F179722

General Info

Members Datasets Scaffolds Average Seq Length
140 103 280 327

Family's Representative Sequence

Representative Sequence 3300025910|Ga0207684_10197475|Ga0207684_101974752
Length 360
Sequence MTQNDPKTPRADQFQGDREAFQVASGNTMKAIVYTTYGSPDVLQLKEVAKPTPQDNEVLVHVHAASVNAADWHLMRGAPFLARLANGLQKPKNTKLGADVAGRVEAVGRNVTQFQVGDEVFGCIPLHELGSFAEYVRAHEDAVALKPARMTFEQAAAVPVAAFTALQGLRDKGQIKLGQKVLVNGASGGVGTAAVQIAKSFGTEVTGVCSTRNVDMVRSLGADHVIDYTQEDFTQNGQRYDLIFDAVGNRSVSDFKRALSPNGMCAVAGFTTLPHLFQVLVLGSWVSRTGRKKIGLMETAKPNQKDLVFIKELLEAGKVVPVIDRTYPLREVPEAIRYLEAGHARGKVVITVEQNDNTSL

Samples

Sample ID Description Type Environment
1 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
19 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
26 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
27 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
28 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
43 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
48 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
49 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
51 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
52 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
57 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
58 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
59 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
60 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
61 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
62 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
63 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
64 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
67 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
71 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
72 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
73 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
74 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
75 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
83 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
84 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
85 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
86 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
87 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
89 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
90 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
94 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
95 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
96 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
97 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
98 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
99 2773857925 Microvirga vignae BR3299 Isolate Unclassified
100 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
101 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
102 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
103 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95
Metatranscriptomes 0.71
Isolates 4.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.71
Nodule 0
Rhizoplane 0.71
Rhizosphere 91.43
Stem 0
Stem Tuber 0
Unclassified 12.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207684_10197475 3300025910 Bacteria 1735
2 rootH1_10121235 3300003323 Bacteria 6485
3 Ga0065707_10086483 3300005295 Bacteria 5436
4 Ga0065707_10090763 3300005295 Bacteria 4072
5 Ga0070703_10023103 3300005406 Bacteria 1829
6 Ga0070703_10049870 3300005406 Unclassified 1334
7 Ga0070714_100028584 3300005435 Bacteria 4628
8 Ga0070708_100005390 3300005445 Bacteria 10149
9 Ga0070708_100017187 3300005445 Bacteria 6026
10 Ga0070708_100049542 3300005445 Bacteria 3716
11 Ga0070708_100098745 3300005445 Unclassified 2670
12 Ga0070708_100175970 3300005445 Bacteria 1999
13 Ga0070706_100014705 3300005467 Bacteria 7230
14 Ga0070706_100143753 3300005467 Bacteria 2227
15 Ga0070706_100270317 3300005467 Bacteria 1586
16 Ga0070707_100039377 3300005468 Bacteria 4517
17 Ga0070707_100178933 3300005468 Bacteria 2067
18 Ga0070707_100200456 3300005468 Bacteria 1945
19 Ga0070698_100280923 3300005471 Bacteria 1596
20 Ga0070698_100365720 3300005471 Unclassified 1374
21 Ga0070699_100003909 3300005518 Bacteria 13160
22 Ga0070699_100017342 3300005518 Bacteria 6183
23 Ga0070699_100047959 3300005518 Unclassified 3696
24 Ga0070699_100467226 3300005518 Unclassified 1144
25 Ga0070697_100009459 3300005536 Bacteria 7615
26 Ga0070697_100091293 3300005536 Bacteria 2518
27 Ga0070697_100091427 3300005536 Bacteria 2516
28 Ga0070704_100480596 3300005549 Bacteria 1075
29 Ga0068859_100074755 3300005617 Bacteria 3428
30 Ga0068859_100077457 3300005617 Bacteria 3366
31 Ga0068864_100306180 3300005618 Bacteria 1489
32 Ga0068870_10069138 3300005840 Unclassified 1921
33 Ga0081455_10000120 3300005937 Bacteria 89920
34 Ga0070717_10007969 3300006028 Bacteria 7890
35 Ga0070717_10134099 3300006028 Bacteria 2131
36 Ga0070717_10210409 3300006028 Bacteria 1706
37 Ga0075430_100026301 3300006846 Bacteria 4952
38 Ga0075431_100014756 3300006847 Bacteria 7910
39 Ga0075431_100063627 3300006847 Bacteria 3807
40 Ga0075433_10016966 3300006852 Bacteria 6018
41 Ga0075429_100022190 3300006880 Bacteria 5507
42 Ga0097620_100074754 3300006931 Bacteria 3428
43 Ga0097620_100077461 3300006931 Bacteria 3366
44 Ga0114129_10020502 3300009147 Bacteria 9402
45 Ga0114129_10255068 3300009147 Bacteria 2353
46 Ga0105243_10217341 3300009148 Bacteria 1687
47 Ga0105243_10333610 3300009148 Unclassified 1386
48 Ga0157377_10296070 3300014745 Bacteria 1066
49 Ga0157376_10311775 3300014969 Bacteria 1493
50 Ga0213875_10028560 3300021388 Bacteria 2648
51 Ga0207653_10011923 3300025885 Bacteria 2710
52 Ga0207692_10062977 3300025898 Bacteria 1926
53 Ga0207643_10068752 3300025908 Bacteria 2035
54 Ga0207684_10022754 3300025910 Bacteria 5351
55 Ga0207684_10132749 3300025910 Bacteria 2137
56 Ga0207684_10192306 3300025910 Bacteria 1760
57 Ga0207693_10113245 3300025915 Bacteria 2128
58 Ga0207646_10006032 3300025922 Bacteria 12626
59 Ga0207646_10014312 3300025922 Bacteria 7539
60 Ga0207646_10031693 3300025922 Bacteria 4785
61 Ga0207646_10035388 3300025922 Unclassified 4510
62 Ga0207646_10074346 3300025922 Bacteria 3035
63 Ga0207646_10131532 3300025922 Bacteria 2252
64 Ga0207646_10195290 3300025922 Bacteria 1828
65 Ga0207664_10125032 3300025929 Bacteria 2158
66 Ga0207670_10051495 3300025936 Unclassified 2765
67 Ga0207708_10259704 3300026075 Bacteria 1402
68 Ga0207675_100390861 3300026118 Unclassified 1369
69 Ga0268265_10128220 3300028380 Bacteria 2104
70 Ga0265323_10025380 3300028653 Bacteria 2244
71 Ga0265338_10013541 3300028800 Bacteria 9195
72 Ga0265327_10109903 3300031251 Bacteria 1319
73 Ga0265316_10088689 3300031344 Bacteria 2361
74 Ga0316576_10141795 3300031727 Bacteria 1810
75 Ga0316578_10029241 3300031728 Bacteria 3127
76 Ga0316578_10057625 3300031728 Unclassified 2283
77 Ga0307410_10102046 3300031852 Bacteria 2058
78 Ga0307407_10017919 3300031903 Unclassified 3568
79 Ga0307416_100650354 3300032002 Unclassified 1139
80 Ga0307507_10000008 3300033179 Bacteria 266336
81 Ga0307510_10049951 3300033180 Bacteria 4443
82 Ga0316596_1013900 3300033541 Unclassified 1990
83 Ga0373954_0009402 3300035118 Unclassified 4298
84 Ga0373956_0000109 3300035119 Bacteria 28354
85 Ga0373927_0000659 3300035695 Bacteria 26200
86 Ga0373927_0002099 3300035695 Bacteria 14717
87 Ga0373937_0204399 3300036401 Bacteria 1857
88 Ga0316584_0123912 3300036712 Bacteria 1930
89 Ga0436364_1222105 3300037853 Bacteria 4135
90 Ga0400484_02142 3300038725 Bacteria 12185
91 Ga0400490_25113 3300038726 Bacteria 2034
92 Ga0242420_021206 3300038996 Bacteria 1162
93 Ga0439453_0006059 3300041408 Bacteria 1868
94 Ga0439450_002324 3300042008 Bacteria 2974
95 Ga0439463_003783 3300042016 Bacteria 3814
96 Ga0439435_0022387 3300042436 Bacteria 1649
97 Ga0439444_0021474 3300042437 Bacteria 1144
98 Ga0439460_0016783 3300042461 Unclassified 1955
99 Ga0451577_0405245 3300042876 Unclassified 1238
100 Ga0439440_0003715 3300042993 Bacteria 2964
101 Ga0453683_0000747 3300044673 Bacteria 32801
102 Ga0466965_0001733 3300044683 Bacteria 8983
103 Ga0453684_0002289 3300044712 Bacteria 47050
104 Ga0466968_0001760 3300044735 Bacteria 7810
105 Ga0466960_0001083 3300044901 Bacteria 9781
106 Ga0451576_0004888 3300045051 Bacteria 17124
107 Ga0451576_0022056 3300045051 Bacteria 6910
108 Ga0495616_0071647 3300046513 Bacteria 1675
109 Ga0496110_0028172 3300048913 Bacteria 4822
110 Ga0501033_0107620 3300049570 Bacteria 2031
111 Ga0501036_0006845 3300049572 Bacteria 9263
112 Ga0501038_0255662 3300049574 Bacteria 1386
113 Ga0501039_0014749 3300049575 Bacteria 5979
114 Ga0501040_0000901 3300049576 Bacteria 18641
115 Ga0501041_0000634 3300049577 Bacteria 18382
116 Ga0501072_0095902 3300049588 Bacteria 2357
117 Ga0501075_0004473 3300049591 Bacteria 9466
118 Ga0501076_0003269 3300049592 Bacteria 11348
119 Ga0501223_002438 3300049663 Bacteria 4131
120 Ga0501079_0005988 3300049741 Bacteria 9105
121 Ga0501081_0017908 3300049743 Bacteria 4698
122 Ga0501035_0128770 3300049822 Bacteria 2208
123 Ga0501045_0124758 3300049824 Bacteria 1912
124 nmdc:mga05p37_112639_c1 3300050507 Unclassified 3346
125 nmdc:mga05p37_76422_c1 3300050507 Bacteria 4123
126 nmdc:mga05p37_87493_c1 3300050507 Bacteria 3840
127 nmdc:mga0qj67_6720_c1 3300050509 Bacteria 8448
128 nmdc:mga06r32_8932_c1 3300050510 Bacteria 9032
129 nmdc:mga0a205_3705_c1 3300050515 Bacteria 13674
130 Ga0495601_0043323 3300053077 Bacteria 2827
131 Ga0500651_0076198 3300053093 Bacteria 2083
132 Ga0501084_0006931 3300054114 Bacteria 9332
133 Ga0501082_0005632 3300060353 Bacteria 10873
134 Ga0530510_0045305 3300061734 Bacteria 3177
135 2512037041 2511231221 Bacteria 6846400
136 2774871338 2773857925 Bacteria 6472445
137 2857736965 2857733635 Bacteria 3532004
138 2870726015 2870721527 Bacteria 9689237
139 2882460267 2882456835 Bacteria 6863978
140 2917555953 2917554339 Bacteria 4987857
141 Ga0207684_10197475
142 rootH1_10121235
143 Ga0065707_10086483
144 Ga0065707_10090763
145 Ga0070703_10023103
146 Ga0070703_10049870
147 Ga0070714_100028584
148 Ga0070708_100005390
149 Ga0070708_100017187
150 Ga0070708_100049542
151 Ga0070708_100098745
152 Ga0070708_100175970
153 Ga0070706_100014705
154 Ga0070706_100143753
155 Ga0070706_100270317
156 Ga0070707_100039377
157 Ga0070707_100178933
158 Ga0070707_100200456
159 Ga0070698_100280923
160 Ga0070698_100365720
161 Ga0070699_100003909
162 Ga0070699_100017342
163 Ga0070699_100047959
164 Ga0070699_100467226
165 Ga0070697_100009459
166 Ga0070697_100091293
167 Ga0070697_100091427
168 Ga0070704_100480596
169 Ga0068859_100074755
170 Ga0068859_100077457
171 Ga0068864_100306180
172 Ga0068870_10069138
173 Ga0081455_10000120
174 Ga0070717_10007969
175 Ga0070717_10134099
176 Ga0070717_10210409
177 Ga0075430_100026301
178 Ga0075431_100014756
179 Ga0075431_100063627
180 Ga0075433_10016966
181 Ga0075429_100022190
182 Ga0097620_100074754
183 Ga0097620_100077461
184 Ga0114129_10020502
185 Ga0114129_10255068
186 Ga0105243_10217341
187 Ga0105243_10333610
188 Ga0157377_10296070
189 Ga0157376_10311775
190 Ga0213875_10028560
191 Ga0207653_10011923
192 Ga0207692_10062977
193 Ga0207643_10068752
194 Ga0207684_10022754
195 Ga0207684_10132749
196 Ga0207684_10192306
197 Ga0207693_10113245
198 Ga0207646_10006032
199 Ga0207646_10014312
200 Ga0207646_10031693
201 Ga0207646_10035388
202 Ga0207646_10074346
203 Ga0207646_10131532
204 Ga0207646_10195290
205 Ga0207664_10125032
206 Ga0207670_10051495
207 Ga0207708_10259704
208 Ga0207675_100390861
209 Ga0268265_10128220
210 Ga0265323_10025380
211 Ga0265338_10013541
212 Ga0265327_10109903
213 Ga0265316_10088689
214 Ga0316576_10141795
215 Ga0316578_10029241
216 Ga0316578_10057625
217 Ga0307410_10102046
218 Ga0307407_10017919
219 Ga0307416_100650354
220 Ga0307507_10000008
221 Ga0307510_10049951
222 Ga0316596_1013900
223 Ga0373954_0009402
224 Ga0373956_0000109
225 Ga0373927_0000659
226 Ga0373927_0002099
227 Ga0373937_0204399
228 Ga0316584_0123912
229 Ga0436364_1222105
230 Ga0400484_02142
231 Ga0400490_25113
232 Ga0242420_021206
233 Ga0439453_0006059
234 Ga0439450_002324
235 Ga0439463_003783
236 Ga0439435_0022387
237 Ga0439444_0021474
238 Ga0439460_0016783
239 Ga0451577_0405245
240 Ga0439440_0003715
241 Ga0453683_0000747
242 Ga0466965_0001733
243 Ga0453684_0002289
244 Ga0466968_0001760
245 Ga0466960_0001083
246 Ga0451576_0004888
247 Ga0451576_0022056
248 Ga0495616_0071647
249 Ga0496110_0028172
250 Ga0501033_0107620
251 Ga0501036_0006845
252 Ga0501038_0255662
253 Ga0501039_0014749
254 Ga0501040_0000901
255 Ga0501041_0000634
256 Ga0501072_0095902
257 Ga0501075_0004473
258 Ga0501076_0003269
259 Ga0501223_002438
260 Ga0501079_0005988
261 Ga0501081_0017908
262 Ga0501035_0128770
263 Ga0501045_0124758
264 nmdc:mga05p37_112639_c1
265 nmdc:mga05p37_76422_c1
266 nmdc:mga05p37_87493_c1
267 nmdc:mga0qj67_6720_c1
268 nmdc:mga06r32_8932_c1
269 nmdc:mga0a205_3705_c1
270 Ga0495601_0043323
271 Ga0500651_0076198
272 Ga0501084_0006931
273 Ga0501082_0005632
274 Ga0530510_0045305
275 2512037041
276 2774871338
277 2857736965
278 2870726015
279 2882460267
280 2917555953

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

189

300

0.87

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

220

350

0.87

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

54

148

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dup-assembly1.cif.gz_A crystal structure of a quinone oxidoreductase from rhizobium etli cfn 42 0.8828 1 239
4dup-assembly1.cif.gz_B crystal structure of a quinone oxidoreductase from rhizobium etli cfn 42 0.8768 1 239
3fbg-assembly1.cif.gz_B crystal structure of a putative arginate lyase from staphylococcus haemolyticus 0.8689 1 239
5a3j-assembly8.cif.gz_H crystal structure of the chloroplastic gamma-ketol reductase from arabidopsis thaliana bound to 13-oxo-9(z),11(e),15(z)- octadecatrienoic acid. 0.8659 1 255
4j6f-assembly1.cif.gz_B crystal structure of putative alcohol dehydrogenase from sinorhizobium meliloti 1021, nysgrc-target 012230 0.8656 1 241
ID Description Score Start End Superfamily
af_B6TXY3_219_333_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9354 143 241 3.90.180.10
af_M0R3N4_1_117_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9172 1 125 3.90.180.10
af_A0A0R0I1N1_1_153_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.916 2 144 3.90.180.10
af_O45496_127_286_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9131 132 237 3.40.50.720
af_Q0J0N7_12_137_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9112 1 131 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A538GLC4-F1-model_v4 NAD(P)-dependent alcohol dehydrogenase 0.9862 1 241 GO:0008270
GO:0016491
AF-A0A529SFX9-F1-model_v4 NADP-dependent oxidoreductase 0.9817 68 175 GO:0016491
AF-A0A661TMC0-F1-model_v4 NAD(P)-dependent alcohol dehydrogenase 0.9778 1 212 GO:0008270
GO:0016491
AF-A0A1G8GBF1-F1-model_v4 Alcohol dehydrogenase GroES-like domain-containing protein 0.9773 1 130
AF-A0A4Q2JFA4-F1-model_v4 NAD(P)-dependent alcohol dehydrogenase 0.9724 1 182 GO:0003723
GO:0008270
GO:0016491

Map