F190158

General Info

Members Datasets Scaffolds Average Seq Length
143 111 286 118

Family's Representative Sequence

Representative Sequence 3300054114|Ga0501084_0114229|Ga0501084_0114229_1800_2249
Length 138
Sequence MATGWTPAEVSRAPRPGKNEKEVPAVNVVLWIIAGVLAAAFLAAGTMKVSQPKEKLAASGMGWVESYPAGAVKLIGALEIAAAVGLILPALLDIAPIFVPLAATGLVLMMIGAAITHARRGERPVIAVAWGRFGPYAF

Samples

Sample ID Description Type Environment
1 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
2 3300000041 Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
11 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
12 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
13 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
14 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
29 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
30 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
31 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
32 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
33 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
34 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
35 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
38 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
41 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
42 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
43 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
44 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
47 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
48 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
49 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
50 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
51 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
52 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
61 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
62 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
63 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
64 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
65 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
66 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
67 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
68 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
69 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
70 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
71 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
72 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
75 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
76 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
77 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
78 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
81 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
94 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
100 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
101 3300053106 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 endosphere Metagenome Endosphere
102 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
103 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
104 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
105 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
106 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
107 2643221647 Streptomyces sp. Root369 Isolate Unclassified
108 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
109 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
110 8056054917 Glycomyces luteolus NEAU-A15 Isolate Rhizosphere
111 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.1
Metatranscriptomes 0
Isolates 4.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.29
Nodule 0
Rhizoplane 0.7
Rhizosphere 81.12
Stem 0
Stem Tuber 0
Unclassified 2.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501084_0114229 3300054114 Bacteria 2270
2 ARcpr5oldR_c014505 3300000041 Bacteria 681
3 Ga0070709_10852280 3300005434 Bacteria 718
4 Ga0070714_100159065 3300005435 Bacteria 2042
5 Ga0070663_101263770 3300005455 Bacteria 650
6 Ga0070681_10178101 3300005458 Bacteria 2048
7 Ga0070679_100003874 3300005530 Bacteria 13745
8 Ga0070679_100338452 3300005530 Bacteria 1453
9 Ga0070684_100815376 3300005535 Bacteria 873
10 Ga0068856_100037038 3300005614 Bacteria 4785
11 Ga0075363_100301477 3300006048 Bacteria 930
12 Ga0075428_100019882 3300006844 Bacteria 7435
13 Ga0075428_100422799 3300006844 Bacteria 1428
14 Ga0075428_100774654 3300006844 Bacteria 1020
15 Ga0075430_100030646 3300006846 Bacteria 4568
16 Ga0075431_100135336 3300006847 Bacteria 2540
17 Ga0075431_100177395 3300006847 Bacteria 2188
18 Ga0075431_100656296 3300006847 Bacteria 1029
19 Ga0075431_101779059 3300006847 Bacteria 572
20 Ga0075434_101482537 3300006871 Bacteria 688
21 Ga0075429_100924351 3300006880 Bacteria 763
22 Ga0075429_101009323 3300006880 Bacteria 727
23 Ga0099795_10063855 3300007788 Unclassified 1373
24 Ga0114129_10165536 3300009147 Bacteria 3018
25 Ga0114129_10369584 3300009147 Bacteria 1896
26 Ga0114129_12147634 3300009147 Bacteria 673
27 Ga0157369_10280884 3300013105 Bacteria 1734
28 Ga0207699_10900900 3300025906 Bacteria 652
29 Ga0207707_10272988 3300025912 Bacteria 1465
30 Ga0207652_10009513 3300025921 Bacteria 7815
31 Ga0207652_10278717 3300025921 Bacteria 1508
32 Ga0207664_10036779 3300025929 Bacteria 3785
33 Ga0207665_10797662 3300025939 Unclassified 746
34 Ga0207668_11018026 3300025972 Bacteria 741
35 Ga0207702_10367402 3300026078 Bacteria 1380
36 Ga0207641_10684232 3300026088 Bacteria 1009
37 Ga0307515_10082144 3300028794 Bacteria 4173
38 Ga0307515_10169728 3300028794 Bacteria 2181
39 Ga0307515_10261384 3300028794 Bacteria 1466
40 Ga0307515_10269947 3300028794 Bacteria 1424
41 Ga0307515_10310931 3300028794 Bacteria 1251
42 Ga0307511_10086780 3300030521 Bacteria 2153
43 Ga0316181_1123754 3300030744 Bacteria 2705
44 Ga0307513_10922670 3300031456 Bacteria 581
45 Ga0307508_10281593 3300031616 Unclassified 1256
46 Ga0316576_10019380 3300031727 Bacteria 4661
47 Ga0307516_10024150 3300031730 Bacteria 6213
48 Ga0307516_10998022 3300031730 Bacteria 509
49 Ga0307405_10160854 3300031731 Bacteria 1590
50 Ga0307405_10665103 3300031731 Bacteria 858
51 Ga0307413_10202730 3300031824 Bacteria 1434
52 Ga0307416_100238770 3300032002 Bacteria 1759
53 Ga0307414_10321646 3300032004 Bacteria 1317
54 Ga0307411_10271020 3300032005 Bacteria 1346
55 Ga0307411_11330960 3300032005 Bacteria 655
56 Ga0307415_100077860 3300032126 Bacteria 2356
57 Ga0307510_10458305 3300033180 Bacteria 716
58 Ga0373951_0000003 3300035091 Bacteria 99610
59 Ga0439436_0033355 3300041404 Bacteria 1491
60 Ga0439439_0006291 3300041406 Bacteria 2743
61 Ga0439439_0032314 3300041406 Bacteria 1336
62 Ga0451797_1341208 3300041453 Bacteria 582
63 Ga0451853_1050146 3300041512 Bacteria 907
64 Ga0451853_1208180 3300041512 Bacteria 633
65 Ga0439433_0058958 3300041999 Bacteria 913
66 Ga0439449_0000353 3300042007 Bacteria 16833
67 Ga0439449_0051655 3300042007 Bacteria 1520
68 Ga0439457_010269 3300042014 Bacteria 2157
69 Ga0439462_0087989 3300042015 Bacteria 851
70 Ga0450894_048446 3300042131 Bacteria 622
71 Ga0450898_001681 3300042134 Bacteria 2972
72 Ga0450906_000922 3300042145 Bacteria 6424
73 Ga0466972_0018287 3300044658 Bacteria 3502
74 Ga0466965_0014774 3300044683 Bacteria 3698
75 Ga0466968_0431367 3300044735 Bacteria 649
76 Ga0466960_0598769 3300044901 Bacteria 654
77 Ga0495603_0001038 3300046455 Bacteria 16059
78 Ga0495629_0602913 3300046459 Bacteria 734
79 Ga0495638_0098313 3300046460 Bacteria 1754
80 Ga0495651_0335657 3300046462 Bacteria 1003
81 Ga0495605_0034663 3300046474 Bacteria 2556
82 Ga0495585_0024043 3300046492 Bacteria 3495
83 Ga0495594_0000499 3300046499 Bacteria 20053
84 Ga0495607_0226491 3300046501 Bacteria 911
85 Ga0495583_0016623 3300046506 Bacteria 3946
86 Ga0495583_0211708 3300046506 Bacteria 785
87 Ga0495643_0001271 3300046522 Bacteria 24179
88 Ga0495648_0062771 3300046524 Bacteria 2198
89 Ga0495666_0000986 3300046526 Bacteria 13462
90 Ga0495597_0051396 3300046542 Bacteria 1817
91 Ga0495622_0001762 3300046557 Bacteria 10687
92 Ga0495668_0023895 3300046616 Bacteria 3480
93 Ga0495611_0001679 3300046648 Bacteria 10722
94 Ga0495611_0413109 3300046648 Bacteria 616
95 Ga0495625_0059429 3300046660 Bacteria 2713
96 Ga0495623_0285412 3300046679 Bacteria 917
97 Ga0495589_0076114 3300046794 Bacteria 1636
98 Ga0495660_0024776 3300046810 Bacteria 3415
99 Ga0495660_0063253 3300046810 Bacteria 1982
100 Ga0495636_0026151 3300047318 Bacteria 2373
101 Ga0495683_0049310 3300047323 Bacteria 2109
102 Ga0495683_0218674 3300047323 Bacteria 850
103 Ga0495687_001715 3300047443 Bacteria 19417
104 Ga0495687_003148 3300047443 Bacteria 12302
105 Ga0495677_0045510 3300047445 Bacteria 1610
106 Ga0495685_004701 3300047447 Bacteria 4429
107 Ga0495685_075562 3300047447 Bacteria 1125
108 Ga0501032_0007322 3300049569 Bacteria 8070
109 Ga0501032_0102459 3300049569 Bacteria 1897
110 Ga0501033_0325627 3300049570 Bacteria 1079
111 Ga0501034_0063293 3300049571 Bacteria 3713
112 Ga0501036_0006393 3300049572 Bacteria 9563
113 Ga0501038_1314181 3300049574 Bacteria 522
114 Ga0501039_0151938 3300049575 Bacteria 1819
115 Ga0501043_0041410 3300049579 Bacteria 3619
116 Ga0501047_0098258 3300049581 Bacteria 2806
117 Ga0501071_1486402 3300049587 Bacteria 523
118 Ga0501035_0012608 3300049822 Bacteria 7811
119 Ga0501044_0005366 3300049823 Bacteria 14242
120 nmdc:mga03n38_392178_c1 3300050490 Bacteria 763
121 nmdc:mga07m45_81262_c1 3300050496 Bacteria 1850
122 nmdc:mga05p37_1055031_c1 3300050507 Bacteria 857
123 nmdc:mga05p37_347369_c1 3300050507 Bacteria 1747
124 nmdc:mga09592_627512_c1 3300050508 Bacteria 919
125 nmdc:mga09592_668733_c1 3300050508 Bacteria 886
126 nmdc:mga0qj67_37143_c1 3300050509 Bacteria 2171
127 nmdc:mga0qj67_76848_c1 3300050509 Bacteria 2671
128 nmdc:mga06r32_124952_c1 3300050510 Bacteria 2540
129 nmdc:mga06r32_32522_c1 3300050510 Bacteria 4909
130 nmdc:mga0sz30_234815_c1 3300050516 Bacteria 816
131 Ga0495619_0256123 3300053085 Bacteria 1213
132 Ga0500558_140312 3300053106 Bacteria 911
133 Ga0500560_077366 3300053107 Bacteria 1102
134 Ga0500573_0010274 3300053140 Bacteria 5220
135 Ga0500589_045605 3300053147 Bacteria 2042
136 Ga0500589_058467 3300053147 Bacteria 1773
137 2643851131 2643221567 Bacteria 4163945
138 2644134917 2643221624 Bacteria 4384879
139 2644268441 2643221647 Bacteria 10741251
140 2905930038 2905926851 Bacteria 4423176
141 8001781947 8001781756 Bacteria 9586736
142 8056058962 8056054917 Bacteria 5736694
143 8056061907 8056060235 Bacteria 7259403
144 Ga0501084_0114229
145 ARcpr5oldR_c014505
146 Ga0070709_10852280
147 Ga0070714_100159065
148 Ga0070663_101263770
149 Ga0070681_10178101
150 Ga0070679_100003874
151 Ga0070679_100338452
152 Ga0070684_100815376
153 Ga0068856_100037038
154 Ga0075363_100301477
155 Ga0075428_100019882
156 Ga0075428_100422799
157 Ga0075428_100774654
158 Ga0075430_100030646
159 Ga0075431_100135336
160 Ga0075431_100177395
161 Ga0075431_100656296
162 Ga0075431_101779059
163 Ga0075434_101482537
164 Ga0075429_100924351
165 Ga0075429_101009323
166 Ga0099795_10063855
167 Ga0114129_10165536
168 Ga0114129_10369584
169 Ga0114129_12147634
170 Ga0157369_10280884
171 Ga0207699_10900900
172 Ga0207707_10272988
173 Ga0207652_10009513
174 Ga0207652_10278717
175 Ga0207664_10036779
176 Ga0207665_10797662
177 Ga0207668_11018026
178 Ga0207702_10367402
179 Ga0207641_10684232
180 Ga0307515_10082144
181 Ga0307515_10169728
182 Ga0307515_10261384
183 Ga0307515_10269947
184 Ga0307515_10310931
185 Ga0307511_10086780
186 Ga0316181_1123754
187 Ga0307513_10922670
188 Ga0307508_10281593
189 Ga0316576_10019380
190 Ga0307516_10024150
191 Ga0307516_10998022
192 Ga0307405_10160854
193 Ga0307405_10665103
194 Ga0307413_10202730
195 Ga0307416_100238770
196 Ga0307414_10321646
197 Ga0307411_10271020
198 Ga0307411_11330960
199 Ga0307415_100077860
200 Ga0307510_10458305
201 Ga0373951_0000003
202 Ga0439436_0033355
203 Ga0439439_0006291
204 Ga0439439_0032314
205 Ga0451797_1341208
206 Ga0451853_1050146
207 Ga0451853_1208180
208 Ga0439433_0058958
209 Ga0439449_0000353
210 Ga0439449_0051655
211 Ga0439457_010269
212 Ga0439462_0087989
213 Ga0450894_048446
214 Ga0450898_001681
215 Ga0450906_000922
216 Ga0466972_0018287
217 Ga0466965_0014774
218 Ga0466968_0431367
219 Ga0466960_0598769
220 Ga0495603_0001038
221 Ga0495629_0602913
222 Ga0495638_0098313
223 Ga0495651_0335657
224 Ga0495605_0034663
225 Ga0495585_0024043
226 Ga0495594_0000499
227 Ga0495607_0226491
228 Ga0495583_0016623
229 Ga0495583_0211708
230 Ga0495643_0001271
231 Ga0495648_0062771
232 Ga0495666_0000986
233 Ga0495597_0051396
234 Ga0495622_0001762
235 Ga0495668_0023895
236 Ga0495611_0001679
237 Ga0495611_0413109
238 Ga0495625_0059429
239 Ga0495623_0285412
240 Ga0495589_0076114
241 Ga0495660_0024776
242 Ga0495660_0063253
243 Ga0495636_0026151
244 Ga0495683_0049310
245 Ga0495683_0218674
246 Ga0495687_001715
247 Ga0495687_003148
248 Ga0495677_0045510
249 Ga0495685_004701
250 Ga0495685_075562
251 Ga0501032_0007322
252 Ga0501032_0102459
253 Ga0501033_0325627
254 Ga0501034_0063293
255 Ga0501036_0006393
256 Ga0501038_1314181
257 Ga0501039_0151938
258 Ga0501043_0041410
259 Ga0501047_0098258
260 Ga0501071_1486402
261 Ga0501035_0012608
262 Ga0501044_0005366
263 nmdc:mga03n38_392178_c1
264 nmdc:mga07m45_81262_c1
265 nmdc:mga05p37_1055031_c1
266 nmdc:mga05p37_347369_c1
267 nmdc:mga09592_627512_c1
268 nmdc:mga09592_668733_c1
269 nmdc:mga0qj67_37143_c1
270 nmdc:mga0qj67_76848_c1
271 nmdc:mga06r32_124952_c1
272 nmdc:mga06r32_32522_c1
273 nmdc:mga0sz30_234815_c1
274 Ga0495619_0256123
275 Ga0500558_140312
276 Ga0500560_077366
277 Ga0500573_0010274
278 Ga0500589_045605
279 Ga0500589_058467
280 2643851131
281 2644134917
282 2644268441
283 2905930038
284 8001781947
285 8056058962
286 8056061907

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13564

DoxX_2

DoxX-like family

32

131

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1msd-assembly1.cif.gz_A comparison of the crystal structures of genetically engineered human manganese superoxide dismutase and manganese superoxide dismutase from thermus thermophilus. differences in dimer-dimer interactions. 0.8532 73 114
7dgu-assembly1.cif.gz_A de novo designed protein h4a1r 0.6041 13 114
8a3k-assembly1.cif.gz_UNK x-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apcc-4 0.5989 9 114
2cj5-assembly1.cif.gz_A crystal structure of a cell wall invertase inhibitor from tobacco (ph 5.0) 0.5746 9 114
7dgu-assembly1.cif.gz_A de novo designed protein h4a1r 0.5632 13 114
ID Description Score Start End Superfamily
af_Q9UTL6_144_225_1.20.1280.20 Mainly Alpha;Up-down Bundle;Monooxygenase;HscB, C-terminal domain 0.9516 70 114 1.20.1280.20
3uo2A02 Mainly Alpha;Up-down Bundle;Monooxygenase;HscB, C-terminal domain 0.9505 70 114 1.20.1280.20
af_Q5APA2_72_237_1.20.1280.290 Mainly Alpha;Up-down Bundle;Monooxygenase; 0.8931 72 114 1.20.1280.290
4br6A01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Fe,Mn superoxide dismutase (SOD) domain 0.8824 74 118 1.10.287.990
4br6B01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Fe,Mn superoxide dismutase (SOD) domain 0.8816 74 118 1.10.287.990
ID Description Score Start End GO Terms
AF-A0A4R3IG05-F1-model_v4 deleted 0.9897 1 123
AF-A0A4R7AQL8-F1-model_v4 deleted 0.9892 1 123
AF-A0A369I0E2-F1-model_v4 DoxX family protein 0.9879 1 118 GO:0016020
AF-A0A4Q7KKK8-F1-model_v4 DoxX-like protein 0.9869 1 123 GO:0016020
AF-A0A2D8C2H8-F1-model_v4 DoxX family protein 0.9862 1 118 GO:0016020

Map