F183070

General Info

Members Datasets Scaffolds Average Seq Length
141 61 282 446

Family's Representative Sequence

Representative Sequence 3300031240|Ga0265320_10000120|Ga0265320_1000012033
Length 523
Sequence MSVEILARLQFAFTISFHYFYPPMSIGLTVMLVLMEAAWLYTKNPRYHNMARFWTRIFGLSFALGVATGIVMEFEFGTNWATYARFVGDVFGSPLAAEGIFAFFLESGFLAILLFGWDKVGPKLHFFATCMVSLGSHFSAIWIVVANSWMQTPAAFHLVRQLVEPNGAVTEVPLPADYLYAPGDRVRAVIDSFWGMVFNPSTLQRLSHVILAAWLTGAFVVISISAYYILRHRHLDFARSSLKISLAFAAVVSLLQLVSADATARGVANHQPVKLAGMEGLTQSGPNAPLALFGYVAWQRDAGGHIIGVEDHVVRFPDLLSVLVSGDFLHPETAAAVPVAGLNNLPTDEFLLKRHPGSTPEQLKVIRPQYWPNVPVIFQTYHLMIAIGTGLIGITLAGVFLWVRGWLWDLDRWYSTWFLRLLVVSVILPQLANQAGWFTAEMGRQPWTVYNILRTSQSYSQAVRADEIVFSLIGFALVYLLLFIMFIYLLNSKIQHGPSDTEQSSQLPEKWRYLETKAAMART

Samples

Sample ID Description Type Environment
1 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
4 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
5 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
6 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
7 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
8 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
9 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
10 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
11 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
12 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
20 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
21 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
22 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
23 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
24 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
25 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
26 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
27 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
28 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
29 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
30 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
31 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
32 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
33 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
34 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
35 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
36 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
37 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
38 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
39 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
40 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
41 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
44 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
45 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
46 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
47 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
55 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
58 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
59 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
60 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
61 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.58
Metatranscriptomes 0.71
Isolates 0.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.71
Nodule 0
Rhizoplane 0
Rhizosphere 97.87
Stem 0
Stem Tuber 0
Unclassified 2.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265320_10000120 3300031240 Bacteria 68719
2 Ga0070676_10053421 3300005328 Bacteria 2380
3 Ga0068853_100069187 3300005539 Bacteria 3070
4 Ga0070665_100000029 3300005548 Bacteria 342699
5 Ga0070665_100000607 3300005548 Bacteria 49361
6 Ga0068863_100036266 3300005841 Bacteria 4698
7 Ga0081455_10016185 3300005937 Bacteria 7209
8 Ga0105240_10000265 3300009093 Bacteria 103590
9 Ga0105237_10000020 3300009545 Bacteria 231046
10 Ga0105237_10077943 3300009545 Bacteria 3303
11 Ga0105238_10012221 3300009551 Bacteria 8657
12 Ga0105239_10004727 3300010375 Bacteria 16166
13 Ga0157374_10000535 3300013296 Bacteria 34021
14 Ga0207645_10017625 3300025907 Bacteria 4709
15 Ga0207695_10000357 3300025913 Bacteria 104792
16 Ga0207671_10000010 3300025914 Bacteria 568302
17 Ga0207712_10174955 3300025961 Bacteria 1681
18 Ga0207641_10087482 3300026088 Bacteria 2719
19 Ga0207648_10069479 3300026089 Bacteria 3069
20 Ga0268266_10000371 3300028379 Bacteria 69245
21 Ga0268266_10290580 3300028379 Bacteria 1522
22 Ga0265337_1022282 3300028556 Bacteria 1964
23 Ga0265326_10001662 3300028558 Bacteria 7705
24 Ga0265326_10012752 3300028558 Bacteria 2464
25 Ga0265319_1000992 3300028563 Bacteria 17789
26 Ga0265319_1001603 3300028563 Bacteria 13194
27 Ga0265318_10009769 3300028577 Bacteria 4205
28 Ga0265318_10011090 3300028577 Unclassified 3896
29 Ga0265323_10000377 3300028653 Bacteria 25812
30 Ga0265323_10000596 3300028653 Bacteria 19876
31 Ga0265323_10001303 3300028653 Bacteria 12444
32 Ga0265323_10001743 3300028653 Bacteria 10318
33 Ga0265323_10002370 3300028653 Bacteria 8683
34 Ga0265323_10003359 3300028653 Bacteria 7092
35 Ga0265323_10005278 3300028653 Bacteria 5491
36 Ga0265323_10005875 3300028653 Bacteria 5189
37 Ga0265323_10025133 3300028653 Bacteria 2258
38 Ga0265322_10000633 3300028654 Bacteria 13281
39 Ga0265322_10001515 3300028654 Bacteria 7525
40 Ga0265322_10001841 3300028654 Bacteria 6726
41 Ga0265322_10004923 3300028654 Bacteria 3960
42 Ga0265336_10000774 3300028666 Bacteria 16931
43 Ga0265338_10000128 3300028800 Bacteria 138764
44 Ga0265338_10000273 3300028800 Bacteria 94209
45 Ga0265338_10015193 3300028800 Bacteria 8485
46 Ga0265338_10027748 3300028800 Bacteria 5671
47 Ga0265338_10116399 3300028800 Bacteria 2141
48 Ga0265338_10124045 3300028800 Bacteria 2053
49 Ga0265324_10000265 3300029957 Bacteria 38646
50 Ga0265324_10011624 3300029957 Bacteria 3352
51 Ga0265324_10043735 3300029957 Bacteria 1545
52 Ga0265330_10001664 3300031235 Bacteria 12612
53 Ga0265330_10002374 3300031235 Bacteria 10322
54 Ga0265330_10003485 3300031235 Bacteria 8203
55 Ga0265330_10016264 3300031235 Bacteria 3434
56 Ga0265330_10053523 3300031235 Bacteria 1766
57 Ga0265332_10000693 3300031238 Bacteria 21552
58 Ga0265332_10014666 3300031238 Bacteria 3464
59 Ga0265328_10015785 3300031239 Bacteria 2953
60 Ga0265328_10044985 3300031239 Bacteria 1624
61 Ga0265320_10009258 3300031240 Bacteria 5953
62 Ga0265320_10011998 3300031240 Bacteria 5068
63 Ga0265320_10022639 3300031240 Unclassified 3358
64 Ga0265325_10037104 3300031241 Bacteria 2577
65 Ga0265329_10000073 3300031242 Bacteria 44995
66 Ga0265329_10008142 3300031242 Bacteria 3997
67 Ga0265340_10035438 3300031247 Bacteria 2478
68 Ga0265339_10013322 3300031249 Bacteria 4987
69 Ga0265339_10040974 3300031249 Unclassified 2573
70 Ga0265339_10067876 3300031249 Bacteria 1907
71 Ga0265331_10010670 3300031250 Bacteria 5066
72 Ga0265327_10036043 3300031251 Bacteria 2725
73 Ga0265316_10000068 3300031344 Bacteria 108687
74 Ga0265316_10000247 3300031344 Bacteria 62442
75 Ga0265316_10000720 3300031344 Bacteria 36476
76 Ga0265316_10011739 3300031344 Bacteria 7881
77 Ga0265316_10012163 3300031344 Bacteria 7726
78 Ga0265316_10018079 3300031344 Bacteria 6071
79 Ga0265316_10023281 3300031344 Bacteria 5206
80 Ga0265316_10046384 3300031344 Bacteria 3443
81 Ga0265316_10054514 3300031344 Bacteria 3130
82 Ga0265316_10071101 3300031344 Bacteria 2683
83 Ga0265316_10099522 3300031344 Bacteria 2211
84 Ga0265316_10105159 3300031344 Bacteria 2142
85 Ga0316575_10008151 3300031665 Bacteria 3810
86 Ga0316579_10019466 3300031691 Bacteria 3000
87 Ga0265314_10000285 3300031711 Bacteria 73539
88 Ga0265314_10020010 3300031711 Bacteria 5174
89 Ga0265314_10039947 3300031711 Bacteria 3374
90 Ga0265342_10000992 3300031712 Bacteria 27981
91 Ga0265342_10004451 3300031712 Bacteria 11037
92 Ga0265342_10006959 3300031712 Bacteria 8357
93 Ga0265342_10020678 3300031712 Bacteria 4215
94 Ga0265342_10022062 3300031712 Bacteria 4054
95 Ga0265342_10062702 3300031712 Bacteria 2187
96 Ga0316576_10004397 3300031727 Bacteria 8440
97 Ga0316576_10025401 3300031727 Bacteria 4147
98 Ga0316578_10008785 3300031728 Bacteria 5162
99 Ga0316578_10049284 3300031728 Bacteria 2461
100 Ga0316577_10000021 3300031733 Bacteria 35038
101 Ga0316583_10010761 3300032133 Bacteria 3297
102 Ga0316585_10022199 3300032137 Bacteria 1952
103 Ga0316593_10000927 3300032168 Bacteria 6021
104 Ga0316584_0013024 3300036712 Bacteria 5876
105 Ga0395899_0061827 3300037312 Bacteria 2758
106 Ga0451577_0001897 3300042876 Bacteria 26518
107 Ga0451577_0012024 3300042876 Bacteria 8147
108 Ga0451577_0076112 3300042876 Bacteria 2992
109 Ga0451577_0077626 3300042876 Bacteria 2961
110 Ga0451577_0142166 3300042876 Bacteria 2157
111 Ga0453683_0019209 3300044673 Bacteria 4377
112 Ga0453683_0044025 3300044673 Bacteria 2800
113 Ga0453684_0000185 3300044712 Bacteria 274418
114 Ga0453684_0007145 3300044712 Bacteria 20778
115 Ga0453684_0007970 3300044712 Bacteria 19202
116 Ga0453684_0008863 3300044712 Bacteria 17824
117 Ga0453684_0011044 3300044712 Bacteria 15258
118 Ga0453684_0022113 3300044712 Bacteria 9457
119 Ga0453684_0025458 3300044712 Bacteria 8591
120 Ga0453684_0036247 3300044712 Bacteria 6799
121 Ga0453684_0060157 3300044712 Bacteria 4890
122 Ga0453684_0063010 3300044712 Bacteria 4746
123 Ga0453684_0077391 3300044712 Bacteria 4170
124 Ga0453684_0094144 3300044712 Bacteria 3686
125 Ga0453684_0124097 3300044712 Bacteria 3111
126 Ga0453684_0229607 3300044712 Bacteria 2143
127 Ga0451576_0001113 3300045051 Bacteria 48991
128 Ga0451576_0001463 3300045051 Bacteria 40109
129 Ga0451576_0004221 3300045051 Bacteria 18881
130 Ga0451576_0008118 3300045051 Bacteria 12366
131 Ga0451576_0045425 3300045051 Bacteria 4626
132 Ga0451576_0144419 3300045051 Bacteria 2481
133 Ga0496116_0051695 3300048919 Bacteria 2728
134 Ga0501046_0043950 3300049580 Bacteria 3555
135 Ga0501047_0004100 3300049581 Bacteria 13708
136 Ga0501083_0001696 3300049744 Bacteria 15013
137 Ga0501083_0013160 3300049744 Bacteria 5782
138 Ga0501035_0011495 3300049822 Bacteria 8203
139 Ga0495619_0002663 3300053085 Bacteria 11676
140 Ga0500595_000009 3300053119 Bacteria 278382
141 2788433512 2786546940 Bacteria 6396474
142 Ga0265320_10000120
143 Ga0070676_10053421
144 Ga0068853_100069187
145 Ga0070665_100000029
146 Ga0070665_100000607
147 Ga0068863_100036266
148 Ga0081455_10016185
149 Ga0105240_10000265
150 Ga0105237_10000020
151 Ga0105237_10077943
152 Ga0105238_10012221
153 Ga0105239_10004727
154 Ga0157374_10000535
155 Ga0207645_10017625
156 Ga0207695_10000357
157 Ga0207671_10000010
158 Ga0207712_10174955
159 Ga0207641_10087482
160 Ga0207648_10069479
161 Ga0268266_10000371
162 Ga0268266_10290580
163 Ga0265337_1022282
164 Ga0265326_10001662
165 Ga0265326_10012752
166 Ga0265319_1000992
167 Ga0265319_1001603
168 Ga0265318_10009769
169 Ga0265318_10011090
170 Ga0265323_10000377
171 Ga0265323_10000596
172 Ga0265323_10001303
173 Ga0265323_10001743
174 Ga0265323_10002370
175 Ga0265323_10003359
176 Ga0265323_10005278
177 Ga0265323_10005875
178 Ga0265323_10025133
179 Ga0265322_10000633
180 Ga0265322_10001515
181 Ga0265322_10001841
182 Ga0265322_10004923
183 Ga0265336_10000774
184 Ga0265338_10000128
185 Ga0265338_10000273
186 Ga0265338_10015193
187 Ga0265338_10027748
188 Ga0265338_10116399
189 Ga0265338_10124045
190 Ga0265324_10000265
191 Ga0265324_10011624
192 Ga0265324_10043735
193 Ga0265330_10001664
194 Ga0265330_10002374
195 Ga0265330_10003485
196 Ga0265330_10016264
197 Ga0265330_10053523
198 Ga0265332_10000693
199 Ga0265332_10014666
200 Ga0265328_10015785
201 Ga0265328_10044985
202 Ga0265320_10009258
203 Ga0265320_10011998
204 Ga0265320_10022639
205 Ga0265325_10037104
206 Ga0265329_10000073
207 Ga0265329_10008142
208 Ga0265340_10035438
209 Ga0265339_10013322
210 Ga0265339_10040974
211 Ga0265339_10067876
212 Ga0265331_10010670
213 Ga0265327_10036043
214 Ga0265316_10000068
215 Ga0265316_10000247
216 Ga0265316_10000720
217 Ga0265316_10011739
218 Ga0265316_10012163
219 Ga0265316_10018079
220 Ga0265316_10023281
221 Ga0265316_10046384
222 Ga0265316_10054514
223 Ga0265316_10071101
224 Ga0265316_10099522
225 Ga0265316_10105159
226 Ga0316575_10008151
227 Ga0316579_10019466
228 Ga0265314_10000285
229 Ga0265314_10020010
230 Ga0265314_10039947
231 Ga0265342_10000992
232 Ga0265342_10004451
233 Ga0265342_10006959
234 Ga0265342_10020678
235 Ga0265342_10022062
236 Ga0265342_10062702
237 Ga0316576_10004397
238 Ga0316576_10025401
239 Ga0316578_10008785
240 Ga0316578_10049284
241 Ga0316577_10000021
242 Ga0316583_10010761
243 Ga0316585_10022199
244 Ga0316593_10000927
245 Ga0316584_0013024
246 Ga0395899_0061827
247 Ga0451577_0001897
248 Ga0451577_0012024
249 Ga0451577_0076112
250 Ga0451577_0077626
251 Ga0451577_0142166
252 Ga0453683_0019209
253 Ga0453683_0044025
254 Ga0453684_0000185
255 Ga0453684_0007145
256 Ga0453684_0007970
257 Ga0453684_0008863
258 Ga0453684_0011044
259 Ga0453684_0022113
260 Ga0453684_0025458
261 Ga0453684_0036247
262 Ga0453684_0060157
263 Ga0453684_0063010
264 Ga0453684_0077391
265 Ga0453684_0094144
266 Ga0453684_0124097
267 Ga0453684_0229607
268 Ga0451576_0001113
269 Ga0451576_0001463
270 Ga0451576_0004221
271 Ga0451576_0008118
272 Ga0451576_0045425
273 Ga0451576_0144419
274 Ga0496116_0051695
275 Ga0501046_0043950
276 Ga0501047_0004100
277 Ga0501083_0001696
278 Ga0501083_0013160
279 Ga0501035_0011495
280 Ga0495619_0002663
281 Ga0500595_000009
282 2788433512

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01654

Cyt_bd_oxida_I

Cytochrome bd terminal oxidase subunit I

6

498

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ose-assembly1.cif.gz_D cytochrome bd-ii type oxidase with bound aurachin d 0.9421 5 437
5ir6-assembly1.cif.gz_A the structure of bd oxidase from geobacillus thermodenitrificans 0.9403 5 437
5ir6-assembly1.cif.gz_A the structure of bd oxidase from geobacillus thermodenitrificans 0.9277 5 437
7nkz-assembly1.cif.gz_A cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution 0.9247 5 437
7nkz-assembly1.cif.gz_A cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution 0.8799 5 437
ID Description Score Start End Superfamily
af_Q9Z2C6_1_116_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.6728 321 379 1.20.140.150
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.6274 13 374 1.20.1630.10
af_I1MTQ0_31_190_1.20.120.520 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);nmb1532 protein domain like 0.6204 12 145 1.20.120.520
af_P76173_1_274_1.20.1630.10 Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain 0.6075 13 374 1.20.1630.10
af_Q4DM91_26_149_1.20.120.350 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Voltage-gated potassium channels. Chain C 0.6054 17 150 1.20.120.350
ID Description Score Start End GO Terms
AF-A0A2H6HSP5-F1-model_v4 Putative cytochrome bd menaquinol oxidase subunit I (EC 1.10.3.-) 0.9837 103 443 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A2G6J9S8-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9816 5 329 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A1V5KGU5-F1-model_v4 Cytochrome bd ubiquinol oxidase subunit 1 (EC 1.10.3.-) 0.9801 2 442 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A7C3SSH7-F1-model_v4 Cytochrome ubiquinol oxidase subunit I 0.9792 8 439 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069
AF-A0A1G0R8P6-F1-model_v4 Cytochrome D ubiquinol oxidase subunit I 0.9788 134 439 GO:0005886
GO:0009055
GO:0016682
GO:0019646
GO:0020037
GO:0046872
GO:0070069

Map