F166217

General Info

Members Datasets Scaffolds Average Seq Length
136 115 272 168

Family's Representative Sequence

Representative Sequence 3300006195|Ga0075366_10200894|Ga0075366_102008942
Length 195
Sequence LYVATRKFKKTASIHVCRFTFHENLSTMTIAEFDQLDVEKKSEMLLQCCGSTNWVNKMIASLPAEDLVDLLEIAEEQWYVCSEQDWREAFSHHPKIGDIDSLKEKFASTAHWAEGEQSSVKEAAEQTLRQLAEGNNEYETKFGYIFIVFASGKTADEMLGLLKQRLYNSAEVEIQIAMEEQLKITKLRLEKLFGI

Samples

Sample ID Description Type Environment
1 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
33 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
47 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
50 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
51 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
52 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
53 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
54 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
55 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
56 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
60 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
61 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
62 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
63 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
64 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
65 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
66 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
67 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
68 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
75 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
76 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
77 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
78 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
89 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
94 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
97 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
98 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
99 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
100 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
101 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
102 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
103 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
104 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
105 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
106 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
107 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
108 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
109 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
112 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
113 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
114 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
115 2738541278 Niastella sp. CF465 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0
Isolates 0.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.65
Nodule 0
Rhizoplane 2.21
Rhizosphere 75.74
Stem 0
Stem Tuber 0
Unclassified 20.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075366_10200894 3300006195 Bacteria 1213
2 Ga0070668_100432134 3300005347 Bacteria 1129
3 Ga0070674_100866645 3300005356 Unclassified 784
4 Ga0070673_100526124 3300005364 Bacteria 1072
5 Ga0070673_100715581 3300005364 Bacteria 920
6 Ga0070688_100745039 3300005365 Unclassified 762
7 Ga0070708_100143601 3300005445 Bacteria 2215
8 Ga0068867_101135890 3300005459 Bacteria 715
9 Ga0070707_100510996 3300005468 Unclassified 1163
10 Ga0070665_100048035 3300005548 Unclassified 4285
11 Ga0068857_100282089 3300005577 Unclassified 1528
12 Ga0068856_100114940 3300005614 Bacteria 2690
13 Ga0068859_101576323 3300005617 Bacteria 725
14 Ga0068866_10650266 3300005718 Unclassified 718
15 Ga0068863_100259027 3300005841 Unclassified 1681
16 Ga0068860_100110440 3300005843 Bacteria 2628
17 Ga0068860_101330584 3300005843 Unclassified 739
18 Ga0081539_10026842 3300005985 Bacteria 3661
19 Ga0097621_100534698 3300006237 Bacteria 1065
20 Ga0068865_100241418 3300006881 Bacteria 1422
21 Ga0068865_100843781 3300006881 Bacteria 793
22 Ga0097620_101576447 3300006931 Bacteria 725
23 Ga0105240_10000160 3300009093 Bacteria 137390
24 Ga0105245_11982005 3300009098 Unclassified 636
25 Ga0114129_10129715 3300009147 Unclassified 3464
26 Ga0105241_10111620 3300009174 Bacteria 2189
27 Ga0105248_10213399 3300009177 Bacteria 2174
28 Ga0105237_10000028 3300009545 Bacteria 201366
29 Ga0105238_10017190 3300009551 Bacteria 7346
30 Ga0157374_10053709 3300013296 Bacteria 3757
31 Ga0157372_10844310 3300013307 Bacteria 1063
32 Ga0157375_10219930 3300013308 Unclassified 2057
33 Ga0157380_10392668 3300014326 Bacteria 1313
34 Ga0157379_10654662 3300014968 Unclassified 984
35 Ga0182007_10107282 3300015262 Unclassified 927
36 Ga0209258_108407 3300025242 Bacteria 1452
37 Ga0207642_10109519 3300025899 Unclassified 1403
38 Ga0207695_10000027 3300025913 Bacteria 612456
39 Ga0207671_10008118 3300025914 Bacteria 8958
40 Ga0207646_10590457 3300025922 Bacteria 997
41 Ga0207686_10572274 3300025934 Bacteria 886
42 Ga0207704_10218771 3300025938 Bacteria 1407
43 Ga0207651_10426700 3300025960 Bacteria 1133
44 Ga0207668_10439284 3300025972 Bacteria 1111
45 Ga0207641_10577657 3300026088 Unclassified 1098
46 Ga0207674_10560014 3300026116 Unclassified 1104
47 Ga0268264_10465948 3300028381 Bacteria 1227
48 Ga0307515_10223992 3300028794 Unclassified 1691
49 Ga0307513_10224791 3300031456 Bacteria 1695
50 Ga0307509_10041406 3300031507 Bacteria 4998
51 Ga0307509_10129847 3300031507 Bacteria 2478
52 Ga0307408_100007798 3300031548 Bacteria 7076
53 Ga0307408_100016951 3300031548 Bacteria 4870
54 Ga0307508_10001613 3300031616 Bacteria 25177
55 Ga0307412_10004806 3300031911 Bacteria 7537
56 Ga0307416_100082484 3300032002 Bacteria 2724
57 Ga0307414_10607052 3300032004 Bacteria 982
58 Ga0373936_0337411 3300035113 Bacteria 685
59 Ga0373931_0083974 3300035691 Bacteria 1763
60 Ga0373927_0878095 3300035695 Bacteria 592
61 Ga0395899_0044033 3300037312 Bacteria 3326
62 Ga0395899_0191099 3300037312 Bacteria 1433
63 Ga0395905_0046001 3300037471 Bacteria 4093
64 Ga0395901_0025339 3300038443 Bacteria 6088
65 Ga0439436_0070858 3300041404 Bacteria 971
66 Ga0439436_0196913 3300041404 Bacteria 576
67 Ga0439439_0014477 3300041406 Bacteria 1921
68 Ga0451791_1413494 3300041451 Bacteria 824
69 Ga0451800_1299237 3300041459 Bacteria 1063
70 Ga0451804_1093970 3300041463 Bacteria 1530
71 Ga0439457_001395 3300042014 Bacteria 7274
72 Ga0451577_0019463 3300042876 Bacteria 6242
73 Ga0451577_0439701 3300042876 Unclassified 1184
74 Ga0466969_0001622 3300044656 Bacteria 12048
75 Ga0466972_0010582 3300044658 Bacteria 4630
76 Ga0453683_0023889 3300044673 Bacteria 3893
77 Ga0453683_0095826 3300044673 Unclassified 1862
78 Ga0453683_0393138 3300044673 Unclassified 893
79 Ga0466966_0000091 3300044684 Bacteria 56015
80 Ga0453684_0419952 3300044712 Bacteria 1494
81 Ga0453684_0666596 3300044712 Unclassified 1134
82 Ga0466957_0000530 3300044842 Bacteria 19237
83 Ga0466957_0021586 3300044842 Bacteria 3795
84 Ga0466959_0000002 3300045049 Bacteria 362671
85 Ga0451576_0002312 3300045051 Bacteria 28868
86 Ga0451576_0132206 3300045051 Bacteria 2602
87 Ga0451576_0452031 3300045051 Unclassified 1349
88 Ga0495638_0189366 3300046460 Unclassified 1168
89 Ga0495638_0504721 3300046460 Unclassified 609
90 Ga0495609_0228990 3300046538 Bacteria 770
91 Ga0495625_0093480 3300046660 Bacteria 2076
92 Ga0495686_0056964 3300047472 Unclassified 2440
93 Ga0495686_0324805 3300047472 Bacteria 843
94 Ga0501032_0005292 3300049569 Bacteria 9596
95 Ga0501033_0000610 3300049570 Bacteria 33102
96 Ga0501034_0000172 3300049571 Bacteria 120544
97 Ga0501034_0311416 3300049571 Bacteria 1509
98 Ga0501036_0003876 3300049572 Bacteria 11998
99 Ga0501037_0006523 3300049573 Bacteria 8538
100 Ga0501038_0030830 3300049574 Bacteria 4740
101 Ga0501039_0000906 3300049575 Bacteria 21601
102 Ga0501043_0004436 3300049579 Bacteria 11402
103 Ga0501047_0015973 3300049581 Bacteria 7159
104 Ga0501047_0091133 3300049581 Bacteria 2926
105 Ga0501048_0083037 3300049582 Bacteria 2259
106 Ga0501257_006923 3300049686 Bacteria 2525
107 Ga0501225_0000064 3300049705 Bacteria 34604
108 Ga0501035_0002297 3300049822 Bacteria 18882
109 Ga0501044_0000801 3300049823 Bacteria 37915
110 Ga0501044_0001010 3300049823 Bacteria 33787
111 Ga0501045_0001691 3300049824 Bacteria 14854
112 nmdc:mga0k408_351597_c1 3300050493 Bacteria 878
113 nmdc:mga0k408_689599_c1 3300050493 Unclassified 599
114 nmdc:mga05p37_345966_c1 3300050507 Unclassified 1752
115 nmdc:mga0n895_297196_c1 3300050512 Bacteria 1637
116 Ga0500578_0000034 3300053086 Bacteria 136582
117 Ga0500646_0024904 3300053090 Bacteria 1613
118 Ga0500583_0000063 3300053092 Bacteria 66256
119 Ga0500583_0000494 3300053092 Bacteria 12122
120 Ga0500651_0340537 3300053093 Bacteria 853
121 Ga0500553_089242 3300053101 Bacteria 1361
122 Ga0500593_180127 3300053117 Bacteria 786
123 Ga0500642_0163033 3300053130 Bacteria 1045
124 Ga0500655_032165 3300053133 Bacteria 1013
125 Ga0500561_0096159 3300053137 Bacteria 882
126 Ga0500573_0255651 3300053140 Bacteria 900
127 Ga0500588_0054099 3300053146 Bacteria 1263
128 Ga0500589_089578 3300053147 Bacteria 1358
129 Ga0500603_026257 3300053150 Bacteria 1471
130 Ga0500604_0033178 3300053151 Bacteria 1526
131 Ga0500616_0041235 3300053153 Bacteria 2479
132 Ga0500622_0119419 3300053156 Bacteria 1280
133 Ga0500636_0285153 3300053177 Unclassified 822
134 Ga0500570_194408 3300053724 Bacteria 628
135 Ga0500587_017532 3300053739 Bacteria 919
136 2738727158 2738541278 Bacteria 9755573
137 Ga0075366_10200894
138 Ga0070668_100432134
139 Ga0070674_100866645
140 Ga0070673_100526124
141 Ga0070673_100715581
142 Ga0070688_100745039
143 Ga0070708_100143601
144 Ga0068867_101135890
145 Ga0070707_100510996
146 Ga0070665_100048035
147 Ga0068857_100282089
148 Ga0068856_100114940
149 Ga0068859_101576323
150 Ga0068866_10650266
151 Ga0068863_100259027
152 Ga0068860_100110440
153 Ga0068860_101330584
154 Ga0081539_10026842
155 Ga0097621_100534698
156 Ga0068865_100241418
157 Ga0068865_100843781
158 Ga0097620_101576447
159 Ga0105240_10000160
160 Ga0105245_11982005
161 Ga0114129_10129715
162 Ga0105241_10111620
163 Ga0105248_10213399
164 Ga0105237_10000028
165 Ga0105238_10017190
166 Ga0157374_10053709
167 Ga0157372_10844310
168 Ga0157375_10219930
169 Ga0157380_10392668
170 Ga0157379_10654662
171 Ga0182007_10107282
172 Ga0209258_108407
173 Ga0207642_10109519
174 Ga0207695_10000027
175 Ga0207671_10008118
176 Ga0207646_10590457
177 Ga0207686_10572274
178 Ga0207704_10218771
179 Ga0207651_10426700
180 Ga0207668_10439284
181 Ga0207641_10577657
182 Ga0207674_10560014
183 Ga0268264_10465948
184 Ga0307515_10223992
185 Ga0307513_10224791
186 Ga0307509_10041406
187 Ga0307509_10129847
188 Ga0307408_100007798
189 Ga0307408_100016951
190 Ga0307508_10001613
191 Ga0307412_10004806
192 Ga0307416_100082484
193 Ga0307414_10607052
194 Ga0373936_0337411
195 Ga0373931_0083974
196 Ga0373927_0878095
197 Ga0395899_0044033
198 Ga0395899_0191099
199 Ga0395905_0046001
200 Ga0395901_0025339
201 Ga0439436_0070858
202 Ga0439436_0196913
203 Ga0439439_0014477
204 Ga0451791_1413494
205 Ga0451800_1299237
206 Ga0451804_1093970
207 Ga0439457_001395
208 Ga0451577_0019463
209 Ga0451577_0439701
210 Ga0466969_0001622
211 Ga0466972_0010582
212 Ga0453683_0023889
213 Ga0453683_0095826
214 Ga0453683_0393138
215 Ga0466966_0000091
216 Ga0453684_0419952
217 Ga0453684_0666596
218 Ga0466957_0000530
219 Ga0466957_0021586
220 Ga0466959_0000002
221 Ga0451576_0002312
222 Ga0451576_0132206
223 Ga0451576_0452031
224 Ga0495638_0189366
225 Ga0495638_0504721
226 Ga0495609_0228990
227 Ga0495625_0093480
228 Ga0495686_0056964
229 Ga0495686_0324805
230 Ga0501032_0005292
231 Ga0501033_0000610
232 Ga0501034_0000172
233 Ga0501034_0311416
234 Ga0501036_0003876
235 Ga0501037_0006523
236 Ga0501038_0030830
237 Ga0501039_0000906
238 Ga0501043_0004436
239 Ga0501047_0015973
240 Ga0501047_0091133
241 Ga0501048_0083037
242 Ga0501257_006923
243 Ga0501225_0000064
244 Ga0501035_0002297
245 Ga0501044_0000801
246 Ga0501044_0001010
247 Ga0501045_0001691
248 nmdc:mga0k408_351597_c1
249 nmdc:mga0k408_689599_c1
250 nmdc:mga05p37_345966_c1
251 nmdc:mga0n895_297196_c1
252 Ga0500578_0000034
253 Ga0500646_0024904
254 Ga0500583_0000063
255 Ga0500583_0000494
256 Ga0500651_0340537
257 Ga0500553_089242
258 Ga0500593_180127
259 Ga0500642_0163033
260 Ga0500655_032165
261 Ga0500561_0096159
262 Ga0500573_0255651
263 Ga0500588_0054099
264 Ga0500589_089578
265 Ga0500603_026257
266 Ga0500604_0033178
267 Ga0500616_0041235
268 Ga0500622_0119419
269 Ga0500636_0285153
270 Ga0500570_194408
271 Ga0500587_017532
272 2738727158

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09349

OHCU_decarbox

OHCU decarboxylase

34

190

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2q37-assembly1.cif.gz_A-2 crystal structure of ohcu decarboxylase in the presence of (s)-allantoin 0.9181 21 156
3o7k-assembly1.cif.gz_A crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase from klebsiella pneumoniae 0.8977 2 157
3o7k-assembly1.cif.gz_A crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase from klebsiella pneumoniae 0.8795 2 157
3o7i-assembly2.cif.gz_B crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase from klebsiella pneumoniae 0.8664 2 157
3o7j-assembly1.cif.gz_A crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase from klebsiella pneumoniae 0.8657 2 157
ID Description Score Start End Superfamily
af_I1MM35_6_163_1.10.3330.10 Mainly Alpha;Orthogonal Bundle;UraD-like;Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.9075 17 157 1.10.3330.10
2q37A00 Mainly Alpha;Orthogonal Bundle;UraD-like;Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.8932 21 156 1.10.3330.10
3o7iB00 Mainly Alpha;Orthogonal Bundle;UraD-like;Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.8664 2 157 1.10.3330.10
3o7jA00 Mainly Alpha;Orthogonal Bundle;UraD-like;Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.8657 2 157 1.10.3330.10
2o70F00 Mainly Alpha;Orthogonal Bundle;UraD-like;Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase 0.8651 3 156 1.10.3330.10
ID Description Score Start End GO Terms
AF-A0A1B6NV51-F1-model_v4 Uricase-like protein 0.9812 3 72 GO:0006144
AF-A0A1B6NV51-F1-model_v4 Uricase-like protein 0.9677 3 72 GO:0006144
AF-A0A482UTH9-F1-model_v4 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase domain-containing protein 0.9676 5 74 GO:0006144
AF-C6AR11-F1-model_v4 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (EC 4.1.1.97) 0.9644 3 157 GO:0005777
GO:0006144
GO:0019628
GO:0051997
AF-A0A2D7FVC2-F1-model_v4 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase (EC 4.1.1.97) 0.9552 1 154 GO:0005777
GO:0006144
GO:0019628
GO:0051997

Map