F192655

General Info

Members Datasets Scaffolds Average Seq Length
144 96 288 378

Family's Representative Sequence

Representative Sequence 3300046474|Ga0495605_0052072|Ga0495605_0052072_34_1158
Length 367
Sequence MHILIAPNAFKNSITAQAAAEAIRDGFESSSLDCTTECFPIADGGDGTAELIIKKLNGTVIPVKVNDPLGRAIEASFGLVDNGLTAIIEMADASGLRLLKQDELNPMRATSYGTGQMIKKALDLGVTKIVIAMGGSATVDGGTGILSALGIKFLGADKTELIDLPGNLFQLQHVNITGLDSRIANCEVIVLCDVDNKLLGNAGAAMIFGPQKGASPADVALLDRGLRKFNKITLNETGRDMASTMYGGAAYAYLNARLVNGVDYFLDITQFDASLHKAHLVVTGEGSIDEQTLQGKGPYGVAKRANTKGIPVIGLAGKIPMEENEKLSKYFKVLLAIGNEPTDIAIALIRTKENLIRVVKQIGELLA

Samples

Sample ID Description Type Environment
1 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
74 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
83 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
84 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
88 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
89 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
90 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
91 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
92 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
93 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
94 2738541284 Pedobacter sp. YR016 Isolate Unclassified
95 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
96 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.92
Metatranscriptomes 0
Isolates 2.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.39
Nodule 0
Rhizoplane 0
Rhizosphere 93.75
Stem 0
Stem Tuber 0
Unclassified 2.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495605_0052072 3300046474 Bacteria 1991
2 SwRhRL2b_contig_56198 2162886007 Bacteria 32690
3 SwRhRL2b_contig_776420 2162886007 Bacteria 1762
4 JGI24744J21845_10001791 3300002077 Bacteria 4312
5 rootL2_10006477 3300003322 Bacteria 6125
6 rootH1_10096269 3300003323 Bacteria 1553
7 Ga0065714_10002823 3300005288 Bacteria 35445
8 Ga0065714_10072735 3300005288 Bacteria 3313
9 Ga0065704_10000215 3300005289 Bacteria 98472
10 Ga0070676_10000351 3300005328 Bacteria 21115
11 Ga0070673_100001687 3300005364 Bacteria 13102
12 Ga0070659_100138207 3300005366 Bacteria 1982
13 Ga0070667_100003381 3300005367 Bacteria 13606
14 Ga0070709_10283230 3300005434 Bacteria 1205
15 Ga0070713_100157660 3300005436 Bacteria 2024
16 Ga0070678_100024245 3300005456 Bacteria 4058
17 Ga0070678_100057932 3300005456 Unclassified 2841
18 Ga0070662_100000050 3300005457 Bacteria 64208
19 Ga0068867_100003010 3300005459 Bacteria 11877
20 Ga0070706_100194386 3300005467 Bacteria 1895
21 Ga0070707_100005579 3300005468 Bacteria 11755
22 Ga0070707_100007300 3300005468 Bacteria 10262
23 Ga0070707_100040326 3300005468 Bacteria 4468
24 Ga0070679_100005839 3300005530 Bacteria 11420
25 Ga0068853_100019133 3300005539 Bacteria 5674
26 Ga0068853_100021738 3300005539 Bacteria 5353
27 Ga0070672_100125206 3300005543 Bacteria 2107
28 Ga0070672_100149563 3300005543 Bacteria 1931
29 Ga0068855_100427526 3300005563 Bacteria 1448
30 Ga0068852_100134294 3300005616 Bacteria 2283
31 Ga0068859_100307671 3300005617 Bacteria 1678
32 Ga0068866_10021349 3300005718 Bacteria 2981
33 Ga0097621_100000200 3300006237 Bacteria 38903
34 Ga0097621_100008677 3300006237 Bacteria 7338
35 Ga0068871_100000174 3300006358 Bacteria 43345
36 Ga0068871_100002604 3300006358 Bacteria 12313
37 Ga0068871_100052910 3300006358 Bacteria 3289
38 Ga0075428_100046909 3300006844 Bacteria 4745
39 Ga0075429_100003145 3300006880 Bacteria 14027
40 Ga0068865_100000100 3300006881 Bacteria 44815
41 Ga0075436_100022627 3300006914 Bacteria 4318
42 Ga0097620_100307644 3300006931 Bacteria 1678
43 Ga0105240_10005758 3300009093 Bacteria 18378
44 Ga0105240_10016885 3300009093 Bacteria 9865
45 Ga0105240_10095156 3300009093 Bacteria 3632
46 Ga0105240_10219117 3300009093 Bacteria 2218
47 Ga0105240_10308183 3300009093 Bacteria 1809
48 Ga0111539_10125453 3300009094 Unclassified 3008
49 Ga0105241_10008225 3300009174 Bacteria 7680
50 Ga0105241_10016349 3300009174 Bacteria 5441
51 Ga0105241_10034234 3300009174 Bacteria 3815
52 Ga0105242_10005478 3300009176 Bacteria 9803
53 Ga0105242_10009969 3300009176 Bacteria 7275
54 Ga0105237_10000528 3300009545 Bacteria 53756
55 Ga0105237_10003373 3300009545 Bacteria 19006
56 Ga0105237_10003465 3300009545 Bacteria 18709
57 Ga0105237_10069270 3300009545 Bacteria 3523
58 Ga0105238_10011689 3300009551 Bacteria 8850
59 Ga0105238_10093878 3300009551 Bacteria 2988
60 Ga0105239_10000006 3300010375 Bacteria 442319
61 Ga0105239_10000014 3300010375 Bacteria 325391
62 Ga0105239_10010983 3300010375 Bacteria 10108
63 Ga0105239_10052740 3300010375 Bacteria 4460
64 Ga0105239_10061527 3300010375 Bacteria 4120
65 Ga0157373_10037513 3300013100 Bacteria 3474
66 Ga0157371_10002875 3300013102 Bacteria 16095
67 Ga0157371_10003151 3300013102 Bacteria 15207
68 Ga0157371_10023975 3300013102 Bacteria 4458
69 Ga0157371_10030394 3300013102 Bacteria 3897
70 Ga0157370_10091092 3300013104 Bacteria 2863
71 Ga0157370_10152703 3300013104 Bacteria 2148
72 Ga0157369_10023681 3300013105 Bacteria 6838
73 Ga0157369_10427087 3300013105 Bacteria 1374
74 Ga0157374_10001143 3300013296 Bacteria 22611
75 Ga0157374_10013032 3300013296 Bacteria 7250
76 Ga0157374_10062295 3300013296 Bacteria 3496
77 Ga0157378_10005740 3300013297 Bacteria 10868
78 Ga0157378_10012490 3300013297 Bacteria 7435
79 Ga0163162_10000062 3300013306 Bacteria 105579
80 Ga0157372_10016032 3300013307 Bacteria 8037
81 Ga0157372_10124299 3300013307 Bacteria 2966
82 Ga0157375_10070635 3300013308 Bacteria 3502
83 Ga0163163_10251804 3300014325 Bacteria 1817
84 Ga0157377_10050911 3300014745 Bacteria 2335
85 Ga0157376_10042705 3300014969 Bacteria 3717
86 Ga0182006_1002465 3300015261 Bacteria 10102
87 Ga0207645_10000144 3300025907 Bacteria 55568
88 Ga0207654_10006924 3300025911 Bacteria 5710
89 Ga0207654_10018827 3300025911 Bacteria 3630
90 Ga0207695_10002684 3300025913 Bacteria 25964
91 Ga0207695_10007587 3300025913 Bacteria 13754
92 Ga0207695_10344614 3300025913 Bacteria 1377
93 Ga0207671_10001288 3300025914 Bacteria 29500
94 Ga0207671_10004146 3300025914 Bacteria 14009
95 Ga0207671_10011329 3300025914 Bacteria 7264
96 Ga0207671_10039612 3300025914 Bacteria 3489
97 Ga0207652_10000016 3300025921 Bacteria 188815
98 Ga0207652_10001176 3300025921 Bacteria 23527
99 Ga0207652_10004709 3300025921 Bacteria 11062
100 Ga0207646_10005639 3300025922 Bacteria 13146
101 Ga0207646_10035601 3300025922 Bacteria 4495
102 Ga0207690_10040079 3300025932 Bacteria 3060
103 Ga0207706_10000007 3300025933 Bacteria 211081
104 Ga0207686_10000704 3300025934 Bacteria 20704
105 Ga0207704_10000125 3300025938 Bacteria 41739
106 Ga0207651_10005122 3300025960 Bacteria 6691
107 Ga0207712_10041435 3300025961 Bacteria 3165
108 Ga0207712_10313610 3300025961 Bacteria 1291
109 Ga0207658_10003573 3300025986 Bacteria 10976
110 Ga0207639_10016184 3300026041 Bacteria 5270
111 Ga0207639_10017201 3300026041 Bacteria 5126
112 Ga0207648_10046625 3300026089 Bacteria 3800
113 Ga0207683_10042169 3300026121 Bacteria 3985
114 Ga0207698_10025617 3300026142 Bacteria 4158
115 Ga0207698_10106243 3300026142 Bacteria 2341
116 Ga0268264_10097299 3300028381 Unclassified 2551
117 Ga0307517_10002728 3300028786 Bacteria 28176
118 Ga0307515_10000024 3300028794 Bacteria 393119
119 Ga0307511_10000276 3300030521 Bacteria 53817
120 Ga0307508_10047904 3300031616 Bacteria 3809
121 Ga0307412_10000031 3300031911 Bacteria 207128
122 Ga0307414_10002719 3300032004 Bacteria 9302
123 Ga0373937_0032667 3300036401 Bacteria 4722
124 Ga0373937_0376967 3300036401 Bacteria 1345
125 Ga0395899_0037545 3300037312 Bacteria 3631
126 Ga0395900_0000738 3300037418 Bacteria 43440
127 Ga0395900_0010718 3300037418 Bacteria 9375
128 Ga0395898_0002417 3300037466 Bacteria 22092
129 Ga0395901_0065873 3300038443 Bacteria 3773
130 Ga0436361_0890161 3300039447 Bacteria 6091
131 Ga0439448_0006563 3300042005 Bacteria 3351
132 Ga0495687_002416 3300047443 Bacteria 15041
133 Ga0495686_0103266 3300047472 Bacteria 1717
134 Ga0501042_0042433 3300049578 Bacteria 3238
135 Ga0501241_004823 3300049758 Bacteria 2519
136 nmdc:mga09592_3790_c1 3300050508 Bacteria 12165
137 nmdc:mga0qj67_83653_c1 3300050509 Bacteria 2558
138 nmdc:mga08y16_162172_c1 3300050511 Bacteria 2323
139 nmdc:mga08x19_38889_c1 3300050514 Bacteria 3022
140 Ga0500635_0000949 3300053080 Bacteria 6967
141 Ga0500651_0000149 3300053093 Bacteria 44496
142 2738762912 2738541284 Bacteria 5199923
143 2852630121 2852627209 Bacteria 5896285
144 8055589710 8055588893 Bacteria 3619545
145 Ga0495605_0052072
146 SwRhRL2b_contig_56198
147 SwRhRL2b_contig_776420
148 JGI24744J21845_10001791
149 rootL2_10006477
150 rootH1_10096269
151 Ga0065714_10002823
152 Ga0065714_10072735
153 Ga0065704_10000215
154 Ga0070676_10000351
155 Ga0070673_100001687
156 Ga0070659_100138207
157 Ga0070667_100003381
158 Ga0070709_10283230
159 Ga0070713_100157660
160 Ga0070678_100024245
161 Ga0070678_100057932
162 Ga0070662_100000050
163 Ga0068867_100003010
164 Ga0070706_100194386
165 Ga0070707_100005579
166 Ga0070707_100007300
167 Ga0070707_100040326
168 Ga0070679_100005839
169 Ga0068853_100019133
170 Ga0068853_100021738
171 Ga0070672_100125206
172 Ga0070672_100149563
173 Ga0068855_100427526
174 Ga0068852_100134294
175 Ga0068859_100307671
176 Ga0068866_10021349
177 Ga0097621_100000200
178 Ga0097621_100008677
179 Ga0068871_100000174
180 Ga0068871_100002604
181 Ga0068871_100052910
182 Ga0075428_100046909
183 Ga0075429_100003145
184 Ga0068865_100000100
185 Ga0075436_100022627
186 Ga0097620_100307644
187 Ga0105240_10005758
188 Ga0105240_10016885
189 Ga0105240_10095156
190 Ga0105240_10219117
191 Ga0105240_10308183
192 Ga0111539_10125453
193 Ga0105241_10008225
194 Ga0105241_10016349
195 Ga0105241_10034234
196 Ga0105242_10005478
197 Ga0105242_10009969
198 Ga0105237_10000528
199 Ga0105237_10003373
200 Ga0105237_10003465
201 Ga0105237_10069270
202 Ga0105238_10011689
203 Ga0105238_10093878
204 Ga0105239_10000006
205 Ga0105239_10000014
206 Ga0105239_10010983
207 Ga0105239_10052740
208 Ga0105239_10061527
209 Ga0157373_10037513
210 Ga0157371_10002875
211 Ga0157371_10003151
212 Ga0157371_10023975
213 Ga0157371_10030394
214 Ga0157370_10091092
215 Ga0157370_10152703
216 Ga0157369_10023681
217 Ga0157369_10427087
218 Ga0157374_10001143
219 Ga0157374_10013032
220 Ga0157374_10062295
221 Ga0157378_10005740
222 Ga0157378_10012490
223 Ga0163162_10000062
224 Ga0157372_10016032
225 Ga0157372_10124299
226 Ga0157375_10070635
227 Ga0163163_10251804
228 Ga0157377_10050911
229 Ga0157376_10042705
230 Ga0182006_1002465
231 Ga0207645_10000144
232 Ga0207654_10006924
233 Ga0207654_10018827
234 Ga0207695_10002684
235 Ga0207695_10007587
236 Ga0207695_10344614
237 Ga0207671_10001288
238 Ga0207671_10004146
239 Ga0207671_10011329
240 Ga0207671_10039612
241 Ga0207652_10000016
242 Ga0207652_10001176
243 Ga0207652_10004709
244 Ga0207646_10005639
245 Ga0207646_10035601
246 Ga0207690_10040079
247 Ga0207706_10000007
248 Ga0207686_10000704
249 Ga0207704_10000125
250 Ga0207651_10005122
251 Ga0207712_10041435
252 Ga0207712_10313610
253 Ga0207658_10003573
254 Ga0207639_10016184
255 Ga0207639_10017201
256 Ga0207648_10046625
257 Ga0207683_10042169
258 Ga0207698_10025617
259 Ga0207698_10106243
260 Ga0268264_10097299
261 Ga0307517_10002728
262 Ga0307515_10000024
263 Ga0307511_10000276
264 Ga0307508_10047904
265 Ga0307412_10000031
266 Ga0307414_10002719
267 Ga0373937_0032667
268 Ga0373937_0376967
269 Ga0395899_0037545
270 Ga0395900_0000738
271 Ga0395900_0010718
272 Ga0395898_0002417
273 Ga0395901_0065873
274 Ga0436361_0890161
275 Ga0439448_0006563
276 Ga0495687_002416
277 Ga0495686_0103266
278 Ga0501042_0042433
279 Ga0501241_004823
280 nmdc:mga09592_3790_c1
281 nmdc:mga0qj67_83653_c1
282 nmdc:mga08y16_162172_c1
283 nmdc:mga08x19_38889_c1
284 Ga0500635_0000949
285 Ga0500651_0000149
286 2738762912
287 2852630121
288 8055589710

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02595

Gly_kinase

Glycerate kinase family

3

367

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1to6-assembly1.cif.gz_A glycerate kinase from neisseria meningitidis (serogroup a) 0.9342 2 379
1to6-assembly1.cif.gz_A glycerate kinase from neisseria meningitidis (serogroup a) 0.9293 2 379
3cwc-assembly1.cif.gz_B crystal structure of putative glycerate kinase 2 from salmonella typhimurium lt2 0.8362 2 374
3cwc-assembly1.cif.gz_A crystal structure of putative glycerate kinase 2 from salmonella typhimurium lt2 0.8307 1 381
3cwc-assembly1.cif.gz_A crystal structure of putative glycerate kinase 2 from salmonella typhimurium lt2 0.8287 1 381
ID Description Score Start End Superfamily
af_P23524_42_266_3.90.1510.10 Alpha Beta;Alpha-Beta Complex;Glycerate kinase, domain 2;Glycerate kinase, domain 2 0.9782 45 267 3.90.1510.10
af_P23524_42_266_3.90.1510.10 Alpha Beta;Alpha-Beta Complex;Glycerate kinase, domain 2;Glycerate kinase, domain 2 0.9654 45 267 3.90.1510.10
af_P23524_267_371_3.40.50.10350 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycerate kinase; domain 1 0.9396 268 370 3.40.50.10350
af_Q2G065_49_259_3.90.1510.10 Alpha Beta;Alpha-Beta Complex;Glycerate kinase, domain 2;Glycerate kinase, domain 2 0.9296 53 265 3.90.1510.10
1to6B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycerate kinase; domain 1 0.9257 2 379 3.40.50.10350
ID Description Score Start End GO Terms
AF-A0A1Y9THG2-F1-model_v4 Glycerate kinase (EC 2.7.1.31) 0.9901 91 256 GO:0008887
GO:0031388
AF-A0A258KLZ7-F1-model_v4 Glycerate kinase 0.9896 2 315 GO:0008887
GO:0031388
AF-A0A3D3CWH0-F1-model_v4 Glycerate kinase 0.9876 2 264 GO:0008887
GO:0031388
AF-A0A454KR43-F1-model_v4 deleted 0.984 108 258
AF-A0A3D3CWH0-F1-model_v4 Glycerate kinase 0.9839 2 264 GO:0008887
GO:0031388

Map