F164496

General Info

Members Datasets Scaffolds Average Seq Length
135 116 270 327

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0013898|Ga0496108_0013898_1574_2632
Length 352
Sequence MKDQVTDRFPTKGALVPAAITEDRSIRWGIIGAGGIADTVCRDINLTAGNVVVAVAARDAGRAAQFATRHGATRSYSSYESLVADPEVDVVYVATTHPNHEPHALLAIEAGKSVLIEKPVGLNAAQARRVFAAAGKADVFAMEAMWMRTNPLIRRAGELIADGAIGELRGVRMEFGLGIPFDPRHRLYDINNGGGALLDLGVYPASFAFHYLGAPDELLVYGELAPTGVDDTVAMEWLYAGVPRAQLWCSVSSAAPNEAAVFGTTGWITFAAPALRPSGLTVQSGGTNYRVADPIAGQGTGYGPEIEEVERCVRAGITESPLVPHADTIAILELLDQARAGLGVVYPGEAVQ

Samples

Sample ID Description Type Environment
1 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
16 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
17 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
31 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
32 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
54 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
55 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
56 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
62 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
63 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
64 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
65 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
66 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
70 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
71 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
72 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
73 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
74 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
75 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
76 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
79 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
80 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
81 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
82 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
86 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
89 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
90 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
91 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
92 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
93 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
94 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
95 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
96 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
97 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
98 2858868258 Micromonospora sp. MH33 Isolate Unclassified
99 2858882152 Micromonospora noduli MED15 Isolate Nodule
100 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
101 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
102 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
103 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
104 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
105 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
106 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
107 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
108 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
109 2902582711 Micromonospora sp. AP08 Isolate Unclassified
110 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
111 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
112 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
113 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
114 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
115 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
116 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.74
Metatranscriptomes 0
Isolates 19.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.7
Nodule 3.7
Rhizoplane 6.67
Rhizosphere 64.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496108_0013898 3300048911 Bacteria 6567
2 JGI24735J21928_10017717 3300002067 Bacteria 2201
3 Ga0070666_10032895 3300005335 Bacteria 3428
4 Ga0070668_100047310 3300005347 Bacteria 3307
5 Ga0070671_100009197 3300005355 Bacteria 7935
6 Ga0070667_100002139 3300005367 Bacteria 17394
7 Ga0070714_100000906 3300005435 Bacteria 20969
8 Ga0070700_100000077 3300005441 Bacteria 66494
9 Ga0070681_10288804 3300005458 Bacteria 1550
10 Ga0070665_100022631 3300005548 Bacteria 6328
11 Ga0068859_100006460 3300005617 Bacteria 11892
12 Ga0068863_100000263 3300005841 Bacteria 54959
13 Ga0068858_100071511 3300005842 Bacteria 3218
14 Ga0068860_100000067 3300005843 Bacteria 180176
15 Ga0075369_10058397 3300006186 Bacteria 1680
16 Ga0075428_100045451 3300006844 Bacteria 4825
17 Ga0075430_100048418 3300006846 Bacteria 3589
18 Ga0075431_100019128 3300006847 Bacteria 6979
19 Ga0075429_100051586 3300006880 Bacteria 3579
20 Ga0075429_100120595 3300006880 Bacteria 2292
21 Ga0097620_100006460 3300006931 Bacteria 11892
22 Ga0105240_10067024 3300009093 Bacteria 4451
23 Ga0105245_10156443 3300009098 Bacteria 2159
24 Ga0105247_10006972 3300009101 Bacteria 6958
25 Ga0114129_10001766 3300009147 Bacteria 29481
26 Ga0105248_10246384 3300009177 Bacteria 2011
27 Ga0105237_10070805 3300009545 Bacteria 3483
28 Ga0105237_10075116 3300009545 Bacteria 3371
29 Ga0105249_10089713 3300009553 Bacteria 2873
30 Ga0105239_10358338 3300010375 Bacteria 1647
31 Ga0157372_10000373 3300013307 Bacteria 49502
32 Ga0182008_10115261 3300014497 Bacteria 1333
33 Ga0157379_10008148 3300014968 Bacteria 9102
34 Ga0207710_10002181 3300025900 Bacteria 9199
35 Ga0207680_10020584 3300025903 Bacteria 3555
36 Ga0207647_10123601 3300025904 Bacteria 1524
37 Ga0207695_10102266 3300025913 Bacteria 2858
38 Ga0207671_10206021 3300025914 Bacteria 1537
39 Ga0207663_10290650 3300025916 Bacteria 1217
40 Ga0207694_10188623 3300025924 Bacteria 1674
41 Ga0207687_10119397 3300025927 Bacteria 1969
42 Ga0207664_10000002 3300025929 Bacteria 657053
43 Ga0207644_10022727 3300025931 Bacteria 4287
44 Ga0207667_10017723 3300025949 Bacteria 8010
45 Ga0207712_10203773 3300025961 Bacteria 1570
46 Ga0207668_10063748 3300025972 Bacteria 2601
47 Ga0207658_10013844 3300025986 Bacteria 5519
48 Ga0207703_10053711 3300026035 Bacteria 3275
49 Ga0207708_10000032 3300026075 Bacteria 153949
50 Ga0207641_10002599 3300026088 Bacteria 16574
51 Ga0268266_10007116 3300028379 Bacteria 10147
52 Ga0268264_10000114 3300028381 Bacteria 203211
53 Ga0307517_10221025 3300028786 Bacteria 1151
54 Ga0265338_10094366 3300028800 Bacteria 2462
55 Ga0265340_10000537 3300031247 Bacteria 20931
56 Ga0265340_10004246 3300031247 Bacteria 8030
57 Ga0265327_10000107 3300031251 Bacteria 183770
58 Ga0307513_10001986 3300031456 Bacteria 28948
59 Ga0307513_10304179 3300031456 Bacteria 1360
60 Ga0436364_0833000 3300037853 Bacteria 1941
61 Ga0466972_0022923 3300044658 Bacteria 3107
62 Ga0466966_0011716 3300044684 Bacteria 5814
63 Ga0466966_0110704 3300044684 Bacteria 1693
64 Ga0466961_0014823 3300044693 Bacteria 5009
65 Ga0466961_0022452 3300044693 Bacteria 4059
66 Ga0466961_0078052 3300044693 Bacteria 2097
67 Ga0466963_0057832 3300044694 Bacteria 2583
68 Ga0466963_0079405 3300044694 Bacteria 2220
69 Ga0466971_0029699 3300044719 Bacteria 2445
70 Ga0466970_0013226 3300044765 Bacteria 4230
71 Ga0466970_0014822 3300044765 Bacteria 4006
72 Ga0466957_0026087 3300044842 Bacteria 3465
73 Ga0466957_0237433 3300044842 Bacteria 1209
74 Ga0466960_0132603 3300044901 Bacteria 1316
75 Ga0466959_0035201 3300045049 Bacteria 3705
76 Ga0466958_0006833 3300045836 Bacteria 6239
77 Ga0466958_0022257 3300045836 Bacteria 3711
78 Ga0466958_0185459 3300045836 Bacteria 1321
79 Ga0466967_0021218 3300045976 Bacteria 5269
80 Ga0466967_0050736 3300045976 Bacteria 3634
81 Ga0495629_0338969 3300046459 Bacteria 1027
82 Ga0495640_0119265 3300046533 Bacteria 1717
83 Ga0495613_0219038 3300046689 Bacteria 1337
84 Ga0495680_0262569 3300047322 Bacteria 1221
85 Ga0496102_0006658 3300048905 Bacteria 9876
86 Ga0496102_0020916 3300048905 Bacteria 5784
87 Ga0496103_0001429 3300048906 Bacteria 16013
88 Ga0496103_0022379 3300048906 Bacteria 3806
89 Ga0496104_0267265 3300048907 Bacteria 1623
90 Ga0496113_0020743 3300048916 Bacteria 4626
91 Ga0496114_0098128 3300048917 Bacteria 2497
92 Ga0496115_0043466 3300048918 Bacteria 3584
93 Ga0496116_0152164 3300048919 Bacteria 1283
94 Ga0496117_0017202 3300048920 Bacteria 6051
95 Ga0496119_0000159 3300048922 Bacteria 93750
96 Ga0496119_0022884 3300048922 Bacteria 4453
97 Ga0496120_0037529 3300048923 Bacteria 2874
98 Ga0496126_0122183 3300048929 Bacteria 2257
99 Ga0501044_0300025 3300049823 Bacteria 1536
100 nmdc:mga00v17_220621_c1 3300050491 Bacteria 1227
101 nmdc:mga05p37_34436_c1 3300050507 Bacteria 6204
102 nmdc:mga09592_23951_c1 3300050508 Bacteria 5047
103 nmdc:mga0qj67_53491_c1 3300050509 Bacteria 3197
104 nmdc:mga0sz30_6386_c1 3300050516 Bacteria 4375
105 Ga0500616_0000755 3300053153 Bacteria 37233
106 Ga0500616_0022113 3300053153 Bacteria 3555
107 Ga0466962_0004066 3300061719 Bacteria 7002
108 Ga0466962_0072832 3300061719 Bacteria 1641
109 Ga0466962_0157297 3300061719 Bacteria 1104
110 2772645441 2772190715 Bacteria 6959372
111 2831937148 2831935698 Bacteria 5963223
112 2832010151 2832004796 Bacteria 6538017
113 2855674856 2855670206 Bacteria 7120389
114 2855679411 2855676851 Bacteria 7063653
115 2857290179 2857288857 Bacteria 7189066
116 2858850103 2858848962 Bacteria 6963058
117 2858873377 2858868258 Bacteria 7683772
118 2858885593 2858882152 Bacteria 7230291
119 2858892062 2858888857 Bacteria 7060307
120 2858900215 2858895516 Bacteria 7378898
121 2866065826 2866065130 Bacteria 6518152
122 2867510682 2867507094 Bacteria 6506033
123 2869054978 2869048445 Bacteria 6875584
124 2869063592 2869061728 Bacteria 7112407
125 2869073467 2869068681 Bacteria 7205615
126 2880494961 2880489317 Bacteria 7096270
127 2880497371 2880495981 Bacteria 7340502
128 2902584621 2902582711 Bacteria 6187705
129 2929225932 2929219909 Bacteria 6984360
130 2929232593 2929226422 Bacteria 7248583
131 8003833288 8003830390 Bacteria 6541657
132 8003877486 8003870546 Bacteria 7396674
133 8054704315 8054704163 Bacteria 7247792
134 8054731595 8054727385 Bacteria 7558670
135 8054739961 8054734606 Bacteria 6947278
136 Ga0496108_0013898
137 JGI24735J21928_10017717
138 Ga0070666_10032895
139 Ga0070668_100047310
140 Ga0070671_100009197
141 Ga0070667_100002139
142 Ga0070714_100000906
143 Ga0070700_100000077
144 Ga0070681_10288804
145 Ga0070665_100022631
146 Ga0068859_100006460
147 Ga0068863_100000263
148 Ga0068858_100071511
149 Ga0068860_100000067
150 Ga0075369_10058397
151 Ga0075428_100045451
152 Ga0075430_100048418
153 Ga0075431_100019128
154 Ga0075429_100051586
155 Ga0075429_100120595
156 Ga0097620_100006460
157 Ga0105240_10067024
158 Ga0105245_10156443
159 Ga0105247_10006972
160 Ga0114129_10001766
161 Ga0105248_10246384
162 Ga0105237_10070805
163 Ga0105237_10075116
164 Ga0105249_10089713
165 Ga0105239_10358338
166 Ga0157372_10000373
167 Ga0182008_10115261
168 Ga0157379_10008148
169 Ga0207710_10002181
170 Ga0207680_10020584
171 Ga0207647_10123601
172 Ga0207695_10102266
173 Ga0207671_10206021
174 Ga0207663_10290650
175 Ga0207694_10188623
176 Ga0207687_10119397
177 Ga0207664_10000002
178 Ga0207644_10022727
179 Ga0207667_10017723
180 Ga0207712_10203773
181 Ga0207668_10063748
182 Ga0207658_10013844
183 Ga0207703_10053711
184 Ga0207708_10000032
185 Ga0207641_10002599
186 Ga0268266_10007116
187 Ga0268264_10000114
188 Ga0307517_10221025
189 Ga0265338_10094366
190 Ga0265340_10000537
191 Ga0265340_10004246
192 Ga0265327_10000107
193 Ga0307513_10001986
194 Ga0307513_10304179
195 Ga0436364_0833000
196 Ga0466972_0022923
197 Ga0466966_0011716
198 Ga0466966_0110704
199 Ga0466961_0014823
200 Ga0466961_0022452
201 Ga0466961_0078052
202 Ga0466963_0057832
203 Ga0466963_0079405
204 Ga0466971_0029699
205 Ga0466970_0013226
206 Ga0466970_0014822
207 Ga0466957_0026087
208 Ga0466957_0237433
209 Ga0466960_0132603
210 Ga0466959_0035201
211 Ga0466958_0006833
212 Ga0466958_0022257
213 Ga0466958_0185459
214 Ga0466967_0021218
215 Ga0466967_0050736
216 Ga0495629_0338969
217 Ga0495640_0119265
218 Ga0495613_0219038
219 Ga0495680_0262569
220 Ga0496102_0006658
221 Ga0496102_0020916
222 Ga0496103_0001429
223 Ga0496103_0022379
224 Ga0496104_0267265
225 Ga0496113_0020743
226 Ga0496114_0098128
227 Ga0496115_0043466
228 Ga0496116_0152164
229 Ga0496117_0017202
230 Ga0496119_0000159
231 Ga0496119_0022884
232 Ga0496120_0037529
233 Ga0496126_0122183
234 Ga0501044_0300025
235 nmdc:mga00v17_220621_c1
236 nmdc:mga05p37_34436_c1
237 nmdc:mga09592_23951_c1
238 nmdc:mga0qj67_53491_c1
239 nmdc:mga0sz30_6386_c1
240 Ga0500616_0000755
241 Ga0500616_0022113
242 Ga0466962_0004066
243 Ga0466962_0072832
244 Ga0466962_0157297
245 2772645441
246 2831937148
247 2832010151
248 2855674856
249 2855679411
250 2857290179
251 2858850103
252 2858873377
253 2858885593
254 2858892062
255 2858900215
256 2866065826
257 2867510682
258 2869054978
259 2869063592
260 2869073467
261 2880494961
262 2880497371
263 2902584621
264 2929225932
265 2929232593
266 8003833288
267 8003877486
268 8054704315
269 8054731595
270 8054739961

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01408

GFO_IDH_MocA

Oxidoreductase family, NAD-binding Rossmann fold

26

145

0.97

PF22725

GFO_IDH_MocA_C3

GFO/IDH/MocA C-terminal domain

153

269

0.94

PF03447

NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

32

142

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e9m-assembly2.cif.gz_C-2 crystal structure of an oxidoreductase from enterococcus faecalis 0.9516 6 321
3e9m-assembly2.cif.gz_C-2 crystal structure of an oxidoreductase from enterococcus faecalis 0.9371 6 321
3evn-assembly1.cif.gz_A crystal structure of putative oxidoreductase from streptococcus agalactiae 2603v/r 0.9324 7 323
2o48-assembly1.cif.gz_X crystal structure of mammalian dimeric dihydrodiol dehydrogenase 0.9321 7 329
4had-assembly1.cif.gz_D crystal structure of probable oxidoreductase protein from rhizobium etli cfn 42 0.9204 5 325
ID Description Score Start End Superfamily
af_D4A903_1_122_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9869 6 124 3.40.50.720
af_M9PE54_6_126_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9816 7 124 3.40.50.720
af_Q9VJH7_91_211_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9795 7 124 3.40.50.720
3e9mA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9681 5 122 3.40.50.720
af_Q9UT60_9_157_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9593 7 141 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2W4IVS3-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9869 18 330 GO:0000166
GO:0016491
AF-A0A6B0WLV2-F1-model_v4 Gfo/Idh/MocA family oxidoreductase 0.9787 5 325 GO:0000166
GO:0016491
AF-A0A1V5TLY6-F1-model_v4 1,5-anhydro-D-fructose reductase (EC 1.1.1.292) 0.9767 5 331 GO:0000166
GO:0033712
AF-A0A4P5T729-F1-model_v4 Dehydrogenase 0.9754 6 327 GO:0000166
GO:0016491
AF-A0A351MHT5-F1-model_v4 Dehydrogenase 0.9744 1 132 GO:0000166
GO:0016491

Map