110 3300035086 Unclassified 1654
104 Ga0373953_0000999 3300035117 Bacteria 7967
105 Ga0373954_0000283 3300035118 Bacteria 18420
106 Ga0373957_0022441 3300035120 Bacteria 2249
107 Ga0373943_0000493 3300035170 Bacteria 16847
108 Ga0373946_0004414 3300035171 Bacteria 5035
109 Ga0373955_0004030 3300035172 Bacteria 6482
110 Ga0373955_0062067 3300035172 Bacteria 2066
111 Ga0373935_0012544 3300035692 Bacteria 5098
112 Ga0373927_0001171 3300035695 Bacteria 19856
113 Ga0373937_0013216 3300036401 Bacteria 7270
114 Ga0373937_0015334 3300036401 Bacteria 6777
115 Ga0373925_0001178 3300037068 Bacteria 23117
116 Ga0395899_0000001 3300037312 Bacteria 1750322
117 Ga0395899_0000150 3300037312 Bacteria 105946
118 Ga0395899_0000474 3300037312 Bacteria 45411
119 Ga0395900_0000413 3300037418 Bacteria 61555
120 Ga0395898_0002918 3300037466 Bacteria 19458
121 Ga0395905_0000188 3300037471 Bacteria 98070
122 Ga0395901_0002175 3300038443 Bacteria 20011
123 Ga0466966_0032681 3300044684 Bacteria 3370
124 Ga0495664_0010575 3300046477 Bacteria 5179
125 Ga0495658_0032008 3300046683 Bacteria 2869
126 Ga0495686_0183755 3300047472 Bacteria 1210
127 Ga0496115_0046659 3300048918 Bacteria 3464
128 Ga0501290_003303 3300049513 Unclassified 2048
129 Ga0501032_0026315 3300049569 Bacteria 4003
130 Ga0501036_0025104 3300049572 Bacteria 5026
131 Ga0501038_0053759 3300049574 Bacteria 3465
132 Ga0501039_0057139 3300049575 Bacteria 3022
133 Ga0501043_0036627 3300049579 Bacteria 3860
134 Ga0501223_002553 3300049663 Bacteria 4027
135 Ga0501240_000408 3300049673 Bacteria 3457
136 Ga0501242_000023 3300049674 Bacteria 10811
137 Ga0501259_000434 3300049688 Bacteria 6618
138 Ga0501225_0007365 3300049705 Unclassified 3189
139 Ga0501035_0322750 3300049822 Bacteria 1297
140 Ga0500562_000047 3300053108 Bacteria 62430
141 Ga0500622_0001690 3300053156 Bacteria 17179
142 2722730130 2721755487 Bacteria 6357185
143 2904782905 2904780799 Bacteria 5840761
144 2919179921 2919177583 Bacteria 5641607
145 2929155298 2929154850 Bacteria 6753285
146 Ga0157373_10030781
147 JGI24740J21852_10010530
148 rootH2_10032558
149 rootH2_10045503
150 rootH1_10160801
151 Ga0055531_10000067
152 Ga0070683_100090067
153 Ga0070683_100197898
154 Ga0070670_100047099
155 Ga0068868_100016783
156 Ga0068868_100132635
157 Ga0070675_100157594
158 Ga0070675_100182776
159 Ga0070673_100010951
160 Ga0070667_100111777
161 Ga0070709_10033086
162 Ga0070714_100000258
163 Ga0070711_100011113
164 Ga0070708_100000380
165 Ga0070663_100005013
166 Ga0070678_100003639
167 Ga0070662_100000145
168 Ga0068867_100009545
169 Ga0070706_100000402
170 Ga0070707_100005992
171 Ga0070698_100002039
172 Ga0070684_100019229
173 Ga0070684_100057375
174 Ga0070664_100009835
175 Ga0068856_100007449
176 Ga0068852_100000735
177 Ga0097621_100000417
178 Ga0097621_100049927
179 Ga0068871_100000037
180 Ga0068871_100044773
181 Ga0068865_100000067
182 Ga0068865_100055761
183 Ga0099794_10003714
184 Ga0099794_10021301
185 Ga0099795_10011484
186 Ga0105240_10094089
187 Ga0105245_10172885
188 Ga0105241_10002828
189 Ga0105242_10011442
190 Ga0105242_10113440
191 Ga0105237_10001623
192 Ga0105238_10124307
193 Ga0105239_10000004
194 Ga0105239_10009494
195 Ga0105239_10057695
196 Ga0157373_10000327
197 Ga0157370_10085599
198 Ga0157369_10000500
199 Ga0157374_10038727
200 Ga0157378_10016322
201 Ga0157372_10000001
202 Ga0157372_10000980
203 Ga0157372_10083815
204 Ga0157372_10272446
205 Ga0163163_10008938
206 Ga0182008_10081018
207 Ga0157376_10012691
208 Ga0157376_10016843
209 Ga0157376_10018216
210 Ga0209026_1008532
211 Ga0209257_1000005
212 Ga0207647_10000302
213 Ga0207645_10000067
214 Ga0207684_10000004
215 Ga0207654_10001422
216 Ga0207695_10001921
217 Ga0207695_10079273
218 Ga0207671_10005528
219 Ga0207671_10006718
220 Ga0207663_10007426
221 Ga0207650_10023888
222 Ga0207650_10072796
223 Ga0207664_10000684
224 Ga0207706_10000538
225 Ga0207704_10000056
226 Ga0207704_10039431
227 Ga0207689_10049458
228 Ga0207661_10164936
229 Ga0207677_10010010
230 Ga0207678_10005756
231 Ga0207702_10238063
232 Ga0207648_10000738
233 Ga0207648_10107839
234 Ga0207683_10011911
235 Ga0207698_10016058
236 Ga0265334_10008109
237 Ga0265338_10012088
238 Ga0265338_10060460
239 Ga0265760_10021317
240 Ga0307509_10127498
241 Ga0307408_100000850
242 Ga0307408_100003533
243 Ga0265313_10005381
244 Ga0307405_10012612
245 Ga0307412_10006352
246 Ga0307414_10124334
247 Ga0316212_1004678
248 Ga0373934_0050110
249 Ga0373953_0000999
250 Ga0373954_0000283
251 Ga0373957_0022441
252 Ga0373943_0000493
253 Ga0373946_0004414
254 Ga0373955_0004030
255 Ga0373955_0062067
256 Ga0373935_0012544
257 Ga0373927_0001171
258 Ga0373937_0013216
259 Ga0373937_0015334
260 Ga0373925_0001178
261 Ga0395899_0000001
262 Ga0395899_0000150
263 Ga0395899_0000474
264 Ga0395900_0000413
265 Ga0395898_0002918
266 Ga0395905_0000188
267 Ga0395901_0002175
268 Ga0466966_0032681
269 Ga0495664_0010575
270 Ga0495658_0032008
271 Ga0495686_0183755
272 Ga0496115_0046659
273 Ga0501290_003303
274 Ga0501032_0026315
275 Ga0501036_0025104
276 Ga0501038_0053759
277 Ga0501039_0057139
278 Ga0501043_0036627
279 Ga0501223_002553
280 Ga0501240_000408
281 Ga0501242_000023
282 Ga0501259_000434
283 Ga0501225_0007365
284 Ga0501035_0322750
285 Ga0500562_000047
286 Ga0500622_0001690
287 2722730130
288 2904782905
289 2919179921
290 2929155298

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

46

210

0.83

PF07690

MFS_1

Major Facilitator Superfamily

48

385

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.8339 16 430
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.8279 16 430
6kkk-assembly3.cif.gz_C crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation (h115a mutant) 0.8013 17 415
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.8002 54 417
8sc1-assembly1.cif.gz_A human oct1 (apo) in inward-open conformation 0.7965 55 417
ID Description Score Start End Superfamily
3o7qA02 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9572 235 421 1.20.1250.20
3o7qA02 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9282 235 421 1.20.1250.20
af_P9WJW9_258_425_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8926 16 171 1.20.1250.20
af_P76198_215_409_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8778 248 425 1.20.1250.20
af_P17583_194_375_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8769 247 418 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A4Q3RGE4-F1-model_v4 MFS transporter 0.9443 15 171 GO:0005886
GO:0022857
AF-A0A4Q3RGE4-F1-model_v4 MFS transporter 0.9055 15 171 GO:0005886
GO:0022857
AF-A0A5C8WDZ4-F1-model_v4 Sugar MFS transporter 0.9049 17 161 GO:0005886
GO:0022857
AF-A0A354GF75-F1-model_v4 Glucose/galactose MFS transporter 0.8997 10 198 GO:0005886
GO:0022857
AF-A0A2E9XNC2-F1-model_v4 MFS transporter 0.8798 17 217 GO:0005886
GO:0046943

Map