F181298

General Info

Members Datasets Scaffolds Average Seq Length
141 65 282 602

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10010191|rootH2_100101915
Length 657
Sequence MSAAGKVRDFGLIRRVREDEDETLQKPLEWGLIRRLFTYTAPIKGKVTALALLTLIRSAQLPALGWVMSLIIKGPITGRDFAGIALGVAGYGLLALSTDVLFHFRQRYALEIGETVVNGLRADLFAKTQRQPMSFFHRVKIGRIIGRVTSDVEAVRTGIQDVLFVSVIQFGSMVFSAAVMLWSDAMLFLVVLAMAPILWMLNRHFRVKLSHHTRASQESFSRVTATLAESVGGIRVTQGFVRQETNSGLFRGLLADHARYNIALARTSAILTPLLELNSQFFVAILLMFGGWRVFHGDMTMGGLITFFLLANQFFAPISIIGNQYNQALVAMAGAERVFRLIDLKPDWEDDPAATPLRDPRATESPQVTSNKDQVSRNRASRPTGTARPDGAAATPPRSDAGGVARAPEPAGVRVEFQSVTFGYDPAKPVLHDVSFVAEPGETVALVGHTGSGKSSIINLAAKFYLPTRGEVIVDGREIRTITSHSLHRQMGMVQQQNLLFTGSVLENIRLGKPEATEAEVREAARRLDCLDLLEALPQGLATEVGERGAGLSLGQRQLVCFTRAMLADPRLVILDEATSSIDAITESRLQKALVELLRGRTSFVVAHRLSTIRHANLVLVLDQGRVIERGTHTALLAQGGHYAALYRQFVQMDERT

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
8 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
9 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
15 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
16 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
17 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
20 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
21 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
22 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
23 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
24 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
25 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
26 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
27 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
28 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
29 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
30 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
31 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
32 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
33 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
34 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
37 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
38 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
41 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
42 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
43 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
44 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
45 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
46 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
47 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
48 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
57 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
58 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
59 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
60 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
62 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
63 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
64 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
65 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.16
Stem 0
Stem Tuber 0
Unclassified 4.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10010191 3300003320 Bacteria 10177
2 SwRhRL2b_contig_3852480 2162886007 Bacteria 7791
3 rootL2_10044584 3300003322 Bacteria 3850
4 rootL2_10116093 3300003322 Bacteria 10894
5 Ga0065704_10070412 3300005289 Bacteria 26065
6 Ga0065707_10000518 3300005295 Bacteria 31549
7 Ga0065707_10090909 3300005295 Bacteria 4040
8 Ga0065707_10112687 3300005295 Bacteria 2352
9 Ga0070682_100003803 3300005337 Bacteria 8389
10 Ga0070682_100006137 3300005337 Bacteria 6732
11 Ga0070699_100006109 3300005518 Bacteria 10539
12 Ga0070699_100034435 3300005518 Bacteria 4377
13 Ga0068861_100004906 3300005719 Bacteria 9010
14 Ga0068862_100026844 3300005844 Bacteria 4844
15 Ga0081539_10018391 3300005985 Unclassified 4852
16 Ga0075431_100146540 3300006847 Bacteria 2433
17 Ga0075429_100000170 3300006880 Bacteria 41847
18 Ga0075429_100022812 3300006880 Bacteria 5426
19 Ga0075429_100065841 3300006880 Bacteria 3155
20 Ga0114129_10000806 3300009147 Bacteria 40261
21 Ga0114129_10023188 3300009147 Bacteria 8803
22 Ga0114129_10229053 3300009147 Bacteria 2503
23 Ga0105249_10030238 3300009553 Bacteria 4895
24 Ga0105246_10064922 3300011119 Unclassified 2552
25 Ga0163163_10134153 3300014325 Bacteria 2516
26 Ga0207678_10010736 3300026067 Bacteria 8046
27 Ga0207675_100009820 3300026118 Bacteria 8960
28 Ga0265337_1001391 3300028556 Bacteria 11878
29 Ga0265337_1003199 3300028556 Bacteria 7181
30 Ga0265319_1000552 3300028563 Bacteria 25357
31 Ga0265319_1000942 3300028563 Bacteria 18246
32 Ga0265319_1006482 3300028563 Bacteria 5415
33 Ga0265319_1009578 3300028563 Bacteria 4113
34 Ga0265319_1013663 3300028563 Bacteria 3215
35 Ga0265319_1019316 3300028563 Bacteria 2546
36 Ga0265334_10000996 3300028573 Bacteria 14011
37 Ga0265318_10000038 3300028577 Bacteria 136367
38 Ga0265318_10000126 3300028577 Bacteria 70529
39 Ga0265318_10000370 3300028577 Bacteria 35331
40 Ga0265318_10002869 3300028577 Bacteria 8984
41 Ga0265318_10004808 3300028577 Bacteria 6466
42 Ga0265318_10015515 3300028577 Bacteria 3168
43 Ga0265323_10000568 3300028653 Bacteria 20392
44 Ga0265322_10015906 3300028654 Bacteria 2171
45 Ga0265336_10000976 3300028666 Bacteria 14180
46 Ga0265338_10000391 3300028800 Bacteria 78469
47 Ga0265338_10001276 3300028800 Bacteria 41444
48 Ga0265338_10003727 3300028800 Bacteria 21199
49 Ga0265338_10003930 3300028800 Bacteria 20483
50 Ga0265338_10007831 3300028800 Bacteria 13130
51 Ga0265338_10030741 3300028800 Bacteria 5281
52 Ga0265338_10042831 3300028800 Bacteria 4208
53 Ga0265324_10001682 3300029957 Bacteria 12195
54 Ga0265332_10026650 3300031238 Bacteria 2535
55 Ga0265328_10015675 3300031239 Bacteria 2965
56 Ga0265320_10000111 3300031240 Bacteria 70843
57 Ga0265320_10002949 3300031240 Bacteria 11653
58 Ga0265320_10006095 3300031240 Bacteria 7647
59 Ga0265320_10008959 3300031240 Bacteria 6076
60 Ga0265320_10009883 3300031240 Bacteria 5716
61 Ga0265320_10010794 3300031240 Bacteria 5414
62 Ga0265320_10010935 3300031240 Bacteria 5365
63 Ga0265320_10011957 3300031240 Bacteria 5080
64 Ga0265320_10015042 3300031240 Unclassified 4382
65 Ga0265325_10008575 3300031241 Bacteria 6025
66 Ga0265325_10020430 3300031241 Bacteria 3650
67 Ga0265340_10013814 3300031247 Unclassified 4232
68 Ga0265331_10010302 3300031250 Bacteria 5181
69 Ga0265327_10000029 3300031251 Bacteria 352607
70 Ga0265327_10000709 3300031251 Bacteria 52606
71 Ga0265327_10003070 3300031251 Bacteria 16490
72 Ga0265316_10002878 3300031344 Bacteria 17610
73 Ga0265316_10006832 3300031344 Bacteria 10842
74 Ga0265316_10021423 3300031344 Bacteria 5474
75 Ga0265316_10073261 3300031344 Bacteria 2638
76 Ga0265313_10000655 3300031595 Bacteria 35693
77 Ga0265313_10003518 3300031595 Bacteria 12624
78 Ga0265313_10008185 3300031595 Bacteria 6987
79 Ga0265313_10009526 3300031595 Bacteria 6290
80 Ga0307508_10000014 3300031616 Bacteria 226567
81 Ga0316579_10029973 3300031691 Bacteria 2484
82 Ga0265314_10002428 3300031711 Bacteria 19111
83 Ga0265314_10002792 3300031711 Bacteria 17427
84 Ga0265342_10009697 3300031712 Bacteria 6750
85 Ga0265342_10032619 3300031712 Bacteria 3211
86 Ga0316577_10000154 3300031733 Bacteria 21296
87 Ga0316584_0002546 3300036712 Bacteria 11565
88 Ga0395905_0062414 3300037471 Bacteria 3486
89 Ga0451577_0001442 3300042876 Bacteria 31672
90 Ga0451577_0010019 3300042876 Bacteria 9078
91 Ga0451577_0034702 3300042876 Bacteria 4545
92 Ga0451577_0046485 3300042876 Unclassified 3884
93 Ga0453683_0000523 3300044673 Bacteria 43101
94 Ga0453683_0009748 3300044673 Bacteria 6402
95 Ga0453684_0000012 3300044712 Bacteria 1062512
96 Ga0453684_0000023 3300044712 Bacteria 857153
97 Ga0453684_0000726 3300044712 Bacteria 116252
98 Ga0453684_0001036 3300044712 Bacteria 88911
99 Ga0453684_0004564 3300044712 Bacteria 28954
100 Ga0453684_0007673 3300044712 Bacteria 19729
101 Ga0453684_0012625 3300044712 Bacteria 13887
102 Ga0453684_0015584 3300044712 Bacteria 11999
103 Ga0453684_0025482 3300044712 Bacteria 8584
104 Ga0453684_0039826 3300044712 Bacteria 6393
105 Ga0453684_0081901 3300044712 Bacteria 4023
106 Ga0453684_0086832 3300044712 Bacteria 3880
107 Ga0453684_0150326 3300044712 Bacteria 2768
108 Ga0453684_0196965 3300044712 Bacteria 2351
109 Ga0451576_0008815 3300045051 Bacteria 11785
110 Ga0451576_0041438 3300045051 Bacteria 4868
111 Ga0451576_0042310 3300045051 Unclassified 4810
112 Ga0451576_0192878 3300045051 Bacteria 2128
113 Ga0501031_0016174 3300049568 Bacteria 4845
114 Ga0501032_0003163 3300049569 Bacteria 12671
115 Ga0501032_0004832 3300049569 Bacteria 10102
116 Ga0501032_0105692 3300049569 Bacteria 1865
117 Ga0501033_0005124 3300049570 Bacteria 10423
118 Ga0501034_0178830 3300049571 Bacteria 2087
119 Ga0501038_0001234 3300049574 Bacteria 23204
120 Ga0501042_0010725 3300049578 Bacteria 6159
121 Ga0501046_0009591 3300049580 Bacteria 8352
122 Ga0501046_0011017 3300049580 Bacteria 7748
123 Ga0501046_0018935 3300049580 Bacteria 5718
124 Ga0501047_0001214 3300049581 Bacteria 25557
125 Ga0501070_0054174 3300049586 Bacteria 3326
126 Ga0501075_0059352 3300049591 Unclassified 2881
127 Ga0501080_0044822 3300049742 Bacteria 4116
128 Ga0501083_0001025 3300049744 Bacteria 18620
129 Ga0501083_0009963 3300049744 Bacteria 6707
130 Ga0501035_0000460 3300049822 Bacteria 45701
131 Ga0501035_0059499 3300049822 Bacteria 3402
132 Ga0501044_0000283 3300049823 Bacteria 64619
133 Ga0501044_0063983 3300049823 Bacteria 3756
134 Ga0501044_0098012 3300049823 Bacteria 2951
135 nmdc:mga05p37_33606_c1 3300050507 Bacteria 6282
136 nmdc:mga05p37_476_c1 3300050507 Bacteria 43712
137 nmdc:mga05p37_75182_c1 3300050507 Bacteria 4158
138 nmdc:mga09592_284_c1 3300050508 Bacteria 36913
139 nmdc:mga09592_58272_c1 3300050508 Bacteria 3266
140 nmdc:mga0a205_4088_c1 3300050515 Bacteria 13053
141 Ga0501084_0000709 3300054114 Bacteria 25468
142 rootH2_10010191
143 SwRhRL2b_contig_3852480
144 rootL2_10044584
145 rootL2_10116093
146 Ga0065704_10070412
147 Ga0065707_10000518
148 Ga0065707_10090909
149 Ga0065707_10112687
150 Ga0070682_100003803
151 Ga0070682_100006137
152 Ga0070699_100006109
153 Ga0070699_100034435
154 Ga0068861_100004906
155 Ga0068862_100026844
156 Ga0081539_10018391
157 Ga0075431_100146540
158 Ga0075429_100000170
159 Ga0075429_100022812
160 Ga0075429_100065841
161 Ga0114129_10000806
162 Ga0114129_10023188
163 Ga0114129_10229053
164 Ga0105249_10030238
165 Ga0105246_10064922
166 Ga0163163_10134153
167 Ga0207678_10010736
168 Ga0207675_100009820
169 Ga0265337_1001391
170 Ga0265337_1003199
171 Ga0265319_1000552
172 Ga0265319_1000942
173 Ga0265319_1006482
174 Ga0265319_1009578
175 Ga0265319_1013663
176 Ga0265319_1019316
177 Ga0265334_10000996
178 Ga0265318_10000038
179 Ga0265318_10000126
180 Ga0265318_10000370
181 Ga0265318_10002869
182 Ga0265318_10004808
183 Ga0265318_10015515
184 Ga0265323_10000568
185 Ga0265322_10015906
186 Ga0265336_10000976
187 Ga0265338_10000391
188 Ga0265338_10001276
189 Ga0265338_10003727
190 Ga0265338_10003930
191 Ga0265338_10007831
192 Ga0265338_10030741
193 Ga0265338_10042831
194 Ga0265324_10001682
195 Ga0265332_10026650
196 Ga0265328_10015675
197 Ga0265320_10000111
198 Ga0265320_10002949
199 Ga0265320_10006095
200 Ga0265320_10008959
201 Ga0265320_10009883
202 Ga0265320_10010794
203 Ga0265320_10010935
204 Ga0265320_10011957
205 Ga0265320_10015042
206 Ga0265325_10008575
207 Ga0265325_10020430
208 Ga0265340_10013814
209 Ga0265331_10010302
210 Ga0265327_10000029
211 Ga0265327_10000709
212 Ga0265327_10003070
213 Ga0265316_10002878
214 Ga0265316_10006832
215 Ga0265316_10021423
216 Ga0265316_10073261
217 Ga0265313_10000655
218 Ga0265313_10003518
219 Ga0265313_10008185
220 Ga0265313_10009526
221 Ga0307508_10000014
222 Ga0316579_10029973
223 Ga0265314_10002428
224 Ga0265314_10002792
225 Ga0265342_10009697
226 Ga0265342_10032619
227 Ga0316577_10000154
228 Ga0316584_0002546
229 Ga0395905_0062414
230 Ga0451577_0001442
231 Ga0451577_0010019
232 Ga0451577_0034702
233 Ga0451577_0046485
234 Ga0453683_0000523
235 Ga0453683_0009748
236 Ga0453684_0000012
237 Ga0453684_0000023
238 Ga0453684_0000726
239 Ga0453684_0001036
240 Ga0453684_0004564
241 Ga0453684_0007673
242 Ga0453684_0012625
243 Ga0453684_0015584
244 Ga0453684_0025482
245 Ga0453684_0039826
246 Ga0453684_0081901
247 Ga0453684_0086832
248 Ga0453684_0150326
249 Ga0453684_0196965
250 Ga0451576_0008815
251 Ga0451576_0041438
252 Ga0451576_0042310
253 Ga0451576_0192878
254 Ga0501031_0016174
255 Ga0501032_0003163
256 Ga0501032_0004832
257 Ga0501032_0105692
258 Ga0501033_0005124
259 Ga0501034_0178830
260 Ga0501038_0001234
261 Ga0501042_0010725
262 Ga0501046_0009591
263 Ga0501046_0011017
264 Ga0501046_0018935
265 Ga0501047_0001214
266 Ga0501070_0054174
267 Ga0501075_0059352
268 Ga0501080_0044822
269 Ga0501083_0001025
270 Ga0501083_0009963
271 Ga0501035_0000460
272 Ga0501035_0059499
273 Ga0501044_0000283
274 Ga0501044_0063983
275 Ga0501044_0098012
276 nmdc:mga05p37_33606_c1
277 nmdc:mga05p37_476_c1
278 nmdc:mga05p37_75182_c1
279 nmdc:mga09592_284_c1
280 nmdc:mga09592_58272_c1
281 nmdc:mga0a205_4088_c1
282 Ga0501084_0000709

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00664

ABC_membrane

ABC transporter transmembrane region

47

318

0.98

PF00005

ABC_tran

ABC transporter

431

580

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q7l-assembly1.cif.gz_A structure of nbd288 of tm287/288 0.9386 366 602
5eum-assembly1.cif.gz_B 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.938 355 602
5eum-assembly1.cif.gz_A 1.8 angstrom crystal structure of atp-binding component of fused lipid transporter subunits of abc superfamily from haemophilus influenzae. 0.9325 355 602
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.932 368 601
4q7l-assembly2.cif.gz_B structure of nbd288 of tm287/288 0.9316 366 604
ID Description Score Start End Superfamily
af_O53645_932_1184_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9497 359 608 3.40.50.300
af_P0AAG5_335_579_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9421 362 606 3.40.50.300
af_Q2FVJ2_326_574_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9417 359 607 3.40.50.300
5eumB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9417 355 602 3.40.50.300
5mkkA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9413 357 609 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A519KVF5-F1-model_v4 ATP-binding cassette domain-containing protein 0.9647 355 611 GO:0005524
GO:0015421
GO:0016887
AF-A0A7V9FMT5-F1-model_v4 ATP-binding cassette domain-containing protein 0.9573 383 606 GO:0005524
GO:0016887
GO:0034040
AF-A0A519KVF5-F1-model_v4 ATP-binding cassette domain-containing protein 0.9539 355 611 GO:0005524
GO:0015421
GO:0016887
AF-A0A7Z9YWK5-F1-model_v4 ATP-binding cassette domain-containing protein 0.9479 438 599 GO:0005524
GO:0016887
GO:0034040
AF-A0A7C7CQ99-F1-model_v4 ATP-binding cassette domain-containing protein 0.9477 380 602 GO:0005524
GO:0012505
GO:0016887
GO:0042626

Map