F188039

General Info

Members Datasets Scaffolds Average Seq Length
143 102 286 355

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100022295|Ga0070708_1000222952
Length 382
Sequence MEEQTKRLENPVIRISDFDYSLPHELIAQTPIEPRDASRLLVLNRGNGTIEHRHFRDIGAYLRPGDLLIANQSRVLPARLLGHRAETGGAVEVLLLAERPDLGPDYWETLVRPGRRLREGSHITFGDEDGTKQTLQAEILQRTEAGGRLVRFSAVDARNAESPGAEQGHDKSRPHVSARELIERLGRMPLPPYIHEALTDPERYQTVYARIMGSAAAPTAGLHFTPRLLEQLRQQGVRIGFVTLHVGLDTFRPIESEDIREHKMHSEEIDLDAPTAELINETRRAGGRVVAVGTTAVRVLESVAGFHEGRIEPYHGATRLFITPGYRFQAVDAMITNFHLPRSTLLLLVSAFASKALIEKAYQEAIRERYRFYSFGDAMLIL

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
38 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
55 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
56 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
60 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
63 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
64 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
72 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
73 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
78 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
79 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
87 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
88 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
96 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
97 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
98 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
99 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
100 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
101 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
102 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.6
Metatranscriptomes 0.7
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.1
Nodule 0
Rhizoplane 2.8
Rhizosphere 88.11
Stem 0
Stem Tuber 0
Unclassified 2.8

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100022295 3300005445 Bacteria 5369
2 Ga0070683_100000076 3300005329 Bacteria 67549
3 Ga0070683_100008313 3300005329 Bacteria 8820
4 Ga0070683_100109807 3300005329 Bacteria 2601
5 Ga0070691_10010261 3300005341 Bacteria 4274
6 Ga0070713_100000881 3300005436 Bacteria 19233
7 Ga0070713_100425326 3300005436 Bacteria 1244
8 Ga0070708_100003656 3300005445 Bacteria 12064
9 Ga0070706_100000377 3300005467 Bacteria 53406
10 Ga0070706_100004136 3300005467 Bacteria 14115
11 Ga0070706_100348228 3300005467 Bacteria 1381
12 Ga0070707_100001292 3300005468 Bacteria 24644
13 Ga0070707_100044799 3300005468 Bacteria 4236
14 Ga0070707_100047389 3300005468 Bacteria 4115
15 Ga0070707_100068185 3300005468 Bacteria 3423
16 Ga0070698_100008228 3300005471 Bacteria 11283
17 Ga0070698_100171305 3300005471 Bacteria 2112
18 Ga0070698_100226357 3300005471 Unclassified 1803
19 Ga0070699_100008046 3300005518 Bacteria 9152
20 Ga0070699_100010239 3300005518 Bacteria 8112
21 Ga0070699_100114991 3300005518 Bacteria 2364
22 Ga0070699_100191970 3300005518 Bacteria 1815
23 Ga0070684_100002156 3300005535 Bacteria 14531
24 Ga0070697_100165056 3300005536 Bacteria 1872
25 Ga0070665_100165566 3300005548 Bacteria 2213
26 Ga0070665_100184471 3300005548 Bacteria 2087
27 Ga0068855_100598698 3300005563 Bacteria 1189
28 Ga0070664_100008367 3300005564 Bacteria 8363
29 Ga0068857_100013165 3300005577 Bacteria 7208
30 Ga0068856_100000723 3300005614 Bacteria 35860
31 Ga0068861_100000888 3300005719 Bacteria 18145
32 Ga0081539_10007938 3300005985 Bacteria 9448
33 Ga0070717_10029943 3300006028 Bacteria 4372
34 Ga0075428_100001619 3300006844 Bacteria 24070
35 Ga0075430_100011031 3300006846 Bacteria 7657
36 Ga0075431_100003357 3300006847 Bacteria 15518
37 Ga0075434_100398073 3300006871 Bacteria 1398
38 Ga0075429_100003879 3300006880 Bacteria 12774
39 Ga0075436_100000508 3300006914 Bacteria 25170
40 Ga0105240_10000958 3300009093 Bacteria 51520
41 Ga0105240_10401889 3300009093 Bacteria 1543
42 Ga0105240_10415135 3300009093 Bacteria 1513
43 Ga0111539_10363879 3300009094 Bacteria 1683
44 Ga0114129_10054710 3300009147 Bacteria 5595
45 Ga0105237_10242322 3300009545 Bacteria 1804
46 Ga0105238_10001731 3300009551 Bacteria 21968
47 Ga0105239_10031074 3300010375 Bacteria 5875
48 Ga0105239_10031786 3300010375 Bacteria 5800
49 Ga0157370_10266440 3300013104 Bacteria 1583
50 Ga0157369_10005872 3300013105 Bacteria 14261
51 Ga0157375_10179701 3300013308 Bacteria 2267
52 Ga0163163_10415343 3300014325 Bacteria 1404
53 Ga0213874_10050445 3300021377 Bacteria 1275
54 Ga0213876_10164411 3300021384 Bacteria 1181
55 Ga0213871_10004319 3300021441 Bacteria 2833
56 Ga0224712_10019569 3300022467 Bacteria 2285
57 Ga0207684_10001566 3300025910 Bacteria 24446
58 Ga0207684_10005314 3300025910 Bacteria 11913
59 Ga0207695_10000697 3300025913 Bacteria 65760
60 Ga0207646_10001954 3300025922 Bacteria 24707
61 Ga0207646_10010906 3300025922 Bacteria 8830
62 Ga0207646_10225176 3300025922 Unclassified 1694
63 Ga0207681_10120157 3300025923 Bacteria 1926
64 Ga0207694_10002909 3300025924 Bacteria 13780
65 Ga0207700_10104926 3300025928 Bacteria 2262
66 Ga0207700_10127866 3300025928 Bacteria 2070
67 Ga0207664_10003418 3300025929 Bacteria 10582
68 Ga0207661_10068849 3300025944 Bacteria 2883
69 Ga0207661_10071052 3300025944 Bacteria 2843
70 Ga0207661_10078091 3300025944 Bacteria 2724
71 Ga0207679_10082804 3300025945 Bacteria 2457
72 Ga0207708_10206841 3300026075 Bacteria 1568
73 Ga0207702_10005031 3300026078 Bacteria 11615
74 Ga0207702_10065149 3300026078 Bacteria 3120
75 Ga0207674_10005523 3300026116 Bacteria 15018
76 Ga0207674_10018319 3300026116 Bacteria 7613
77 Ga0207675_100006224 3300026118 Bacteria 11332
78 Ga0268266_10003490 3300028379 Bacteria 15653
79 Ga0268266_10300063 3300028379 Bacteria 1498
80 Ga0268265_10176175 3300028380 Bacteria 1833
81 Ga0265323_10058640 3300028653 Bacteria 1344
82 Ga0265320_10032968 3300031240 Bacteria 2648
83 Ga0265329_10011104 3300031242 Bacteria 3280
84 Ga0265331_10040517 3300031250 Bacteria 2265
85 Ga0265316_10000021 3300031344 Bacteria 185946
86 Ga0316575_10000431 3300031665 Bacteria 11944
87 Ga0316575_10053110 3300031665 Bacteria 1614
88 Ga0316579_10006060 3300031691 Bacteria 4914
89 Ga0307409_100170496 3300031995 Bacteria 1915
90 Ga0373954_0001170 3300035118 Bacteria 10556
91 Ga0373956_0000102 3300035119 Bacteria 29419
92 Ga0373956_0092671 3300035119 Bacteria 1395
93 Ga0373933_0005316 3300035724 Bacteria 7017
94 Ga0316582_0041559 3300036647 Bacteria 2874
95 Ga0395899_0032746 3300037312 Bacteria 3907
96 Ga0436364_0467880 3300037853 Bacteria 4004
97 Ga0436364_1050953 3300037853 Bacteria 4067
98 Ga0400489_36940 3300039093 Bacteria 24345
99 Ga0436365_0485526 3300039437 Bacteria 1810
100 Ga0436365_1802520 3300039437 Bacteria 2066
101 Ga0436360_0419080 3300039438 Bacteria 1128
102 Ga0436360_0485331 3300039438 Bacteria 13032
103 Ga0436361_0019327 3300039447 Bacteria 1511
104 Ga0436363_0843482 3300039450 Bacteria 5913
105 Ga0436363_1228620 3300039450 Bacteria 2152
106 Ga0466966_0190742 3300044684 Bacteria 1242
107 Ga0453684_0000095 3300044712 Bacteria 378681
108 Ga0453684_0274950 3300044712 Unclassified 1923
109 Ga0453684_0654842 3300044712 Unclassified 1146
110 Ga0466959_0238324 3300045049 Bacteria 1257
111 Ga0451576_0000243 3300045051 Bacteria 133634
112 Ga0451576_0102320 3300045051 Bacteria 2980
113 Ga0495632_0052468 3300046519 Bacteria 2005
114 Ga0496112_0190141 3300048915 Bacteria 2015
115 Ga0496112_0438954 3300048915 Bacteria 1243
116 Ga0496113_0161073 3300048916 Bacteria 1774
117 Ga0496115_0090850 3300048918 Bacteria 2495
118 Ga0496126_0086808 3300048929 Bacteria 2758
119 Ga0501034_0270055 3300049571 Bacteria 1642
120 Ga0501037_0005505 3300049573 Bacteria 9233
121 Ga0501038_0113789 3300049574 Bacteria 2239
122 Ga0501073_0006254 3300049589 Bacteria 8880
123 Ga0501073_0062438 3300049589 Bacteria 2599
124 Ga0501080_0148799 3300049742 Bacteria 2165
125 Ga0501081_0191361 3300049743 Bacteria 1482
126 Ga0501044_0014816 3300049823 Bacteria 8405
127 Ga0501045_0239849 3300049824 Bacteria 1350
128 nmdc:mga05p37_59793_c1 3300050507 Bacteria 4692
129 nmdc:mga09592_6008_c1 3300050508 Bacteria 9903
130 nmdc:mga0qj67_18735_c1 3300050509 Bacteria 5278
131 nmdc:mga06r32_10487_c1 3300050510 Bacteria 8357
132 nmdc:mga0n895_369478_c1 3300050512 Bacteria 1452
133 nmdc:mga08x19_371_c1 3300050514 Bacteria 31663
134 Ga0495601_0055349 3300053077 Bacteria 2512
135 Ga0495601_0059335 3300053077 Bacteria 2426
136 Ga0495601_0228265 3300053077 Bacteria 1216
137 Ga0495619_0077431 3300053085 Bacteria 2234
138 Ga0495619_0164591 3300053085 Bacteria 1532
139 Ga0500595_012494 3300053119 Bacteria 3283
140 Ga0500588_0012468 3300053146 Bacteria 2109
141 Ga0500637_0003586 3300053178 Bacteria 7201
142 Ga0501084_0000293 3300054114 Bacteria 37991
143 2919139823 2919138771 Bacteria 5281312
144 Ga0070708_100022295
145 Ga0070683_100000076
146 Ga0070683_100008313
147 Ga0070683_100109807
148 Ga0070691_10010261
149 Ga0070713_100000881
150 Ga0070713_100425326
151 Ga0070708_100003656
152 Ga0070706_100000377
153 Ga0070706_100004136
154 Ga0070706_100348228
155 Ga0070707_100001292
156 Ga0070707_100044799
157 Ga0070707_100047389
158 Ga0070707_100068185
159 Ga0070698_100008228
160 Ga0070698_100171305
161 Ga0070698_100226357
162 Ga0070699_100008046
163 Ga0070699_100010239
164 Ga0070699_100114991
165 Ga0070699_100191970
166 Ga0070684_100002156
167 Ga0070697_100165056
168 Ga0070665_100165566
169 Ga0070665_100184471
170 Ga0068855_100598698
171 Ga0070664_100008367
172 Ga0068857_100013165
173 Ga0068856_100000723
174 Ga0068861_100000888
175 Ga0081539_10007938
176 Ga0070717_10029943
177 Ga0075428_100001619
178 Ga0075430_100011031
179 Ga0075431_100003357
180 Ga0075434_100398073
181 Ga0075429_100003879
182 Ga0075436_100000508
183 Ga0105240_10000958
184 Ga0105240_10401889
185 Ga0105240_10415135
186 Ga0111539_10363879
187 Ga0114129_10054710
188 Ga0105237_10242322
189 Ga0105238_10001731
190 Ga0105239_10031074
191 Ga0105239_10031786
192 Ga0157370_10266440
193 Ga0157369_10005872
194 Ga0157375_10179701
195 Ga0163163_10415343
196 Ga0213874_10050445
197 Ga0213876_10164411
198 Ga0213871_10004319
199 Ga0224712_10019569
200 Ga0207684_10001566
201 Ga0207684_10005314
202 Ga0207695_10000697
203 Ga0207646_10001954
204 Ga0207646_10010906
205 Ga0207646_10225176
206 Ga0207681_10120157
207 Ga0207694_10002909
208 Ga0207700_10104926
209 Ga0207700_10127866
210 Ga0207664_10003418
211 Ga0207661_10068849
212 Ga0207661_10071052
213 Ga0207661_10078091
214 Ga0207679_10082804
215 Ga0207708_10206841
216 Ga0207702_10005031
217 Ga0207702_10065149
218 Ga0207674_10005523
219 Ga0207674_10018319
220 Ga0207675_100006224
221 Ga0268266_10003490
222 Ga0268266_10300063
223 Ga0268265_10176175
224 Ga0265323_10058640
225 Ga0265320_10032968
226 Ga0265329_10011104
227 Ga0265331_10040517
228 Ga0265316_10000021
229 Ga0316575_10000431
230 Ga0316575_10053110
231 Ga0316579_10006060
232 Ga0307409_100170496
233 Ga0373954_0001170
234 Ga0373956_0000102
235 Ga0373956_0092671
236 Ga0373933_0005316
237 Ga0316582_0041559
238 Ga0395899_0032746
239 Ga0436364_0467880
240 Ga0436364_1050953
241 Ga0400489_36940
242 Ga0436365_0485526
243 Ga0436365_1802520
244 Ga0436360_0419080
245 Ga0436360_0485331
246 Ga0436361_0019327
247 Ga0436363_0843482
248 Ga0436363_1228620
249 Ga0466966_0190742
250 Ga0453684_0000095
251 Ga0453684_0274950
252 Ga0453684_0654842
253 Ga0466959_0238324
254 Ga0451576_0000243
255 Ga0451576_0102320
256 Ga0495632_0052468
257 Ga0496112_0190141
258 Ga0496112_0438954
259 Ga0496113_0161073
260 Ga0496115_0090850
261 Ga0496126_0086808
262 Ga0501034_0270055
263 Ga0501037_0005505
264 Ga0501038_0113789
265 Ga0501073_0006254
266 Ga0501073_0062438
267 Ga0501080_0148799
268 Ga0501081_0191361
269 Ga0501044_0014816
270 Ga0501045_0239849
271 nmdc:mga05p37_59793_c1
272 nmdc:mga09592_6008_c1
273 nmdc:mga0qj67_18735_c1
274 nmdc:mga06r32_10487_c1
275 nmdc:mga0n895_369478_c1
276 nmdc:mga08x19_371_c1
277 Ga0495601_0055349
278 Ga0495601_0059335
279 Ga0495601_0228265
280 Ga0495619_0077431
281 Ga0495619_0164591
282 Ga0500595_012494
283 Ga0500588_0012468
284 Ga0500637_0003586
285 Ga0501084_0000293
286 2919139823

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02547

Queuosine_synth

Queuosine biosynthesis protein

15

381

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6xlh-assembly1.cif.gz_C asymmetric hydrolysis state of hsc82 in complex with aha1 bound with adp and atpgammas 0.7876 105 141
2o3g-assembly1.cif.gz_A structural genomics, the crystal structure of a conserved putative domain from neisseria meningitidis mc58 0.7341 106 139
1wdi-assembly1.cif.gz_A crystal structure of tt0907 from thermus thermophilus hb8 0.7094 3 358
1wdi-assembly1.cif.gz_A crystal structure of tt0907 from thermus thermophilus hb8 0.7024 3 358
1vky-assembly1.cif.gz_A crystal structure of s-adenosylmethionine trna ribosyltransferase (tm0574) from thermotoga maritima at 2.00 a resolution 0.6997 5 358
ID Description Score Start End Superfamily
1vkyA01 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.9503 5 358 3.40.1780.10
1vkyA01 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.9411 5 358 3.40.1780.10
1vkyA02 Mainly Beta;Beta Barrel;Thrombin, subunit H;QueA-like 0.8748 64 135 2.40.10.240
1yy3B02 Mainly Beta;Beta Barrel;Thrombin, subunit H;QueA-like 0.8474 64 157 2.40.10.240
af_P0A7F9_64_163_3.40.1780.10 Alpha Beta;3-Layer(aba) Sandwich;QueA-like;QueA-like 0.8384 64 167 3.40.1780.10
ID Description Score Start End GO Terms
AF-Q88V04-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9883 1 358 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-Q03R37-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9837 1 358 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A352DNP5-F1-model_v4 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA 0.9822 1 223 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-Q88V04-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9798 1 358 GO:0002099
GO:0005737
GO:0008616
GO:0051075
AF-A0A2N1Q2A0-F1-model_v4 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) 0.9794 1 357 GO:0002099
GO:0005737
GO:0008616
GO:0051075

Map