F183405

General Info

Members Datasets Scaffolds Average Seq Length
141 110 282 187

Family's Representative Sequence

Representative Sequence 3300042006|Ga0439432_007109|Ga0439432_007109_2083_2721
Length 212
Sequence MLTAREASIGLHERRNLRRFHTSAATILVMDEPRTLWTIGHSTREWETFVAMLREADIEALADVRRYPGSRRHPQFAADAMARSLPAAGIEFVPIPDLGGRRSPRKDSPNTAWRNLHFRGYADYMDTSEYRAASDRLASLARRKRVAAMCAEAMWWQCHRSLIADDFKAQGWTVIHLMQPGRAQEHPYTGAARIVGGKLDYSAEDPPQRPLL

Samples

Sample ID Description Type Environment
1 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300012482 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510 Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
54 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
55 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
68 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
69 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
70 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
71 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
72 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
73 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
74 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
75 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
78 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
79 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
80 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
81 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
82 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
89 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
90 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
91 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
92 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
93 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
94 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
101 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
102 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
103 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
107 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
108 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 2643221695 Lysobacter sp. Root494 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.29
Metatranscriptomes 0
Isolates 0.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.26
Nodule 0
Rhizoplane 12.77
Rhizosphere 72.34
Stem 0
Stem Tuber 0
Unclassified 11.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439432_007109 3300042006 Bacteria 3977
2 rootH1_10013760 3300003316 Bacteria 11058
3 Ga0055535_1000981 3300003761 Bacteria 18548
4 Ga0065707_10330584 3300005295 Bacteria 950
5 Ga0070689_101060255 3300005340 Unclassified 723
6 Ga0070687_100549606 3300005343 Unclassified 785
7 Ga0070687_100911627 3300005343 Unclassified 631
8 Ga0070661_100941755 3300005344 Unclassified 714
9 Ga0070669_100020472 3300005353 Bacteria 4725
10 Ga0070671_100067614 3300005355 Bacteria 2979
11 Ga0070667_100000010 3300005367 Bacteria 273500
12 Ga0070701_10408113 3300005438 Bacteria 862
13 Ga0070663_100000413 3300005455 Bacteria 22436
14 Ga0070662_100982079 3300005457 Unclassified 722
15 Ga0070698_100277088 3300005471 Unclassified 1609
16 Ga0070679_100461272 3300005530 Bacteria 1215
17 Ga0070684_100164608 3300005535 Unclassified 2013
18 Ga0068853_100048920 3300005539 Bacteria 3632
19 Ga0070704_100153920 3300005549 Bacteria 1811
20 Ga0068855_100044124 3300005563 Bacteria 5278
21 Ga0068857_100110705 3300005577 Unclassified 2468
22 Ga0068856_100023182 3300005614 Bacteria 6038
23 Ga0068864_100961756 3300005618 Bacteria 845
24 Ga0068860_100418322 3300005843 Bacteria 1328
25 Ga0105240_10052952 3300009093 Bacteria 5099
26 Ga0105240_10066462 3300009093 Bacteria 4472
27 Ga0114129_10684723 3300009147 Bacteria 1319
28 Ga0105248_10000240 3300009177 Bacteria 63265
29 Ga0105248_11518542 3300009177 Bacteria 758
30 Ga0105237_10000652 3300009545 Bacteria 48467
31 Ga0105238_10087758 3300009551 Bacteria 3097
32 Ga0105249_10000226 3300009553 Bacteria 64018
33 Ga0105249_10496801 3300009553 Bacteria 1265
34 Ga0105239_10093446 3300010375 Bacteria 3321
35 Ga0105239_10704692 3300010375 Bacteria 1154
36 Ga0157318_1000348 3300012482 Bacteria 1888
37 Ga0163162_10575089 3300013306 Bacteria 1254
38 Ga0157372_10478441 3300013307 Bacteria 1452
39 Ga0157380_10212373 3300014326 Bacteria 1725
40 Ga0163161_10531118 3300017792 Unclassified 962
41 Ga0209672_100441 3300025228 Bacteria 23665
42 Ga0209258_100412 3300025242 Bacteria 51830
43 Ga0209148_1000390 3300025254 Bacteria 51830
44 Ga0207695_10097074 3300025913 Bacteria 2948
45 Ga0207695_10679423 3300025913 Bacteria 910
46 Ga0207660_10275673 3300025917 Bacteria 1333
47 Ga0207652_10070198 3300025921 Bacteria 3042
48 Ga0207652_10151711 3300025921 Bacteria 2075
49 Ga0207646_10322540 3300025922 Unclassified 1396
50 Ga0207681_10029859 3300025923 Bacteria 3548
51 Ga0207694_10040256 3300025924 Unclassified 3597
52 Ga0207665_10022828 3300025939 Unclassified 4118
53 Ga0207711_10000860 3300025941 Bacteria 29387
54 Ga0207667_10328507 3300025949 Bacteria 1562
55 Ga0207712_10000141 3300025961 Bacteria 75812
56 Ga0207658_10000261 3300025986 Bacteria 55240
57 Ga0207678_10000223 3300026067 Bacteria 50785
58 Ga0207702_10504870 3300026078 Unclassified 1179
59 Ga0207676_10108597 3300026095 Bacteria 2317
60 Ga0307515_10289105 3300028794 Bacteria 1337
61 Ga0316182_1044079 3300030745 Bacteria 3029
62 Ga0265332_10028145 3300031238 Bacteria 2461
63 Ga0307513_10024140 3300031456 Bacteria 7080
64 Ga0307408_100417293 3300031548 Bacteria 1156
65 Ga0307405_10954699 3300031731 Unclassified 729
66 Ga0307413_10405498 3300031824 Bacteria 1069
67 Ga0307413_10571615 3300031824 Bacteria 920
68 Ga0307410_10064985 3300031852 Bacteria 2509
69 Ga0307410_10215607 3300031852 Bacteria 1473
70 Ga0307406_10636806 3300031901 Bacteria 883
71 Ga0307407_10571800 3300031903 Bacteria 838
72 Ga0307409_100095594 3300031995 Bacteria 2449
73 Ga0307409_100506311 3300031995 Bacteria 1177
74 Ga0307414_10001107 3300032004 Bacteria 13779
75 Ga0307414_10037559 3300032004 Bacteria 3244
76 Ga0307414_10085481 3300032004 Bacteria 2324
77 Ga0307414_10282535 3300032004 Bacteria 1395
78 Ga0307414_10300809 3300032004 Bacteria 1357
79 Ga0307414_10603736 3300032004 Bacteria 984
80 Ga0307411_10176374 3300032005 Bacteria 1617
81 Ga0307411_10263247 3300032005 Bacteria 1363
82 Ga0307411_10339536 3300032005 Bacteria 1220
83 Ga0307411_10396168 3300032005 Bacteria 1140
84 Ga0395899_0039600 3300037312 Bacteria 3527
85 Ga0439465_0000369 3300041413 Bacteria 12906
86 Ga0451791_0020770 3300041451 Bacteria 2712
87 Ga0451791_0365652 3300041451 Bacteria 1200
88 Ga0451791_1151570 3300041451 Bacteria 869
89 Ga0451793_1166522 3300041452 Bacteria 977
90 Ga0451797_0203951 3300041453 Bacteria 692
91 Ga0451797_1360472 3300041453 Bacteria 1707
92 Ga0451802_2064363 3300041460 Bacteria 1698
93 Ga0451807_2231105 3300041486 Bacteria 655
94 Ga0451843_0458293 3300041509 Bacteria 3393
95 Ga0451843_1437943 3300041509 Bacteria 926
96 Ga0439432_037505 3300042006 Bacteria 1546
97 Ga0439432_068344 3300042006 Bacteria 1086
98 Ga0439449_0013083 3300042007 Bacteria 3121
99 Ga0439449_0047281 3300042007 Bacteria 1594
100 Ga0495654_0073502 3300046530 Bacteria 1617
101 Ga0495667_0125245 3300046559 Bacteria 1658
102 Ga0495656_0004488 3300046615 Bacteria 4782
103 Ga0495669_0039860 3300046684 Bacteria 2081
104 Ga0495671_0025195 3300046692 Bacteria 3093
105 Ga0495636_0168647 3300047318 Bacteria 989
106 Ga0495686_0003526 3300047472 Bacteria 13487
107 Ga0496101_0241492 3300048904 Bacteria 1406
108 Ga0496102_0283038 3300048905 Bacteria 1563
109 Ga0496108_0057760 3300048911 Bacteria 3260
110 Ga0496109_0028628 3300048912 Bacteria 4984
111 Ga0496110_0172341 3300048913 Bacteria 1963
112 Ga0496110_0289907 3300048913 Bacteria 1490
113 Ga0496111_0161520 3300048914 Bacteria 1663
114 Ga0496111_0243747 3300048914 Bacteria 1334
115 Ga0496113_0481700 3300048916 Bacteria 997
116 Ga0496113_0889376 3300048916 Bacteria 705
117 Ga0496117_0064912 3300048920 Bacteria 2485
118 Ga0496118_0000226 3300048921 Bacteria 98582
119 Ga0496121_0051757 3300048924 Bacteria 3456
120 Ga0496121_0069199 3300048924 Bacteria 2850
121 Ga0496122_0001421 3300048925 Bacteria 38773
122 Ga0496123_0000029 3300048926 Bacteria 295871
123 Ga0496124_0506627 3300048927 Bacteria 808
124 Ga0496126_0147990 3300048929 Bacteria 2015
125 Ga0496126_0183116 3300048929 Bacteria 1778
126 Ga0501032_0239332 3300049569 Bacteria 1179
127 Ga0501034_0049178 3300049571 Bacteria 4255
128 Ga0501043_0272765 3300049579 Bacteria 1298
129 Ga0501047_0012939 3300049581 Bacteria 7902
130 Ga0501070_0705939 3300049586 Bacteria 797
131 Ga0501202_009377 3300049652 Bacteria 1799
132 Ga0501250_016332 3300049680 Bacteria 921
133 Ga0501270_003397 3300049767 Bacteria 1715
134 Ga0501044_0039024 3300049823 Bacteria 4956
135 Ga0501044_0979659 3300049823 Unclassified 718
136 nmdc:mga05p37_1152494_c1 3300050507 Unclassified 806
137 nmdc:mga0n895_805693_c1 3300050512 Bacteria 929
138 Ga0500643_002333 3300053087 Bacteria 9928
139 Ga0500597_000444 3300053120 Bacteria 8729
140 Ga0501082_0243986 3300060353 Bacteria 1563
141 2644529846 2643221695 Bacteria 3441323
142 Ga0439432_007109
143 rootH1_10013760
144 Ga0055535_1000981
145 Ga0065707_10330584
146 Ga0070689_101060255
147 Ga0070687_100549606
148 Ga0070687_100911627
149 Ga0070661_100941755
150 Ga0070669_100020472
151 Ga0070671_100067614
152 Ga0070667_100000010
153 Ga0070701_10408113
154 Ga0070663_100000413
155 Ga0070662_100982079
156 Ga0070698_100277088
157 Ga0070679_100461272
158 Ga0070684_100164608
159 Ga0068853_100048920
160 Ga0070704_100153920
161 Ga0068855_100044124
162 Ga0068857_100110705
163 Ga0068856_100023182
164 Ga0068864_100961756
165 Ga0068860_100418322
166 Ga0105240_10052952
167 Ga0105240_10066462
168 Ga0114129_10684723
169 Ga0105248_10000240
170 Ga0105248_11518542
171 Ga0105237_10000652
172 Ga0105238_10087758
173 Ga0105249_10000226
174 Ga0105249_10496801
175 Ga0105239_10093446
176 Ga0105239_10704692
177 Ga0157318_1000348
178 Ga0163162_10575089
179 Ga0157372_10478441
180 Ga0157380_10212373
181 Ga0163161_10531118
182 Ga0209672_100441
183 Ga0209258_100412
184 Ga0209148_1000390
185 Ga0207695_10097074
186 Ga0207695_10679423
187 Ga0207660_10275673
188 Ga0207652_10070198
189 Ga0207652_10151711
190 Ga0207646_10322540
191 Ga0207681_10029859
192 Ga0207694_10040256
193 Ga0207665_10022828
194 Ga0207711_10000860
195 Ga0207667_10328507
196 Ga0207712_10000141
197 Ga0207658_10000261
198 Ga0207678_10000223
199 Ga0207702_10504870
200 Ga0207676_10108597
201 Ga0307515_10289105
202 Ga0316182_1044079
203 Ga0265332_10028145
204 Ga0307513_10024140
205 Ga0307408_100417293
206 Ga0307405_10954699
207 Ga0307413_10405498
208 Ga0307413_10571615
209 Ga0307410_10064985
210 Ga0307410_10215607
211 Ga0307406_10636806
212 Ga0307407_10571800
213 Ga0307409_100095594
214 Ga0307409_100506311
215 Ga0307414_10001107
216 Ga0307414_10037559
217 Ga0307414_10085481
218 Ga0307414_10282535
219 Ga0307414_10300809
220 Ga0307414_10603736
221 Ga0307411_10176374
222 Ga0307411_10263247
223 Ga0307411_10339536
224 Ga0307411_10396168
225 Ga0395899_0039600
226 Ga0439465_0000369
227 Ga0451791_0020770
228 Ga0451791_0365652
229 Ga0451791_1151570
230 Ga0451793_1166522
231 Ga0451797_0203951
232 Ga0451797_1360472
233 Ga0451802_2064363
234 Ga0451807_2231105
235 Ga0451843_0458293
236 Ga0451843_1437943
237 Ga0439432_037505
238 Ga0439432_068344
239 Ga0439449_0013083
240 Ga0439449_0047281
241 Ga0495654_0073502
242 Ga0495667_0125245
243 Ga0495656_0004488
244 Ga0495669_0039860
245 Ga0495671_0025195
246 Ga0495636_0168647
247 Ga0495686_0003526
248 Ga0496101_0241492
249 Ga0496102_0283038
250 Ga0496108_0057760
251 Ga0496109_0028628
252 Ga0496110_0172341
253 Ga0496110_0289907
254 Ga0496111_0161520
255 Ga0496111_0243747
256 Ga0496113_0481700
257 Ga0496113_0889376
258 Ga0496117_0064912
259 Ga0496118_0000226
260 Ga0496121_0051757
261 Ga0496121_0069199
262 Ga0496122_0001421
263 Ga0496123_0000029
264 Ga0496124_0506627
265 Ga0496126_0147990
266 Ga0496126_0183116
267 Ga0501032_0239332
268 Ga0501034_0049178
269 Ga0501043_0272765
270 Ga0501047_0012939
271 Ga0501070_0705939
272 Ga0501202_009377
273 Ga0501250_016332
274 Ga0501270_003397
275 Ga0501044_0039024
276 Ga0501044_0979659
277 nmdc:mga05p37_1152494_c1
278 nmdc:mga0n895_805693_c1
279 Ga0500643_002333
280 Ga0500597_000444
281 Ga0501082_0243986
282 2644529846

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04343

DUF488

Domain of unknown function DUF488

45

167

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7cum-assembly1.cif.gz_A cryo-em structure of human gaba(b) receptor bound to the antagonist cgp54626 0.7297 15 63
2i6i-assembly1.cif.gz_A crystal structures of the archaeal sulfolobus ptp-fold phosphatase 0.6661 2 143
3ndc-assembly1.cif.gz_A crystal structure of precorrin-4 c11-methyltransferase from rhodobacter capsulatus 0.6574 1 148
2i6o-assembly1.cif.gz_A crystal structure of the complex of the archaeal sulfolobus ptp-fold phosphatase with phosphopeptides n-g-(p)y-k-n 0.6573 2 143
8t6j-assembly1.cif.gz_A cdppb-bound inactive mglu5 0.6438 15 144
ID Description Score Start End Superfamily
af_Q2G0A6_1_127_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8037 14 63 3.40.50.620
4r0sA00 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.695 11 139 3.90.190.10
af_Q7EYM9_283_443_3.90.190.10 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.6747 11 140 3.90.190.10
af_Q54DU9_9_165_3.90.190.10 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily 0.6565 6 143 3.90.190.10
2po3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.6512 15 63 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A0L8EV09-F1-model_v4 deleted 0.9991 1 175
AF-A0A158DNL2-F1-model_v4 PF04343 family protein 0.9953 1 178
AF-A0A366FI97-F1-model_v4 Uncharacterized protein DUF488 0.9949 2 177
AF-A0A1I3I144-F1-model_v4 DUF488 domain-containing protein 0.9947 5 176
AF-A0A317L4Z6-F1-model_v4 deleted 0.9943 1 175

Map