F170957

General Info

Members Datasets Scaffolds Average Seq Length
137 84 274 349

Family's Representative Sequence

Representative Sequence 3300046543|Ga0495645_0038812|Ga0495645_0038812_2103_3227
Length 374
Sequence MTNPIKIACYNLASFHSLTHHRGSTDVKKLSTNGRCGLLAGGNWIIDQVKLIDVYPQPEQLGNIRGQSQGTGGAPYNVLIDLAKSGVPFPLFGAGLVGNDSLGKQILESCRTNNIDARHIATTAKAPTSYTDVMTEQGHGRRTFFHARGANALWSGDDLNFEKSRARIFHLGYLLLLDALDQPDSKFGTKAARLLAQAQAAGIKTSVDVVSEDSDRFAKIVCPALKHVDYCILNEIEAGKTTGFKVRQANGKLDTVALRHAAGALLQHGVRELIVIHFPEGAFARTLLGEHAWQSSLKLPANYIAGTAGAGDAFCAGALLGIHEGWDLKRCLLTGVCIAAASLADATCTAGVKSLNASLSLAKKFGFRPKLDGE

Samples

Sample ID Description Type Environment
1 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
47 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
50 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
51 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
54 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
57 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
63 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
64 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
65 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
66 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
72 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
73 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
74 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
75 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
78 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
79 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
80 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 2738541295 Bacillus sp. OK085 Isolate Unclassified
84 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.54
Metatranscriptomes 0
Isolates 1.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.73
Rhizosphere 97.08
Stem 0
Stem Tuber 0
Unclassified 29.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495645_0038812 3300046543 Unclassified 3473
2 Ga0065707_10094467 3300005295 Bacteria 3488
3 Ga0070690_100075041 3300005330 Bacteria 2204
4 Ga0070689_100000199 3300005340 Bacteria 35970
5 Ga0070689_100001931 3300005340 Bacteria 13413
6 Ga0070689_100047065 3300005340 Bacteria 3325
7 Ga0070688_100018792 3300005365 Bacteria 3996
8 Ga0070701_10015057 3300005438 Unclassified 3561
9 Ga0070711_100112671 3300005439 Bacteria 1999
10 Ga0070694_100051854 3300005444 Unclassified 2771
11 Ga0070681_10268953 3300005458 Bacteria 1616
12 Ga0070685_10037534 3300005466 Bacteria 2744
13 Ga0070706_100005764 3300005467 Bacteria 11765
14 Ga0070686_100046770 3300005544 Unclassified 2732
15 Ga0070704_100055066 3300005549 Unclassified 2818
16 Ga0070704_100177527 3300005549 Bacteria 1700
17 Ga0068857_100012495 3300005577 Bacteria 7393
18 Ga0070702_100013237 3300005615 Unclassified 4160
19 Ga0068859_100070837 3300005617 Unclassified 3522
20 Ga0068859_100307646 3300005617 Unclassified 1678
21 Ga0068863_100009826 3300005841 Bacteria 9322
22 Ga0068863_100502881 3300005841 Bacteria 1193
23 Ga0070716_100201649 3300006173 Bacteria 1323
24 Ga0070712_100116588 3300006175 Unclassified 2003
25 Ga0097621_100013592 3300006237 Bacteria 6073
26 Ga0068871_100009543 3300006358 Bacteria 7041
27 Ga0075428_100000248 3300006844 Bacteria 52850
28 Ga0075428_100096330 3300006844 Bacteria 3225
29 Ga0075428_100231877 3300006844 Unclassified 1992
30 Ga0075428_100343918 3300006844 Bacteria 1601
31 Ga0075430_100240244 3300006846 Bacteria 1501
32 Ga0075431_100012298 3300006847 Bacteria 8638
33 Ga0075431_100044641 3300006847 Bacteria 4570
34 Ga0075431_100356729 3300006847 Unclassified 1469
35 Ga0075429_100073155 3300006880 Unclassified 2985
36 Ga0097620_100070838 3300006931 Unclassified 3522
37 Ga0097620_100307664 3300006931 Unclassified 1678
38 Ga0105240_10004056 3300009093 Bacteria 22532
39 Ga0111539_10037592 3300009094 Bacteria 5844
40 Ga0111539_10059038 3300009094 Unclassified 4550
41 Ga0111539_10090936 3300009094 Bacteria 3586
42 Ga0111539_10172068 3300009094 Unclassified 2530
43 Ga0111539_10182955 3300009094 Bacteria 2448
44 Ga0111539_10551814 3300009094 Unclassified 1342
45 Ga0105245_10054000 3300009098 Bacteria 3608
46 Ga0105248_10449389 3300009177 Unclassified 1452
47 Ga0105249_10348291 3300009553 Bacteria 1500
48 Ga0157374_10011544 3300013296 Bacteria 7656
49 Ga0157375_10000165 3300013308 Bacteria 61905
50 Ga0163163_10001280 3300014325 Bacteria 21246
51 Ga0163163_10232631 3300014325 Bacteria 1892
52 Ga0163163_10346792 3300014325 Unclassified 1540
53 Ga0163163_10349944 3300014325 Unclassified 1533
54 Ga0157376_10229512 3300014969 Bacteria 1724
55 Ga0213872_10005526 3300021361 Bacteria 6479
56 Ga0213872_10010298 3300021361 Bacteria 4453
57 Ga0213872_10041224 3300021361 Bacteria 2107
58 Ga0207695_10018439 3300025913 Bacteria 8072
59 Ga0207695_10084723 3300025913 Bacteria 3199
60 Ga0207693_10143708 3300025915 Unclassified 1876
61 Ga0207646_10469885 3300025922 Bacteria 1134
62 Ga0207659_10103446 3300025926 Unclassified 2152
63 Ga0207670_10005824 3300025936 Bacteria 6803
64 Ga0207670_10008210 3300025936 Bacteria 5877
65 Ga0207670_10010656 3300025936 Bacteria 5304
66 Ga0207665_10244106 3300025939 Bacteria 1325
67 Ga0207641_10143272 3300026088 Bacteria 2159
68 Ga0207674_10005516 3300026116 Bacteria 15022
69 Ga0207428_10176733 3300027907 Bacteria 1614
70 Ga0265337_1019050 3300028556 Unclassified 2170
71 Ga0265319_1048468 3300028563 Bacteria 1410
72 Ga0265338_10024005 3300028800 Bacteria 6245
73 Ga0265338_10048120 3300028800 Bacteria 3884
74 Ga0265332_10053855 3300031238 Bacteria 1726
75 Ga0265320_10009886 3300031240 Bacteria 5715
76 Ga0265320_10133760 3300031240 Bacteria 1126
77 Ga0265329_10000767 3300031242 Bacteria 16292
78 Ga0265314_10000073 3300031711 Bacteria 148691
79 Ga0316576_10057160 3300031727 Unclassified 2851
80 Ga0316577_10059539 3300031733 Bacteria 2132
81 Ga0307409_100245588 3300031995 Bacteria 1633
82 Ga0373926_0012937 3300035083 Bacteria 2826
83 Ga0373923_0077633 3300035111 Bacteria 1436
84 Ga0373935_0042943 3300035692 Unclassified 2844
85 Ga0373927_0023610 3300035695 Unclassified 4026
86 Ga0316584_0064649 3300036712 Unclassified 2740
87 Ga0373925_0004248 3300037068 Bacteria 10853
88 Ga0373925_0318919 3300037068 Bacteria 1257
89 Ga0400483_140044 3300039062 Unclassified 2832
90 Ga0400483_226123 3300039062 Unclassified 1720
91 Ga0436360_0944039 3300039438 Unclassified 3612
92 Ga0436361_0183299 3300039447 Bacteria 10387
93 Ga0436361_0383432 3300039447 Bacteria 4311
94 Ga0436362_0447201 3300039453 Bacteria 2252
95 Ga0436362_0766042 3300039453 Bacteria 1337
96 Ga0451577_0015620 3300042876 Bacteria 7055
97 Ga0451577_0041469 3300042876 Bacteria 4131
98 Ga0451577_0354976 3300042876 Bacteria 1330
99 Ga0453684_0004989 3300044712 Bacteria 26989
100 Ga0453684_0010825 3300044712 Bacteria 15459
101 Ga0453684_0018703 3300044712 Bacteria 10615
102 Ga0453684_0171715 3300044712 Bacteria 2554
103 Ga0451576_0025805 3300045051 Bacteria 6330
104 Ga0451576_0037078 3300045051 Bacteria 5166
105 Ga0451576_0073490 3300045051 Bacteria 3558
106 Ga0451576_0129779 3300045051 Bacteria 2627
107 Ga0451576_0134603 3300045051 Unclassified 2577
108 Ga0451576_0230420 3300045051 Unclassified 1935
109 Ga0451576_0292475 3300045051 Unclassified 1703
110 Ga0451576_0312501 3300045051 Unclassified 1644
111 Ga0495618_0099806 3300046514 Bacteria 1858
112 Ga0495630_0000041 3300046517 Bacteria 104947
113 Ga0495630_0025473 3300046517 Bacteria 4375
114 Ga0495586_0000001 3300046535 Bacteria 231314
115 Ga0495586_0032276 3300046535 Bacteria 2807
116 Ga0495645_0171031 3300046543 Unclassified 1496
117 Ga0495588_0067684 3300046674 Unclassified 1854
118 Ga0495599_0117197 3300046678 Eukaryota 1656
119 Ga0495658_0002470 3300046683 Bacteria 9311
120 Ga0495658_0019620 3300046683 Unclassified 3532
121 Ga0495624_0046066 3300046690 Unclassified 2774
122 Ga0495624_0147675 3300046690 Bacteria 1439
123 Ga0495674_0016906 3300047319 Bacteria 6801
124 Ga0495674_0264881 3300047319 Bacteria 1411
125 Ga0495676_0005314 3300047321 Bacteria 11793
126 Ga0496107_0014771 3300048910 Bacteria 5467
127 nmdc:mga09592_295590_c1 3300050508 Bacteria 1404
128 nmdc:mga0qj67_332650_c1 3300050509 Bacteria 1229
129 nmdc:mga06r32_160925_c1 3300050510 Bacteria 2227
130 nmdc:mga06r32_29867_c1 3300050510 Bacteria 5112
131 nmdc:mga06r32_311008_c1 3300050510 Unclassified 1561
132 nmdc:mga08y16_199535_c1 3300050511 Bacteria 2073
133 nmdc:mga08y16_28593_c1 3300050511 Bacteria 5876
134 nmdc:mga08y16_35845_c1 3300050511 Bacteria 5210
135 nmdc:mga08y16_445153_c1 3300050511 Unclassified 1322
136 2738815180 2738541295 Bacteria 5730091
137 3006971365 3006969106 Bacteria 4739423
138 Ga0495645_0038812
139 Ga0065707_10094467
140 Ga0070690_100075041
141 Ga0070689_100000199
142 Ga0070689_100001931
143 Ga0070689_100047065
144 Ga0070688_100018792
145 Ga0070701_10015057
146 Ga0070711_100112671
147 Ga0070694_100051854
148 Ga0070681_10268953
149 Ga0070685_10037534
150 Ga0070706_100005764
151 Ga0070686_100046770
152 Ga0070704_100055066
153 Ga0070704_100177527
154 Ga0068857_100012495
155 Ga0070702_100013237
156 Ga0068859_100070837
157 Ga0068859_100307646
158 Ga0068863_100009826
159 Ga0068863_100502881
160 Ga0070716_100201649
161 Ga0070712_100116588
162 Ga0097621_100013592
163 Ga0068871_100009543
164 Ga0075428_100000248
165 Ga0075428_100096330
166 Ga0075428_100231877
167 Ga0075428_100343918
168 Ga0075430_100240244
169 Ga0075431_100012298
170 Ga0075431_100044641
171 Ga0075431_100356729
172 Ga0075429_100073155
173 Ga0097620_100070838
174 Ga0097620_100307664
175 Ga0105240_10004056
176 Ga0111539_10037592
177 Ga0111539_10059038
178 Ga0111539_10090936
179 Ga0111539_10172068
180 Ga0111539_10182955
181 Ga0111539_10551814
182 Ga0105245_10054000
183 Ga0105248_10449389
184 Ga0105249_10348291
185 Ga0157374_10011544
186 Ga0157375_10000165
187 Ga0163163_10001280
188 Ga0163163_10232631
189 Ga0163163_10346792
190 Ga0163163_10349944
191 Ga0157376_10229512
192 Ga0213872_10005526
193 Ga0213872_10010298
194 Ga0213872_10041224
195 Ga0207695_10018439
196 Ga0207695_10084723
197 Ga0207693_10143708
198 Ga0207646_10469885
199 Ga0207659_10103446
200 Ga0207670_10005824
201 Ga0207670_10008210
202 Ga0207670_10010656
203 Ga0207665_10244106
204 Ga0207641_10143272
205 Ga0207674_10005516
206 Ga0207428_10176733
207 Ga0265337_1019050
208 Ga0265319_1048468
209 Ga0265338_10024005
210 Ga0265338_10048120
211 Ga0265332_10053855
212 Ga0265320_10009886
213 Ga0265320_10133760
214 Ga0265329_10000767
215 Ga0265314_10000073
216 Ga0316576_10057160
217 Ga0316577_10059539
218 Ga0307409_100245588
219 Ga0373926_0012937
220 Ga0373923_0077633
221 Ga0373935_0042943
222 Ga0373927_0023610
223 Ga0316584_0064649
224 Ga0373925_0004248
225 Ga0373925_0318919
226 Ga0400483_140044
227 Ga0400483_226123
228 Ga0436360_0944039
229 Ga0436361_0183299
230 Ga0436361_0383432
231 Ga0436362_0447201
232 Ga0436362_0766042
233 Ga0451577_0015620
234 Ga0451577_0041469
235 Ga0451577_0354976
236 Ga0453684_0004989
237 Ga0453684_0010825
238 Ga0453684_0018703
239 Ga0453684_0171715
240 Ga0451576_0025805
241 Ga0451576_0037078
242 Ga0451576_0073490
243 Ga0451576_0129779
244 Ga0451576_0134603
245 Ga0451576_0230420
246 Ga0451576_0292475
247 Ga0451576_0312501
248 Ga0495618_0099806
249 Ga0495630_0000041
250 Ga0495630_0025473
251 Ga0495586_0000001
252 Ga0495586_0032276
253 Ga0495645_0171031
254 Ga0495588_0067684
255 Ga0495599_0117197
256 Ga0495658_0002470
257 Ga0495658_0019620
258 Ga0495624_0046066
259 Ga0495624_0147675
260 Ga0495674_0016906
261 Ga0495674_0264881
262 Ga0495676_0005314
263 Ga0496107_0014771
264 nmdc:mga09592_295590_c1
265 nmdc:mga0qj67_332650_c1
266 nmdc:mga06r32_160925_c1
267 nmdc:mga06r32_29867_c1
268 nmdc:mga06r32_311008_c1
269 nmdc:mga08y16_199535_c1
270 nmdc:mga08y16_28593_c1
271 nmdc:mga08y16_35845_c1
272 nmdc:mga08y16_445153_c1
273 2738815180
274 3006971365

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

42

355

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6znx-assembly1.cif.gz_A ribokinase from thermus species 0.9172 26 349
8cqx-assembly1.cif.gz_A ribokinase from t.sp mutant a92g 0.9061 26 349
6znx-assembly1.cif.gz_A ribokinase from thermus species 0.9027 26 349
8cqx-assembly1.cif.gz_A ribokinase from t.sp mutant a92g 0.8919 26 349
5c41-assembly1.cif.gz_A crystal structure of human ribokinase in complex with amppcp in p21 spacegroup and with 4 protomers 0.8885 26 344
ID Description Score Start End Superfamily
af_Q9VK96_1_314_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8653 22 357 3.40.1190.20
af_Q9VK96_1_314_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8575 22 357 3.40.1190.20
af_O77425_1_304_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8571 23 342 3.40.1190.20
6iltB00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8531 23 353 3.40.1190.20
1v1aA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8522 26 345 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A800BCV9-F1-model_v4 deleted 0.9987 265 359
AF-A0A2R8AYL7-F1-model_v4 ATP-dependent 6-phosphofructokinase isozyme 2 (EC 2.7.1.11) 0.9815 249 356 GO:0003872
AF-A0A382PNP8-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9739 76 190
AF-A0A7C4AB11-F1-model_v4 Carbohydrate kinase family protein 0.9692 17 213 GO:0005829
GO:0006796
GO:0016301
AF-A0A0C1GU94-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9678 21 360 GO:0005829
GO:0006796
GO:0016301

Map