F193212

General Info

Members Datasets Scaffolds Average Seq Length
144 118 288 349

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2832004796|2832008733
Length 377
Sequence RIRATVDDRPGYLSVLTASLALRGVNILSVQVHTTEGGAVDDFLVDAPDTLDEAELIAAVERGRGRDCWVARSEARGLADQPTRVLGLAARLVYDPDATGEVLRTLLGADEVTWRPVPGAARSGIDGVTMLLADPNGGSYLLHRVAPSFTPAEYARAQALLEVGAAAARRASELVTVVLPDGAELTVRPAVADDLAAVVELHERCSARTRQRRYLAGGALPSPARLRRLLEPARGVTLIAATTGSDGAAESVVAMAHLLAEGDEAELALLVRDDWQRRGLGSTLLRRLTRQAESAGYAAMVLHVQADNTPMLRTLRRLARPTRVEHDAGLMTLTVPLTAGTATAADEPPADPGADGAHRLPSNPPIPAQHAGSPTTC

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
32 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
47 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
50 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
51 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
52 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
53 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
60 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
61 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
62 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
69 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
72 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
73 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
74 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
75 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
78 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
79 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
80 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
81 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
82 2501939600 Micromonospora sp. L5 Isolate Unclassified
83 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
84 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
85 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
86 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
87 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
88 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
89 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
90 2855683550 Micromonospora sp. RP3T Isolate Unclassified
91 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
92 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
93 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
94 2858882152 Micromonospora noduli MED15 Isolate Nodule
95 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
96 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
97 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
98 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
99 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
100 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
101 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
102 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
103 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
104 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
105 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
106 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
107 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
108 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
109 2902582711 Micromonospora sp. AP08 Isolate Unclassified
110 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
111 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
112 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
113 649633069 Micromonospora sp. L5 Isolate Unclassified
114 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
115 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
116 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
117 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
118 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 73.61
Metatranscriptomes 0
Isolates 26.39

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 3.47
Rhizoplane 2.08
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 1.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10015534 3300003203 Bacteria 3207
2 rootH2_10099973 3300003320 Bacteria 1661
3 Ga0070658_10160567 3300005327 Bacteria 1885
4 Ga0070683_100161136 3300005329 Bacteria 2128
5 Ga0070680_100430686 3300005336 Bacteria 1126
6 Ga0070682_100074532 3300005337 Bacteria 2180
7 Ga0070668_100000476 3300005347 Bacteria 26561
8 Ga0070668_100210075 3300005347 Bacteria 1601
9 Ga0070674_100287323 3300005356 Bacteria 1306
10 Ga0070667_100016363 3300005367 Bacteria 6135
11 Ga0070713_100327514 3300005436 Bacteria 1416
12 Ga0070679_100140996 3300005530 Bacteria 2390
13 Ga0070684_100208424 3300005535 Bacteria 1781
14 Ga0070664_100173131 3300005564 Bacteria 1915
15 Ga0068859_100026920 3300005617 Bacteria 5768
16 Ga0068859_100230974 3300005617 Bacteria 1938
17 Ga0068863_100077955 3300005841 Bacteria 3137
18 Ga0068858_100043539 3300005842 Bacteria 4162
19 Ga0068860_100107628 3300005843 Bacteria 2664
20 Ga0068862_100160723 3300005844 Bacteria 2005
21 Ga0081540_1024132 3300005983 Bacteria 3536
22 Ga0081539_10000253 3300005985 Bacteria 124747
23 Ga0081539_10001076 3300005985 Bacteria 49708
24 Ga0081539_10001422 3300005985 Bacteria 41133
25 Ga0081539_10011784 3300005985 Bacteria 6848
26 Ga0081539_10013998 3300005985 Bacteria 5979
27 Ga0081539_10020399 3300005985 Bacteria 4481
28 Ga0075428_100023722 3300006844 Bacteria 6790
29 Ga0075428_100122572 3300006844 Bacteria 2830
30 Ga0075428_100399422 3300006844 Bacteria 1473
31 Ga0075430_100076488 3300006846 Bacteria 2806
32 Ga0075431_100093499 3300006847 Bacteria 3103
33 Ga0075429_100051369 3300006880 Bacteria 3587
34 Ga0097620_100026920 3300006931 Bacteria 5768
35 Ga0097620_100230983 3300006931 Bacteria 1938
36 Ga0114129_10000391 3300009147 Bacteria 51146
37 Ga0114129_10014942 3300009147 Bacteria 11062
38 Ga0114129_10023347 3300009147 Bacteria 8772
39 Ga0105248_10355658 3300009177 Bacteria 1649
40 Ga0157369_10071965 3300013105 Bacteria 3711
41 Ga0157375_10469466 3300013308 Bacteria 1423
42 Ga0163163_10438781 3300014325 Unclassified 1365
43 Ga0157376_10209662 3300014969 Bacteria 1798
44 Ga0207705_10049136 3300025909 Bacteria 3036
45 Ga0207652_10119971 3300025921 Bacteria 2339
46 Ga0207700_10132586 3300025928 Bacteria 2037
47 Ga0207689_10149681 3300025942 Bacteria 1924
48 Ga0207661_10023347 3300025944 Bacteria 4672
49 Ga0207668_10147471 3300025972 Bacteria 1817
50 Ga0207703_10136266 3300026035 Bacteria 2125
51 Ga0207678_10145486 3300026067 Bacteria 2023
52 Ga0207641_10080931 3300026088 Bacteria 2819
53 Ga0207674_10121507 3300026116 Bacteria 2579
54 Ga0268265_10037774 3300028380 Bacteria 3546
55 Ga0268264_10062974 3300028381 Bacteria 3116
56 Ga0307517_10230837 3300028786 Bacteria 1111
57 Ga0307515_10000146 3300028794 Bacteria 170674
58 Ga0307515_10003313 3300028794 Bacteria 34044
59 Ga0307515_10025553 3300028794 Bacteria 10211
60 Ga0307515_10079459 3300028794 Bacteria 4296
61 Ga0307512_10007243 3300030522 Bacteria 11036
62 Ga0307513_10011654 3300031456 Bacteria 10911
63 Ga0307408_100024404 3300031548 Bacteria 4129
64 Ga0307508_10003465 3300031616 Bacteria 15950
65 Ga0307508_10053006 3300031616 Bacteria 3602
66 Ga0307516_10000787 3300031730 Bacteria 43326
67 Ga0307516_10020306 3300031730 Bacteria 6862
68 Ga0307516_10078549 3300031730 Bacteria 3146
69 Ga0307405_10034563 3300031731 Bacteria 3009
70 Ga0307410_10261949 3300031852 Bacteria 1349
71 Ga0326468_10000593 3300031889 Bacteria 3751
72 Ga0307406_10056780 3300031901 Bacteria 2509
73 Ga0307407_10172749 3300031903 Bacteria 1425
74 Ga0307409_100070634 3300031995 Bacteria 2772
75 Ga0307416_100103472 3300032002 Bacteria 2486
76 Ga0307416_100105119 3300032002 Bacteria 2470
77 Ga0307415_100006577 3300032126 Bacteria 6283
78 Ga0307415_100091700 3300032126 Bacteria 2201
79 Ga0307415_100203279 3300032126 Bacteria 1574
80 Ga0307415_100323450 3300032126 Bacteria 1287
81 Ga0373940_0000863 3300035088 Bacteria 5091
82 Ga0373951_0000432 3300035091 Bacteria 12308
83 Ga0373941_0041819 3300035115 Bacteria 1420
84 Ga0373942_0006771 3300035207 Bacteria 2647
85 Ga0373935_0016223 3300035692 Bacteria 4508
86 Ga0373937_0110730 3300036401 Bacteria 2554
87 Ga0395900_0094260 3300037418 Bacteria 3075
88 Ga0395898_0072324 3300037466 Bacteria 3331
89 Ga0395901_0044170 3300038443 Bacteria 4622
90 Ga0495606_0004164 3300046507 Bacteria 14659
91 Ga0495668_0000529 3300046616 Bacteria 47516
92 Ga0495625_0002762 3300046660 Bacteria 18546
93 Ga0495602_0228198 3300048088 Unclassified 1401
94 Ga0495626_0001505 3300048091 Bacteria 18386
95 Ga0496108_0000085 3300048911 Bacteria 101144
96 Ga0496112_0268492 3300048915 Bacteria 1654
97 Ga0496112_0327732 3300048915 Bacteria 1475
98 Ga0501046_0122471 3300049580 Bacteria 1978
99 Ga0501047_0007228 3300049581 Bacteria 10438
100 nmdc:mga05p37_123608_c1 3300050507 Bacteria 3179
101 nmdc:mga05p37_6289_c1 3300050507 Bacteria 13971
102 nmdc:mga05p37_92815_c1 3300050507 Bacteria 3720
103 nmdc:mga09592_41826_c1 3300050508 Bacteria 3855
104 nmdc:mga0qj67_77288_c1 3300050509 Bacteria 2663
105 nmdc:mga06r32_24390_c1 3300050510 Bacteria 5613
106 nmdc:mga06r32_83261_c1 3300050510 Bacteria 3117
107 2832008733 2832004796 Bacteria 6538017
108 2501945719 2501939600 Bacteria 6907073
109 2623587467 2622736626 Bacteria 7181580
110 2676481940 2675903059 Bacteria 8644972
111 2753262592 2751185782 Bacteria 11227053
112 2772643845 2772190715 Bacteria 6959372
113 2831938580 2831935698 Bacteria 5963223
114 2855672826 2855670206 Bacteria 7120389
115 2855677287 2855676851 Bacteria 7063653
116 2855688164 2855683550 Bacteria 7134265
117 2856861335 2856858025 Bacteria 7255264
118 2857294840 2857288857 Bacteria 7189066
119 2858855465 2858848962 Bacteria 6963058
120 2858885449 2858882152 Bacteria 7230291
121 2858892234 2858888857 Bacteria 7060307
122 2858902067 2858895516 Bacteria 7378898
123 2858904030 2858902515 Bacteria 7086037
124 2866069761 2866065130 Bacteria 6518152
125 2867305819 2867302475 Bacteria 7087181
126 2867315400 2867312974 Bacteria 7058875
127 2867325528 2867319477 Bacteria 7069771
128 2867509934 2867507094 Bacteria 6506033
129 2869055188 2869048445 Bacteria 6875584
130 2869062889 2869061728 Bacteria 7112407
131 2869072515 2869068681 Bacteria 7205615
132 2880492760 2880489317 Bacteria 7096270
133 2880499554 2880495981 Bacteria 7340502
134 2887481727 2887478801 Bacteria 8972725
135 2902587737 2902582711 Bacteria 6187705
136 2929221518 2929219909 Bacteria 6984360
137 2929228145 2929226422 Bacteria 7248583
138 2996226856 2996221748 Bacteria 6799777
139 649812089 649633069 Bacteria 6962533
140 8001789032 8001781756 Bacteria 9586736
141 8003862479 8003856774 Bacteria 7675274
142 8054705983 8054704163 Bacteria 7247792
143 8054732195 8054727385 Bacteria 7558670
144 8054740934 8054734606 Bacteria 6947278
145 JGI25406J46586_10015534
146 rootH2_10099973
147 Ga0070658_10160567
148 Ga0070683_100161136
149 Ga0070680_100430686
150 Ga0070682_100074532
151 Ga0070668_100000476
152 Ga0070668_100210075
153 Ga0070674_100287323
154 Ga0070667_100016363
155 Ga0070713_100327514
156 Ga0070679_100140996
157 Ga0070684_100208424
158 Ga0070664_100173131
159 Ga0068859_100026920
160 Ga0068859_100230974
161 Ga0068863_100077955
162 Ga0068858_100043539
163 Ga0068860_100107628
164 Ga0068862_100160723
165 Ga0081540_1024132
166 Ga0081539_10000253
167 Ga0081539_10001076
168 Ga0081539_10001422
169 Ga0081539_10011784
170 Ga0081539_10013998
171 Ga0081539_10020399
172 Ga0075428_100023722
173 Ga0075428_100122572
174 Ga0075428_100399422
175 Ga0075430_100076488
176 Ga0075431_100093499
177 Ga0075429_100051369
178 Ga0097620_100026920
179 Ga0097620_100230983
180 Ga0114129_10000391
181 Ga0114129_10014942
182 Ga0114129_10023347
183 Ga0105248_10355658
184 Ga0157369_10071965
185 Ga0157375_10469466
186 Ga0163163_10438781
187 Ga0157376_10209662
188 Ga0207705_10049136
189 Ga0207652_10119971
190 Ga0207700_10132586
191 Ga0207689_10149681
192 Ga0207661_10023347
193 Ga0207668_10147471
194 Ga0207703_10136266
195 Ga0207678_10145486
196 Ga0207641_10080931
197 Ga0207674_10121507
198 Ga0268265_10037774
199 Ga0268264_10062974
200 Ga0307517_10230837
201 Ga0307515_10000146
202 Ga0307515_10003313
203 Ga0307515_10025553
204 Ga0307515_10079459
205 Ga0307512_10007243
206 Ga0307513_10011654
207 Ga0307408_100024404
208 Ga0307508_10003465
209 Ga0307508_10053006
210 Ga0307516_10000787
211 Ga0307516_10020306
212 Ga0307516_10078549
213 Ga0307405_10034563
214 Ga0307410_10261949
215 Ga0326468_10000593
216 Ga0307406_10056780
217 Ga0307407_10172749
218 Ga0307409_100070634
219 Ga0307416_100103472
220 Ga0307416_100105119
221 Ga0307415_100006577
222 Ga0307415_100091700
223 Ga0307415_100203279
224 Ga0307415_100323450
225 Ga0373940_0000863
226 Ga0373951_0000432
227 Ga0373941_0041819
228 Ga0373942_0006771
229 Ga0373935_0016223
230 Ga0373937_0110730
231 Ga0395900_0094260
232 Ga0395898_0072324
233 Ga0395901_0044170
234 Ga0495606_0004164
235 Ga0495668_0000529
236 Ga0495625_0002762
237 Ga0495602_0228198
238 Ga0495626_0001505
239 Ga0496108_0000085
240 Ga0496112_0268492
241 Ga0496112_0327732
242 Ga0501046_0122471
243 Ga0501047_0007228
244 nmdc:mga05p37_123608_c1
245 nmdc:mga05p37_6289_c1
246 nmdc:mga05p37_92815_c1
247 nmdc:mga09592_41826_c1
248 nmdc:mga0qj67_77288_c1
249 nmdc:mga06r32_24390_c1
250 nmdc:mga06r32_83261_c1
251 2832008733
252 2501945719
253 2623587467
254 2676481940
255 2753262592
256 2772643845
257 2831938580
258 2855672826
259 2855677287
260 2855688164
261 2856861335
262 2857294840
263 2858855465
264 2858885449
265 2858892234
266 2858902067
267 2858904030
268 2866069761
269 2867305819
270 2867315400
271 2867325528
272 2867509934
273 2869055188
274 2869062889
275 2869072515
276 2880492760
277 2880499554
278 2887481727
279 2902587737
280 2929221518
281 2929228145
282 2996226856
283 649812089
284 8001789032
285 8003862479
286 8054705983
287 8054732195
288 8054740934

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01842

ACT

ACT domain

1

62

0.93

PF00583

Acetyltransf_1

Acetyltransferase (GNAT) family

197

319

0.81

PF13302

Acetyltransf_3

Acetyltransferase (GNAT) domain

184

319

0.8

PF08445

FR47

FR47-like protein

247

323

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u5y-assembly1.cif.gz_A crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9191 175 337
4nxy-assembly1.cif.gz_A crystal structure of the gnat domain of s. lividans pat 0.9053 175 337
4u5y-assembly1.cif.gz_A crystal structure of the complex between the gnat domain of s. lividans pat and the acetyl-coa synthetase c-terminal domain of s. enterica 0.9033 175 337
3f8k-assembly1.cif.gz_A crystal structure of protein acetyltransferase (pat) from sulfolobus solfataricus 0.8766 191 338
3f8k-assembly1.cif.gz_A crystal structure of protein acetyltransferase (pat) from sulfolobus solfataricus 0.8577 191 338
ID Description Score Start End Superfamily
4u5yA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9191 175 337 3.40.630.30
af_P76594_717_886_3.40.630.30 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.904 181 338 3.40.630.30
4u5yA00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Gcn5-related N-acetyltransferase (GNAT) 0.9033 175 337 3.40.630.30
af_Q57693_77_143_3.30.70.260 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8775 5 73 3.30.70.260
af_K7WGI1_199_357_2.30.29.30 Mainly Beta;Roll;PH-domain like;Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.8771 1 67 2.30.29.30
ID Description Score Start End GO Terms
AF-A0A7C3SRM1-F1-model_v4 GNAT family N-acetyltransferase 0.9483 176 336 GO:0006083
GO:0008775
GO:0016747
AF-A0A6G3TB32-F1-model_v4 GNAT family N-acetyltransferase 0.946 3 69 GO:0016020
GO:0016740
AF-A0A1Q7VWD3-F1-model_v4 ACT domain-containing protein 0.9408 1 176 GO:0016020
AF-A0A0L0FET7-F1-model_v4 N-acetyltransferase domain-containing protein 0.9403 179 338 GO:0016747
AF-A0A6F8Y8X0-F1-model_v4 N-acetyltransferase domain-containing protein 0.9392 183 348 GO:0016747

Map