F189804

General Info

Members Datasets Scaffolds Average Seq Length
143 127 286 258

Family's Representative Sequence

Representative Sequence 3300047322|Ga0495680_0341031|Ga0495680_0341031_21_875
Length 284
Sequence VNDYLLEADGLVQEFPRPGAPPLRVLDGLELRVRRGEFAALIGPSGSGKSSFFNIVAGLDRPTGGVVRVDGRTAAGRTGPARHDQVSYMPQKDLLFPWRTVEDNAALGLEIQGTARKDARVLVGPLFAEFGLDGFEHVYPAQLSGGMRQRAALLRTVAMRRPVLLLDEPFGALDSLTRTQMQLWLAGMWQRHGWTILLVTHDIREAVFLADSVHVLTTRPGRVKARFDVGLPRPRTAQTFQLPEFARLELAVRDALRLDGSVPEDDPQRGAGGDAHGLRPTGAS

Samples

Sample ID Description Type Environment
1 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
57 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
58 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
71 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
72 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
73 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
74 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
78 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
79 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
80 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
81 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
82 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
83 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
84 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
85 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
93 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
96 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
97 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
100 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
104 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
105 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
106 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
107 2597489875 Mesorhizobium ciceri ca181 Isolate Unclassified
108 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
109 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
110 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
111 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
112 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
113 2841734538 Mesorhizobium sp. M6A.T.Cr.TU.016.01.1.1 Isolate Nodule
114 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
115 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
116 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
117 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
118 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
119 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
120 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
121 2922554459 Rhodococcus sp. 66b Isolate Unclassified
122 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
123 2932401849 Devosia sp. 2618 Isolate Rhizosphere
124 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
125 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
126 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
127 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 83.92
Metatranscriptomes 0
Isolates 16.08

Biome Distribution

Category Percentage (%)
Aerial Root 0.7
Bulb 0
Endosphere 7.69
Nodule 2.8
Rhizoplane 4.9
Rhizosphere 69.93
Stem 0
Stem Tuber 0
Unclassified 0.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495680_0341031 3300047322 Bacteria 1045
2 rootH2_10052664 3300003320 Bacteria 4444
3 rootH1_10021458 3300003323 Bacteria 2642
4 Ga0070671_100013165 3300005355 Bacteria 6664
5 Ga0070667_100356370 3300005367 Bacteria 1325
6 Ga0070714_100083500 3300005435 Bacteria 2785
7 Ga0070714_100171484 3300005435 Bacteria 1969
8 Ga0070713_100085532 3300005436 Bacteria 2702
9 Ga0070710_10191878 3300005437 Bacteria 1285
10 Ga0070701_10387761 3300005438 Bacteria 882
11 Ga0070705_100056414 3300005440 Bacteria 2313
12 Ga0070678_100016496 3300005456 Bacteria 4728
13 Ga0070678_100375519 3300005456 Bacteria 1229
14 Ga0070681_10164718 3300005458 Bacteria 2140
15 Ga0070679_100041974 3300005530 Bacteria 4555
16 Ga0070697_100179584 3300005536 Bacteria 1794
17 Ga0070686_100007555 3300005544 Bacteria 6070
18 Ga0070665_100011002 3300005548 Bacteria 9146
19 Ga0068866_10002976 3300005718 Bacteria 6987
20 Ga0068858_100000415 3300005842 Bacteria 44266
21 Ga0068860_100096563 3300005843 Bacteria 2817
22 Ga0075363_100007266 3300006048 Bacteria 5080
23 Ga0097621_100003910 3300006237 Bacteria 10322
24 Ga0075370_10091874 3300006353 Bacteria 1751
25 Ga0075430_100032788 3300006846 Bacteria 4408
26 Ga0075431_100047906 3300006847 Bacteria 4407
27 Ga0075433_10080962 3300006852 Bacteria 2863
28 Ga0075429_100153035 3300006880 Bacteria 2019
29 Ga0068865_100011974 3300006881 Bacteria 5447
30 Ga0111539_10010942 3300009094 Bacteria 11419
31 Ga0111539_10084405 3300009094 Bacteria 3734
32 Ga0105247_10001858 3300009101 Bacteria 14776
33 Ga0105247_10034845 3300009101 Bacteria 3066
34 Ga0114129_10031577 3300009147 Bacteria 7486
35 Ga0114129_10734326 3300009147 Bacteria 1266
36 Ga0105243_10025163 3300009148 Bacteria 4546
37 Ga0105248_10021328 3300009177 Bacteria 7179
38 Ga0157380_10657833 3300014326 Bacteria 1046
39 Ga0157379_10000736 3300014968 Bacteria 26464
40 Ga0157379_10006915 3300014968 Bacteria 9814
41 Ga0157376_10010867 3300014969 Bacteria 6684
42 Ga0207642_10017638 3300025899 Bacteria 2721
43 Ga0207710_10000012 3300025900 Bacteria 409603
44 Ga0207710_10008740 3300025900 Bacteria 4269
45 Ga0207699_10031492 3300025906 Bacteria 2978
46 Ga0207687_10160224 3300025927 Bacteria 1726
47 Ga0207700_10087583 3300025928 Bacteria 2449
48 Ga0207664_10065238 3300025929 Unclassified 2915
49 Ga0207664_10144638 3300025929 Bacteria 2015
50 Ga0207686_10005252 3300025934 Bacteria 6950
51 Ga0207709_10054936 3300025935 Bacteria 2458
52 Ga0207669_10079175 3300025937 Bacteria 2097
53 Ga0207711_10114941 3300025941 Bacteria 2397
54 Ga0207689_10264985 3300025942 Bacteria 1422
55 Ga0207703_10000029 3300026035 Bacteria 199952
56 Ga0207678_10051157 3300026067 Bacteria 3567
57 Ga0207683_10000286 3300026121 Bacteria 45296
58 Ga0268266_10039324 3300028379 Bacteria 4028
59 Ga0268264_10180003 3300028381 Bacteria 1919
60 Ga0265319_1029990 3300028563 Bacteria 1905
61 Ga0265338_10046027 3300028800 Bacteria 4003
62 Ga0265320_10070059 3300031240 Bacteria 1654
63 Ga0265340_10022230 3300031247 Bacteria 3244
64 Ga0307414_10196438 3300032004 Bacteria 1637
65 Ga0307507_10000240 3300033179 Bacteria 106042
66 Ga0439449_0015507 3300042007 Bacteria 2864
67 Ga0466972_0026288 3300044658 Bacteria 2884
68 Ga0466965_0017980 3300044683 Bacteria 3382
69 Ga0466961_0067977 3300044693 Bacteria 2263
70 Ga0466961_0152377 3300044693 Bacteria 1443
71 Ga0466963_0146632 3300044694 Bacteria 1638
72 Ga0466970_0070783 3300044765 Bacteria 1875
73 Ga0466957_0067737 3300044842 Bacteria 2203
74 Ga0466960_0000034 3300044901 Bacteria 45522
75 Ga0466960_0001063 3300044901 Bacteria 9837
76 Ga0466959_0034884 3300045049 Bacteria 3721
77 Ga0466959_0304721 3300045049 Bacteria 1091
78 Ga0466958_0222065 3300045836 Bacteria 1205
79 Ga0466967_0109066 3300045976 Bacteria 2541
80 Ga0466967_0213975 3300045976 Bacteria 1829
81 Ga0495580_0182063 3300046472 Bacteria 1451
82 Ga0495668_0000525 3300046616 Bacteria 47799
83 Ga0495658_0037903 3300046683 Bacteria 2667
84 Ga0495581_0106584 3300047315 Bacteria 1629
85 Ga0495676_0054272 3300047321 Bacteria 3187
86 Ga0495686_0003461 3300047472 Bacteria 13679
87 Ga0496102_0009581 3300048905 Bacteria 8329
88 Ga0496104_0183527 3300048907 Bacteria 2002
89 Ga0496107_0011969 3300048910 Bacteria 6055
90 Ga0496108_0413230 3300048911 Bacteria 1178
91 Ga0496111_0223946 3300048914 Bacteria 1397
92 Ga0496114_0072743 3300048917 Bacteria 2892
93 Ga0496114_0108459 3300048917 Bacteria 2376
94 Ga0496116_0062644 3300048919 Bacteria 2401
95 Ga0496119_0027494 3300048922 Bacteria 3907
96 Ga0496121_0004670 3300048924 Bacteria 18191
97 Ga0496124_0056713 3300048927 Bacteria 3303
98 Ga0496125_0001238 3300048928 Bacteria 38201
99 Ga0496125_0017776 3300048928 Bacteria 6767
100 Ga0496126_0048159 3300048929 Bacteria 3897
101 Ga0501037_0034156 3300049573 Bacteria 3754
102 Ga0501038_0375629 3300049574 Bacteria 1103
103 Ga0501047_0302601 3300049581 Bacteria 1441
104 Ga0501070_0210297 3300049586 Bacteria 1597
105 Ga0501074_0211714 3300049590 Bacteria 1381
106 nmdc:mga03683_77938_c1 3300050489 Bacteria 1426
107 nmdc:mga07m45_44143_c1 3300050496 Bacteria 2500
108 nmdc:mga05p37_60150_c1 3300050507 Bacteria 4678
109 nmdc:mga09592_79942_c1 3300050508 Bacteria 2784
110 nmdc:mga06r32_6379_c1 3300050510 Bacteria 10599
111 nmdc:mga08y16_69964_c1 3300050511 Bacteria 3658
112 nmdc:mga0a205_38777_c2 3300050515 Bacteria 3708
113 Ga0500635_0003849 3300053080 Bacteria 3810
114 Ga0500562_000264 3300053108 Bacteria 13167
115 Ga0500573_0250932 3300053140 Bacteria 912
116 Ga0500616_0000001 3300053153 Bacteria 1986011
117 Ga0500616_0000550 3300053153 Bacteria 46569
118 Ga0500616_0027361 3300053153 Bacteria 3148
119 Ga0500637_0025590 3300053178 Bacteria 3244
120 Ga0466962_0243162 3300061719 Bacteria 883
121 2513592057 2513237087 Bacteria 5817514
122 2566991286 2565956761 Bacteria 6601618
123 2597812192 2597489875 Bacteria 7010078
124 2738892096 2738541308 Bacteria 7020677
125 2739206679 2738543005 Bacteria 5278128
126 2739367064 2738543034 Bacteria 6084756
127 2744958625 2744054611 Bacteria 5611514
128 2816503882 2816332139 Bacteria 9138787
129 2841738183 2841734538 Bacteria 6784580
130 2878794079 2878788777 Bacteria 6567085
131 2904541757 2904535858 Bacteria 6308016
132 2904770793 2904765812 Bacteria 5369154
133 2904776290 2904770941 Bacteria 5580202
134 2908812785 2908811453 Bacteria 5478616
135 2919425130 2919420072 Bacteria 5390363
136 2919437761 2919432681 Bacteria 5390474
137 2922556165 2922554459 Bacteria 6683962
138 2928145893 2928142448 Bacteria 5288925
139 2932402143 2932401849 Bacteria 4262978
140 2937842584 2937836603 Bacteria 6811263
141 2974316533 2974315732 Bacteria 4602776
142 2984524707 2984523437 Bacteria 4508481
143 8054475403 8054472261 Bacteria 7464355
144 Ga0495680_0341031
145 rootH2_10052664
146 rootH1_10021458
147 Ga0070671_100013165
148 Ga0070667_100356370
149 Ga0070714_100083500
150 Ga0070714_100171484
151 Ga0070713_100085532
152 Ga0070710_10191878
153 Ga0070701_10387761
154 Ga0070705_100056414
155 Ga0070678_100016496
156 Ga0070678_100375519
157 Ga0070681_10164718
158 Ga0070679_100041974
159 Ga0070697_100179584
160 Ga0070686_100007555
161 Ga0070665_100011002
162 Ga0068866_10002976
163 Ga0068858_100000415
164 Ga0068860_100096563
165 Ga0075363_100007266
166 Ga0097621_100003910
167 Ga0075370_10091874
168 Ga0075430_100032788
169 Ga0075431_100047906
170 Ga0075433_10080962
171 Ga0075429_100153035
172 Ga0068865_100011974
173 Ga0111539_10010942
174 Ga0111539_10084405
175 Ga0105247_10001858
176 Ga0105247_10034845
177 Ga0114129_10031577
178 Ga0114129_10734326
179 Ga0105243_10025163
180 Ga0105248_10021328
181 Ga0157380_10657833
182 Ga0157379_10000736
183 Ga0157379_10006915
184 Ga0157376_10010867
185 Ga0207642_10017638
186 Ga0207710_10000012
187 Ga0207710_10008740
188 Ga0207699_10031492
189 Ga0207687_10160224
190 Ga0207700_10087583
191 Ga0207664_10065238
192 Ga0207664_10144638
193 Ga0207686_10005252
194 Ga0207709_10054936
195 Ga0207669_10079175
196 Ga0207711_10114941
197 Ga0207689_10264985
198 Ga0207703_10000029
199 Ga0207678_10051157
200 Ga0207683_10000286
201 Ga0268266_10039324
202 Ga0268264_10180003
203 Ga0265319_1029990
204 Ga0265338_10046027
205 Ga0265320_10070059
206 Ga0265340_10022230
207 Ga0307414_10196438
208 Ga0307507_10000240
209 Ga0439449_0015507
210 Ga0466972_0026288
211 Ga0466965_0017980
212 Ga0466961_0067977
213 Ga0466961_0152377
214 Ga0466963_0146632
215 Ga0466970_0070783
216 Ga0466957_0067737
217 Ga0466960_0000034
218 Ga0466960_0001063
219 Ga0466959_0034884
220 Ga0466959_0304721
221 Ga0466958_0222065
222 Ga0466967_0109066
223 Ga0466967_0213975
224 Ga0495580_0182063
225 Ga0495668_0000525
226 Ga0495658_0037903
227 Ga0495581_0106584
228 Ga0495676_0054272
229 Ga0495686_0003461
230 Ga0496102_0009581
231 Ga0496104_0183527
232 Ga0496107_0011969
233 Ga0496108_0413230
234 Ga0496111_0223946
235 Ga0496114_0072743
236 Ga0496114_0108459
237 Ga0496116_0062644
238 Ga0496119_0027494
239 Ga0496121_0004670
240 Ga0496124_0056713
241 Ga0496125_0001238
242 Ga0496125_0017776
243 Ga0496126_0048159
244 Ga0501037_0034156
245 Ga0501038_0375629
246 Ga0501047_0302601
247 Ga0501070_0210297
248 Ga0501074_0211714
249 nmdc:mga03683_77938_c1
250 nmdc:mga07m45_44143_c1
251 nmdc:mga05p37_60150_c1
252 nmdc:mga09592_79942_c1
253 nmdc:mga06r32_6379_c1
254 nmdc:mga08y16_69964_c1
255 nmdc:mga0a205_38777_c2
256 Ga0500635_0003849
257 Ga0500562_000264
258 Ga0500573_0250932
259 Ga0500616_0000001
260 Ga0500616_0000550
261 Ga0500616_0027361
262 Ga0500637_0025590
263 Ga0466962_0243162
264 2513592057
265 2566991286
266 2597812192
267 2738892096
268 2739206679
269 2739367064
270 2744958625
271 2816503882
272 2841738183
273 2878794079
274 2904541757
275 2904770793
276 2904776290
277 2908812785
278 2919425130
279 2919437761
280 2922556165
281 2928145893
282 2932402143
283 2937842584
284 2974316533
285 2984524707
286 8054475403

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

26

171

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5lj9-assembly3.cif.gz_C structure of the e. coli macb abc domain (c2221) 0.896 7 223
8ja7-assembly1.cif.gz_D cryo-em structure of mycobacterium tuberculosis lpqy-sugabc in complex with trehalose 0.8941 9 207
5xu1-assembly1.cif.gz_B structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8899 6 218
7w7a-assembly2.cif.gz_E heme exporter in complex with mn-containing protoporphyrin ix, mn-anomalous data 0.889 8 207
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8792 6 218
ID Description Score Start End Superfamily
af_Q57855_15_256_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9256 8 245 3.40.50.300
af_Q57855_15_256_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9072 8 245 3.40.50.300
af_Q47538_1_237_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9017 9 237 3.40.50.300
af_P0AAI1_7_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8976 6 222 3.40.50.300
af_P77737_9_333_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8898 6 209 3.40.50.300
ID Description Score Start End GO Terms
AF-T0CVC9-F1-model_v4 deleted 0.9408 7 77
AF-A0A6A8AKN4-F1-model_v4 ATP-binding cassette domain-containing protein 0.9162 6 187 GO:0005524
GO:0016887
AF-H8FG51-F1-model_v4 deleted 0.9135 7 194
AF-A0A7C1E355-F1-model_v4 ABC transporter ATP-binding protein 0.9123 4 225 GO:0005524
GO:0016887
AF-A0A6I1NNV7-F1-model_v4 ATP-binding cassette domain-containing protein 0.9085 45 183 GO:0005524
GO:0016887

Map