F182115

General Info

Members Datasets Scaffolds Average Seq Length
141 114 282 233

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100067947|Ga0068860_1000679475
Length 245
Sequence MSDREHDRIPFSMQVEFRTASSFLVAYSVNLSRGGMFIETDAEVPMGVRLALDLHVPGAGLLNMVGLVAWRRGADSPDGPAGLGVEFQDVAPQLGSTIDKLVSSFHGVQILLLSGDSRDRTTLMRSIKSIISTADVLQAADAALAATLLTSEIDLAVVDLDFDPEGALATLIAARQLSPRVPTIAITANPKLRELARGVGADEVAANPPPFSELQVALVRALSKPVSVQRIMMADASLAAAAPRS

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
63 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
66 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
67 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
68 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
69 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
70 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
71 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
72 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
73 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
86 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
90 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
91 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
98 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
99 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
100 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
101 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
102 3300053112 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 endosphere Metagenome Endosphere
103 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
104 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
105 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
106 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
107 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
108 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
109 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
110 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
111 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
112 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
113 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
114 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.89
Nodule 0
Rhizoplane 0
Rhizosphere 75.89
Stem 0
Stem Tuber 0
Unclassified 9.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100067947 3300005843 Bacteria 3386
2 rootH2_10187312 3300003320 Bacteria 1979
3 Ga0070658_10204555 3300005327 Bacteria 1667
4 Ga0070690_100006492 3300005330 Bacteria 6629
5 Ga0068869_100164387 3300005334 Bacteria 1730
6 Ga0068869_100360519 3300005334 Bacteria 1187
7 Ga0070680_100069515 3300005336 Bacteria 2892
8 Ga0070680_100099346 3300005336 Bacteria 2415
9 Ga0070680_100106824 3300005336 Bacteria 2328
10 Ga0070689_100023291 3300005340 Bacteria 4634
11 Ga0070687_100187060 3300005343 Bacteria 1245
12 Ga0070713_100782823 3300005436 Bacteria 914
13 Ga0070708_100232473 3300005445 Bacteria 1730
14 Ga0070678_100250832 3300005456 Bacteria 1484
15 Ga0070681_10046235 3300005458 Bacteria 4352
16 Ga0070681_10090727 3300005458 Bacteria 3006
17 Ga0070706_100019573 3300005467 Bacteria 6244
18 Ga0070698_100008912 3300005471 Bacteria 10787
19 Ga0070679_100003842 3300005530 Bacteria 13796
20 Ga0070679_100078298 3300005530 Bacteria 3295
21 Ga0070679_100380493 3300005530 Bacteria 1358
22 Ga0070686_100252468 3300005544 Bacteria 1289
23 Ga0068856_100271590 3300005614 Bacteria 1711
24 Ga0068864_100193337 3300005618 Bacteria 1866
25 Ga0068851_10213344 3300005834 Unclassified 1082
26 Ga0068863_100176955 3300005841 Bacteria 2048
27 Ga0068860_100369166 3300005843 Bacteria 1415
28 Ga0068862_100885130 3300005844 Bacteria 877
29 Ga0070717_10042069 3300006028 Bacteria 3727
30 Ga0075430_100110953 3300006846 Bacteria 2287
31 Ga0075431_100181462 3300006847 Bacteria 2160
32 Ga0075431_100634592 3300006847 Bacteria 1050
33 Ga0075429_100014300 3300006880 Bacteria 6882
34 Ga0075429_100066451 3300006880 Bacteria 3139
35 Ga0068865_100106216 3300006881 Unclassified 2064
36 Ga0097620_100630191 3300006931 Bacteria 1165
37 Ga0075435_100078554 3300007076 Bacteria 2707
38 Ga0105245_10059455 3300009098 Bacteria 3442
39 Ga0105245_10417171 3300009098 Bacteria 1345
40 Ga0105243_10186811 3300009148 Bacteria 1807
41 Ga0105248_10789427 3300009177 Bacteria 1072
42 Ga0105237_10077075 3300009545 Bacteria 3324
43 Ga0105238_10207323 3300009551 Bacteria 1936
44 Ga0105238_10671089 3300009551 Unclassified 1047
45 Ga0105249_10173309 3300009553 Bacteria 2094
46 Ga0157378_10139636 3300013297 Bacteria 2249
47 Ga0163163_10861423 3300014325 Unclassified 969
48 Ga0213876_10176464 3300021384 Bacteria 1137
49 Ga0207705_10188930 3300025909 Bacteria 1557
50 Ga0207684_10006177 3300025910 Bacteria 10951
51 Ga0207707_10055887 3300025912 Bacteria 3434
52 Ga0207707_10245126 3300025912 Bacteria 1557
53 Ga0207671_10170617 3300025914 Bacteria 1689
54 Ga0207660_10024601 3300025917 Bacteria 4078
55 Ga0207660_10786941 3300025917 Bacteria 776
56 Ga0207652_10019166 3300025921 Bacteria 5622
57 Ga0207687_10038069 3300025927 Bacteria 3285
58 Ga0207709_10196394 3300025935 Bacteria 1437
59 Ga0207670_10021896 3300025936 Bacteria 3951
60 Ga0207670_10076828 3300025936 Bacteria 2325
61 Ga0207704_10279924 3300025938 Unclassified 1267
62 Ga0207689_10042997 3300025942 Bacteria 3735
63 Ga0207689_10285575 3300025942 Bacteria 1366
64 Ga0207712_10173550 3300025961 Bacteria 1687
65 Ga0207708_10131976 3300026075 Bacteria 1953
66 Ga0207702_10057685 3300026078 Bacteria 3301
67 Ga0207641_10188097 3300026088 Bacteria 1896
68 Ga0207641_10192737 3300026088 Bacteria 1874
69 Ga0207676_10473923 3300026095 Bacteria 1184
70 Ga0207674_10920741 3300026116 Unclassified 842
71 Ga0207683_10195036 3300026121 Bacteria 1840
72 Ga0268264_10290593 3300028381 Bacteria 1535
73 Ga0268264_10409863 3300028381 Bacteria 1304
74 Ga0307515_10052764 3300028794 Bacteria 6020
75 Ga0265338_10177643 3300028800 Bacteria 1626
76 Ga0307513_10007475 3300031456 Bacteria 14153
77 Ga0307513_10285574 3300031456 Bacteria 1425
78 Ga0307509_10000188 3300031507 Bacteria 97098
79 Ga0307509_10020335 3300031507 Bacteria 7532
80 Ga0307509_10152121 3300031507 Bacteria 2227
81 Ga0307509_10173236 3300031507 Bacteria 2034
82 Ga0307509_10434145 3300031507 Bacteria 1011
83 Ga0307508_10018751 3300031616 Bacteria 6290
84 Ga0316576_10042638 3300031727 Bacteria 3271
85 Ga0307516_10028089 3300031730 Bacteria 5698
86 Ga0307405_10041661 3300031731 Bacteria 2790
87 Ga0373949_0002152 3300035090 Bacteria 5166
88 Ga0373923_0129612 3300035111 Bacteria 1132
89 Ga0373936_0000016 3300035113 Bacteria 198547
90 Ga0373954_0081555 3300035118 Bacteria 1546
91 Ga0373956_0185108 3300035119 Unclassified 985
92 Ga0373943_0004010 3300035170 Bacteria 6699
93 Ga0373961_0000354 3300035241 Bacteria 19846
94 Ga0373924_0091809 3300035410 Bacteria 1300
95 Ga0373935_0297380 3300035692 Bacteria 1140
96 Ga0373937_0369332 3300036401 Bacteria 1360
97 Ga0373925_0472903 3300037068 Unclassified 1028
98 Ga0395905_0181932 3300037471 Bacteria 1973
99 Ga0436365_1312671 3300039437 Unclassified 1574
100 Ga0436360_0983832 3300039438 Bacteria 919
101 Ga0436361_0572875 3300039447 Unclassified 1126
102 Ga0451577_0270064 3300042876 Bacteria 1540
103 Ga0466959_0058239 3300045049 Bacteria 2814
104 Ga0466967_0950421 3300045976 Bacteria 855
105 Ga0495629_0466108 3300046459 Unclassified 854
106 Ga0495599_0115738 3300046678 Bacteria 1668
107 Ga0495613_0160072 3300046689 Bacteria 1602
108 Ga0495602_0179765 3300048088 Bacteria 1633
109 Ga0501034_0330819 3300049571 Bacteria 1455
110 Ga0501070_0032523 3300049586 Bacteria 4366
111 Ga0501227_000388 3300049665 Bacteria 9288
112 Ga0501230_002081 3300049667 Bacteria 2509
113 Ga0501225_0037677 3300049705 Bacteria 1333
114 Ga0501225_0075221 3300049705 Bacteria 964
115 Ga0501044_0515870 3300049823 Bacteria 1095
116 nmdc:mga09592_22275_c1 3300050508 Bacteria 5228
117 nmdc:mga09592_636562_c1 3300050508 Unclassified 911
118 nmdc:mga0qj67_427096_c1 3300050509 Bacteria 1068
119 nmdc:mga06r32_181406_c1 3300050510 Bacteria 2091
120 nmdc:mga0rr50_151577_c1 3300050513 Bacteria 1874
121 Ga0500578_0098385 3300053086 Bacteria 1853
122 Ga0500646_0007976 3300053090 Bacteria 2706
123 Ga0500566_0051956 3300053094 Bacteria 2343
124 Ga0500640_043755 3300053095 Bacteria 1965
125 Ga0500554_002247 3300053102 Bacteria 3768
126 Ga0500554_005474 3300053102 Bacteria 2772
127 Ga0500575_149321 3300053112 Bacteria 780
128 Ga0500595_000445 3300053119 Bacteria 25857
129 Ga0500597_183751 3300053120 Bacteria 885
130 Ga0500607_105566 3300053121 Bacteria 1391
131 Ga0500614_000751 3300053123 Bacteria 8280
132 Ga0500614_002307 3300053123 Bacteria 4275
133 Ga0500642_0136879 3300053130 Unclassified 1148
134 Ga0500559_0033292 3300053136 Bacteria 2218
135 Ga0500568_0045560 3300053139 Unclassified 1745
136 Ga0500585_053664 3300053144 Bacteria 1442
137 Ga0500603_002403 3300053150 Bacteria 4111
138 Ga0500636_0022661 3300053177 Bacteria 3713
139 Ga0500636_0114570 3300053177 Bacteria 1519
140 Ga0500637_0153059 3300053178 Bacteria 1332
141 Ga0500601_010565 3300053737 Bacteria 1034
142 Ga0068860_100067947
143 rootH2_10187312
144 Ga0070658_10204555
145 Ga0070690_100006492
146 Ga0068869_100164387
147 Ga0068869_100360519
148 Ga0070680_100069515
149 Ga0070680_100099346
150 Ga0070680_100106824
151 Ga0070689_100023291
152 Ga0070687_100187060
153 Ga0070713_100782823
154 Ga0070708_100232473
155 Ga0070678_100250832
156 Ga0070681_10046235
157 Ga0070681_10090727
158 Ga0070706_100019573
159 Ga0070698_100008912
160 Ga0070679_100003842
161 Ga0070679_100078298
162 Ga0070679_100380493
163 Ga0070686_100252468
164 Ga0068856_100271590
165 Ga0068864_100193337
166 Ga0068851_10213344
167 Ga0068863_100176955
168 Ga0068860_100369166
169 Ga0068862_100885130
170 Ga0070717_10042069
171 Ga0075430_100110953
172 Ga0075431_100181462
173 Ga0075431_100634592
174 Ga0075429_100014300
175 Ga0075429_100066451
176 Ga0068865_100106216
177 Ga0097620_100630191
178 Ga0075435_100078554
179 Ga0105245_10059455
180 Ga0105245_10417171
181 Ga0105243_10186811
182 Ga0105248_10789427
183 Ga0105237_10077075
184 Ga0105238_10207323
185 Ga0105238_10671089
186 Ga0105249_10173309
187 Ga0157378_10139636
188 Ga0163163_10861423
189 Ga0213876_10176464
190 Ga0207705_10188930
191 Ga0207684_10006177
192 Ga0207707_10055887
193 Ga0207707_10245126
194 Ga0207671_10170617
195 Ga0207660_10024601
196 Ga0207660_10786941
197 Ga0207652_10019166
198 Ga0207687_10038069
199 Ga0207709_10196394
200 Ga0207670_10021896
201 Ga0207670_10076828
202 Ga0207704_10279924
203 Ga0207689_10042997
204 Ga0207689_10285575
205 Ga0207712_10173550
206 Ga0207708_10131976
207 Ga0207702_10057685
208 Ga0207641_10188097
209 Ga0207641_10192737
210 Ga0207676_10473923
211 Ga0207674_10920741
212 Ga0207683_10195036
213 Ga0268264_10290593
214 Ga0268264_10409863
215 Ga0307515_10052764
216 Ga0265338_10177643
217 Ga0307513_10007475
218 Ga0307513_10285574
219 Ga0307509_10000188
220 Ga0307509_10020335
221 Ga0307509_10152121
222 Ga0307509_10173236
223 Ga0307509_10434145
224 Ga0307508_10018751
225 Ga0316576_10042638
226 Ga0307516_10028089
227 Ga0307405_10041661
228 Ga0373949_0002152
229 Ga0373923_0129612
230 Ga0373936_0000016
231 Ga0373954_0081555
232 Ga0373956_0185108
233 Ga0373943_0004010
234 Ga0373961_0000354
235 Ga0373924_0091809
236 Ga0373935_0297380
237 Ga0373937_0369332
238 Ga0373925_0472903
239 Ga0395905_0181932
240 Ga0436365_1312671
241 Ga0436360_0983832
242 Ga0436361_0572875
243 Ga0451577_0270064
244 Ga0466959_0058239
245 Ga0466967_0950421
246 Ga0495629_0466108
247 Ga0495599_0115738
248 Ga0495613_0160072
249 Ga0495602_0179765
250 Ga0501034_0330819
251 Ga0501070_0032523
252 Ga0501227_000388
253 Ga0501230_002081
254 Ga0501225_0037677
255 Ga0501225_0075221
256 Ga0501044_0515870
257 nmdc:mga09592_22275_c1
258 nmdc:mga09592_636562_c1
259 nmdc:mga0qj67_427096_c1
260 nmdc:mga06r32_181406_c1
261 nmdc:mga0rr50_151577_c1
262 Ga0500578_0098385
263 Ga0500646_0007976
264 Ga0500566_0051956
265 Ga0500640_043755
266 Ga0500554_002247
267 Ga0500554_005474
268 Ga0500575_149321
269 Ga0500595_000445
270 Ga0500597_183751
271 Ga0500607_105566
272 Ga0500614_000751
273 Ga0500614_002307
274 Ga0500642_0136879
275 Ga0500559_0033292
276 Ga0500568_0045560
277 Ga0500585_053664
278 Ga0500603_002403
279 Ga0500636_0022661
280 Ga0500636_0114570
281 Ga0500637_0153059
282 Ga0500601_010565

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07238

PilZ

PilZ domain

2

104

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xhf-assembly1.cif.gz_A crystal structure of the bef3-activated receiver domain of redox response regulator arca 0.901 109 223
6ifh-assembly1.cif.gz_A unphosphorylated spo0f from paenisporosarcina sp. tg-14 0.8901 110 222
4d6x-assembly1.cif.gz_A crystal structure of the receiver domain of ntrx from brucella abortus 0.89 112 222
3lte-assembly10.cif.gz_S crystal structure of response regulator (signal receiver domain) from bermanella marisrubri 0.889 111 222
6zxm-assembly3.cif.gz_E diguanylate cyclase dgcr in complex with c-di-gmp 0.8815 111 222
ID Description Score Start End Superfamily
af_P14375_1_129_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9056 110 223 3.40.50.2300
3lteE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8907 109 218 3.40.50.2300
3dzdB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8844 111 218 3.40.50.2300
1xhfB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8802 109 223 3.40.50.2300
2qr3A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8786 111 224 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3S4UN57-F1-model_v4 Aerobic respiration control protein ArcA 0.911 107 222 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-E1IBA0-F1-model_v4 Sigma-54 dependent DNA-binding reponse regulator 0.9106 110 223 GO:0000160
GO:0003677
AF-A0A317MMW2-F1-model_v4 DNA-binding response OmpR family regulator 0.9094 109 222 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A660L015-F1-model_v4 Two-component system KDP operon response regulator KdpE 0.901 108 222 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-F6EU90-F1-model_v4 Two component transcriptional regulator, winged helix family 0.9004 107 222 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map