F185925

General Info

Members Datasets Scaffolds Average Seq Length
142 112 284 253

Family's Representative Sequence

Representative Sequence 3300025931|Ga0207644_10136806|Ga0207644_101368062
Length 285
Sequence MITTEPRLLQEVAFHPYPLLFVTISGAHLYGFPSPDSDYDLRGVHVLPVREVVGLDPGRETVERSGVREGLEIDLVTHDAKKFFALMLRKNGYVLEQLFSPLVVKTSPQHEELKAIAAGCITRHHAHHYLGFAETQWQLFQKESPRRVKPLLYVYRVLLTGIHLMRTGVVEANLLKLNEQFRLPYVGELVARKLAGPEQSTLDASDFSFHEAEYARLRAELEQAYEASALPEGPSAKPTLTDSCGCGCRSGIASRGLRQDVEWGAISCLSRQPNSTRCPCSRCST

Samples

Sample ID Description Type Environment
1 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
11 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
69 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
75 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
83 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
89 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
90 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
93 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
104 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
107 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
110 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
111 2836160341 Unclassified Planctomycetes Bin 134 Isolate Unclassified
112 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.18
Metatranscriptomes 0
Isolates 2.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.41
Nodule 0
Rhizoplane 0.7
Rhizosphere 91.55
Stem 0
Stem Tuber 0
Unclassified 13.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207644_10136806 3300025931 Bacteria 1882
2 rootH1_10148657 3300003323 Bacteria 2106
3 Ga0070670_100443882 3300005331 Bacteria 1149
4 Ga0070675_100076971 3300005354 Bacteria 2776
5 Ga0070675_100190941 3300005354 Bacteria 1775
6 Ga0070673_100044549 3300005364 Bacteria 3436
7 Ga0070678_100222976 3300005456 Bacteria 1568
8 Ga0070678_100568970 3300005456 Bacteria 1008
9 Ga0070698_100294611 3300005471 Unclassified 1553
10 Ga0070699_100467812 3300005518 Bacteria 1144
11 Ga0070684_100558921 3300005535 Bacteria 1062
12 Ga0070672_100685599 3300005543 Bacteria 896
13 Ga0070664_100226244 3300005564 Bacteria 1675
14 Ga0068857_100275194 3300005577 Bacteria 1548
15 Ga0068856_100051600 3300005614 Bacteria 4055
16 Ga0068858_100191019 3300005842 Bacteria 1935
17 Ga0068858_100379529 3300005842 Bacteria 1356
18 Ga0068860_100188533 3300005843 Unclassified 1995
19 Ga0068860_100194811 3300005843 Bacteria 1962
20 Ga0081539_10009180 3300005985 Bacteria 8338
21 Ga0070717_10110751 3300006028 Bacteria 2342
22 Ga0097621_100025782 3300006237 Bacteria 4603
23 Ga0097621_100069996 3300006237 Bacteria 2897
24 Ga0097621_100235040 3300006237 Bacteria 1601
25 Ga0068871_100112973 3300006358 Bacteria 2287
26 Ga0075430_100015446 3300006846 Bacteria 6500
27 Ga0075430_100692186 3300006846 Bacteria 840
28 Ga0075431_100067895 3300006847 Bacteria 3680
29 Ga0075429_100061978 3300006880 Bacteria 3259
30 Ga0075429_100442192 3300006880 Bacteria 1139
31 Ga0105240_10035200 3300009093 Bacteria 6454
32 Ga0105240_10141520 3300009093 Bacteria 2876
33 Ga0105245_10008529 3300009098 Bacteria 8940
34 Ga0105245_10504553 3300009098 Unclassified 1226
35 Ga0114129_10373299 3300009147 Unclassified 1885
36 Ga0105243_10313993 3300009148 Bacteria 1425
37 Ga0105238_10129681 3300009551 Bacteria 2500
38 Ga0105238_10443457 3300009551 Unclassified 1295
39 Ga0105249_10215462 3300009553 Unclassified 1887
40 Ga0099796_10044766 3300010159 Unclassified 1513
41 Ga0105239_10348628 3300010375 Unclassified 1671
42 Ga0157369_10179468 3300013105 Unclassified 2228
43 Ga0163162_10507991 3300013306 Bacteria 1335
44 Ga0157372_10372858 3300013307 Unclassified 1663
45 Ga0157379_10291659 3300014968 Bacteria 1486
46 Ga0157376_10000058 3300014969 Bacteria 97710
47 Ga0213876_10051460 3300021384 Bacteria 2177
48 Ga0207646_10058670 3300025922 Unclassified 3438
49 Ga0207694_10087590 3300025924 Bacteria 2453
50 Ga0207659_10091196 3300025926 Bacteria 2276
51 Ga0207659_10219148 3300025926 Bacteria 1529
52 Ga0207687_10086342 3300025927 Bacteria 2278
53 Ga0207700_10292300 3300025928 Bacteria 1405
54 Ga0207686_10001173 3300025934 Bacteria 15151
55 Ga0207691_10028980 3300025940 Bacteria 5181
56 Ga0207679_10056863 3300025945 Bacteria 2891
57 Ga0207679_10137028 3300025945 Bacteria 1972
58 Ga0207651_10078585 3300025960 Bacteria 2367
59 Ga0207651_10434746 3300025960 Bacteria 1123
60 Ga0207703_10055761 3300026035 Bacteria 3216
61 Ga0207703_10344974 3300026035 Bacteria 1370
62 Ga0207703_10524216 3300026035 Unclassified 1115
63 Ga0207702_10001435 3300026078 Bacteria 23701
64 Ga0207648_10098848 3300026089 Unclassified 2555
65 Ga0207674_10270040 3300026116 Bacteria 1648
66 Ga0207683_10056457 3300026121 Bacteria 3444
67 Ga0268264_10153195 3300028381 Unclassified 2069
68 Ga0268264_10168512 3300028381 Bacteria 1979
69 Ga0265338_10007721 3300028800 Bacteria 13240
70 Ga0265338_10175365 3300028800 Bacteria 1639
71 Ga0265332_10030800 3300031238 Bacteria 2342
72 Ga0265332_10117007 3300031238 Bacteria 1120
73 Ga0265328_10043437 3300031239 Bacteria 1653
74 Ga0265325_10058626 3300031241 Bacteria 1960
75 Ga0265339_10016109 3300031249 Bacteria 4465
76 Ga0265331_10000105 3300031250 Bacteria 114751
77 Ga0265316_10094802 3300031344 Bacteria 2274
78 Ga0265313_10001547 3300031595 Bacteria 21374
79 Ga0265314_10000240 3300031711 Bacteria 80835
80 Ga0265314_10001177 3300031711 Bacteria 30027
81 Ga0265314_10005716 3300031711 Bacteria 11153
82 Ga0265342_10007225 3300031712 Bacteria 8166
83 Ga0307405_10113785 3300031731 Bacteria 1838
84 Ga0307413_10077820 3300031824 Bacteria 2114
85 Ga0307406_10082648 3300031901 Bacteria 2140
86 Ga0307407_10207746 3300031903 Bacteria 1316
87 Ga0307409_100062418 3300031995 Bacteria 2917
88 Ga0307416_100294067 3300032002 Bacteria 1610
89 Ga0307414_10382881 3300032004 Bacteria 1217
90 Ga0307411_10161240 3300032005 Bacteria 1680
91 Ga0373927_0009939 3300035695 Bacteria 6375
92 Ga0373937_0041746 3300036401 Unclassified 4185
93 Ga0373937_0288557 3300036401 Bacteria 1550
94 Ga0373925_0435615 3300037068 Bacteria 1072
95 Ga0395900_0417969 3300037418 Bacteria 1302
96 Ga0395898_0190443 3300037466 Bacteria 1960
97 Ga0436364_1443830 3300037853 Unclassified 1128
98 Ga0395901_0102732 3300038443 Bacteria 3000
99 Ga0400489_43990 3300039093 Bacteria 47555
100 Ga0400489_68548 3300039093 Bacteria 2919
101 Ga0436365_1673488 3300039437 Bacteria 7294
102 Ga0451577_0220144 3300042876 Bacteria 1716
103 Ga0466972_0033985 3300044658 Bacteria 2500
104 Ga0466963_0289364 3300044694 Bacteria 1152
105 Ga0453684_0008870 3300044712 Bacteria 17816
106 Ga0466968_0004141 3300044735 Bacteria 5400
107 Ga0466960_0026940 3300044901 Bacteria 2616
108 Ga0451576_0049429 3300045051 Bacteria 4413
109 Ga0495641_0041632 3300046461 Bacteria 2133
110 Ga0495580_0002046 3300046472 Bacteria 17702
111 Ga0495582_0000324 3300046473 Bacteria 26135
112 Ga0495657_0079475 3300046675 Bacteria 2124
113 Ga0495658_0061792 3300046683 Unclassified 2152
114 Ga0495674_0629260 3300047319 Bacteria 848
115 Ga0495615_0039528 3300048090 Bacteria 1171
116 Ga0496115_0096273 3300048918 Unclassified 2423
117 Ga0501033_0273413 3300049570 Bacteria 1194
118 Ga0501034_0029746 3300049571 Bacteria 5553
119 Ga0501034_0598788 3300049571 Bacteria 1008
120 Ga0501037_0010134 3300049573 Bacteria 6917
121 Ga0501046_0000809 3300049580 Bacteria 30408
122 Ga0501046_0205947 3300049580 Unclassified 1462
123 Ga0501047_0054190 3300049581 Bacteria 3879
124 Ga0501047_0093134 3300049581 Bacteria 2892
125 Ga0501047_0246912 3300049581 Bacteria 1634
126 Ga0501070_0085541 3300049586 Bacteria 2611
127 Ga0501070_0109276 3300049586 Bacteria 2285
128 Ga0501080_0034505 3300049742 Bacteria 4724
129 Ga0501083_0042881 3300049744 Bacteria 3066
130 Ga0501044_0000209 3300049823 Bacteria 74537
131 Ga0501044_0002993 3300049823 Bacteria 19139
132 nmdc:mga03683_27021_c2 3300050489 Bacteria 1474
133 nmdc:mga03n38_13433_c1 3300050490 Bacteria 3110
134 nmdc:mga09592_716175_c1 3300050508 Bacteria 851
135 nmdc:mga09592_919605_c1 3300050508 Bacteria 734
136 nmdc:mga0qj67_651687_c1 3300050509 Bacteria 840
137 nmdc:mga0rr50_443087_c1 3300050513 Bacteria 1100
138 Ga0501082_0070611 3300060353 Bacteria 3007
139 2526061227 2524614857 Bacteria 4146328
140 2740065137 2739367875 Bacteria 4157290
141 2836163655 2836160341 Unclassified 5867367
142 2913941528 2913939268 Bacteria 8559644
143 Ga0207644_10136806
144 rootH1_10148657
145 Ga0070670_100443882
146 Ga0070675_100076971
147 Ga0070675_100190941
148 Ga0070673_100044549
149 Ga0070678_100222976
150 Ga0070678_100568970
151 Ga0070698_100294611
152 Ga0070699_100467812
153 Ga0070684_100558921
154 Ga0070672_100685599
155 Ga0070664_100226244
156 Ga0068857_100275194
157 Ga0068856_100051600
158 Ga0068858_100191019
159 Ga0068858_100379529
160 Ga0068860_100188533
161 Ga0068860_100194811
162 Ga0081539_10009180
163 Ga0070717_10110751
164 Ga0097621_100025782
165 Ga0097621_100069996
166 Ga0097621_100235040
167 Ga0068871_100112973
168 Ga0075430_100015446
169 Ga0075430_100692186
170 Ga0075431_100067895
171 Ga0075429_100061978
172 Ga0075429_100442192
173 Ga0105240_10035200
174 Ga0105240_10141520
175 Ga0105245_10008529
176 Ga0105245_10504553
177 Ga0114129_10373299
178 Ga0105243_10313993
179 Ga0105238_10129681
180 Ga0105238_10443457
181 Ga0105249_10215462
182 Ga0099796_10044766
183 Ga0105239_10348628
184 Ga0157369_10179468
185 Ga0163162_10507991
186 Ga0157372_10372858
187 Ga0157379_10291659
188 Ga0157376_10000058
189 Ga0213876_10051460
190 Ga0207646_10058670
191 Ga0207694_10087590
192 Ga0207659_10091196
193 Ga0207659_10219148
194 Ga0207687_10086342
195 Ga0207700_10292300
196 Ga0207686_10001173
197 Ga0207691_10028980
198 Ga0207679_10056863
199 Ga0207679_10137028
200 Ga0207651_10078585
201 Ga0207651_10434746
202 Ga0207703_10055761
203 Ga0207703_10344974
204 Ga0207703_10524216
205 Ga0207702_10001435
206 Ga0207648_10098848
207 Ga0207674_10270040
208 Ga0207683_10056457
209 Ga0268264_10153195
210 Ga0268264_10168512
211 Ga0265338_10007721
212 Ga0265338_10175365
213 Ga0265332_10030800
214 Ga0265332_10117007
215 Ga0265328_10043437
216 Ga0265325_10058626
217 Ga0265339_10016109
218 Ga0265331_10000105
219 Ga0265316_10094802
220 Ga0265313_10001547
221 Ga0265314_10000240
222 Ga0265314_10001177
223 Ga0265314_10005716
224 Ga0265342_10007225
225 Ga0307405_10113785
226 Ga0307413_10077820
227 Ga0307406_10082648
228 Ga0307407_10207746
229 Ga0307409_100062418
230 Ga0307416_100294067
231 Ga0307414_10382881
232 Ga0307411_10161240
233 Ga0373927_0009939
234 Ga0373937_0041746
235 Ga0373937_0288557
236 Ga0373925_0435615
237 Ga0395900_0417969
238 Ga0395898_0190443
239 Ga0436364_1443830
240 Ga0395901_0102732
241 Ga0400489_43990
242 Ga0400489_68548
243 Ga0436365_1673488
244 Ga0451577_0220144
245 Ga0466972_0033985
246 Ga0466963_0289364
247 Ga0453684_0008870
248 Ga0466968_0004141
249 Ga0466960_0026940
250 Ga0451576_0049429
251 Ga0495641_0041632
252 Ga0495580_0002046
253 Ga0495582_0000324
254 Ga0495657_0079475
255 Ga0495658_0061792
256 Ga0495674_0629260
257 Ga0495615_0039528
258 Ga0496115_0096273
259 Ga0501033_0273413
260 Ga0501034_0029746
261 Ga0501034_0598788
262 Ga0501037_0010134
263 Ga0501046_0000809
264 Ga0501046_0205947
265 Ga0501047_0054190
266 Ga0501047_0093134
267 Ga0501047_0246912
268 Ga0501070_0085541
269 Ga0501070_0109276
270 Ga0501080_0034505
271 Ga0501083_0042881
272 Ga0501044_0000209
273 Ga0501044_0002993
274 nmdc:mga03683_27021_c2
275 nmdc:mga03n38_13433_c1
276 nmdc:mga09592_716175_c1
277 nmdc:mga09592_919605_c1
278 nmdc:mga0qj67_651687_c1
279 nmdc:mga0rr50_443087_c1
280 Ga0501082_0070611
281 2526061227
282 2740065137
283 2836163655
284 2913941528

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10127

RlaP

RNA repair pathway DNA polymerase beta family

3

242

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
5c1t-assembly2.cif.gz_B crystal structure of the gtp-bound wild type ehrabx3 from entamoeba histolytica 0.623 37 86
6dzh-assembly1.cif.gz_A hras g13d bound to gdp (h13gdp) 0.6124 51 78
1ryh-assembly1.cif.gz_A alternative splicing of rac1 generates rac1b, a self-activating gtpase 0.5997 53 78
1ryf-assembly1.cif.gz_A alternative splicing of rac1 generates rac1b, a self-activating gtpase 0.5983 53 78
1ryh-assembly2.cif.gz_B alternative splicing of rac1 generates rac1b, a self-activating gtpase 0.5942 53 80
ID Description Score Start End Superfamily
3c18C01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.6707 6 120 3.30.460.10
4ebkB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.6537 6 87 3.30.460.10
3c18C01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.637 6 120 3.30.460.10
1knyB01 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.6172 6 111 3.30.460.10
af_Q58021_1_93_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.6149 7 86 3.30.460.10
ID Description Score Start End GO Terms
AF-A0A7W0RNH7-F1-model_v4 Polynucleotide kinase-phosphatase 0.9755 1 235 GO:0016301
GO:0016787
AF-A0A518L585-F1-model_v4 deleted 0.9746 1 250
AF-A0A2W0AQ14-F1-model_v4 Cysteine-rich CPCC domain-containing protein 0.974 6 251
AF-A0A7Y5PVK9-F1-model_v4 Nucleotidyltransferase domain-containing protein 0.9703 41 249 GO:0016740
AF-A0A831X2R7-F1-model_v4 Nucleotidyltransferase 0.9691 106 249

Map