F174616

General Info

Members Datasets Scaffolds Average Seq Length
138 117 97 451

Family's Representative Sequence

Representative Sequence 3300053083|Ga0495655_0005163|Ga0495655_0005163_441_1931
Length 496
Sequence VLRLGPKHPAQVIVLGFVGAIVAGTGVLMLPMAKQGEGGAGFLEALFTATSSVCVTGLIVVDTPTFWTPFGQAVIMVLIQLGGFGVMSFGALLGVLLAGRLGLKSRISAAAETKSAGFGDVRTVLLGVLRFSLLTEAALASILMLRFIIGYGYSPGRALWEGVFHAVSSFNNAGFALYSDNLMGFAGDPWVCLPIAAAVIIGYGYSPGRALWEGVFHAVSSFNNAGFALYSDNLMGFAGDPWVCLPIAAAVIIGGMGFPVLMELSRRYRRPIHWSMNTKLVLSGTAVLLVLGTVFITAVEWGNRATLGSLPPGERILAGFFQSVISRTAGFNSVDIAELHPVTWMGMDILMFIGGGPAGTAGGLKITTFAVLFFILYAEIRGGTAVNIFGKRLSGSVHREAITVVLLAIALVVVATMALMFLTRFGQEQLLFEVVSAFGTVGLSTGITAALPPAGQVILIALMFIGRLGPVTLASALALRQRPILYEYPEERPLIG

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
3 2643221597 Microbacterium sp. Root180 Isolate Unclassified
4 2643221649 Leifsonia sp. Root4 Isolate Unclassified
5 2687453737 Frankia sp. BMG5.36 Isolate Nodule
6 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
7 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
8 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
9 2739367653 Kocuria sp. OV113 Isolate Unclassified
10 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
11 2773857922 Frankia sp. CcI49 Isolate Nodule
12 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
13 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
14 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
15 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
16 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
17 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
18 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
19 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
20 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
21 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
22 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
23 2857727296 Kocuria sp. R-72562 Isolate Unclassified
24 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
25 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified
26 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
27 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
28 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
29 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
30 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
31 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
32 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
33 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
34 2920879853 Kocuria salina CV6 Isolate Unclassified
35 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
36 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
37 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
38 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
39 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
75 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
76 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
77 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
78 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
79 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
111 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
115 8002775197 Frankia nepalensis CN7 Isolate Nodule
116 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
117 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 70.29
Metatranscriptomes 0
Isolates 29.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.17
Nodule 3.62
Rhizoplane 2.17
Rhizosphere 66.67
Stem 0
Stem Tuber 0
Unclassified 25.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10155227 3300003322 Bacteria 5015
2 Ga0081455_10000265 3300005937 Bacteria 68995
3 Ga0081455_10003224 3300005937 Bacteria 18896
4 Ga0081455_10079250 3300005937 Bacteria 2697
5 Ga0081538_10053581 3300005981 Bacteria 2396
6 Ga0075364_10020976 3300006051 Bacteria 4115
7 Ga0075428_100007503 3300006844 Bacteria 12086
8 Ga0075430_100023792 3300006846 Bacteria 5216
9 Ga0075431_100006660 3300006847 Bacteria 11474
10 Ga0075431_100008659 3300006847 Bacteria 10194
11 Ga0075434_100113821 3300006871 Bacteria 2718
12 Ga0075429_100018048 3300006880 Bacteria 6103
13 Ga0111539_10193310 3300009094 Bacteria 2374
14 Ga0114129_10008101 3300009147 Bacteria 14976
15 Ga0157375_10152332 3300013308 Bacteria 2448
16 Ga0157380_10014461 3300014326 Bacteria 5774
17 Ga0307408_100067322 3300031548 Bacteria 2633
18 Ga0316579_10008201 3300031691 Bacteria 4346
19 Ga0316576_10068976 3300031727 Bacteria 2606
20 Ga0316578_10052783 3300031728 Bacteria 2383
21 Ga0307405_10004223 3300031731 Bacteria 6758
22 Ga0307405_10012515 3300031731 Bacteria 4496
23 Ga0307405_10020631 3300031731 Bacteria 3685
24 Ga0307413_10024507 3300031824 Bacteria 3291
25 Ga0307410_10000912 3300031852 Bacteria 12597
26 Ga0307410_10023968 3300031852 Bacteria 3806
27 Ga0307406_10009527 3300031901 Bacteria 5452
28 Ga0307406_10078810 3300031901 Bacteria 2183
29 Ga0307412_10015135 3300031911 Bacteria 4565
30 Ga0307412_10022973 3300031911 Bacteria 3831
31 Ga0307409_100003469 3300031995 Bacteria 8568
32 Ga0307409_100011657 3300031995 Bacteria 5556
33 Ga0307416_100010166 3300032002 Bacteria 6203
34 Ga0307416_100031610 3300032002 Bacteria 3987
35 Ga0307416_100036706 3300032002 Bacteria 3762
36 Ga0307416_100090037 3300032002 Bacteria 2629
37 Ga0307414_10076892 3300032004 Bacteria 2427
38 Ga0307415_100000027 3300032126 Bacteria 61974
39 Ga0307415_100008845 3300032126 Bacteria 5607
40 Ga0307415_100027701 3300032126 Bacteria 3594
41 Ga0316582_0029758 3300036647 Bacteria 3320
42 Ga0316584_0059599 3300036712 Bacteria 2858
43 Ga0316584_0087495 3300036712 Bacteria 2332
44 Ga0395900_0068991 3300037418 Bacteria 3633
45 Ga0395898_0058482 3300037466 Bacteria 3752
46 Ga0451843_0992379 3300041509 Bacteria 2279
47 Ga0453684_0000291 3300044712 Bacteria 215046
48 Ga0496102_0147400 3300048905 Bacteria 2209
49 Ga0496104_0190559 3300048907 Bacteria 1962
50 Ga0496113_0224296 3300048916 Bacteria 1498
51 Ga0496117_0009274 3300048920 Bacteria 9196
52 Ga0496118_0007391 3300048921 Bacteria 11664
53 Ga0496119_0081991 3300048922 Bacteria 1855
54 Ga0496122_0000948 3300048925 Bacteria 52491
55 Ga0496122_0061775 3300048925 Bacteria 2747
56 Ga0496123_0000169 3300048926 Bacteria 130983
57 Ga0496123_0002524 3300048926 Bacteria 22461
58 Ga0496124_0001959 3300048927 Bacteria 28130
59 Ga0496125_0002536 3300048928 Bacteria 23540
60 Ga0496125_0018121 3300048928 Bacteria 6692
61 Ga0496126_0025589 3300048929 Bacteria 5673
62 Ga0496126_0063762 3300048929 Bacteria 3303
63 Ga0501031_0000895 3300049568 Bacteria 17981
64 Ga0501032_0121578 3300049569 Bacteria 1726
65 Ga0501036_0000333 3300049572 Bacteria 33028
66 Ga0501038_0001821 3300049574 Bacteria 19748
67 Ga0501039_0000617 3300049575 Bacteria 25724
68 Ga0501040_0000098 3300049576 Bacteria 43927
69 Ga0501041_0000145 3300049577 Bacteria 31208
70 Ga0501042_0000144 3300049578 Bacteria 31606
71 Ga0501043_0003867 3300049579 Bacteria 12304
72 Ga0501046_0000886 3300049580 Bacteria 29142
73 Ga0501048_0001053 3300049582 Bacteria 20668
74 Ga0501068_0017352 3300049584 Bacteria 4163
75 Ga0501071_0000340 3300049587 Bacteria 22663
76 Ga0501072_0000179 3300049588 Bacteria 45653
77 Ga0501074_0013824 3300049590 Bacteria 5870
78 Ga0501075_0000243 3300049591 Bacteria 29207
79 Ga0501076_0000238 3300049592 Bacteria 33689
80 Ga0501077_0000460 3300049593 Bacteria 24731
81 Ga0501079_0000103 3300049741 Bacteria 43079
82 Ga0501080_0013692 3300049742 Bacteria 7469
83 Ga0501081_0000438 3300049743 Bacteria 23048
84 Ga0501083_0014641 3300049744 Bacteria 5483
85 Ga0501045_0000109 3300049824 Bacteria 41385
86 nmdc:mga00v17_17399_c1 3300050491 Bacteria 4069
87 nmdc:mga05p37_33082_c1 3300050507 Bacteria 6332
88 nmdc:mga05p37_4618_c1 3300050507 Bacteria 16099
89 nmdc:mga09592_1048_c1 3300050508 Bacteria 21917
90 nmdc:mga0qj67_4140_c1 3300050509 Bacteria 10511
91 nmdc:mga06r32_1688_c1 3300050510 Bacteria 19892
92 nmdc:mga06r32_5235_c1 3300050510 Bacteria 11663
93 Ga0495655_0005163 3300053083 Bacteria 2289
94 Ga0500616_0000221 3300053153 Bacteria 88983
95 Ga0501084_0000383 3300054114 Bacteria 33962
96 Ga0501082_0000047 3300060353 Bacteria 86072
97 Ga0530510_0000144 3300061734 Bacteria 41986

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049569 Ga0501032_0121578 Ga0501032_0121578_514_1710 382
2 3300031691 Ga0316579_10008201 Ga0316579_100082013 401
3 3300031727 Ga0316576_10068976 Ga0316576_100689762 401
4 3300036647 Ga0316582_0029758 Ga0316582_0029758_1464_2822 401
5 3300036712 Ga0316584_0059599 Ga0316584_0059599_333_1691 401
6 3300031901 Ga0307406_10009527 Ga0307406_100095273 403
7 3300032002 Ga0307416_100036706 Ga0307416_1000367062 403
8 3300032004 Ga0307414_10076892 Ga0307414_100768921 403
9 3300009147 Ga0114129_10008101 Ga0114129_1000810111 414
10 3300031731 Ga0307405_10004223 Ga0307405_100042236 414
11 3300031824 Ga0307413_10024507 Ga0307413_100245074 414
12 3300031852 Ga0307410_10023968 Ga0307410_100239682 414
13 3300031911 Ga0307412_10022973 Ga0307412_100229734 414
14 3300031995 Ga0307409_100011657 Ga0307409_1000116575 414
15 3300032002 Ga0307416_100010166 Ga0307416_1000101663 414
16 3300032126 Ga0307415_100000027 Ga0307415_1000000279 414
17 3300050507 nmdc:mga05p37_33082_c1 nmdc:mga05p37_33082_c1_4147_5481 414
18 3300031995 Ga0307409_100003469 Ga0307409_1000034693 417
19 iso_pu_bacteria 2643221597 2643994922 419
20 3300013308 Ga0157375_10152332 Ga0157375_101523323 424
21 3300053153 Ga0500616_0000221 Ga0500616_0000221_81706_83067 425
22 3300005937 Ga0081455_10003224 Ga0081455_100032246 427
23 iso_pu_bacteria 2728369380 2730228265 429
24 iso_pu_bacteria 2747842429 2747953403 429
25 iso_pu_bacteria 2808606306 2808628993 430
26 3300006847 Ga0075431_100008659 Ga0075431_10000865910 431
27 3300041509 Ga0451843_0992379 Ga0451843_0992379_568_1866 431
28 3300048920 Ga0496117_0009274 Ga0496117_0009274_121_1416 431
29 3300048921 Ga0496118_0007391 Ga0496118_0007391_7014_8309 431
30 3300048922 Ga0496119_0081991 Ga0496119_0081991_33_1328 431
31 3300050510 nmdc:mga06r32_5235_c1 nmdc:mga06r32_5235_c1_5967_7292 431
32 3300031728 Ga0316578_10052783 Ga0316578_100527831 433
33 3300036712 Ga0316584_0087495 Ga0316584_0087495_446_1747 433
34 3300048907 Ga0496104_0190559 Ga0496104_0190559_445_1875 433
35 3300048916 Ga0496113_0224296 Ga0496113_0224296_170_1471 433
36 iso_pu_bacteria 2920879853 2920882938 437
37 iso_pu_bacteria 2508501039 2508673713 439
38 iso_pu_bacteria 2852643534 2852643862 440
39 3300005981 Ga0081538_10053581 Ga0081538_100535812 441
40 3300032002 Ga0307416_100090037 Ga0307416_1000900372 441
41 3300032126 Ga0307415_100008845 Ga0307415_1000088453 441
42 3300044712 Ga0453684_0000291 Ga0453684_0000291_23550_24896 441
43 3300005937 Ga0081455_10000265 Ga0081455_1000026557 442
44 3300005937 Ga0081455_10079250 Ga0081455_100792503 442
45 3300006844 Ga0075428_100007503 Ga0075428_1000075033 442
46 3300006846 Ga0075430_100023792 Ga0075430_1000237924 442
47 3300006847 Ga0075431_100006660 Ga0075431_1000066604 442
48 3300006871 Ga0075434_100113821 Ga0075434_1001138213 442
49 3300006880 Ga0075429_100018048 Ga0075429_1000180483 442
50 3300009094 Ga0111539_10193310 Ga0111539_101933102 442
51 3300050507 nmdc:mga05p37_4618_c1 nmdc:mga05p37_4618_c1_11994_13322 442
52 3300050508 nmdc:mga09592_1048_c1 nmdc:mga09592_1048_c1_15152_16480 442
53 3300050509 nmdc:mga0qj67_4140_c1 nmdc:mga0qj67_4140_c1_1181_2509 442
54 3300050510 nmdc:mga06r32_1688_c1 nmdc:mga06r32_1688_c1_4350_5678 442
55 3300048925 Ga0496122_0000948 Ga0496122_0000948_3609_4991 444
56 3300048926 Ga0496123_0000169 Ga0496123_0000169_103175_104557 444
57 3300048927 Ga0496124_0001959 Ga0496124_0001959_13186_14568 444
58 3300048928 Ga0496125_0018121 Ga0496125_0018121_271_1653 444
59 3300048929 Ga0496126_0025589 Ga0496126_0025589_1706_3088 444
60 3300048929 Ga0496126_0063762 Ga0496126_0063762_411_1748 444
61 3300053083 Ga0495655_0005163 Ga0495655_0005163_441_1931 444
62 iso_pu_bacteria 2852646457 2852648101 444
63 iso_pu_bacteria 2887443736 2887445105 444
64 iso_pu_bacteria 2945968032 2945970155 444
65 iso_pu_bacteria 2687453737 2689964477 445
66 iso_pu_bacteria 2904765812 2904768980 445
67 iso_pu_bacteria 2904770941 2904771741 445
68 iso_pu_bacteria 2908811453 2908811768 445
69 iso_pu_bacteria 2919420072 2919420095 445
70 iso_pu_bacteria 2919432681 2919434146 445
71 3300048905 Ga0496102_0147400 Ga0496102_0147400_493_1953 446
72 iso_pu_bacteria 2687453743 2689995093 446
73 3300031852 Ga0307410_10000912 Ga0307410_1000091220 447
74 iso_pu_bacteria 2839986021 2839987293 448
75 iso_pu_bacteria 2857479173 2857481083 448
76 iso_pu_bacteria 2857632687 2857634598 448
77 iso_pu_bacteria 2870804320 2870806531 448
78 3300006051 Ga0075364_10020976 Ga0075364_100209764 449
79 3300037418 Ga0395900_0068991 Ga0395900_0068991_268_1659 449
80 3300037466 Ga0395898_0058482 Ga0395898_0058482_1125_2516 449
81 3300048925 Ga0496122_0061775 Ga0496122_0061775_721_2070 449
82 3300048926 Ga0496123_0002524 Ga0496123_0002524_21059_22408 449
83 3300048928 Ga0496125_0002536 Ga0496125_0002536_2444_3823 449
84 3300050491 nmdc:mga00v17_17399_c1 nmdc:mga00v17_17399_c1_250_1626 449
85 iso_pu_bacteria 2773857922 2774857905 449
86 iso_pu_bacteria 2811994872 2812324161 449
87 iso_pu_bacteria 2811994880 2812362354 449
88 iso_pu_bacteria 2899359706 2899361127 449
89 iso_pu_bacteria 2964326757 2964328366 449
90 iso_pu_bacteria 8056060235 8056061365 449
91 3300049568 Ga0501031_0000895 Ga0501031_0000895_12795_14222 450
92 3300049572 Ga0501036_0000333 Ga0501036_0000333_22794_24221 450
93 3300049574 Ga0501038_0001821 Ga0501038_0001821_1097_2524 450
94 3300049575 Ga0501039_0000617 Ga0501039_0000617_10776_12203 450
95 3300049576 Ga0501040_0000098 Ga0501040_0000098_27144_28571 450
96 3300049577 Ga0501041_0000145 Ga0501041_0000145_10694_12121 450
97 3300049578 Ga0501042_0000144 Ga0501042_0000144_9265_10692 450
98 3300049579 Ga0501043_0003867 Ga0501043_0003867_8434_9861 450
99 3300049580 Ga0501046_0000886 Ga0501046_0000886_12345_13772 450
100 3300049582 Ga0501048_0001053 Ga0501048_0001053_4067_5494 450
101 3300049584 Ga0501068_0017352 Ga0501068_0017352_1502_2929 450
102 3300049587 Ga0501071_0000340 Ga0501071_0000340_3698_5125 450
103 3300049588 Ga0501072_0000179 Ga0501072_0000179_11965_13392 450
104 3300049590 Ga0501074_0013824 Ga0501074_0013824_3512_4939 450
105 3300049591 Ga0501075_0000243 Ga0501075_0000243_11398_12825 450
106 3300049592 Ga0501076_0000238 Ga0501076_0000238_11011_12438 450
107 3300049593 Ga0501077_0000460 Ga0501077_0000460_11025_12452 450
108 3300049741 Ga0501079_0000103 Ga0501079_0000103_20925_22352 450
109 3300049742 Ga0501080_0013692 Ga0501080_0013692_736_2163 450
110 3300049743 Ga0501081_0000438 Ga0501081_0000438_13780_15207 450
111 3300049744 Ga0501083_0014641 Ga0501083_0014641_1422_2849 450
112 3300049824 Ga0501045_0000109 Ga0501045_0000109_19035_20462 450
113 3300054114 Ga0501084_0000383 Ga0501084_0000383_18889_20316 450
114 3300060353 Ga0501082_0000047 Ga0501082_0000047_42888_44315 450
115 3300061734 Ga0530510_0000144 Ga0530510_0000144_20155_21582 450
116 iso_pu_bacteria 2857729791 2857731368 453
117 3300031548 Ga0307408_100067322 Ga0307408_1000673221 455
118 3300031901 Ga0307406_10078810 Ga0307406_100788101 455
119 3300032126 Ga0307415_100027701 Ga0307415_1000277014 455
120 iso_pu_bacteria 2945916053 2945917739 455
121 3300031731 Ga0307405_10012515 Ga0307405_100125154 456
122 3300031911 Ga0307412_10015135 Ga0307412_100151353 456
123 iso_pu_bacteria 2643221649 2644279292 456
124 iso_pu_bacteria 2690315906 2691515114 456
125 iso_pu_bacteria 2739367653 2739604295 456
126 iso_pu_bacteria 2808606357 2808828270 456
127 iso_pu_bacteria 2808606360 2808849512 456
128 iso_pu_bacteria 2816332305 2817509422 456
129 iso_pu_bacteria 2857727296 2857728752 456
130 iso_pu_bacteria 2919391150 2919393046 456
131 iso_pu_bacteria 2945956166 2945960282 456
132 iso_pu_bacteria 8002775197 8002782867 457
133 3300003322 rootL2_10155227 rootL2_101552273 458
134 3300014326 Ga0157380_10014461 Ga0157380_100144612 458
135 3300031731 Ga0307405_10020631 Ga0307405_100206311 458
136 3300032002 Ga0307416_100031610 Ga0307416_1000316103 458
137 iso_pu_bacteria 2537561592 2537898621 458
138 iso_pu_bacteria 8054107350 8054111478 458

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02386

TrkH

Cation transport protein

204

483

0.9

PF02386

TrkH

Cation transport protein

7

206

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7zp9-assembly1.cif.gz_I ktrab complex - ktra8 ring with a ktrb dimer on each side 0.9129 23 458
7zp9-assembly1.cif.gz_M ktrab complex - ktra8 ring with a ktrb dimer on each side 0.9121 23 458
7zpo-assembly1.cif.gz_M native ktrab complex 0.9078 24 458
7zp9-assembly1.cif.gz_I ktrab complex - ktra8 ring with a ktrb dimer on each side 0.8846 23 458
7zp9-assembly1.cif.gz_M ktrab complex - ktra8 ring with a ktrb dimer on each side 0.8835 23 458
ID Description Score Start End Superfamily
af_A0A0R0LDQ5_171_399_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.8145 135 321 1.10.287.70
3t4zB00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7817 24 96 1.10.287.70
4pdlA00 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7782 24 96 1.10.287.70
af_K7L1F4_58_384_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7722 58 321 1.10.287.70
af_A0A1D6GV20_178_549_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.7306 124 429 1.10.287.70
ID Description Score Start End GO Terms
AF-X1IE76-F1-model_v4 Uncharacterized protein 0.9863 271 408 GO:0005886
GO:0008324
GO:0030001
AF-A0A2N0BKC0-F1-model_v4 deleted 0.981 243 430
AF-X1QXP4-F1-model_v4 Uncharacterized protein 0.9756 206 391 GO:0005886
GO:0008324
GO:0030001
AF-A0A3D2SLE5-F1-model_v4 Potassium transporter TrkH 0.9749 135 431 GO:0005886
GO:0008324
GO:0030001
AF-A0A3D2HZG6-F1-model_v4 Potassium uptake protein, TrkH family 0.9715 216 387 GO:0005886
GO:0008324
GO:0030001

Feature Viewer

pLDDT pTM Quality
85.35 0.85 High
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Predicted Structure (AlphaFold2)

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