F175771

General Info

Members Datasets Scaffolds Average Seq Length
139 101 139 386

Family's Representative Sequence

Representative Sequence 3300005616|Ga0068852_100156262|Ga0068852_1001562622
Length 460
Sequence LWARQVPCATGADTRADGGRSDRRTDRFSLDESGVRAGPKFVRRGALTPASRDYNLGVFYDVLIVGGGPAGSSCARVLTAGGARVAIVDRAAFPRVKLCGGWVSAAIWDALELAPREYPGGLWEWHTCHVHHRGESHAVPCHGWFIRRVELDDFLLRRSGAALHLGLSVRDIVRDGEGLWSIGDLRARHLVGAGGTHCPVARLFPPPRPTAAVGAQENEFALDRAAIARARAGRDGEPELYLHDALDGYSWNVPKTDWLNVGSGTADPNQVRRAWQSARAHFEGAGHLPAQASAELNAMKGHTYYLYDPAHLRGAGAANDGGPGSVLLCGDSLGLAHPLTAEGILPAVISGRMAGEAILAGAPASYGARLASHPVLADYGRVFRLRQAATSRLRRRGREVGRSNGDGASRATRIKHRAIARGFAWMFSGARLPAPRLLDLVLGVVDRGARDGVEPAGRPA

Samples

Sample ID Description Type Environment
1 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
55 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
61 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
64 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
65 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
78 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
79 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
80 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
81 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
82 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
91 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
92 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
93 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
96 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
97 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
98 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
99 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
100 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
101 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.47
Nodule 0
Rhizoplane 1.44
Rhizosphere 87.77
Stem 0
Stem Tuber 0
Unclassified 4.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100210872 3300005329 Bacteria 1845
2 Ga0070690_100007313 3300005330 Bacteria 6325
3 Ga0070670_100094942 3300005331 Bacteria 2565
4 Ga0068869_100090056 3300005334 Bacteria 2305
5 Ga0068869_100172796 3300005334 Bacteria 1689
6 Ga0070666_10061477 3300005335 Bacteria 2543
7 Ga0070682_100023999 3300005337 Bacteria 3625
8 Ga0070688_100038257 3300005365 Bacteria 2928
9 Ga0070701_10020443 3300005438 Bacteria 3144
10 Ga0070700_100090457 3300005441 Bacteria 1996
11 Ga0070678_100008153 3300005456 Bacteria 6261
12 Ga0070681_10022238 3300005458 Bacteria 6366
13 Ga0070685_10080394 3300005466 Bacteria 1953
14 Ga0070706_100054772 3300005467 Bacteria 3682
15 Ga0070698_100001106 3300005471 Bacteria 29742
16 Ga0070698_100216335 3300005471 Bacteria 1850
17 Ga0070679_100073055 3300005530 Bacteria 3423
18 Ga0070686_100028798 3300005544 Bacteria 3371
19 Ga0068855_100265098 3300005563 Bacteria 1912
20 Ga0068856_100063688 3300005614 Bacteria 3643
21 Ga0068856_100161967 3300005614 Bacteria 2248
22 Ga0068856_100195817 3300005614 Unclassified 2035
23 Ga0068852_100156262 3300005616 Unclassified 2125
24 Ga0068859_100223890 3300005617 Bacteria 1969
25 Ga0068864_100046639 3300005618 Bacteria 3719
26 Ga0068863_100072007 3300005841 Bacteria 3270
27 Ga0068860_100225868 3300005843 Bacteria 1819
28 Ga0070717_10051285 3300006028 Bacteria 3395
29 Ga0097621_100178295 3300006237 Unclassified 1835
30 Ga0075430_100215581 3300006846 Bacteria 1593
31 Ga0075429_100025271 3300006880 Bacteria 5156
32 Ga0075429_100113379 3300006880 Bacteria 2370
33 Ga0075429_100273081 3300006880 Bacteria 1481
34 Ga0097620_100223888 3300006931 Bacteria 1969
35 Ga0105240_10086879 3300009093 Bacteria 3830
36 Ga0111539_10003596 3300009094 Bacteria 20435
37 Ga0111539_10029078 3300009094 Bacteria 6738
38 Ga0111539_10087753 3300009094 Bacteria 3654
39 Ga0105243_10105997 3300009148 Bacteria 2342
40 Ga0105241_10033873 3300009174 Bacteria 3836
41 Ga0105237_10065823 3300009545 Bacteria 3619
42 Ga0105239_10027191 3300010375 Bacteria 6297
43 Ga0157371_10053449 3300013102 Bacteria 2868
44 Ga0157370_10246807 3300013104 Bacteria 1651
45 Ga0157369_10047174 3300013105 Bacteria 4679
46 Ga0163162_10035280 3300013306 Bacteria 4981
47 Ga0157372_10056076 3300013307 Bacteria 4403
48 Ga0157372_10398545 3300013307 Bacteria 1604
49 Ga0207684_10056398 3300025910 Bacteria 3333
50 Ga0207654_10006250 3300025911 Bacteria 5988
51 Ga0207695_10038976 3300025913 Bacteria 5110
52 Ga0207662_10136802 3300025918 Bacteria 1549
53 Ga0207650_10019294 3300025925 Bacteria 4789
54 Ga0207659_10146358 3300025926 Bacteria 1840
55 Ga0207670_10007406 3300025936 Bacteria 6124
56 Ga0207669_10072141 3300025937 Bacteria 2173
57 Ga0207689_10027436 3300025942 Bacteria 4766
58 Ga0207689_10062930 3300025942 Bacteria 3052
59 Ga0207689_10116052 3300025942 Bacteria 2201
60 Ga0207661_10059389 3300025944 Bacteria 3082
61 Ga0207661_10201271 3300025944 Bacteria 1751
62 Ga0207661_10265842 3300025944 Bacteria 1529
63 Ga0207667_10049692 3300025949 Bacteria 4428
64 Ga0207712_10059086 3300025961 Bacteria 2712
65 Ga0207641_10135174 3300026088 Unclassified 2219
66 Ga0207676_10140776 3300026095 Bacteria 2065
67 Ga0207428_10000931 3300027907 Bacteria 32596
68 Ga0207428_10005800 3300027907 Bacteria 11451
69 Ga0268265_10144089 3300028380 Bacteria 1999
70 Ga0265323_10008904 3300028653 Bacteria 4123
71 Ga0265323_10027272 3300028653 Unclassified 2146
72 Ga0265322_10006490 3300028654 Unclassified 3442
73 Ga0307515_10001075 3300028794 Bacteria 62570
74 Ga0265338_10007787 3300028800 Bacteria 13176
75 Ga0265338_10032053 3300028800 Bacteria 5138
76 Ga0265324_10000080 3300029957 Bacteria 75366
77 Ga0265324_10008597 3300029957 Bacteria 4047
78 Ga0265328_10004210 3300031239 Bacteria 6263
79 Ga0265320_10006393 3300031240 Bacteria 7431
80 Ga0265320_10009550 3300031240 Bacteria 5843
81 Ga0265325_10020182 3300031241 Bacteria 3675
82 Ga0265325_10042197 3300031241 Bacteria 2386
83 Ga0265329_10000057 3300031242 Bacteria 49120
84 Ga0265340_10001363 3300031247 Bacteria 14010
85 Ga0265339_10000094 3300031249 Bacteria 75397
86 Ga0265339_10003364 3300031249 Bacteria 11189
87 Ga0265339_10003776 3300031249 Bacteria 10562
88 Ga0265339_10015901 3300031249 Bacteria 4498
89 Ga0265339_10024969 3300031249 Bacteria 3437
90 Ga0265339_10053303 3300031249 Unclassified 2200
91 Ga0265331_10001667 3300031250 Bacteria 16106
92 Ga0265331_10054542 3300031250 Bacteria 1903
93 Ga0265316_10004241 3300031344 Bacteria 14325
94 Ga0265316_10086118 3300031344 Unclassified 2402
95 Ga0307513_10032239 3300031456 Bacteria 5912
96 Ga0307509_10000042 3300031507 Bacteria 178442
97 Ga0265313_10004600 3300031595 Bacteria 10478
98 Ga0265313_10039384 3300031595 Bacteria 2344
99 Ga0307508_10071620 3300031616 Bacteria 3040
100 Ga0265314_10000017 3300031711 Bacteria 340498
101 Ga0265314_10008866 3300031711 Bacteria 8586
102 Ga0265314_10017953 3300031711 Bacteria 5536
103 Ga0265314_10079390 3300031711 Unclassified 2169
104 Ga0265342_10000229 3300031712 Bacteria 63386
105 Ga0265342_10003660 3300031712 Bacteria 12493
106 Ga0265342_10004276 3300031712 Bacteria 11314
107 Ga0265342_10011342 3300031712 Bacteria 6107
108 Ga0307516_10022668 3300031730 Bacteria 6446
109 Ga0307406_10032979 3300031901 Bacteria 3165
110 Ga0373949_0000334 3300035090 Bacteria 16739
111 Ga0373936_0000003 3300035113 Bacteria 401675
112 Ga0373954_0001495 3300035118 Bacteria 9506
113 Ga0373957_0024611 3300035120 Bacteria 2163
114 Ga0373943_0029265 3300035170 Bacteria 2602
115 Ga0373961_0000258 3300035241 Bacteria 24656
116 Ga0373927_0193379 3300035695 Unclassified 1335
117 Ga0373933_0010445 3300035724 Bacteria 5091
118 Ga0373937_0049915 3300036401 Bacteria 3832
119 Ga0436363_0396323 3300039450 Unclassified 1432
120 Ga0453684_0122940 3300044712 Unclassified 3130
121 Ga0496105_0060082 3300048908 Bacteria 3136
122 Ga0496114_0003147 3300048917 Bacteria 12672
123 Ga0501216_007806 3300049660 Unclassified 1671
124 Ga0501227_003112 3300049665 Bacteria 3605
125 Ga0501233_018421 3300049668 Bacteria 1468
126 nmdc:mga09592_13345_c1 3300050508 Bacteria 4918
127 nmdc:mga09592_137107_c1 3300050508 Bacteria 2108
128 nmdc:mga08y16_34515_c1 3300050511 Bacteria 5313
129 nmdc:mga08y16_4222_c1 3300050511 Bacteria 14988
130 nmdc:mga08y16_9699_c1 3300050511 Bacteria 10109
131 Ga0500566_0002420 3300053094 Bacteria 11060
132 Ga0500566_0003116 3300053094 Bacteria 9914
133 Ga0500640_000982 3300053095 Bacteria 8112
134 Ga0500595_000175 3300053119 Bacteria 42987
135 Ga0500597_004785 3300053120 Bacteria 4262
136 Ga0500597_008055 3300053120 Bacteria 3619
137 Ga0500614_000048 3300053123 Bacteria 26000
138 Ga0500568_0056858 3300053139 Bacteria 1523
139 Ga0500619_004775 3300053154 Bacteria 2947

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300050511 nmdc:mga08y16_4222_c1 nmdc:mga08y16_4222_c1_14058_14969 299
2 3300009093 Ga0105240_10086879 Ga0105240_100868793 324
3 3300009174 Ga0105241_10033873 Ga0105241_100338732 324
4 3300009545 Ga0105237_10065823 Ga0105237_100658233 324
5 3300010375 Ga0105239_10027191 Ga0105239_100271914 324
6 3300013104 Ga0157370_10246807 Ga0157370_102468072 324
7 3300013105 Ga0157369_10047174 Ga0157369_100471742 324
8 3300005467 Ga0070706_100054772 Ga0070706_1000547723 326
9 3300035118 Ga0373954_0001495 Ga0373954_0001495_682_1794 335
10 3300035120 Ga0373957_0024611 Ga0373957_0024611_621_1733 335
11 3300035724 Ga0373933_0010445 Ga0373933_0010445_3838_4950 335
12 3300027907 Ga0207428_10005800 Ga0207428_100058009 351
13 3300049660 Ga0501216_007806 Ga0501216_007806_351_1514 358
14 3300049665 Ga0501227_003112 Ga0501227_003112_233_1396 358
15 3300049668 Ga0501233_018421 Ga0501233_018421_210_1373 358
16 3300005617 Ga0068859_100223890 Ga0068859_1002238903 359
17 3300006931 Ga0097620_100223888 Ga0097620_1002238883 359
18 3300025936 Ga0207670_10007406 Ga0207670_100074062 359
19 3300025961 Ga0207712_10059086 Ga0207712_100590862 360
20 3300005331 Ga0070670_100094942 Ga0070670_1000949422 361
21 3300025925 Ga0207650_10019294 Ga0207650_100192943 361
22 3300035170 Ga0373943_0029265 Ga0373943_0029265_1307_2530 361
23 3300035695 Ga0373927_0193379 Ga0373927_0193379_51_1274 361
24 3300048908 Ga0496105_0060082 Ga0496105_0060082_10_1266 362
25 3300048917 Ga0496114_0003147 Ga0496114_0003147_6005_7264 362
26 3300005334 Ga0068869_100172796 Ga0068869_1001727962 363
27 3300025910 Ga0207684_10056398 Ga0207684_100563983 363
28 3300025942 Ga0207689_10116052 Ga0207689_101160522 363
29 3300028800 Ga0265338_10007787 Ga0265338_1000778713 363
30 3300031239 Ga0265328_10004210 Ga0265328_100042102 363
31 3300031240 Ga0265320_10006393 Ga0265320_100063934 363
32 3300031249 Ga0265339_10003776 Ga0265339_100037764 363
33 3300031711 Ga0265314_10008866 Ga0265314_100088663 363
34 3300031712 Ga0265342_10011342 Ga0265342_100113422 363
35 3300028380 Ga0268265_10144089 Ga0268265_101440892 365
36 3300005334 Ga0068869_100090056 Ga0068869_1000900562 366
37 3300005456 Ga0070678_100008153 Ga0070678_1000081534 366
38 3300025937 Ga0207669_10072141 Ga0207669_100721412 366
39 3300025942 Ga0207689_10062930 Ga0207689_100629302 366
40 3300025944 Ga0207661_10059389 Ga0207661_100593893 366
41 3300039450 Ga0436363_0396323 Ga0436363_0396323_22_1137 366
42 3300005471 Ga0070698_100001106 Ga0070698_10000110624 367
43 3300005471 Ga0070698_100216335 Ga0070698_1002163351 367
44 3300009094 Ga0111539_10029078 Ga0111539_100290787 367
45 3300050511 nmdc:mga08y16_34515_c1 nmdc:mga08y16_34515_c1_1042_2202 367
46 3300005614 Ga0068856_100161967 Ga0068856_1001619672 368
47 3300006880 Ga0075429_100113379 Ga0075429_1001133792 368
48 3300006880 Ga0075429_100273081 Ga0075429_1002730811 368
49 3300028794 Ga0307515_10001075 Ga0307515_100010755 368
50 3300050508 nmdc:mga09592_13345_c1 nmdc:mga09592_13345_c1_899_2020 368
51 3300029957 Ga0265324_10000080 Ga0265324_100000802 371
52 3300029957 Ga0265324_10008597 Ga0265324_100085973 371
53 3300031240 Ga0265320_10009550 Ga0265320_100095502 371
54 3300031241 Ga0265325_10042197 Ga0265325_100421972 371
55 3300031249 Ga0265339_10000094 Ga0265339_100000942 371
56 3300031249 Ga0265339_10003364 Ga0265339_100033644 371
57 3300031249 Ga0265339_10024969 Ga0265339_100249693 371
58 3300031595 Ga0265313_10004600 Ga0265313_100046005 371
59 3300031711 Ga0265314_10017953 Ga0265314_100179533 371
60 3300031712 Ga0265342_10000229 Ga0265342_1000022938 371
61 3300005335 Ga0070666_10061477 Ga0070666_100614772 372
62 3300005466 Ga0070685_10080394 Ga0070685_100803942 372
63 3300005544 Ga0070686_100028798 Ga0070686_1000287982 372
64 3300005614 Ga0068856_100063688 Ga0068856_1000636882 372
65 3300005841 Ga0068863_100072007 Ga0068863_1000720072 372
66 3300009094 Ga0111539_10003596 Ga0111539_1000359611 372
67 3300027907 Ga0207428_10000931 Ga0207428_100009318 372
68 3300036401 Ga0373937_0049915 Ga0373937_0049915_957_2129 372
69 3300026088 Ga0207641_10135174 Ga0207641_101351742 373
70 3300028653 Ga0265323_10008904 Ga0265323_100089042 373
71 3300028653 Ga0265323_10027272 Ga0265323_100272721 373
72 3300028654 Ga0265322_10006490 Ga0265322_100064903 373
73 3300028800 Ga0265338_10032053 Ga0265338_100320532 373
74 3300031241 Ga0265325_10020182 Ga0265325_100201822 373
75 3300031242 Ga0265329_10000057 Ga0265329_1000005740 373
76 3300031247 Ga0265340_10001363 Ga0265340_1000136314 373
77 3300031249 Ga0265339_10015901 Ga0265339_100159013 373
78 3300031249 Ga0265339_10053303 Ga0265339_100533032 373
79 3300031250 Ga0265331_10001667 Ga0265331_100016678 373
80 3300031250 Ga0265331_10054542 Ga0265331_100545421 373
81 3300031344 Ga0265316_10004241 Ga0265316_100042412 373
82 3300031344 Ga0265316_10086118 Ga0265316_100861182 373
83 3300031507 Ga0307509_10000042 Ga0307509_1000004224 373
84 3300031595 Ga0265313_10039384 Ga0265313_100393842 373
85 3300031711 Ga0265314_10000017 Ga0265314_1000001768 373
86 3300031711 Ga0265314_10079390 Ga0265314_100793901 373
87 3300031712 Ga0265342_10003660 Ga0265342_100036605 373
88 3300031712 Ga0265342_10004276 Ga0265342_1000427611 373
89 3300044712 Ga0453684_0122940 Ga0453684_0122940_124_1338 373
90 3300005330 Ga0070690_100007313 Ga0070690_1000073135 374
91 3300005365 Ga0070688_100038257 Ga0070688_1000382573 374
92 3300005438 Ga0070701_10020443 Ga0070701_100204432 374
93 3300005614 Ga0068856_100195817 Ga0068856_1001958173 374
94 3300025918 Ga0207662_10136802 Ga0207662_101368021 374
95 3300025942 Ga0207689_10027436 Ga0207689_100274365 374
96 3300025944 Ga0207661_10265842 Ga0207661_102658422 374
97 3300031616 Ga0307508_10071620 Ga0307508_100716202 374
98 3300031730 Ga0307516_10022668 Ga0307516_100226685 374
99 3300035090 Ga0373949_0000334 Ga0373949_0000334_2081_3391 374
100 3300035113 Ga0373936_0000003 Ga0373936_0000003_100480_101709 374
101 3300035241 Ga0373961_0000258 Ga0373961_0000258_4991_6253 374
102 3300053094 Ga0500566_0002420 Ga0500566_0002420_5857_7029 374
103 3300053094 Ga0500566_0003116 Ga0500566_0003116_7634_8833 374
104 3300053095 Ga0500640_000982 Ga0500640_000982_3638_4810 374
105 3300053119 Ga0500595_000175 Ga0500595_000175_8294_9466 374
106 3300053120 Ga0500597_008055 Ga0500597_008055_1504_2676 374
107 3300053123 Ga0500614_000048 Ga0500614_000048_9451_10623 374
108 3300053154 Ga0500619_004775 Ga0500619_004775_1244_2416 374
109 3300006237 Ga0097621_100178295 Ga0097621_1001782952 375
110 3300009094 Ga0111539_10087753 Ga0111539_100877532 375
111 3300013307 Ga0157372_10398545 Ga0157372_103985451 375
112 3300025926 Ga0207659_10146358 Ga0207659_101463582 375
113 3300050511 nmdc:mga08y16_9699_c1 nmdc:mga08y16_9699_c1_8050_9285 375
114 3300053139 Ga0500568_0056858 Ga0500568_0056858_127_1401 375
115 3300005441 Ga0070700_100090457 Ga0070700_1000904572 376
116 3300005616 Ga0068852_100156262 Ga0068852_1001562622 376
117 3300006028 Ga0070717_10051285 Ga0070717_100512852 376
118 3300006846 Ga0075430_100215581 Ga0075430_1002155812 376
119 3300006880 Ga0075429_100025271 Ga0075429_1000252715 376
120 3300009148 Ga0105243_10105997 Ga0105243_101059972 376
121 3300031456 Ga0307513_10032239 Ga0307513_100322392 376
122 3300050508 nmdc:mga09592_137107_c1 nmdc:mga09592_137107_c1_664_1962 376
123 3300053120 Ga0500597_004785 Ga0500597_004785_1247_2521 376
124 3300031901 Ga0307406_10032979 Ga0307406_100329792 377
125 3300005329 Ga0070683_100210872 Ga0070683_1002108721 380
126 3300005337 Ga0070682_100023999 Ga0070682_1000239992 380
127 3300005458 Ga0070681_10022238 Ga0070681_100222383 380
128 3300005530 Ga0070679_100073055 Ga0070679_1000730552 380
129 3300005563 Ga0068855_100265098 Ga0068855_1002650982 380
130 3300005618 Ga0068864_100046639 Ga0068864_1000466393 380
131 3300005843 Ga0068860_100225868 Ga0068860_1002258681 380
132 3300013102 Ga0157371_10053449 Ga0157371_100534493 380
133 3300013306 Ga0163162_10035280 Ga0163162_100352802 380
134 3300013307 Ga0157372_10056076 Ga0157372_100560762 380
135 3300025911 Ga0207654_10006250 Ga0207654_100062503 380
136 3300025913 Ga0207695_10038976 Ga0207695_100389763 380
137 3300025944 Ga0207661_10201271 Ga0207661_102012712 380
138 3300025949 Ga0207667_10049692 Ga0207667_100496923 380
139 3300026095 Ga0207676_10140776 Ga0207676_101407761 380

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01494

FAD_binding_3

FAD binding domain

59

103

0.93

PF00890

FAD_binding_2

FAD binding domain

61

138

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
8a3x-assembly1.cif.gz_B imine reductase from ensifer adhaerens in complex with nadp+ 0.9607 6 35
3l6d-assembly1.cif.gz_A crystal structure of putative oxidoreductase from pseudomonas putida kt2440 0.9568 5 36
1zx9-assembly1.cif.gz_A crystal structure of tn501 mera 0.953 5 36
5a9r-assembly1.cif.gz_A apo form of imine reductase from amycolatopsis orientalis 0.9503 6 37
4e21-assembly1.cif.gz_A-2 the crystal structure of 6-phosphogluconate dehydrogenase from geobacter metallireducens 0.9502 6 36
ID Description Score Start End Superfamily
af_Q4DU92_1_145_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9623 6 35 3.40.50.720
1orrD00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9566 6 35 3.40.50.720
af_Q4D0X5_1_185_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9529 6 35 3.40.50.720
af_O61709_2_252_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9515 7 35 3.40.50.720
af_P45522_400_562_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9475 4 36 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3P1CJJ2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9551 1 378
AF-A0A3P1CJJ2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9526 1 378
AF-A0A2V7TVG2-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9368 4 150
AF-A0A7V9L8P3-F1-model_v4 FAD-dependent oxidoreductase 0.9296 1 376 GO:0016491
AF-A0A7J5ESX9-F1-model_v4 FAD-binding protein 0.9284 3 154 GO:0016491

Feature Viewer

pLDDT pTM Quality
88.35 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map