F174403

General Info

Members Datasets Scaffolds Average Seq Length
138 119 125 398

Family's Representative Sequence

Representative Sequence 3300049571|Ga0501034_0002306|Ga0501034_0002306_5873_7171
Length 432
Sequence MCPGIGAHELFPLLGGIGGNYVRVSGREANGPVRLSSVAARRVALAAQGFGRERPFPRVTMRQVQATIDRIGLLQIDSVNVLARAHLLPLYSRLGPYDIGLLEKASSKRPRRLVEYWAHEASFVPPETHRLLRWRMERADRDAWRTVRAAAEQPELLDDVIAEIARRGPMTAGQVGAAIDPDHVPDKKNWGWNWPPVKSALEYLFWSGRISSAGRTSQFERLYDLPERVLPGQGHQTEAPLQEEAIKGLVEISARAHGVGTARCLRDYFRLPARESKQAIEELAAEGRLIEAEVEGFSAPAWIHPEARRPRKVDARALLAPFDPLIFERRRLEELFGFHYRIEIYTPKDKRRYGYYVLPFLIDEQLAGRVDLKSDREGSVLLVQSAWVEPDAPAGTAAELADELRLMAGWLGLEEVTVRPKGDLAADLKAAL

Samples

Sample ID Description Type Environment
1 2643221613 Oerskovia sp. Root22 Isolate Unclassified
2 2643221721 Oerskovia sp. Root918 Isolate Unclassified
3 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
4 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
5 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
6 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
7 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
8 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
9 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
10 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
11 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
12 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
13 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
14 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
15 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
25 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
37 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
57 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
58 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
66 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
67 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
68 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
69 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
82 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
85 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
86 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
96 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
115 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
118 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.58
Metatranscriptomes 0
Isolates 9.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.7
Nodule 0
Rhizoplane 9.42
Rhizosphere 73.91
Stem 0
Stem Tuber 0
Unclassified 7.97

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000116 3300002773 Bacteria 55384
2 Ga0070690_100040034 3300005330 Bacteria 2963
3 Ga0070689_100071880 3300005340 Bacteria 2703
4 Ga0068856_100030087 3300005614 Bacteria 5308
5 Ga0068866_10027655 3300005718 Bacteria 2693
6 Ga0068861_100105054 3300005719 Bacteria 2254
7 Ga0081455_10001272 3300005937 Bacteria 31484
8 Ga0081455_10145146 3300005937 Bacteria 1837
9 Ga0081540_1013947 3300005983 Bacteria 5188
10 Ga0081539_10033944 3300005985 Bacteria 3097
11 Ga0075365_10082959 3300006038 Bacteria 2174
12 Ga0075432_10003628 3300006058 Bacteria 5249
13 Ga0097621_100049470 3300006237 Bacteria 3415
14 Ga0068871_100026532 3300006358 Bacteria 4522
15 Ga0068865_100091065 3300006881 Bacteria 2212
16 Ga0105243_10023219 3300009148 Bacteria 4721
17 Ga0105242_10006052 3300009176 Bacteria 9324
18 Ga0105248_10190452 3300009177 Bacteria 2311
19 Ga0105249_10039904 3300009553 Bacteria 4262
20 Ga0105239_10304889 3300010375 Bacteria 1794
21 Ga0157378_10033151 3300013297 Bacteria 4565
22 Ga0163162_10129321 3300013306 Bacteria 2633
23 Ga0213876_10058100 3300021384 Bacteria 2042
24 Ga0209129_1000028 3300025258 Bacteria 405451
25 Ga0209025_1000655 3300025294 Bacteria 60278
26 Ga0207642_10022162 3300025899 Bacteria 2514
27 Ga0207671_10068334 3300025914 Bacteria 2647
28 Ga0207662_10167632 3300025918 Bacteria 1407
29 Ga0207709_10009180 3300025935 Bacteria 5448
30 Ga0207670_10018982 3300025936 Bacteria 4191
31 Ga0207669_10041957 3300025937 Bacteria 2667
32 Ga0207667_10006887 3300025949 Bacteria 13734
33 Ga0207712_10015988 3300025961 Bacteria 4850
34 Ga0207678_10157631 3300026067 Bacteria 1938
35 Ga0207702_10057601 3300026078 Bacteria 3303
36 Ga0207648_10003477 3300026089 Bacteria 16513
37 Ga0207675_100013032 3300026118 Bacteria 7762
38 Ga0207675_100047609 3300026118 Bacteria 4002
39 Ga0307408_100003227 3300031548 Bacteria 11215
40 Ga0316576_10013120 3300031727 Bacteria 5496
41 Ga0307405_10011274 3300031731 Bacteria 4675
42 Ga0307410_10005718 3300031852 Bacteria 6623
43 Ga0307409_100002762 3300031995 Bacteria 9278
44 Ga0307409_100010194 3300031995 Bacteria 5825
45 Ga0307416_100014323 3300032002 Bacteria 5429
46 Ga0307416_100016200 3300032002 Bacteria 5172
47 Ga0307415_100049239 3300032126 Bacteria 2848
48 Ga0316583_10003002 3300032133 Bacteria 5932
49 Ga0316585_10001458 3300032137 Bacteria 6250
50 Ga0316574_0010761 3300035398 Bacteria 5179
51 Ga0316584_0015798 3300036712 Bacteria 5405
52 Ga0395900_0022574 3300037418 Bacteria 6439
53 Ga0316581_0001308 3300037588 Bacteria 5531
54 Ga0395901_0023902 3300038443 Bacteria 6268
55 Ga0436365_0054329 3300039437 Bacteria 2698
56 Ga0436365_0135377 3300039437 Bacteria 2881
57 Ga0436365_1498649 3300039437 Bacteria 7595
58 Ga0439466_0005103 3300041411 Bacteria 5034
59 Ga0451800_0837953 3300041459 Bacteria 1221
60 Ga0439432_007986 3300042006 Bacteria 3731
61 Ga0439449_0002837 3300042007 Bacteria 6738
62 Ga0439462_0008580 3300042015 Bacteria 2580
63 Ga0466965_0029284 3300044683 Bacteria 2679
64 Ga0466966_0062585 3300044684 Bacteria 2346
65 Ga0466961_0011034 3300044693 Bacteria 5775
66 Ga0466963_0013410 3300044694 Bacteria 5033
67 Ga0466963_0024501 3300044694 Bacteria 3843
68 Ga0466963_0071329 3300044694 Bacteria 2338
69 Ga0453684_0341838 3300044712 Bacteria 1689
70 Ga0466970_0007018 3300044765 Bacteria 5638
71 Ga0466970_0026975 3300044765 Bacteria 3012
72 Ga0466957_0041632 3300044842 Bacteria 2778
73 Ga0466960_0016653 3300044901 Bacteria 3193
74 Ga0466959_0018760 3300045049 Bacteria 5081
75 Ga0466958_0003280 3300045836 Bacteria 8373
76 Ga0466958_0013834 3300045836 Bacteria 4601
77 Ga0466967_0004654 3300045976 Bacteria 9309
78 Ga0495590_0000772 3300046457 Bacteria 14521
79 Ga0495653_0026809 3300046463 Bacteria 4617
80 Ga0495580_0140730 3300046472 Bacteria 1672
81 Ga0495639_0058504 3300046475 Bacteria 1763
82 Ga0495664_0014633 3300046477 Bacteria 4449
83 Ga0495665_0000276 3300046531 Bacteria 26147
84 Ga0495586_0003074 3300046535 Bacteria 8997
85 Ga0495587_0003418 3300046536 Bacteria 10590
86 Ga0495645_0001569 3300046543 Bacteria 15486
87 Ga0495667_0008496 3300046559 Bacteria 6970
88 Ga0495588_0029202 3300046674 Bacteria 2765
89 Ga0495657_0015960 3300046675 Bacteria 5480
90 Ga0495600_0016936 3300046809 Bacteria 4632
91 Ga0495581_0012270 3300047315 Bacteria 4962
92 Ga0495680_0011450 3300047322 Bacteria 7853
93 Ga0495675_0014963 3300047444 Bacteria 4904
94 Ga0495593_0041999 3300047673 Bacteria 2456
95 Ga0496101_0016349 3300048904 Bacteria 5010
96 Ga0496102_0018919 3300048905 Bacteria 6060
97 Ga0496102_0124124 3300048905 Bacteria 2413
98 Ga0496102_0187650 3300048905 Bacteria 1948
99 Ga0496103_0036649 3300048906 Bacteria 3004
100 Ga0496104_0026610 3300048907 Bacteria 5345
101 Ga0496105_0037140 3300048908 Bacteria 4012
102 Ga0496110_0186233 3300048913 Bacteria 1885
103 Ga0496110_0242884 3300048913 Bacteria 1639
104 Ga0496112_0004343 3300048915 Bacteria 11985
105 Ga0496114_0003059 3300048917 Bacteria 12811
106 Ga0496114_0004935 3300048917 Bacteria 10398
107 Ga0496126_0005931 3300048929 Bacteria 13770
108 Ga0501034_0002306 3300049571 Bacteria 23347
109 Ga0501034_0008689 3300049571 Bacteria 10697
110 Ga0501037_0093350 3300049573 Bacteria 2176
111 Ga0501039_0214161 3300049575 Bacteria 1515
112 Ga0501043_0000649 3300049579 Bacteria 30670
113 Ga0501069_0016058 3300049585 Bacteria 4018
114 Ga0501070_0004977 3300049586 Bacteria 11337
115 Ga0501080_0000269 3300049742 Bacteria 39318
116 Ga0501083_0017413 3300049744 Bacteria 5009
117 Ga0501044_0026420 3300049823 Bacteria 6144
118 nmdc:mga00v17_133397_c1 3300050491 Bacteria 1588
119 nmdc:mga00v17_247868_c1 3300050491 Bacteria 1155
120 nmdc:mga00v17_79734_c1 3300050491 Bacteria 2042
121 Ga0500554_000407 3300053102 Bacteria 9106
122 Ga0500595_000015 3300053119 Bacteria 224592
123 Ga0500616_0000151 3300053153 Bacteria 116796
124 Ga0500616_0000706 3300053153 Bacteria 38765
125 Ga0500616_0022468 3300053153 Bacteria 3521

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048905 Ga0496102_0124124 Ga0496102_0124124_1174_2298 336
2 3300046475 Ga0495639_0058504 Ga0495639_0058504_19_1140 342
3 3300047322 Ga0495680_0011450 Ga0495680_0011450_83_1204 347
4 3300050491 nmdc:mga00v17_247868_c1 nmdc:mga00v17_247868_c1_10_1113 349
5 3300041459 Ga0451800_0837953 Ga0451800_0837953_56_1192 350
6 3300044684 Ga0466966_0062585 Ga0466966_0062585_39_1253 351
7 3300044694 Ga0466963_0071329 Ga0466963_0071329_163_1377 351
8 3300025914 Ga0207671_10068334 Ga0207671_100683343 353
9 3300044694 Ga0466963_0013410 Ga0466963_0013410_2235_3449 353
10 3300044842 Ga0466957_0041632 Ga0466957_0041632_1298_2512 353
11 3300045836 Ga0466958_0003280 Ga0466958_0003280_3480_4694 353
12 3300031727 Ga0316576_10013120 Ga0316576_100131203 354
13 3300032133 Ga0316583_10003002 Ga0316583_100030023 354
14 3300032137 Ga0316585_10001458 Ga0316585_100014582 354
15 3300035398 Ga0316574_0010761 Ga0316574_0010761_2652_3773 354
16 3300036712 Ga0316584_0015798 Ga0316584_0015798_3388_4509 354
17 3300037588 Ga0316581_0001308 Ga0316581_0001308_3387_4508 354
18 3300050491 nmdc:mga00v17_133397_c1 nmdc:mga00v17_133397_c1_33_1154 355
19 3300006038 Ga0075365_10082959 Ga0075365_100829592 357
20 3300044765 Ga0466970_0007018 Ga0466970_0007018_4379_5602 361
21 3300045049 Ga0466959_0018760 Ga0466959_0018760_1538_2764 361
22 3300005614 Ga0068856_100030087 Ga0068856_1000300873 364
23 3300025949 Ga0207667_10006887 Ga0207667_100068873 364
24 3300026078 Ga0207702_10057601 Ga0207702_100576013 364
25 3300053153 Ga0500616_0000706 Ga0500616_0000706_13469_14731 364
26 3300049575 Ga0501039_0214161 Ga0501039_0214161_29_1243 366
27 3300049571 Ga0501034_0008689 Ga0501034_0008689_2766_3989 371
28 3300049573 Ga0501037_0093350 Ga0501037_0093350_938_2161 371
29 3300049579 Ga0501043_0000649 Ga0501043_0000649_27976_29199 371
30 3300049585 Ga0501069_0016058 Ga0501069_0016058_1440_2663 371
31 3300049586 Ga0501070_0004977 Ga0501070_0004977_9144_10367 371
32 3300049742 Ga0501080_0000269 Ga0501080_0000269_37594_38817 371
33 3300049744 Ga0501083_0017413 Ga0501083_0017413_1351_2574 371
34 3300048913 Ga0496110_0242884 Ga0496110_0242884_239_1420 374
35 3300026067 Ga0207678_10157631 Ga0207678_101576312 375
36 3300039437 Ga0436365_0135377 Ga0436365_0135377_743_1909 376
37 3300039437 Ga0436365_1498649 Ga0436365_1498649_591_1757 376
38 3300046457 Ga0495590_0000772 Ga0495590_0000772_5741_6946 376
39 3300021384 Ga0213876_10058100 Ga0213876_100581002 377
40 3300005719 Ga0068861_100105054 Ga0068861_1001050542 378
41 3300009553 Ga0105249_10039904 Ga0105249_100399045 378
42 3300025961 Ga0207712_10015988 Ga0207712_100159884 378
43 3300026118 Ga0207675_100047609 Ga0207675_1000476092 378
44 3300037418 Ga0395900_0022574 Ga0395900_0022574_2667_3875 378
45 iso_pu_bacteria 2857737099 2857738405 379
46 3300046463 Ga0495653_0026809 Ga0495653_0026809_2551_3771 380
47 3300046477 Ga0495664_0014633 Ga0495664_0014633_664_1884 380
48 3300046531 Ga0495665_0000276 Ga0495665_0000276_8982_10202 380
49 3300046535 Ga0495586_0003074 Ga0495586_0003074_5188_6408 380
50 3300046536 Ga0495587_0003418 Ga0495587_0003418_6579_7799 380
51 3300046543 Ga0495645_0001569 Ga0495645_0001569_2508_3728 380
52 3300046559 Ga0495667_0008496 Ga0495667_0008496_4440_5660 380
53 3300046675 Ga0495657_0015960 Ga0495657_0015960_1389_2609 380
54 3300046809 Ga0495600_0016936 Ga0495600_0016936_1431_2651 380
55 3300047315 Ga0495581_0012270 Ga0495581_0012270_2329_3549 380
56 3300047444 Ga0495675_0014963 Ga0495675_0014963_2423_3643 380
57 3300047673 Ga0495593_0041999 Ga0495593_0041999_577_1797 380
58 iso_pu_bacteria 2932431166 2932433207 380
59 3300053153 Ga0500616_0022468 Ga0500616_0022468_937_2145 381
60 3300005937 Ga0081455_10001272 Ga0081455_1000127233 382
61 3300005983 Ga0081540_1013947 Ga0081540_10139474 382
62 3300025899 Ga0207642_10022162 Ga0207642_100221623 382
63 3300039437 Ga0436365_0054329 Ga0436365_0054329_515_1717 382
64 3300042006 Ga0439432_007986 Ga0439432_007986_1550_2743 382
65 3300048917 Ga0496114_0003059 Ga0496114_0003059_10114_11493 382
66 3300053153 Ga0500616_0000151 Ga0500616_0000151_15857_17065 382
67 3300044683 Ga0466965_0029284 Ga0466965_0029284_166_1398 383
68 3300044693 Ga0466961_0011034 Ga0466961_0011034_4354_5577 383
69 3300044694 Ga0466963_0024501 Ga0466963_0024501_1097_2332 383
70 3300044765 Ga0466970_0026975 Ga0466970_0026975_51_1283 383
71 3300044901 Ga0466960_0016653 Ga0466960_0016653_419_1651 383
72 3300045836 Ga0466958_0013834 Ga0466958_0013834_1100_2332 383
73 3300053102 Ga0500554_000407 Ga0500554_000407_7383_8696 383
74 3300053119 Ga0500595_000015 Ga0500595_000015_163468_164781 383
75 3300005985 Ga0081539_10033944 Ga0081539_100339442 384
76 3300048929 Ga0496126_0005931 Ga0496126_0005931_3410_4642 384
77 3300049571 Ga0501034_0002306 Ga0501034_0002306_5873_7171 384
78 3300049823 Ga0501044_0026420 Ga0501044_0026420_3787_5085 384
79 iso_pu_bacteria 2946024296 2946026414 384
80 3300005330 Ga0070690_100040034 Ga0070690_1000400343 385
81 3300005340 Ga0070689_100071880 Ga0070689_1000718803 385
82 3300005718 Ga0068866_10027655 Ga0068866_100276552 385
83 3300005937 Ga0081455_10145146 Ga0081455_101451462 385
84 3300006237 Ga0097621_100049470 Ga0097621_1000494703 385
85 3300006358 Ga0068871_100026532 Ga0068871_1000265323 385
86 3300006881 Ga0068865_100091065 Ga0068865_1000910652 385
87 3300009148 Ga0105243_10023219 Ga0105243_100232194 385
88 3300009176 Ga0105242_10006052 Ga0105242_100060523 385
89 3300009177 Ga0105248_10190452 Ga0105248_101904522 385
90 3300010375 Ga0105239_10304889 Ga0105239_103048891 385
91 3300013297 Ga0157378_10033151 Ga0157378_100331513 385
92 3300013306 Ga0163162_10129321 Ga0163162_101293213 385
93 3300025918 Ga0207662_10167632 Ga0207662_101676321 385
94 3300025935 Ga0207709_10009180 Ga0207709_100091804 385
95 3300025936 Ga0207670_10018982 Ga0207670_100189822 385
96 3300025937 Ga0207669_10041957 Ga0207669_100419574 385
97 3300026089 Ga0207648_10003477 Ga0207648_1000347710 385
98 3300026118 Ga0207675_100013032 Ga0207675_1000130324 385
99 3300031995 Ga0307409_100010194 Ga0307409_1000101944 385
100 3300032126 Ga0307415_100049239 Ga0307415_1000492394 385
101 3300044712 Ga0453684_0341838 Ga0453684_0341838_102_1322 385
102 3300045976 Ga0466967_0004654 Ga0466967_0004654_1457_2683 385
103 3300048904 Ga0496101_0016349 Ga0496101_0016349_3394_4599 385
104 3300048905 Ga0496102_0187650 Ga0496102_0187650_200_1405 385
105 3300048907 Ga0496104_0026610 Ga0496104_0026610_3040_4245 385
106 3300048908 Ga0496105_0037140 Ga0496105_0037140_1626_2831 385
107 3300048913 Ga0496110_0186233 Ga0496110_0186233_192_1397 385
108 3300048917 Ga0496114_0004935 Ga0496114_0004935_8767_9972 385
109 3300050491 nmdc:mga00v17_79734_c1 nmdc:mga00v17_79734_c1_600_1847 385
110 iso_pu_bacteria 2808606370 2808891929 386
111 iso_pu_bacteria 2839986021 2839987249 386
112 iso_pu_bacteria 2919051321 2919052236 386
113 iso_pu_bacteria 2945920336 2945921408 386
114 iso_pu_bacteria 2946037020 2946038352 386
115 iso_pu_bacteria 2953998280 2953999627 386
116 iso_pu_bacteria 2690315906 2691514580 387
117 iso_pu_bacteria 2643221613 2644083595 388
118 iso_pu_bacteria 2643221721 2644664210 388
119 iso_pu_bacteria 2935890801 2935891591 388
120 3300038443 Ga0395901_0023902 Ga0395901_0023902_4546_5805 390
121 3300046674 Ga0495588_0029202 Ga0495588_0029202_1427_2677 390
122 3300006058 Ga0075432_10003628 Ga0075432_100036283 391
123 3300031548 Ga0307408_100003227 Ga0307408_1000032272 391
124 3300031731 Ga0307405_10011274 Ga0307405_100112743 391
125 3300031852 Ga0307410_10005718 Ga0307410_100057184 391
126 3300031995 Ga0307409_100002762 Ga0307409_1000027622 391
127 3300032002 Ga0307416_100014323 Ga0307416_1000143232 391
128 3300032002 Ga0307416_100016200 Ga0307416_1000162002 391
129 3300041411 Ga0439466_0005103 Ga0439466_0005103_762_2009 391
130 3300042007 Ga0439449_0002837 Ga0439449_0002837_1751_2998 391
131 3300042015 Ga0439462_0008580 Ga0439462_0008580_444_1691 391
132 3300046472 Ga0495580_0140730 Ga0495580_0140730_97_1338 398
133 3300048905 Ga0496102_0018919 Ga0496102_0018919_2892_4133 398
134 3300048906 Ga0496103_0036649 Ga0496103_0036649_152_1393 398
135 3300048915 Ga0496112_0004343 Ga0496112_0004343_4304_5545 398
136 3300002773 JGI25152J39213_1000116 JGI25152J39213_100011619 399
137 3300025258 Ga0209129_1000028 Ga0209129_1000028388 399
138 3300025294 Ga0209025_1000655 Ga0209025_100065529 399

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06224

AlkZ-like

DNA glycosylase AlkZ-like

68

410

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
5n07-assembly1.cif.gz_A-2 structure of the [4fe-4s] form of the no response regulator nsrr 0.9367 224 254
4rs8-assembly1.cif.gz_B apo structure of novel pnob8 plasmid centromere binding protein 0.8822 210 268
4nb5-assembly1.cif.gz_C crystal structure of a transcriptional regulator 0.8787 209 268
4lb5-assembly1.cif.gz_B crystal structure of pkz zalpha in complex with ds(cg)6 (hexagonal form) 0.8782 122 181
7wqu-assembly1.cif.gz_B feoc from klebsiella pneumoniae 0.8737 222 268
ID Description Score Start End Superfamily
af_Q2FV08_10_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9065 209 267 1.10.10.10
af_Q58958_1_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8992 209 268 1.10.10.10
4lb5B00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8782 122 181 1.10.10.10
1ku9A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8779 209 268 1.10.10.10
1ulyA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8742 122 181 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0K2RQU0-F1-model_v4 Uncharacterized protein 1.005 322 399
AF-A0A0K2RQU0-F1-model_v4 Uncharacterized protein 0.9794 322 399
AF-A0A7X5WR06-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9757 302 396
AF-A0A503L9B0-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9714 308 397
AF-A0A530LID8-F1-model_v4 Winged helix-turn-helix domain-containing protein 0.9713 307 399

Feature Viewer

pLDDT pTM Quality
90.62 0.9 High
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Predicted Structure (AlphaFold2)

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