F173380

General Info

Members Datasets Scaffolds Average Seq Length
138 100 134 264

Family's Representative Sequence

Representative Sequence 3300026041|Ga0207639_10471227|Ga0207639_104712271
Length 296
Sequence MSFAFQISRPFAFFVVPASPMVSAASDGGREMSKLVEVTDEGHVRTIRLNRPEKKNALSNALAWSVVEAVDKAAGDDDVWVVAITGSGDAFCAGLDLSPGSEPYHPKSPMAAQLDDISWVGEFLLAIRKRCDKPVVGGINGVAVGAGLGLAMAADVRLIARSARLMAGYTRIGGSPDAGLTITLPQAMGYEQAMRFMMENRTVLGDEAVALGMAGEVVDDAAFAARLAAYCQELCAWSPITLRLLKRGMVSAVAGTDMEQQLRMEVSNIRIAFASDDAKEARQAFFEKRKPVFVGK

Samples

Sample ID Description Type Environment
1 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
2 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
3 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
4 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
35 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
58 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
61 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
64 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
65 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
71 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
72 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
85 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
88 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
89 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
90 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
91 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
98 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
99 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
100 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.65
Metatranscriptomes 1.45
Isolates 2.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.97
Nodule 0
Rhizoplane 2.17
Rhizosphere 83.33
Stem 0
Stem Tuber 0
Unclassified 6.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065165_1040940 3300005262 Bacteria 1378
2 Ga0070658_10117639 3300005327 Bacteria 2207
3 Ga0070666_10010087 3300005335 Bacteria 5898
4 Ga0070660_100018122 3300005339 Bacteria 5138
5 Ga0070661_100252676 3300005344 Bacteria 1361
6 Ga0070668_100641801 3300005347 Bacteria 932
7 Ga0070659_100000110 3300005366 Bacteria 60436
8 Ga0070659_100055555 3300005366 Bacteria 3121
9 Ga0070667_100076025 3300005367 Bacteria 2867
10 Ga0070681_10010403 3300005458 Bacteria 9188
11 Ga0070681_10080251 3300005458 Bacteria 3218
12 Ga0070707_100567369 3300005468 Bacteria 1097
13 Ga0068855_100044639 3300005563 Bacteria 5245
14 Ga0070664_100232678 3300005564 Bacteria 1652
15 Ga0068857_100385474 3300005577 Bacteria 1302
16 Ga0068854_100308296 3300005578 Bacteria 1283
17 Ga0068864_100260900 3300005618 Bacteria 1612
18 Ga0068863_100058669 3300005841 Bacteria 3642
19 Ga0075363_100005320 3300006048 Bacteria 5712
20 Ga0075363_100062929 3300006048 Bacteria 2001
21 Ga0075362_10053820 3300006177 Bacteria 1807
22 Ga0075367_10002968 3300006178 Bacteria 7929
23 Ga0075370_10178624 3300006353 Bacteria 1249
24 Ga0068865_100000821 3300006881 Bacteria 17500
25 Ga0105240_10003215 3300009093 Bacteria 25601
26 Ga0105240_10354531 3300009093 Bacteria 1664
27 Ga0105240_10469085 3300009093 Bacteria 1405
28 Ga0105240_10516699 3300009093 Bacteria 1326
29 Ga0105248_10005214 3300009177 Bacteria 14318
30 Ga0105248_10226860 3300009177 Bacteria 2103
31 Ga0105238_10008323 3300009551 Bacteria 10374
32 Ga0105238_10031014 3300009551 Bacteria 5442
33 Ga0105238_10034722 3300009551 Bacteria 5130
34 Ga0105238_10128072 3300009551 Bacteria 2517
35 Ga0105238_10257710 3300009551 Bacteria 1723
36 Ga0105249_10315691 3300009553 Bacteria 1573
37 Ga0105239_10475706 3300010375 Bacteria 1419
38 Ga0157375_10487740 3300013308 Bacteria 1397
39 Ga0163163_10168234 3300014325 Bacteria 2238
40 Ga0206354_11432172 3300020081 Bacteria 1175
41 Ga0213872_10045924 3300021361 Bacteria 1988
42 Ga0207680_10005539 3300025903 Bacteria 6035
43 Ga0207705_10001713 3300025909 Bacteria 17393
44 Ga0207695_10001012 3300025913 Bacteria 49532
45 Ga0207695_10076617 3300025913 Bacteria 3399
46 Ga0207695_10319121 3300025913 Bacteria 1443
47 Ga0207671_10067512 3300025914 Bacteria 2663
48 Ga0207660_10025764 3300025917 Bacteria 3996
49 Ga0207657_10003130 3300025919 Bacteria 17691
50 Ga0207657_10009608 3300025919 Bacteria 9707
51 Ga0207652_10100889 3300025921 Bacteria 2548
52 Ga0207694_10174090 3300025924 Bacteria 1743
53 Ga0207694_10260568 3300025924 Bacteria 1420
54 Ga0207694_10539744 3300025924 Bacteria 978
55 Ga0207644_10106368 3300025931 Bacteria 2115
56 Ga0207690_10000584 3300025932 Bacteria 23588
57 Ga0207690_10320554 3300025932 Bacteria 1218
58 Ga0207669_10335332 3300025937 Bacteria 1163
59 Ga0207704_10001651 3300025938 Bacteria 10018
60 Ga0207711_10008535 3300025941 Bacteria 8570
61 Ga0207711_10138829 3300025941 Bacteria 2185
62 Ga0207679_10254457 3300025945 Bacteria 1495
63 Ga0207667_10093638 3300025949 Bacteria 3102
64 Ga0207667_10150039 3300025949 Bacteria 2400
65 Ga0207667_10411099 3300025949 Bacteria 1377
66 Ga0207640_10099053 3300025981 Bacteria 2039
67 Ga0207658_10124406 3300025986 Bacteria 2061
68 Ga0207639_10287534 3300026041 Bacteria 1448
69 Ga0207639_10471227 3300026041 Bacteria 1143
70 Ga0207702_10174121 3300026078 Bacteria 1976
71 Ga0207641_10166909 3300026088 Bacteria 2006
72 Ga0207674_10153549 3300026116 Bacteria 2258
73 Ga0268266_10000062 3300028379 Bacteria 253490
74 Ga0265334_10109103 3300028573 Bacteria 996
75 Ga0307517_10068310 3300028786 Bacteria 3240
76 Ga0265338_10021987 3300028800 Bacteria 6627
77 Ga0265338_10053244 3300028800 Bacteria 3623
78 Ga0307511_10014563 3300030521 Bacteria 7651
79 Ga0265770_1014217 3300030878 Bacteria 1199
80 Ga0265325_10000306 3300031241 Bacteria 34466
81 Ga0265340_10029615 3300031247 Bacteria 2750
82 Ga0265339_10001211 3300031249 Bacteria 19460
83 Ga0265339_10009651 3300031249 Bacteria 6043
84 Ga0265331_10020857 3300031250 Bacteria 3359
85 Ga0265327_10000166 3300031251 Bacteria 141539
86 Ga0265327_10001207 3300031251 Bacteria 34828
87 Ga0265327_10038387 3300031251 Bacteria 2613
88 Ga0307513_10037326 3300031456 Bacteria 5408
89 Ga0265313_10012171 3300031595 Bacteria 5284
90 Ga0265313_10165296 3300031595 Bacteria 938
91 Ga0265314_10012697 3300031711 Bacteria 6851
92 Ga0307413_10064653 3300031824 Bacteria 2274
93 Ga0307416_100514526 3300032002 Bacteria 1264
94 Ga0373936_0009511 3300035113 Bacteria 3664
95 Ga0395899_0002516 3300037312 Bacteria 14851
96 Ga0395900_0000006 3300037418 Bacteria 495364
97 Ga0395898_0142503 3300037466 Bacteria 2294
98 Ga0395905_0008597 3300037471 Bacteria 10062
99 Ga0395905_0072639 3300037471 Bacteria 3226
100 Ga0395901_0000001 3300038443 Bacteria 800383
101 Ga0436365_1208919 3300039437 Bacteria 922
102 Ga0436360_0304509 3300039438 Bacteria 906
103 Ga0436361_0566243 3300039447 Bacteria 17128
104 Ga0495583_0069502 3300046506 Bacteria 1551
105 Ga0495630_0350368 3300046517 Bacteria 1130
106 Ga0495630_0391617 3300046517 Bacteria 1064
107 Ga0495648_0166234 3300046524 Bacteria 1135
108 Ga0495642_0000614 3300046528 Bacteria 17935
109 Ga0495642_0010207 3300046528 Bacteria 3597
110 Ga0495621_0015254 3300046539 Bacteria 2448
111 Ga0495668_0009006 3300046616 Bacteria 6165
112 Ga0495668_0062339 3300046616 Bacteria 2055
113 Ga0495668_0111568 3300046616 Bacteria 1496
114 Ga0495611_0000881 3300046648 Bacteria 16332
115 Ga0495611_0008326 3300046648 Bacteria 4392
116 Ga0495669_0129044 3300046684 Bacteria 1189
117 Ga0495670_0085426 3300046691 Bacteria 1611
118 Ga0495672_0001071 3300047320 Bacteria 27863
119 Ga0495672_0046730 3300047320 Bacteria 2580
120 Ga0495672_0051356 3300047320 Bacteria 2429
121 Ga0495677_0002919 3300047445 Bacteria 6657
122 Ga0495677_0161965 3300047445 Bacteria 864
123 Ga0496112_0109218 3300048915 Bacteria 2736
124 Ga0496115_0003809 3300048918 Bacteria 10861
125 Ga0496115_0004665 3300048918 Bacteria 9930
126 Ga0496126_0000823 3300048929 Bacteria 55212
127 Ga0501034_0308204 3300049571 Bacteria 1518
128 Ga0501034_0530196 3300049571 Bacteria 1088
129 Ga0501047_0649066 3300049581 Bacteria 875
130 nmdc:mga07m45_170960_c1 3300050496 Bacteria 1263
131 Ga0500595_003101 3300053119 Bacteria 7870
132 Ga0500595_016442 3300053119 Bacteria 2756
133 Ga0500608_024907 3300053122 Bacteria 2798
134 Ga0500645_006782 3300053730 Bacteria 4052

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031247 Ga0265340_10029615 Ga0265340_100296151 248
2 3300005577 Ga0068857_100385474 Ga0068857_1003854742 250
3 3300046539 Ga0495621_0015254 Ga0495621_0015254_1031_1825 250
4 3300026116 Ga0207674_10153549 Ga0207674_101535493 254
5 3300039438 Ga0436360_0304509 Ga0436360_0304509_69_881 254
6 3300005366 Ga0070659_100055555 Ga0070659_1000555555 255
7 3300005458 Ga0070681_10080251 Ga0070681_100802515 255
8 3300005563 Ga0068855_100044639 Ga0068855_1000446397 255
9 3300025909 Ga0207705_10001713 Ga0207705_100017136 255
10 3300025917 Ga0207660_10025764 Ga0207660_100257642 255
11 3300025919 Ga0207657_10003130 Ga0207657_1000313012 255
12 3300025921 Ga0207652_10100889 Ga0207652_101008892 255
13 3300025932 Ga0207690_10320554 Ga0207690_103205542 255
14 3300025949 Ga0207667_10411099 Ga0207667_104110992 255
15 3300009093 Ga0105240_10469085 Ga0105240_104690852 257
16 3300009551 Ga0105238_10031014 Ga0105238_100310142 257
17 3300025914 Ga0207671_10067512 Ga0207671_100675124 257
18 3300025924 Ga0207694_10539744 Ga0207694_105397442 257
19 3300005335 Ga0070666_10010087 Ga0070666_100100874 259
20 3300005367 Ga0070667_100076025 Ga0070667_1000760252 259
21 3300009177 Ga0105248_10226860 Ga0105248_102268602 259
22 3300025903 Ga0207680_10005539 Ga0207680_100055394 259
23 3300025941 Ga0207711_10138829 Ga0207711_101388292 259
24 3300025949 Ga0207667_10093638 Ga0207667_100936382 259
25 3300025986 Ga0207658_10124406 Ga0207658_101244062 259
26 iso_pu_bacteria 2643221598 2644001597 260
27 iso_pu_bacteria 2643221614 2644087983 260
28 iso_pu_bacteria 2643221661 2644344130 260
29 iso_pu_bacteria 2643221666 2644367340 260
30 3300020081 Ga0206354_11432172 Ga0206354_114321722 262
31 3300005327 Ga0070658_10117639 Ga0070658_101176391 263
32 3300005339 Ga0070660_100018122 Ga0070660_1000181225 263
33 3300005344 Ga0070661_100252676 Ga0070661_1002526761 263
34 3300005347 Ga0070668_100641801 Ga0070668_1006418011 263
35 3300005366 Ga0070659_100000110 Ga0070659_10000011015 263
36 3300005468 Ga0070707_100567369 Ga0070707_1005673692 263
37 3300005564 Ga0070664_100232678 Ga0070664_1002326782 263
38 3300005618 Ga0068864_100260900 Ga0068864_1002609002 263
39 3300005841 Ga0068863_100058669 Ga0068863_1000586693 263
40 3300006048 Ga0075363_100005320 Ga0075363_1000053203 263
41 3300006048 Ga0075363_100062929 Ga0075363_1000629292 263
42 3300006177 Ga0075362_10053820 Ga0075362_100538202 263
43 3300006178 Ga0075367_10002968 Ga0075367_100029683 263
44 3300006353 Ga0075370_10178624 Ga0075370_101786242 263
45 3300006881 Ga0068865_100000821 Ga0068865_1000008213 263
46 3300009093 Ga0105240_10003215 Ga0105240_1000321519 263
47 3300009093 Ga0105240_10354531 Ga0105240_103545312 263
48 3300009093 Ga0105240_10516699 Ga0105240_105166991 263
49 3300009177 Ga0105248_10005214 Ga0105248_1000521412 263
50 3300009551 Ga0105238_10008323 Ga0105238_100083232 263
51 3300009551 Ga0105238_10034722 Ga0105238_100347222 263
52 3300009551 Ga0105238_10257710 Ga0105238_102577102 263
53 3300009553 Ga0105249_10315691 Ga0105249_103156912 263
54 3300010375 Ga0105239_10475706 Ga0105239_104757062 263
55 3300013308 Ga0157375_10487740 Ga0157375_104877401 263
56 3300014325 Ga0163163_10168234 Ga0163163_101682342 263
57 3300025913 Ga0207695_10001012 Ga0207695_100010129 263
58 3300025913 Ga0207695_10319121 Ga0207695_103191211 263
59 3300025919 Ga0207657_10009608 Ga0207657_100096086 263
60 3300025924 Ga0207694_10260568 Ga0207694_102605682 263
61 3300025931 Ga0207644_10106368 Ga0207644_101063683 263
62 3300025932 Ga0207690_10000584 Ga0207690_1000058414 263
63 3300025937 Ga0207669_10335332 Ga0207669_103353321 263
64 3300025938 Ga0207704_10001651 Ga0207704_100016519 263
65 3300025941 Ga0207711_10008535 Ga0207711_100085355 263
66 3300025945 Ga0207679_10254457 Ga0207679_102544572 263
67 3300026041 Ga0207639_10287534 Ga0207639_102875342 263
68 3300026088 Ga0207641_10166909 Ga0207641_101669092 263
69 3300028379 Ga0268266_10000062 Ga0268266_10000062131 263
70 3300028573 Ga0265334_10109103 Ga0265334_101091031 263
71 3300028786 Ga0307517_10068310 Ga0307517_100683102 263
72 3300028800 Ga0265338_10053244 Ga0265338_100532443 263
73 3300030521 Ga0307511_10014563 Ga0307511_100145634 263
74 3300030878 Ga0265770_1014217 Ga0265770_10142171 263
75 3300031241 Ga0265325_10000306 Ga0265325_1000030617 263
76 3300031249 Ga0265339_10001211 Ga0265339_100012117 263
77 3300031249 Ga0265339_10009651 Ga0265339_100096516 263
78 3300031250 Ga0265331_10020857 Ga0265331_100208573 263
79 3300031251 Ga0265327_10000166 Ga0265327_1000016691 263
80 3300031251 Ga0265327_10001207 Ga0265327_1000120711 263
81 3300031456 Ga0307513_10037326 Ga0307513_100373262 263
82 3300031595 Ga0265313_10012171 Ga0265313_100121714 263
83 3300031595 Ga0265313_10165296 Ga0265313_101652962 263
84 3300031711 Ga0265314_10012697 Ga0265314_100126974 263
85 3300032002 Ga0307416_100514526 Ga0307416_1005145262 263
86 3300037312 Ga0395899_0002516 Ga0395899_0002516_456_1256 263
87 3300037418 Ga0395900_0000006 Ga0395900_0000006_378603_379403 263
88 3300037466 Ga0395898_0142503 Ga0395898_0142503_265_1065 263
89 3300037471 Ga0395905_0008597 Ga0395905_0008597_265_1065 263
90 3300037471 Ga0395905_0072639 Ga0395905_0072639_2313_3107 263
91 3300038443 Ga0395901_0000001 Ga0395901_0000001_421851_422651 263
92 3300046506 Ga0495583_0069502 Ga0495583_0069502_259_1053 263
93 3300046517 Ga0495630_0350368 Ga0495630_0350368_16_810 263
94 3300046528 Ga0495642_0010207 Ga0495642_0010207_229_1023 263
95 3300046616 Ga0495668_0062339 Ga0495668_0062339_768_1562 263
96 3300046616 Ga0495668_0111568 Ga0495668_0111568_111_905 263
97 3300046648 Ga0495611_0008326 Ga0495611_0008326_2498_3292 263
98 3300046684 Ga0495669_0129044 Ga0495669_0129044_19_813 263
99 3300046691 Ga0495670_0085426 Ga0495670_0085426_18_812 263
100 3300047445 Ga0495677_0161965 Ga0495677_0161965_14_808 263
101 3300048918 Ga0496115_0003809 Ga0496115_0003809_4648_5442 263
102 3300048918 Ga0496115_0004665 Ga0496115_0004665_3930_4724 263
103 3300048929 Ga0496126_0000823 Ga0496126_0000823_30600_31394 263
104 3300049571 Ga0501034_0308204 Ga0501034_0308204_506_1300 263
105 3300049571 Ga0501034_0530196 Ga0501034_0530196_219_1013 263
106 3300050496 nmdc:mga07m45_170960_c1 nmdc:mga07m45_170960_c1_388_1179 263
107 3300053119 Ga0500595_003101 Ga0500595_003101_5631_6425 263
108 3300053119 Ga0500595_016442 Ga0500595_016442_821_1651 263
109 3300005262 Ga0065165_1040940 Ga0065165_10409402 264
110 3300005458 Ga0070681_10010403 Ga0070681_100104032 264
111 3300005578 Ga0068854_100308296 Ga0068854_1003082961 264
112 3300009551 Ga0105238_10128072 Ga0105238_101280723 264
113 3300021361 Ga0213872_10045924 Ga0213872_100459242 264
114 3300025913 Ga0207695_10076617 Ga0207695_100766172 264
115 3300025924 Ga0207694_10174090 Ga0207694_101740902 264
116 3300025949 Ga0207667_10150039 Ga0207667_101500392 264
117 3300025981 Ga0207640_10099053 Ga0207640_100990531 264
118 3300026041 Ga0207639_10471227 Ga0207639_104712271 264
119 3300026078 Ga0207702_10174121 Ga0207702_101741212 264
120 3300028800 Ga0265338_10021987 Ga0265338_100219873 264
121 3300031251 Ga0265327_10038387 Ga0265327_100383872 264
122 3300031824 Ga0307413_10064653 Ga0307413_100646533 264
123 3300035113 Ga0373936_0009511 Ga0373936_0009511_1312_2109 264
124 3300039437 Ga0436365_1208919 Ga0436365_1208919_14_811 264
125 3300039447 Ga0436361_0566243 Ga0436361_0566243_8064_8861 264
126 3300046517 Ga0495630_0391617 Ga0495630_0391617_117_914 264
127 3300046524 Ga0495648_0166234 Ga0495648_0166234_144_947 264
128 3300046528 Ga0495642_0000614 Ga0495642_0000614_5325_6131 264
129 3300046616 Ga0495668_0009006 Ga0495668_0009006_1098_1904 264
130 3300046648 Ga0495611_0000881 Ga0495611_0000881_5548_6354 264
131 3300047320 Ga0495672_0001071 Ga0495672_0001071_11980_12783 264
132 3300047320 Ga0495672_0046730 Ga0495672_0046730_702_1508 264
133 3300047320 Ga0495672_0051356 Ga0495672_0051356_1577_2380 264
134 3300047445 Ga0495677_0002919 Ga0495677_0002919_164_970 264
135 3300048915 Ga0496112_0109218 Ga0496112_0109218_1836_2633 264
136 3300049581 Ga0501047_0649066 Ga0501047_0649066_48_845 264
137 3300053122 Ga0500608_024907 Ga0500608_024907_1116_1913 264
138 3300053730 Ga0500645_006782 Ga0500645_006782_2169_2975 264

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

39

296

0.91

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

44

290

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ej5-assembly2.cif.gz_B crystal structure of gk2038 protein (enoyl-coa hydratase subunit ii) from geobacillus kaustophilus 0.9281 3 264
7mcm-assembly1.cif.gz_B crystal structure of enoyl-coa hydratase from mycolicibacterium smegmatis 0.9276 1 236
6wyi-assembly1.cif.gz_A crystal structure of echa19, enoyl-coa hydratase from mycobacterium tuberculosis 0.9166 3 264
6ijk-assembly1.cif.gz_A enoyl-coa hydratase/isomerase family protein from cupriavidus necator h16 0.9165 3 262
6sla-assembly2.cif.gz_FFF crystal structure of isomerase paag mutant - d136n with oxepin-coa 0.9158 4 264
ID Description Score Start End Superfamily
4lk5B01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9349 2 187 3.90.226.10
af_P77467_205_262_1.10.12.10 Mainly Alpha;Orthogonal Bundle;Lyase 2-enoyl-coa Hydratase; Chain;Lyase 2-enoyl-coa Hydratase, Chain 0.9256 208 264 1.10.12.10
2ej5A01 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9187 3 205 3.90.226.10
2ej5B02 Mainly Alpha;Orthogonal Bundle;Lyase 2-enoyl-coa Hydratase; Chain;Lyase 2-enoyl-coa Hydratase, Chain 0.916 208 264 1.10.12.10
4fzwC02 Mainly Alpha;Orthogonal Bundle;Lyase 2-enoyl-coa Hydratase; Chain;Lyase 2-enoyl-coa Hydratase, Chain 0.9151 208 264 1.10.12.10
ID Description Score Start End GO Terms
AF-A0A6B1H917-F1-model_v4 Enoyl-CoA hydratase 0.9658 100 264
AF-A0A3C0KP34-F1-model_v4 Enoyl-CoA hydratase 0.9583 90 264 GO:0006635
GO:0016836
AF-A0A536HJA5-F1-model_v4 Enoyl-CoA hydratase (EC 4.2.1.17) 0.9484 101 264 GO:0004300
GO:0006635
AF-A0A7W1LYZ4-F1-model_v4 Enoyl-CoA hydratase/isomerase family protein 0.948 109 264 GO:0006635
GO:0016829
GO:0016853
AF-A0A3C0KP34-F1-model_v4 Enoyl-CoA hydratase 0.9477 90 264 GO:0006635
GO:0016836

Feature Viewer

pLDDT pTM Quality
85.9 0.86 High
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Predicted Structure (AlphaFold2)

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