F173844

General Info

Members Datasets Scaffolds Average Seq Length
138 69 134 409

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_085916|Ga0400483_085916_1679_2977
Length 432
Sequence MVLNYIWIGFFIVAFIVACIRVVGYHLQYNHGWFSEIAFDIADRDVFSAIVESTFEMAKTSVDISIYLIGVMTLWLGIMKIGEKGGAVQLLSRLTAPFFTRIFPEVPRNHPAMGNMLMNFCANMLGLDNAATPFGLKAMDSLQEINKTPDKASNAQIMFLVLNTSGLTIIPISIMALRAAAGAANPADVFLPLLLATFFSTVAGLIVVSVFQRINLFNWVVIAYVGGLSLFIAGLFALLKHMAQDQITVFSNLVGNFLLFGFIIFFFVLGVRKKINLYESFIEGAKEGFSMAIKIIPYLVAMLVGIGVFRASGAFDFVLGGIAWFFAALGFDTQFVPALPTALMKPLSGSGARGMMVEAMTNYGADSFVGRLTSVLQGSTETTFYTLAVYYGAVNIKKTRYTLTCGLIADLAGIIAAIFIMYWLTSISFFGL

Samples

Sample ID Description Type Environment
1 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
2 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
3 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
27 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
28 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
29 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
31 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
32 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
34 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
36 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
39 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
40 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
43 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
44 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
45 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
46 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
47 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
54 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
55 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
56 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
57 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
58 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
59 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
67 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
68 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
69 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.1
Metatranscriptomes 0
Isolates 2.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.04
Nodule 0
Rhizoplane 0
Rhizosphere 74.64
Stem 0
Stem Tuber 0
Unclassified 12.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10008365 3300001979 Bacteria 4126
2 JGI24739J22299_10016016 3300001989 Bacteria 2719
3 JGI25154J39366_1000277 3300002738 Bacteria 31257
4 JGI25153J46596_10000271 3300003215 Bacteria 40909
5 rootH1_10002274 3300003316 Bacteria 15145
6 rootH2_10106904 3300003320 Bacteria 2959
7 rootL2_10021457 3300003322 Bacteria 12030
8 rootL2_10079161 3300003322 Bacteria 12315
9 rootH1_10002591 3300003323 Bacteria 4054
10 rootH1_10017455 3300003323 Bacteria 20752
11 rootH1_10065583 3300003323 Bacteria 19600
12 rootH1_10229488 3300003323 Bacteria 3062
13 JGI25160J50197_1024387 3300003354 Bacteria 1717
14 Ga0055526_1017584 3300003771 Bacteria 2724
15 Ga0055526_1024361 3300003771 Bacteria 1982
16 Ga0055528_1001068 3300003790 Bacteria 18074
17 Ga0055530_10012379 3300003791 Bacteria 2981
18 Ga0065165_1000355 3300005262 Bacteria 75282
19 Ga0070675_100225049 3300005354 Bacteria 1635
20 Ga0070698_100000332 3300005471 Bacteria 48527
21 Ga0070699_100119757 3300005518 Bacteria 2314
22 Ga0075430_100022217 3300006846 Bacteria 5395
23 Ga0075429_100009472 3300006880 Bacteria 8451
24 Ga0111539_10027659 3300009094 Bacteria 6928
25 Ga0111539_10145911 3300009094 Bacteria 2771
26 Ga0111539_10370655 3300009094 Bacteria 1667
27 Ga0114129_10332737 3300009147 Bacteria 2016
28 Ga0157371_10024105 3300013102 Bacteria 4445
29 Ga0157372_10000494 3300013307 Bacteria 43474
30 Ga0213872_10000106 3300021361 Bacteria 77503
31 Ga0213872_10000235 3300021361 Bacteria 48674
32 Ga0213872_10026099 3300021361 Bacteria 2684
33 Ga0209646_1000006 3300025246 Bacteria 694084
34 Ga0209026_1000220 3300025250 Bacteria 78595
35 Ga0209673_1001178 3300025273 Bacteria 28341
36 Ga0209564_1003703 3300025295 Bacteria 10058
37 Ga0209564_1005522 3300025295 Bacteria 7167
38 Ga0209758_1000790 3300025297 Bacteria 45258
39 Ga0209758_1023815 3300025297 Bacteria 2752
40 Ga0209758_1029655 3300025297 Bacteria 2281
41 Ga0209050_1003014 3300025298 Bacteria 13058
42 Ga0209050_1014881 3300025298 Bacteria 3311
43 Ga0207426_1001377 3300025302 Bacteria 20590
44 Ga0207426_1001952 3300025302 Bacteria 14722
45 Ga0207426_1012277 3300025302 Bacteria 3224
46 Ga0207659_10071535 3300025926 Bacteria 2533
47 Ga0207659_10162456 3300025926 Bacteria 1755
48 Ga0207428_10123123 3300027907 Unclassified 1987
49 Ga0268265_10263618 3300028380 Bacteria 1533
50 Ga0265338_10184334 3300028800 Unclassified 1588
51 Ga0265316_10041612 3300031344 Bacteria 3676
52 Ga0307408_100001464 3300031548 Bacteria 17516
53 Ga0316579_10017199 3300031691 Bacteria 3169
54 Ga0316576_10119848 3300031727 Bacteria 1975
55 Ga0316578_10001254 3300031728 Bacteria 10127
56 Ga0307405_10128096 3300031731 Bacteria 1749
57 Ga0316577_10011850 3300031733 Bacteria 4735
58 Ga0307413_10100737 3300031824 Bacteria 1908
59 Ga0307410_10057823 3300031852 Bacteria 2642
60 Ga0307406_10126112 3300031901 Bacteria 1789
61 Ga0307407_10056578 3300031903 Bacteria 2272
62 Ga0307412_10028439 3300031911 Bacteria 3497
63 Ga0307416_100038378 3300032002 Bacteria 3695
64 Ga0307414_10100541 3300032004 Bacteria 2175
65 Ga0307414_10116994 3300032004 Unclassified 2042
66 Ga0307414_10173120 3300032004 Bacteria 1728
67 Ga0307415_100232547 3300032126 Unclassified 1485
68 Ga0316580_10017349 3300032139 Bacteria 2214
69 Ga0316582_0121436 3300036647 Bacteria 1748
70 Ga0316584_0002584 3300036712 Bacteria 11509
71 Ga0316581_0005822 3300037588 Bacteria 3237
72 Ga0316581_0007892 3300037588 Bacteria 2877
73 Ga0400483_026560 3300039062 Bacteria 2200
74 Ga0400483_085916 3300039062 Bacteria 10992
75 Ga0400483_151956 3300039062 Bacteria 2574
76 Ga0436361_0436262 3300039447 Bacteria 1591
77 Ga0436361_0455044 3300039447 Bacteria 9977
78 Ga0451855_0823106 3300041511 Bacteria 1544
79 Ga0451577_0000010 3300042876 Bacteria 616686
80 Ga0451577_0000754 3300042876 Bacteria 49345
81 Ga0451577_0001692 3300042876 Bacteria 28454
82 Ga0451577_0018124 3300042876 Bacteria 6489
83 Ga0451577_0019593 3300042876 Bacteria 6219
84 Ga0451577_0020524 3300042876 Bacteria 6062
85 Ga0451577_0029437 3300042876 Bacteria 4964
86 Ga0451577_0033988 3300042876 Bacteria 4598
87 Ga0451577_0145280 3300042876 Bacteria 2132
88 Ga0451577_0171107 3300042876 Bacteria 1957
89 Ga0451577_0313592 3300042876 Bacteria 1422
90 Ga0453683_0000031 3300044673 Bacteria 241998
91 Ga0453683_0000135 3300044673 Bacteria 107930
92 Ga0453683_0001274 3300044673 Bacteria 22351
93 Ga0453683_0005564 3300044673 Bacteria 8769
94 Ga0453683_0018831 3300044673 Bacteria 4428
95 Ga0453683_0031258 3300044673 Bacteria 3364
96 Ga0453684_0000191 3300044712 Bacteria 267816
97 Ga0453684_0000469 3300044712 Bacteria 160413
98 Ga0453684_0000553 3300044712 Bacteria 141396
99 Ga0453684_0000920 3300044712 Bacteria 97531
100 Ga0453684_0001431 3300044712 Bacteria 68233
101 Ga0453684_0002120 3300044712 Bacteria 49982
102 Ga0453684_0003158 3300044712 Bacteria 37931
103 Ga0453684_0005508 3300044712 Bacteria 24986
104 Ga0453684_0005639 3300044712 Bacteria 24612
105 Ga0453684_0014901 3300044712 Bacteria 12365
106 Ga0453684_0015987 3300044712 Bacteria 11793
107 Ga0453684_0031423 3300044712 Bacteria 7464
108 Ga0453684_0031558 3300044712 Bacteria 7444
109 Ga0453684_0033055 3300044712 Bacteria 7219
110 Ga0453684_0036849 3300044712 Bacteria 6730
111 Ga0453684_0037265 3300044712 Bacteria 6676
112 Ga0453684_0048476 3300044712 Bacteria 5616
113 Ga0453684_0071529 3300044712 Bacteria 4385
114 Ga0453684_0083537 3300044712 Bacteria 3974
115 Ga0453684_0123324 3300044712 Bacteria 3124
116 Ga0451576_0000088 3300045051 Bacteria 234139
117 Ga0451576_0000112 3300045051 Bacteria 209574
118 Ga0451576_0000297 3300045051 Bacteria 120836
119 Ga0451576_0001102 3300045051 Bacteria 49331
120 Ga0451576_0001301 3300045051 Bacteria 43240
121 Ga0451576_0004975 3300045051 Bacteria 16908
122 Ga0451576_0007513 3300045051 Bacteria 13003
123 Ga0451576_0015796 3300045051 Bacteria 8353
124 Ga0451576_0023035 3300045051 Bacteria 6749
125 Ga0451576_0042016 3300045051 Bacteria 4827
126 Ga0451576_0134432 3300045051 Bacteria 2579
127 Ga0451576_0243023 3300045051 Bacteria 1880
128 Ga0451576_0297065 3300045051 Bacteria 1689
129 Ga0451576_0320142 3300045051 Unclassified 1623
130 Ga0501034_0252040 3300049571 Bacteria 1710
131 Ga0501047_0027469 3300049581 Bacteria 5483
132 Ga0501223_002204 3300049663 Unclassified 4365
133 Ga0501257_001539 3300049686 Bacteria 4811
134 Ga0501264_000447 3300049761 Bacteria 6290

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031548 Ga0307408_100001464 Ga0307408_10000146419 373
2 3300042876 Ga0451577_0313592 Ga0451577_0313592_246_1412 385
3 3300045051 Ga0451576_0297065 Ga0451576_0297065_76_1248 385
4 3300039062 Ga0400483_026560 Ga0400483_026560_525_1814 391
5 3300042876 Ga0451577_0029437 Ga0451577_0029437_1341_2573 391
6 3300044712 Ga0453684_0014901 Ga0453684_0014901_10822_12054 391
7 3300042876 Ga0451577_0000754 Ga0451577_0000754_7300_8532 392
8 3300044673 Ga0453683_0001274 Ga0453683_0001274_6387_7619 392
9 3300044712 Ga0453684_0002120 Ga0453684_0002120_7300_8532 392
10 3300045051 Ga0451576_0001102 Ga0451576_0001102_7294_8526 392
11 3300003323 rootH1_10229488 rootH1_102294882 393
12 3300039062 Ga0400483_151956 Ga0400483_151956_1155_2435 394
13 3300042876 Ga0451577_0020524 Ga0451577_0020524_1298_2578 396
14 3300044712 Ga0453684_0005639 Ga0453684_0005639_4942_6222 396
15 3300003323 rootH1_10065583 rootH1_100655831 397
16 3300009094 Ga0111539_10370655 Ga0111539_103706552 397
17 3300027907 Ga0207428_10123123 Ga0207428_101231232 397
18 3300045051 Ga0451576_0134432 Ga0451576_0134432_484_1719 398
19 3300006846 Ga0075430_100022217 Ga0075430_1000222173 399
20 3300009094 Ga0111539_10027659 Ga0111539_100276596 399
21 3300044673 Ga0453683_0018831 Ga0453683_0018831_1445_2677 399
22 3300044712 Ga0453684_0015987 Ga0453684_0015987_10402_11634 399
23 3300045051 Ga0451576_0007513 Ga0451576_0007513_185_1417 399
24 3300003322 rootL2_10021457 rootL2_100214578 401
25 3300025926 Ga0207659_10071535 Ga0207659_100715352 401
26 iso_pu_bacteria 2896109856 2896110774 406
27 iso_pu_bacteria 2910245624 2910249455 406
28 iso_pu_bacteria 2929921140 2929925202 406
29 iso_pu_bacteria 8003151029 8003155108 406
30 3300049571 Ga0501034_0252040 Ga0501034_0252040_90_1319 408
31 3300003316 rootH1_10002274 rootH1_100022749 409
32 3300021361 Ga0213872_10000106 Ga0213872_1000010646 409
33 3300021361 Ga0213872_10000235 Ga0213872_1000023533 409
34 3300021361 Ga0213872_10026099 Ga0213872_100260992 409
35 3300039447 Ga0436361_0436262 Ga0436361_0436262_320_1567 409
36 3300039447 Ga0436361_0455044 Ga0436361_0455044_6879_8126 409
37 3300001979 JGI24740J21852_10008365 JGI24740J21852_100083652 410
38 3300001989 JGI24739J22299_10016016 JGI24739J22299_100160162 410
39 3300002738 JGI25154J39366_1000277 JGI25154J39366_10002776 410
40 3300003215 JGI25153J46596_10000271 JGI25153J46596_1000027131 410
41 3300003320 rootH2_10106904 rootH2_101069041 410
42 3300003322 rootL2_10079161 rootL2_100791616 410
43 3300003323 rootH1_10002591 rootH1_100025911 410
44 3300003323 rootH1_10017455 rootH1_100174557 410
45 3300003354 JGI25160J50197_1024387 JGI25160J50197_10243871 410
46 3300003771 Ga0055526_1017584 Ga0055526_10175842 410
47 3300003771 Ga0055526_1024361 Ga0055526_10243611 410
48 3300003790 Ga0055528_1001068 Ga0055528_10010686 410
49 3300003791 Ga0055530_10012379 Ga0055530_100123792 410
50 3300005262 Ga0065165_1000355 Ga0065165_100035548 410
51 3300005354 Ga0070675_100225049 Ga0070675_1002250492 410
52 3300005471 Ga0070698_100000332 Ga0070698_10000033227 410
53 3300005518 Ga0070699_100119757 Ga0070699_1001197572 410
54 3300006880 Ga0075429_100009472 Ga0075429_1000094724 410
55 3300009094 Ga0111539_10145911 Ga0111539_101459112 410
56 3300009147 Ga0114129_10332737 Ga0114129_103327371 410
57 3300013102 Ga0157371_10024105 Ga0157371_100241052 410
58 3300013307 Ga0157372_10000494 Ga0157372_100004949 410
59 3300025246 Ga0209646_1000006 Ga0209646_1000006497 410
60 3300025250 Ga0209026_1000220 Ga0209026_100022049 410
61 3300025273 Ga0209673_1001178 Ga0209673_10011784 410
62 3300025295 Ga0209564_1003703 Ga0209564_10037036 410
63 3300025295 Ga0209564_1005522 Ga0209564_10055222 410
64 3300025297 Ga0209758_1000790 Ga0209758_10007908 410
65 3300025297 Ga0209758_1023815 Ga0209758_10238152 410
66 3300025297 Ga0209758_1029655 Ga0209758_10296552 410
67 3300025298 Ga0209050_1003014 Ga0209050_10030146 410
68 3300025298 Ga0209050_1014881 Ga0209050_10148812 410
69 3300025302 Ga0207426_1001377 Ga0207426_10013779 410
70 3300025302 Ga0207426_1001952 Ga0207426_10019524 410
71 3300025302 Ga0207426_1012277 Ga0207426_10122773 410
72 3300025926 Ga0207659_10162456 Ga0207659_101624562 410
73 3300028380 Ga0268265_10263618 Ga0268265_102636182 410
74 3300028800 Ga0265338_10184334 Ga0265338_101843342 410
75 3300031344 Ga0265316_10041612 Ga0265316_100416123 410
76 3300031691 Ga0316579_10017199 Ga0316579_100171992 410
77 3300031727 Ga0316576_10119848 Ga0316576_101198481 410
78 3300031728 Ga0316578_10001254 Ga0316578_100012543 410
79 3300031731 Ga0307405_10128096 Ga0307405_101280962 410
80 3300031733 Ga0316577_10011850 Ga0316577_100118504 410
81 3300031824 Ga0307413_10100737 Ga0307413_101007372 410
82 3300031852 Ga0307410_10057823 Ga0307410_100578233 410
83 3300031901 Ga0307406_10126112 Ga0307406_101261122 410
84 3300031903 Ga0307407_10056578 Ga0307407_100565782 410
85 3300031911 Ga0307412_10028439 Ga0307412_100284391 410
86 3300032002 Ga0307416_100038378 Ga0307416_1000383782 410
87 3300032004 Ga0307414_10100541 Ga0307414_101005411 410
88 3300032004 Ga0307414_10116994 Ga0307414_101169942 410
89 3300032004 Ga0307414_10173120 Ga0307414_101731202 410
90 3300032126 Ga0307415_100232547 Ga0307415_1002325472 410
91 3300032139 Ga0316580_10017349 Ga0316580_100173491 410
92 3300036647 Ga0316582_0121436 Ga0316582_0121436_445_1677 410
93 3300036712 Ga0316584_0002584 Ga0316584_0002584_8644_9876 410
94 3300037588 Ga0316581_0005822 Ga0316581_0005822_1849_3084 410
95 3300037588 Ga0316581_0007892 Ga0316581_0007892_1445_2677 410
96 3300039062 Ga0400483_085916 Ga0400483_085916_1679_2977 410
97 3300041511 Ga0451855_0823106 Ga0451855_0823106_281_1513 410
98 3300042876 Ga0451577_0000010 Ga0451577_0000010_448927_450159 410
99 3300042876 Ga0451577_0001692 Ga0451577_0001692_18278_19510 410
100 3300042876 Ga0451577_0018124 Ga0451577_0018124_132_1364 410
101 3300042876 Ga0451577_0019593 Ga0451577_0019593_2930_4162 410
102 3300042876 Ga0451577_0033988 Ga0451577_0033988_1565_2797 410
103 3300042876 Ga0451577_0145280 Ga0451577_0145280_846_2078 410
104 3300042876 Ga0451577_0171107 Ga0451577_0171107_464_1744 410
105 3300044673 Ga0453683_0000031 Ga0453683_0000031_93108_94340 410
106 3300044673 Ga0453683_0000135 Ga0453683_0000135_65508_66740 410
107 3300044673 Ga0453683_0005564 Ga0453683_0005564_7337_8569 410
108 3300044673 Ga0453683_0031258 Ga0453683_0031258_11_1243 410
109 3300044712 Ga0453684_0000191 Ga0453684_0000191_166528_167760 410
110 3300044712 Ga0453684_0000469 Ga0453684_0000469_152561_153793 410
111 3300044712 Ga0453684_0000553 Ga0453684_0000553_21819_23051 410
112 3300044712 Ga0453684_0000920 Ga0453684_0000920_58299_59531 410
113 3300044712 Ga0453684_0001431 Ga0453684_0001431_49181_50413 410
114 3300044712 Ga0453684_0003158 Ga0453684_0003158_8965_10197 410
115 3300044712 Ga0453684_0005508 Ga0453684_0005508_22358_23644 410
116 3300044712 Ga0453684_0031423 Ga0453684_0031423_2100_3380 410
117 3300044712 Ga0453684_0031558 Ga0453684_0031558_5111_6400 410
118 3300044712 Ga0453684_0033055 Ga0453684_0033055_4708_5988 410
119 3300044712 Ga0453684_0036849 Ga0453684_0036849_2340_3572 410
120 3300044712 Ga0453684_0037265 Ga0453684_0037265_3436_4716 410
121 3300044712 Ga0453684_0048476 Ga0453684_0048476_2670_3902 410
122 3300044712 Ga0453684_0071529 Ga0453684_0071529_3140_4372 410
123 3300044712 Ga0453684_0083537 Ga0453684_0083537_1340_2626 410
124 3300044712 Ga0453684_0123324 Ga0453684_0123324_1628_2860 410
125 3300045051 Ga0451576_0000088 Ga0451576_0000088_88457_89689 410
126 3300045051 Ga0451576_0000112 Ga0451576_0000112_142836_144068 410
127 3300045051 Ga0451576_0000297 Ga0451576_0000297_77734_78966 410
128 3300045051 Ga0451576_0001301 Ga0451576_0001301_29411_30643 410
129 3300045051 Ga0451576_0004975 Ga0451576_0004975_7578_8813 410
130 3300045051 Ga0451576_0015796 Ga0451576_0015796_2872_4104 410
131 3300045051 Ga0451576_0023035 Ga0451576_0023035_4981_6213 410
132 3300045051 Ga0451576_0042016 Ga0451576_0042016_3549_4781 410
133 3300045051 Ga0451576_0243023 Ga0451576_0243023_378_1610 410
134 3300045051 Ga0451576_0320142 Ga0451576_0320142_281_1513 410
135 3300049581 Ga0501047_0027469 Ga0501047_0027469_1149_2381 410
136 3300049663 Ga0501223_002204 Ga0501223_002204_2135_3367 410
137 3300049686 Ga0501257_001539 Ga0501257_001539_1246_2478 410
138 3300049761 Ga0501264_000447 Ga0501264_000447_2587_3819 410

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07670

Gate

Nucleoside recognition

65

181

0.89

PF07670

Gate

Nucleoside recognition

292

397

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4f35-assembly2.cif.gz_B crystal structure of a bacterial dicarboxylate/sodium symporter 0.4286 10 410
7qha-assembly1.cif.gz_B cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in amphipol 0.4218 14 407
7qha-assembly1.cif.gz_B cryo-em structure of the tripartite atp-independent periplasmic (trap) transporter siaqm from photobacterium profundum in amphipol 0.409 14 407
4f35-assembly1.cif.gz_C crystal structure of a bacterial dicarboxylate/sodium symporter 0.4076 10 410
4f35-assembly2.cif.gz_B crystal structure of a bacterial dicarboxylate/sodium symporter 0.3938 10 410
ID Description Score Start End Superfamily
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.4298 1 406 1.20.1530.20
af_I6YCG9_3_406_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.4289 1 406 1.20.1530.20
af_A4QP73_103_235_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3914 42 197 1.25.40.10
af_A4QP73_103_235_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3755 42 197 1.25.40.10
af_Q8VZQ8_412_602_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.3117 42 283 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A413QE21-F1-model_v4 deleted 0.9514 84 197
AF-A0A661EXG6-F1-model_v4 Spore maturation protein 0.9395 300 410 GO:0005886
AF-A0A1L5L598-F1-model_v4 Nucleoside recognition 0.9353 76 347 GO:0005886
AF-A0A1L5L598-F1-model_v4 Nucleoside recognition 0.9321 76 347 GO:0005886
AF-A0A4Q6GMN5-F1-model_v4 Nucleoside transporter/FeoB GTPase Gate domain-containing protein 0.9303 306 410 GO:0005886

Feature Viewer

pLDDT pTM Quality
82.67 0.78 High
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Predicted Structure (AlphaFold2)

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