F164180
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 135 | 110 | 270 | 389 |
Family's Representative Sequence
| Representative Sequence | 3300044693|Ga0466961_0030716|Ga0466961_0030716_1114_2358 |
| Length | 414 |
| Sequence | MAVFRRPDETRRVIARREEGLRLAVEGGAPVREKLLPYGRQSIDDDDVAAVVAVLRSDWLTTGPKVGEFEEAFAHRVGAAYAVAFSSGTAALHGAVFAADVGTGDEVVTSPLTFCSTANMVLLQGGTPVFADVSEDTMCLHPDLAEQALTRRSRALLPVDYAGHPAHLAAFRELADRRGLILIEDACHALGASFADRPVGSVADLTVFSFHPVKHITTGEGGMVTTQDPELARRMRMFRSHGIDSDPRQRQRTGQWHYEMTELGLNYRLPDLMCALGLSQLPKLDANIARRREIAAAYGERLADIAGLQLPTVRPEVGPAWHLYPVRVHGIERETVFRALRAEGIGVNVHYVPVHLHPYYRQRFGYAGGEFPAAEAAYESLISLPMFHGMTDADVADVVEAVRKVVRRYAGEAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 2 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 3 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 4 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 8 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 9 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 12 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 14 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 15 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 16 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 17 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 18 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 19 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 20 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 22 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 23 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 24 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 25 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 33 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 34 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 35 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 36 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 39 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 51 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 52 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 53 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 54 | 3300035111 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 55 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 56 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 57 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 58 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 59 | 3300038735 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 | Metagenome | Unclassified |
| 60 | 3300038742 | Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 | Metagenome | Unclassified |
| 61 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 62 | 3300042001 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 | Metagenome | Rhizosphere |
| 63 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 64 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 65 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 66 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 67 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 68 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 82 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 83 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 84 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 85 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 86 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 87 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 88 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 89 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 91 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 93 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 94 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 95 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 96 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 97 | 2571042143 | Paenibacillus graminis RSA19 | Isolate | Unclassified |
| 98 | 2728368933 | Paenibacillus jilunlii DSM 23019 | Isolate | Rhizosphere |
| 99 | 2932828146 | Bradyrhizobium sp. S3.9.2 | Isolate | Nodule |
| 100 | 2935769743 | Bradyrhizobium sp. LB12.1 | Isolate | Nodule |
| 101 | 2935837841 | Bradyrhizobium sp. RT4b | Isolate | Nodule |
| 102 | 2936340661 | Gottfriedia acidiceleris 1-17 | Isolate | Rhizosphere |
| 103 | 2971403814 | Paenibacillus tritici LMG 29502 | Isolate | Unclassified |
| 104 | 8016603502 | Bradyrhizobium sp. LB7.2 | Isolate | Nodule |
| 105 | 8016613128 | Bradyrhizobium sp. LB7.1 | Isolate | Nodule |
| 106 | 8017057580 | Bradyrhizobium sp. S3.7.6 | Isolate | Nodule |
| 107 | 8019538911 | Bradyrhizobium sp. LB9.1b | Isolate | Nodule |
| 108 | 8022792930 | Bacillus sp. Xin | Isolate | Rhizosphere |
| 109 | 8046991243 | Cohnella rhizosphaerae DSM 28161 | Isolate | Rhizosphere |
| 110 | 8054795415 | Paenibacillus periandrae PM10 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 88.89 |
| Metatranscriptomes | 0 |
| Isolates | 11.11 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.96 |
| Nodule | 5.93 |
| Rhizoplane | 5.19 |
| Rhizosphere | 81.48 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.3 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0466961_0030716 | 3300044693 | Bacteria | 3452 |
| 2 | JGI25151J46595_10001251 | 3300003187 | Bacteria | 18036 |
| 3 | Ga0055532_1000115 | 3300003758 | Bacteria | 85554 |
| 4 | Ga0070658_10005516 | 3300005327 | Bacteria | 10273 |
| 5 | Ga0070658_10087320 | 3300005327 | Bacteria | 2567 |
| 6 | Ga0070658_10130903 | 3300005327 | Bacteria | 2091 |
| 7 | Ga0070659_100042642 | 3300005366 | Unclassified | 3547 |
| 8 | Ga0070708_100004093 | 3300005445 | Bacteria | 11459 |
| 9 | Ga0070707_100011122 | 3300005468 | Bacteria | 8384 |
| 10 | Ga0070697_100009969 | 3300005536 | Bacteria | 7414 |
| 11 | Ga0070672_100003542 | 3300005543 | Bacteria | 10119 |
| 12 | Ga0070665_100220659 | 3300005548 | Bacteria | 1896 |
| 13 | Ga0070665_100248522 | 3300005548 | Bacteria | 1779 |
| 14 | Ga0068855_100284851 | 3300005563 | Unclassified | 1834 |
| 15 | Ga0068855_100286780 | 3300005563 | Bacteria | 1826 |
| 16 | Ga0070664_100158331 | 3300005564 | Unclassified | 2002 |
| 17 | Ga0068856_100012773 | 3300005614 | Bacteria | 8131 |
| 18 | Ga0068852_100211951 | 3300005616 | Bacteria | 1838 |
| 19 | Ga0068859_100000049 | 3300005617 | Bacteria | 137619 |
| 20 | Ga0068863_100117080 | 3300005841 | Bacteria | 2539 |
| 21 | Ga0068863_100243284 | 3300005841 | Bacteria | 1737 |
| 22 | Ga0068858_100000164 | 3300005842 | Bacteria | 70895 |
| 23 | Ga0068860_100004482 | 3300005843 | Bacteria | 14242 |
| 24 | Ga0068860_100125026 | 3300005843 | Bacteria | 2465 |
| 25 | Ga0081539_10000161 | 3300005985 | Bacteria | 156560 |
| 26 | Ga0081539_10023772 | 3300005985 | Bacteria | 4001 |
| 27 | Ga0070717_10017663 | 3300006028 | Bacteria | 5555 |
| 28 | Ga0075428_100002983 | 3300006844 | Bacteria | 18440 |
| 29 | Ga0075431_100003849 | 3300006847 | Bacteria | 14594 |
| 30 | Ga0075431_100014054 | 3300006847 | Bacteria | 8091 |
| 31 | Ga0075431_100018905 | 3300006847 | Bacteria | 7018 |
| 32 | Ga0075429_100025139 | 3300006880 | Bacteria | 5169 |
| 33 | Ga0075429_100035608 | 3300006880 | Bacteria | 4330 |
| 34 | Ga0075436_100026454 | 3300006914 | Bacteria | 3994 |
| 35 | Ga0097620_100000049 | 3300006931 | Bacteria | 137619 |
| 36 | Ga0105250_10007119 | 3300009092 | Bacteria | 4830 |
| 37 | Ga0114129_10000003 | 3300009147 | Bacteria | 183186 |
| 38 | Ga0114129_10102417 | 3300009147 | Bacteria | 3960 |
| 39 | Ga0114129_10122360 | 3300009147 | Unclassified | 3581 |
| 40 | Ga0105248_10000208 | 3300009177 | Bacteria | 67740 |
| 41 | Ga0105248_10412154 | 3300009177 | Bacteria | 1521 |
| 42 | Ga0105237_10192925 | 3300009545 | Bacteria | 2037 |
| 43 | Ga0157373_10060407 | 3300013100 | Bacteria | 2686 |
| 44 | Ga0157371_10087636 | 3300013102 | Unclassified | 2204 |
| 45 | Ga0157369_10149728 | 3300013105 | Bacteria | 2466 |
| 46 | Ga0157369_10330209 | 3300013105 | Bacteria | 1585 |
| 47 | Ga0157374_10006905 | 3300013296 | Bacteria | 9653 |
| 48 | Ga0157374_10022184 | 3300013296 | Bacteria | 5662 |
| 49 | Ga0157378_10301491 | 3300013297 | Bacteria | 1551 |
| 50 | Ga0157372_10098670 | 3300013307 | Unclassified | 3332 |
| 51 | Ga0157372_10368326 | 3300013307 | Unclassified | 1674 |
| 52 | Ga0157372_10498160 | 3300013307 | Bacteria | 1421 |
| 53 | Ga0163163_10199351 | 3300014325 | Bacteria | 2050 |
| 54 | Ga0209147_100088 | 3300025229 | Bacteria | 179728 |
| 55 | Ga0209025_1005028 | 3300025294 | Bacteria | 11040 |
| 56 | Ga0207705_10004754 | 3300025909 | Bacteria | 10228 |
| 57 | Ga0207684_10087657 | 3300025910 | Unclassified | 2652 |
| 58 | Ga0207695_10045505 | 3300025913 | Bacteria | 4658 |
| 59 | Ga0207646_10039483 | 3300025922 | Bacteria | 4249 |
| 60 | Ga0207646_10069417 | 3300025922 | Unclassified | 3147 |
| 61 | Ga0207690_10086746 | 3300025932 | Unclassified | 2200 |
| 62 | Ga0207691_10007914 | 3300025940 | Bacteria | 10231 |
| 63 | Ga0207711_10001390 | 3300025941 | Bacteria | 22772 |
| 64 | Ga0207711_10011823 | 3300025941 | Bacteria | 7253 |
| 65 | Ga0207667_10228034 | 3300025949 | Bacteria | 1908 |
| 66 | Ga0207667_10425064 | 3300025949 | Unclassified | 1351 |
| 67 | Ga0207678_10048262 | 3300026067 | Bacteria | 3681 |
| 68 | Ga0207641_10085858 | 3300026088 | Bacteria | 2743 |
| 69 | Ga0268266_10039791 | 3300028379 | Bacteria | 4005 |
| 70 | Ga0265336_10025526 | 3300028666 | Bacteria | 1861 |
| 71 | Ga0265342_10015664 | 3300031712 | Unclassified | 4980 |
| 72 | Ga0316576_10006784 | 3300031727 | Bacteria | 7155 |
| 73 | Ga0316578_10081066 | 3300031728 | Unclassified | 1931 |
| 74 | Ga0373923_0070128 | 3300035111 | Unclassified | 1504 |
| 75 | Ga0373927_0148719 | 3300035695 | Bacteria | 1534 |
| 76 | Ga0316582_0178726 | 3300036647 | Bacteria | 1443 |
| 77 | Ga0316584_0015501 | 3300036712 | Bacteria | 5452 |
| 78 | Ga0436364_0454655 | 3300037853 | Bacteria | 2810 |
| 79 | Ga0400485_16730 | 3300038735 | Unclassified | 2793 |
| 80 | Ga0400486_24398 | 3300038742 | Unclassified | 2056 |
| 81 | Ga0436360_0483651 | 3300039438 | Bacteria | 1250 |
| 82 | Ga0439441_002076 | 3300042001 | Bacteria | 2759 |
| 83 | Ga0439441_009227 | 3300042001 | Bacteria | 1630 |
| 84 | Ga0451577_0000316 | 3300042876 | Bacteria | 91294 |
| 85 | Ga0466963_0051475 | 3300044694 | Bacteria | 2730 |
| 86 | Ga0466964_0002009 | 3300044706 | Bacteria | 7155 |
| 87 | Ga0453684_0000543 | 3300044712 | Bacteria | 142555 |
| 88 | Ga0453684_0242082 | 3300044712 | Unclassified | 2076 |
| 89 | Ga0466967_0014845 | 3300045976 | Bacteria | 6086 |
| 90 | Ga0495651_0001689 | 3300046462 | Bacteria | 17064 |
| 91 | Ga0495664_0020435 | 3300046477 | Bacteria | 3819 |
| 92 | Ga0495640_0042968 | 3300046533 | Bacteria | 3150 |
| 93 | Ga0495645_0004615 | 3300046543 | Bacteria | 9407 |
| 94 | Ga0495634_0031881 | 3300046642 | Unclassified | 3628 |
| 95 | Ga0495635_0016853 | 3300046663 | Bacteria | 5103 |
| 96 | Ga0495599_0001416 | 3300046678 | Bacteria | 13730 |
| 97 | Ga0495646_0035108 | 3300046680 | Bacteria | 3111 |
| 98 | Ga0495613_0113588 | 3300046689 | Unclassified | 1950 |
| 99 | Ga0495600_0015151 | 3300046809 | Unclassified | 4871 |
| 100 | Ga0495674_0013616 | 3300047319 | Bacteria | 7640 |
| 101 | Ga0495680_0027596 | 3300047322 | Unclassified | 4662 |
| 102 | Ga0495602_0166500 | 3300048088 | Bacteria | 1715 |
| 103 | Ga0496100_0094663 | 3300048903 | Bacteria | 2046 |
| 104 | Ga0496101_0003050 | 3300048904 | Bacteria | 10337 |
| 105 | Ga0496103_0023007 | 3300048906 | Bacteria | 3756 |
| 106 | Ga0496106_0005907 | 3300048909 | Bacteria | 9048 |
| 107 | Ga0496109_0074671 | 3300048912 | Bacteria | 3117 |
| 108 | Ga0496110_0056949 | 3300048913 | Bacteria | 3440 |
| 109 | Ga0496111_0046021 | 3300048914 | Bacteria | 3141 |
| 110 | Ga0501033_0035790 | 3300049570 | Bacteria | 3722 |
| 111 | Ga0501033_0135710 | 3300049570 | Bacteria | 1780 |
| 112 | Ga0501033_0142761 | 3300049570 | Bacteria | 1731 |
| 113 | Ga0501083_0000084 | 3300049744 | Bacteria | 63937 |
| 114 | Ga0501035_0004499 | 3300049822 | Bacteria | 13229 |
| 115 | Ga0501044_0041253 | 3300049823 | Bacteria | 4805 |
| 116 | nmdc:mga05p37_279_c1 | 3300050507 | Bacteria | 53447 |
| 117 | nmdc:mga09592_50951_c1 | 3300050508 | Bacteria | 3492 |
| 118 | nmdc:mga06r32_625_c1 | 3300050510 | Bacteria | 30796 |
| 119 | nmdc:mga08x19_12387_c1 | 3300050514 | Bacteria | 5137 |
| 120 | Ga0495601_0079419 | 3300053077 | Unclassified | 2104 |
| 121 | 2571527085 | 2571042143 | Bacteria | 6986194 |
| 122 | 2571531624 | 2571042143 | Bacteria | 6986194 |
| 123 | 2728531913 | 2728368933 | Bacteria | 7044283 |
| 124 | 2932836859 | 2932828146 | Bacteria | 9745859 |
| 125 | 2935774386 | 2935769743 | Bacteria | 7878163 |
| 126 | 2935845075 | 2935837841 | Bacteria | 9454360 |
| 127 | 2936342684 | 2936340661 | Bacteria | 5139038 |
| 128 | 2971407227 | 2971403814 | Bacteria | 7370929 |
| 129 | 8016612568 | 8016603502 | Bacteria | 8731218 |
| 130 | 8016621248 | 8016613128 | Bacteria | 8794220 |
| 131 | 8017060964 | 8017057580 | Bacteria | 10023680 |
| 132 | 8019543056 | 8019538911 | Bacteria | 7872763 |
| 133 | 8022798436 | 8022792930 | Bacteria | 5693794 |
| 134 | 8046997216 | 8046991243 | Bacteria | 8497463 |
| 135 | 8054799096 | 8054795415 | Bacteria | 9785225 |
| 136 | Ga0466961_0030716 | |||
| 137 | JGI25151J46595_10001251 | |||
| 138 | Ga0055532_1000115 | |||
| 139 | Ga0070658_10005516 | |||
| 140 | Ga0070658_10087320 | |||
| 141 | Ga0070658_10130903 | |||
| 142 | Ga0070659_100042642 | |||
| 143 | Ga0070708_100004093 | |||
| 144 | Ga0070707_100011122 | |||
| 145 | Ga0070697_100009969 | |||
| 146 | Ga0070672_100003542 | |||
| 147 | Ga0070665_100220659 | |||
| 148 | Ga0070665_100248522 | |||
| 149 | Ga0068855_100284851 | |||
| 150 | Ga0068855_100286780 | |||
| 151 | Ga0070664_100158331 | |||
| 152 | Ga0068856_100012773 | |||
| 153 | Ga0068852_100211951 | |||
| 154 | Ga0068859_100000049 | |||
| 155 | Ga0068863_100117080 | |||
| 156 | Ga0068863_100243284 | |||
| 157 | Ga0068858_100000164 | |||
| 158 | Ga0068860_100004482 | |||
| 159 | Ga0068860_100125026 | |||
| 160 | Ga0081539_10000161 | |||
| 161 | Ga0081539_10023772 | |||
| 162 | Ga0070717_10017663 | |||
| 163 | Ga0075428_100002983 | |||
| 164 | Ga0075431_100003849 | |||
| 165 | Ga0075431_100014054 | |||
| 166 | Ga0075431_100018905 | |||
| 167 | Ga0075429_100025139 | |||
| 168 | Ga0075429_100035608 | |||
| 169 | Ga0075436_100026454 | |||
| 170 | Ga0097620_100000049 | |||
| 171 | Ga0105250_10007119 | |||
| 172 | Ga0114129_10000003 | |||
| 173 | Ga0114129_10102417 | |||
| 174 | Ga0114129_10122360 | |||
| 175 | Ga0105248_10000208 | |||
| 176 | Ga0105248_10412154 | |||
| 177 | Ga0105237_10192925 | |||
| 178 | Ga0157373_10060407 | |||
| 179 | Ga0157371_10087636 | |||
| 180 | Ga0157369_10149728 | |||
| 181 | Ga0157369_10330209 | |||
| 182 | Ga0157374_10006905 | |||
| 183 | Ga0157374_10022184 | |||
| 184 | Ga0157378_10301491 | |||
| 185 | Ga0157372_10098670 | |||
| 186 | Ga0157372_10368326 | |||
| 187 | Ga0157372_10498160 | |||
| 188 | Ga0163163_10199351 | |||
| 189 | Ga0209147_100088 | |||
| 190 | Ga0209025_1005028 | |||
| 191 | Ga0207705_10004754 | |||
| 192 | Ga0207684_10087657 | |||
| 193 | Ga0207695_10045505 | |||
| 194 | Ga0207646_10039483 | |||
| 195 | Ga0207646_10069417 | |||
| 196 | Ga0207690_10086746 | |||
| 197 | Ga0207691_10007914 | |||
| 198 | Ga0207711_10001390 | |||
| 199 | Ga0207711_10011823 | |||
| 200 | Ga0207667_10228034 | |||
| 201 | Ga0207667_10425064 | |||
| 202 | Ga0207678_10048262 | |||
| 203 | Ga0207641_10085858 | |||
| 204 | Ga0268266_10039791 | |||
| 205 | Ga0265336_10025526 | |||
| 206 | Ga0265342_10015664 | |||
| 207 | Ga0316576_10006784 | |||
| 208 | Ga0316578_10081066 | |||
| 209 | Ga0373923_0070128 | |||
| 210 | Ga0373927_0148719 | |||
| 211 | Ga0316582_0178726 | |||
| 212 | Ga0316584_0015501 | |||
| 213 | Ga0436364_0454655 | |||
| 214 | Ga0400485_16730 | |||
| 215 | Ga0400486_24398 | |||
| 216 | Ga0436360_0483651 | |||
| 217 | Ga0439441_002076 | |||
| 218 | Ga0439441_009227 | |||
| 219 | Ga0451577_0000316 | |||
| 220 | Ga0466963_0051475 | |||
| 221 | Ga0466964_0002009 | |||
| 222 | Ga0453684_0000543 | |||
| 223 | Ga0453684_0242082 | |||
| 224 | Ga0466967_0014845 | |||
| 225 | Ga0495651_0001689 | |||
| 226 | Ga0495664_0020435 | |||
| 227 | Ga0495640_0042968 | |||
| 228 | Ga0495645_0004615 | |||
| 229 | Ga0495634_0031881 | |||
| 230 | Ga0495635_0016853 | |||
| 231 | Ga0495599_0001416 | |||
| 232 | Ga0495646_0035108 | |||
| 233 | Ga0495613_0113588 | |||
| 234 | Ga0495600_0015151 | |||
| 235 | Ga0495674_0013616 | |||
| 236 | Ga0495680_0027596 | |||
| 237 | Ga0495602_0166500 | |||
| 238 | Ga0496100_0094663 | |||
| 239 | Ga0496101_0003050 | |||
| 240 | Ga0496103_0023007 | |||
| 241 | Ga0496106_0005907 | |||
| 242 | Ga0496109_0074671 | |||
| 243 | Ga0496110_0056949 | |||
| 244 | Ga0496111_0046021 | |||
| 245 | Ga0501033_0035790 | |||
| 246 | Ga0501033_0135710 | |||
| 247 | Ga0501033_0142761 | |||
| 248 | Ga0501083_0000084 | |||
| 249 | Ga0501035_0004499 | |||
| 250 | Ga0501044_0041253 | |||
| 251 | nmdc:mga05p37_279_c1 | |||
| 252 | nmdc:mga09592_50951_c1 | |||
| 253 | nmdc:mga06r32_625_c1 | |||
| 254 | nmdc:mga08x19_12387_c1 | |||
| 255 | Ga0495601_0079419 | |||
| 256 | 2571527085 | |||
| 257 | 2571531624 | |||
| 258 | 2728531913 | |||
| 259 | 2932836859 | |||
| 260 | 2935774386 | |||
| 261 | 2935845075 | |||
| 262 | 2936342684 | |||
| 263 | 2971407227 | |||
| 264 | 8016612568 | |||
| 265 | 8016621248 | |||
| 266 | 8017060964 | |||
| 267 | 8019543056 | |||
| 268 | 8022798436 | |||
| 269 | 8046997216 | |||
| 270 | 8054799096 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 8su6-assembly1.cif.gz_B | crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form2) | 0.9719 | 17 | 389 |
| 1mdo-assembly1.cif.gz_A | crystal structure of arnb aminotransferase with pyridomine 5' phosphate | 0.9689 | 17 | 390 |
| 8snj-assembly3.cif.gz_E | crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form) | 0.9687 | 17 | 389 |
| 8snj-assembly1.cif.gz_A | crystal structure of arnb transferase from klebsiella aerogenes (lattice translocation disorder, p1 form) | 0.9667 | 17 | 389 |
| 1mdx-assembly1.cif.gz_A | crystal structure of arnb transferase with pyridoxal 5' phosphate | 0.9647 | 17 | 390 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q58466_257_386_3.90.1150.10 | Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 | 0.9828 | 268 | 394 | 3.90.1150.10 |
| 1mdxA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9721 | 17 | 265 | 3.40.640.10 |
| 1mdxA01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9641 | 17 | 265 | 3.40.640.10 |
| 3bn1B01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9592 | 18 | 264 | 3.40.640.10 |
| 4lc3B01 | Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.9567 | 17 | 264 | 3.40.640.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0G9L6X4-F1-model_v4 | Aminotransferase DegT | 0.9981 | 4 | 395 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A2J0LSW6-F1-model_v4 | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.9944 | 18 | 203 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-X1B8Q7-F1-model_v4 | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | 0.9924 | 18 | 144 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-X1L0T4-F1-model_v4 | Aminotransferase class I/classII domain-containing protein | 0.9919 | 51 | 172 |
GO:0000271
GO:0008483 GO:0030170 |
| AF-A0A0G9L6X4-F1-model_v4 | Aminotransferase DegT | 0.988 | 4 | 395 |
GO:0000271
GO:0008483 GO:0030170 |