F193095

General Info

Members Datasets Scaffolds Average Seq Length
144 114 288 402

Family's Representative Sequence

Representative Sequence 3300053090|Ga0500646_0009781|Ga0500646_0009781_335_1666
Length 443
Sequence MAAMPQCVKTLSVGCPRPVVRRTSHLARGRWQTRRRYAMSGIAMSDLDSFRSGLAEFLERELPGKLGELPPPSGDYWGGRKPELPHPQSARYCALMAERGLTAPTWPKEYGGGGLDKAQAKVLLAELRRLHLPLPLVGFGISMIGPTLLQFGTEEQKREHLPKIVRGEIRWAQGYSEPNAGSDLASVQASARFAGDELIINGQKIWTSYGDKADWMFGIFRTDAGGKKQEGITFLLLDMAQPGVEVRPIKLISGASPFCETFFTDARAHTKDIIFGAGKGWTVAKALLGHERNMIGDVFGAGAGARNLATAGNPLVELAREHLGGDRRIADPLVRDRVAQVSMDERCFALTTQRSADSLKAGHKPGPESSIFKIYGTELNQRRHELMMSIRGPQGLGWEGKGFEDRDLQQTRDWLRSRGNTIEGGTSEVQLNIIAKHVLALPD

Samples

Sample ID Description Type Environment
1 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
10 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
18 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
31 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
46 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
47 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
55 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
56 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
57 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
58 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
68 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
69 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
75 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
76 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
85 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
86 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
87 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
88 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
92 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
95 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
96 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
100 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
101 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
102 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
103 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
104 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
105 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
106 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
107 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
108 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
112 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
113 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
114 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.22
Metatranscriptomes 0
Isolates 2.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.81
Nodule 0
Rhizoplane 5.56
Rhizosphere 73.61
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500646_0009781 3300053090 Bacteria 2453
2 JGI24741J21665_1002975 3300001915 Bacteria 4221
3 JGI24739J22299_10006353 3300001989 Bacteria 4463
4 Ga0070690_100002872 3300005330 Bacteria 9294
5 Ga0070690_100079078 3300005330 Bacteria 2150
6 Ga0068869_100004168 3300005334 Bacteria 8966
7 Ga0070689_100008560 3300005340 Bacteria 7212
8 Ga0070674_100021530 3300005356 Bacteria 4142
9 Ga0070659_100000040 3300005366 Bacteria 104145
10 Ga0068864_100070058 3300005618 Bacteria 3051
11 Ga0068861_100064798 3300005719 Bacteria 2813
12 Ga0068863_100052240 3300005841 Bacteria 3874
13 Ga0081455_10014918 3300005937 Bacteria 7572
14 Ga0081455_10039276 3300005937 Bacteria 4184
15 Ga0081539_10000721 3300005985 Bacteria 66220
16 Ga0070717_10024014 3300006028 Bacteria 4837
17 Ga0070717_10074658 3300006028 Bacteria 2835
18 Ga0075365_10011962 3300006038 Bacteria 5127
19 Ga0075364_10010487 3300006051 Bacteria 5598
20 Ga0075367_10092434 3300006178 Bacteria 1842
21 Ga0068871_100131939 3300006358 Bacteria 2119
22 Ga0075428_100200418 3300006844 Bacteria 2158
23 Ga0075430_100098053 3300006846 Bacteria 2449
24 Ga0075431_100122592 3300006847 Bacteria 2682
25 Ga0068865_100177565 3300006881 Bacteria 1638
26 Ga0105240_10019074 3300009093 Bacteria 9173
27 Ga0105245_10077221 3300009098 Bacteria 3036
28 Ga0105243_10241094 3300009148 Bacteria 1609
29 Ga0105242_10041453 3300009176 Bacteria 3714
30 Ga0105249_10032359 3300009553 Bacteria 4731
31 Ga0105249_10044493 3300009553 Bacteria 4037
32 Ga0157375_10136876 3300013308 Bacteria 2574
33 Ga0157380_10110197 3300014326 Bacteria 2311
34 Ga0157379_10007499 3300014968 Bacteria 9443
35 Ga0163161_10117287 3300017792 Bacteria 1996
36 Ga0213876_10000686 3300021384 Bacteria 23939
37 Ga0207654_10080356 3300025911 Bacteria 1960
38 Ga0207695_10005382 3300025913 Bacteria 17008
39 Ga0207662_10030215 3300025918 Bacteria 3143
40 Ga0207687_10052329 3300025927 Bacteria 2849
41 Ga0207690_10000134 3300025932 Bacteria 60374
42 Ga0207670_10015787 3300025936 Bacteria 4522
43 Ga0207689_10020069 3300025942 Bacteria 5627
44 Ga0207703_10074522 3300026035 Bacteria 2811
45 Ga0207708_10012971 3300026075 Bacteria 6215
46 Ga0207708_10027560 3300026075 Bacteria 4302
47 Ga0207648_10021846 3300026089 Bacteria 5749
48 Ga0207675_100056089 3300026118 Bacteria 3675
49 Ga0268265_10182883 3300028380 Bacteria 1803
50 Ga0268265_10341322 3300028380 Bacteria 1364
51 Ga0265337_1000764 3300028556 Bacteria 16961
52 Ga0265334_10052220 3300028573 Bacteria 1565
53 Ga0265332_10001692 3300031238 Bacteria 12032
54 Ga0265320_10000138 3300031240 Bacteria 62264
55 Ga0265327_10003339 3300031251 Bacteria 15491
56 Ga0265316_10049954 3300031344 Bacteria 3293
57 Ga0307513_10005412 3300031456 Bacteria 16878
58 Ga0307509_10009392 3300031507 Bacteria 12239
59 Ga0307509_10014709 3300031507 Bacteria 9180
60 Ga0307509_10043578 3300031507 Bacteria 4855
61 Ga0316579_10034541 3300031691 Bacteria 2327
62 Ga0307413_10060792 3300031824 Bacteria 2327
63 Ga0307507_10062790 3300033179 Bacteria 3446
64 Ga0373949_0000005 3300035090 Bacteria 81783
65 Ga0373949_0000243 3300035090 Bacteria 20396
66 Ga0373936_0000009 3300035113 Bacteria 263478
67 Ga0373961_0000009 3300035241 Bacteria 136228
68 Ga0316574_0040985 3300035398 Bacteria 2852
69 Ga0316574_0129720 3300035398 Bacteria 1622
70 Ga0373937_0011505 3300036401 Bacteria 7767
71 Ga0373937_0169982 3300036401 Bacteria 2045
72 Ga0395899_0003012 3300037312 Bacteria 13453
73 Ga0395905_0029614 3300037471 Bacteria 5159
74 Ga0395901_0000050 3300038443 Bacteria 171046
75 Ga0400483_035645 3300039062 Bacteria 3956
76 Ga0400483_220748 3300039062 Bacteria 39057
77 Ga0436365_0031959 3300039437 Bacteria 106267
78 Ga0495638_0000224 3300046460 Bacteria 77870
79 Ga0495586_0082649 3300046535 Bacteria 1766
80 Ga0495669_0000027 3300046684 Bacteria 109260
81 Ga0496100_0010232 3300048903 Bacteria 5306
82 Ga0496102_0167317 3300048905 Bacteria 2069
83 Ga0496103_0019694 3300048906 Bacteria 4051
84 Ga0496104_0274202 3300048907 Bacteria 1599
85 Ga0496105_0113965 3300048908 Bacteria 2230
86 Ga0496106_0030899 3300048909 Bacteria 3993
87 Ga0496109_0268295 3300048912 Bacteria 1608
88 Ga0496111_0142309 3300048914 Bacteria 1777
89 Ga0501036_0149807 3300049572 Bacteria 1968
90 Ga0501038_0099258 3300049574 Bacteria 2427
91 Ga0501039_0116589 3300049575 Bacteria 2091
92 Ga0501041_0052731 3300049577 Bacteria 2480
93 Ga0501042_0054450 3300049578 Bacteria 2854
94 Ga0501042_0173664 3300049578 Bacteria 1555
95 Ga0501043_0080966 3300049579 Bacteria 2551
96 Ga0501047_0001966 3300049581 Bacteria 19734
97 Ga0501047_0006106 3300049581 Bacteria 11322
98 Ga0501067_0000554 3300049583 Bacteria 20231
99 Ga0501067_0003128 3300049583 Bacteria 9139
100 Ga0501068_0000072 3300049584 Bacteria 40338
101 Ga0501068_0000120 3300049584 Bacteria 34509
102 Ga0501069_0000802 3300049585 Bacteria 14825
103 Ga0501069_0004922 3300049585 Bacteria 6925
104 Ga0501072_0000017 3300049588 Bacteria 161678
105 Ga0501072_0000040 3300049588 Bacteria 108581
106 Ga0501073_0013963 3300049589 Bacteria 5836
107 Ga0501073_0045506 3300049589 Bacteria 3091
108 Ga0501074_0002602 3300049590 Bacteria 12613
109 Ga0501074_0053839 3300049590 Bacteria 2903
110 Ga0501076_0004998 3300049592 Bacteria 9492
111 Ga0501077_0021233 3300049593 Bacteria 4109
112 Ga0501079_0005115 3300049741 Bacteria 9743
113 Ga0501079_0165072 3300049741 Bacteria 1727
114 Ga0501079_0259846 3300049741 Bacteria 1357
115 Ga0501080_0165255 3300049742 Bacteria 2042
116 Ga0501080_0170642 3300049742 Bacteria 2006
117 Ga0501083_0018363 3300049744 Bacteria 4874
118 Ga0501083_0035554 3300049744 Bacteria 3402
119 Ga0501083_0041094 3300049744 Bacteria 3137
120 nmdc:mga0yw44_176037_c1 3300050492 Bacteria 1406
121 nmdc:mga06z11_129773_c1 3300050494 Bacteria 1414
122 nmdc:mga0qj67_201269_c1 3300050509 Bacteria 1618
123 nmdc:mga06r32_294788_c1 3300050510 Bacteria 1608
124 nmdc:mga0rr50_154175_c1 3300050513 Bacteria 1859
125 Ga0500566_0003875 3300053094 Bacteria 8928
126 Ga0500566_0009611 3300053094 Bacteria 5715
127 Ga0500640_002701 3300053095 Bacteria 5941
128 Ga0500554_002547 3300053102 Bacteria 3600
129 Ga0500572_008860 3300053111 Bacteria 2364
130 Ga0500595_000192 3300053119 Bacteria 41638
131 Ga0500595_001674 3300053119 Bacteria 11647
132 Ga0500614_000731 3300053123 Bacteria 8375
133 Ga0500559_0026483 3300053136 Bacteria 2470
134 Ga0500639_096826 3300053163 Bacteria 1460
135 Ga0500636_0021045 3300053177 Bacteria 3863
136 Ga0501084_0000005 3300054114 Bacteria 237244
137 Ga0501084_0000037 3300054114 Bacteria 108616
138 Ga0501084_0017372 3300054114 Bacteria 5979
139 Ga0501082_0000078 3300060353 Bacteria 72132
140 Ga0501082_0000171 3300060353 Bacteria 56020
141 2643999587 2643221598 Bacteria 4578346
142 2644088570 2643221614 Bacteria 4260023
143 2644343806 2643221661 Bacteria 4267604
144 2644368716 2643221666 Bacteria 4265935
145 Ga0500646_0009781
146 JGI24741J21665_1002975
147 JGI24739J22299_10006353
148 Ga0070690_100002872
149 Ga0070690_100079078
150 Ga0068869_100004168
151 Ga0070689_100008560
152 Ga0070674_100021530
153 Ga0070659_100000040
154 Ga0068864_100070058
155 Ga0068861_100064798
156 Ga0068863_100052240
157 Ga0081455_10014918
158 Ga0081455_10039276
159 Ga0081539_10000721
160 Ga0070717_10024014
161 Ga0070717_10074658
162 Ga0075365_10011962
163 Ga0075364_10010487
164 Ga0075367_10092434
165 Ga0068871_100131939
166 Ga0075428_100200418
167 Ga0075430_100098053
168 Ga0075431_100122592
169 Ga0068865_100177565
170 Ga0105240_10019074
171 Ga0105245_10077221
172 Ga0105243_10241094
173 Ga0105242_10041453
174 Ga0105249_10032359
175 Ga0105249_10044493
176 Ga0157375_10136876
177 Ga0157380_10110197
178 Ga0157379_10007499
179 Ga0163161_10117287
180 Ga0213876_10000686
181 Ga0207654_10080356
182 Ga0207695_10005382
183 Ga0207662_10030215
184 Ga0207687_10052329
185 Ga0207690_10000134
186 Ga0207670_10015787
187 Ga0207689_10020069
188 Ga0207703_10074522
189 Ga0207708_10012971
190 Ga0207708_10027560
191 Ga0207648_10021846
192 Ga0207675_100056089
193 Ga0268265_10182883
194 Ga0268265_10341322
195 Ga0265337_1000764
196 Ga0265334_10052220
197 Ga0265332_10001692
198 Ga0265320_10000138
199 Ga0265327_10003339
200 Ga0265316_10049954
201 Ga0307513_10005412
202 Ga0307509_10009392
203 Ga0307509_10014709
204 Ga0307509_10043578
205 Ga0316579_10034541
206 Ga0307413_10060792
207 Ga0307507_10062790
208 Ga0373949_0000005
209 Ga0373949_0000243
210 Ga0373936_0000009
211 Ga0373961_0000009
212 Ga0316574_0040985
213 Ga0316574_0129720
214 Ga0373937_0011505
215 Ga0373937_0169982
216 Ga0395899_0003012
217 Ga0395905_0029614
218 Ga0395901_0000050
219 Ga0400483_035645
220 Ga0400483_220748
221 Ga0436365_0031959
222 Ga0495638_0000224
223 Ga0495586_0082649
224 Ga0495669_0000027
225 Ga0496100_0010232
226 Ga0496102_0167317
227 Ga0496103_0019694
228 Ga0496104_0274202
229 Ga0496105_0113965
230 Ga0496106_0030899
231 Ga0496109_0268295
232 Ga0496111_0142309
233 Ga0501036_0149807
234 Ga0501038_0099258
235 Ga0501039_0116589
236 Ga0501041_0052731
237 Ga0501042_0054450
238 Ga0501042_0173664
239 Ga0501043_0080966
240 Ga0501047_0001966
241 Ga0501047_0006106
242 Ga0501067_0000554
243 Ga0501067_0003128
244 Ga0501068_0000072
245 Ga0501068_0000120
246 Ga0501069_0000802
247 Ga0501069_0004922
248 Ga0501072_0000017
249 Ga0501072_0000040
250 Ga0501073_0013963
251 Ga0501073_0045506
252 Ga0501074_0002602
253 Ga0501074_0053839
254 Ga0501076_0004998
255 Ga0501077_0021233
256 Ga0501079_0005115
257 Ga0501079_0165072
258 Ga0501079_0259846
259 Ga0501080_0165255
260 Ga0501080_0170642
261 Ga0501083_0018363
262 Ga0501083_0035554
263 Ga0501083_0041094
264 nmdc:mga0yw44_176037_c1
265 nmdc:mga06z11_129773_c1
266 nmdc:mga0qj67_201269_c1
267 nmdc:mga06r32_294788_c1
268 nmdc:mga0rr50_154175_c1
269 Ga0500566_0003875
270 Ga0500566_0009611
271 Ga0500640_002701
272 Ga0500554_002547
273 Ga0500572_008860
274 Ga0500595_000192
275 Ga0500595_001674
276 Ga0500614_000731
277 Ga0500559_0026483
278 Ga0500639_096826
279 Ga0500636_0021045
280 Ga0501084_0000005
281 Ga0501084_0000037
282 Ga0501084_0017372
283 Ga0501082_0000078
284 Ga0501082_0000171
285 2643999587
286 2644088570
287 2644343806
288 2644368716

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

278

439

0.88

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

172

266

0.86

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

46

168

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.7317 9 401
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.727 9 394
6wy8-assembly1.cif.gz_D tcur3481-tcur3483 steroid acad 0.7221 9 401
8hk0-assembly1.cif.gz_A crystal structure of fic32-33 complex from streptomyces ficellus nrrl 8067 0.7157 9 394
6wy9-assembly1.cif.gz_A-2 tcur3481-tcur3483 steroid acad g363a variant 0.7127 10 401
ID Description Score Start End Superfamily
4x28D02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9243 152 238 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9129 136 244 2.40.110.10
af_Q6NWF0_171_282_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8963 136 244 2.40.110.10
af_P96855_462_572_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8895 136 244 2.40.110.10
5iduB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.8894 136 249 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9787 151 253 GO:0005886
GO:0016627
AF-A0A353HX35-F1-model_v4 Acyl-CoA dehydrogenase 0.9604 151 253 GO:0005886
GO:0016627
AF-X7ZXH6-F1-model_v4 Acyl-CoA dehydrogenase, N-terminal domain protein 0.9329 103 255 GO:0005886
GO:0016627
GO:0050660
AF-A0A2E8VNZ5-F1-model_v4 Acyl-CoA dehydrogenase 0.9175 12 359 GO:0005886
GO:0016627
GO:0050660
AF-A0A2E8VNZ5-F1-model_v4 Acyl-CoA dehydrogenase 0.9125 12 359 GO:0005886
GO:0016627
GO:0050660

Map