F157519

General Info

Members Datasets Scaffolds Average Seq Length
133 101 133 192

Family's Representative Sequence

Representative Sequence 3300046543|Ga0495645_0000183|Ga0495645_0000183_21870_22520
Length 216
Sequence VHRAPATRGSATRGDTPPGALMGLRDILTGRHQVAGPAPDRLFAITTAYIALQSEHSIDPTGVAAIVFQALATSEFEATLRDMEEVVSATSGESGTTASTQDDSYGYRWMVLRNPKGAPSVEDLAVGINAVSSSIETAGHGERLLCAVFAFADAQQRPVYMIYNYKRGHWYPFVPAPGGANERATERELQLKAQMADELPIEPELERWFPLWGIPI

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
11 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
12 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
20 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
25 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
26 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
29 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
30 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
46 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
47 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
52 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
71 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
72 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
73 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
77 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
83 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
88 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
89 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
96 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.5
Metatranscriptomes 1.5
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.77
Rhizosphere 87.97
Stem 0
Stem Tuber 0
Unclassified 5.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10009683 3300003203 Bacteria 4309
2 Ga0070676_10497550 3300005328 Bacteria 865
3 Ga0070680_100576790 3300005336 Bacteria 965
4 Ga0070669_100180935 3300005353 Bacteria 1649
5 Ga0070674_100292864 3300005356 Bacteria 1295
6 Ga0070709_10404403 3300005434 Bacteria 1020
7 Ga0070714_100655457 3300005435 Bacteria 1011
8 Ga0070710_10000008 3300005437 Bacteria 198148
9 Ga0070710_10169694 3300005437 Bacteria 1359
10 Ga0070710_10291284 3300005437 Bacteria 1063
11 Ga0070679_100379419 3300005530 Bacteria 1360
12 Ga0070679_100752831 3300005530 Bacteria 917
13 Ga0070664_100040208 3300005564 Bacteria 3942
14 Ga0068852_100435917 3300005616 Bacteria 1295
15 Ga0068861_100065815 3300005719 Bacteria 2792
16 Ga0081455_10205187 3300005937 Bacteria 1473
17 Ga0081538_10204413 3300005981 Bacteria 806
18 Ga0070712_100245269 3300006175 Bacteria 1429
19 Ga0075434_100362599 3300006871 Bacteria 1470
20 Ga0075435_100463831 3300007076 Bacteria 1093
21 Ga0105245_11075946 3300009098 Bacteria 850
22 Ga0105247_10945318 3300009101 Bacteria 669
23 Ga0105237_10003406 3300009545 Bacteria 18902
24 Ga0105238_10485733 3300009551 Bacteria 1235
25 Ga0163162_10110231 3300013306 Bacteria 2850
26 Ga0157372_10266508 3300013307 Bacteria 1989
27 Ga0157379_10048797 3300014968 Bacteria 3779
28 Ga0163161_10165609 3300017792 Bacteria 1688
29 Ga0206356_11909735 3300020070 Bacteria 1397
30 Ga0206353_11475618 3300020082 Bacteria 1223
31 Ga0213876_10008089 3300021384 Bacteria 5700
32 Ga0213875_10000162 3300021388 Bacteria 70242
33 Ga0207692_10105965 3300025898 Bacteria 1551
34 Ga0207692_10241465 3300025898 Archaea 1079
35 Ga0207699_10135396 3300025906 Bacteria 1612
36 Ga0207645_10113946 3300025907 Bacteria 1752
37 Ga0207643_10175064 3300025908 Bacteria 1297
38 Ga0207671_10005669 3300025914 Bacteria 11415
39 Ga0207693_10073393 3300025915 Bacteria 2678
40 Ga0207693_10239136 3300025915 Bacteria 1426
41 Ga0207663_10000471 3300025916 Bacteria 17478
42 Ga0207663_10339110 3300025916 Bacteria 1135
43 Ga0207694_10785072 3300025924 Bacteria 804
44 Ga0207687_10769508 3300025927 Bacteria 820
45 Ga0207700_10011460 3300025928 Bacteria 5654
46 Ga0207700_10363925 3300025928 Bacteria 1262
47 Ga0207669_10173114 3300025937 Bacteria 1539
48 Ga0207665_10132987 3300025939 Bacteria 1768
49 Ga0207678_10204293 3300026067 Archaea 1690
50 Ga0207708_10074357 3300026075 Bacteria 2604
51 Ga0207675_100026609 3300026118 Bacteria 5386
52 Ga0265337_1002017 3300028556 Bacteria 9640
53 Ga0265326_10000360 3300028558 Bacteria 19131
54 Ga0265319_1000168 3300028563 Bacteria 49448
55 Ga0265319_1042899 3300028563 Bacteria 1521
56 Ga0265319_1061292 3300028563 Bacteria 1220
57 Ga0265319_1120519 3300028563 Bacteria 817
58 Ga0265318_10007776 3300028577 Bacteria 4820
59 Ga0265318_10009050 3300028577 Bacteria 4401
60 Ga0265336_10000001 3300028666 Bacteria 916179
61 Ga0265338_10000228 3300028800 Bacteria 104553
62 Ga0265338_10035397 3300028800 Bacteria 4802
63 Ga0265338_10234049 3300028800 Archaea 1364
64 Ga0265338_10338482 3300028800 Bacteria 1085
65 Ga0265320_10020485 3300031240 Bacteria 3584
66 Ga0265340_10000005 3300031247 Bacteria 204570
67 Ga0265327_10002608 3300031251 Bacteria 18651
68 Ga0265316_10042842 3300031344 Bacteria 3614
69 Ga0265316_10160444 3300031344 Bacteria 1681
70 Ga0265316_10163940 3300031344 Bacteria 1661
71 Ga0265314_10045397 3300031711 Bacteria 3107
72 Ga0265342_10055927 3300031712 Bacteria 2341
73 Ga0307409_100059420 3300031995 Bacteria 2975
74 Ga0307409_101646755 3300031995 Bacteria 670
75 Ga0307416_100403726 3300032002 Bacteria 1405
76 Ga0395900_0272989 3300037418 Bacteria 1685
77 Ga0395900_0299149 3300037418 Bacteria 1596
78 Ga0395898_0103492 3300037466 Bacteria 2732
79 Ga0436364_1082254 3300037853 Bacteria 49536
80 Ga0395901_0060895 3300038443 Bacteria 3928
81 Ga0395901_0185205 3300038443 Bacteria 2184
82 Ga0395901_0433275 3300038443 Bacteria 1347
83 Ga0395901_0772191 3300038443 Bacteria 952
84 Ga0395901_0778697 3300038443 Bacteria 947
85 Ga0436365_0262453 3300039437 Bacteria 28030
86 Ga0436362_0925347 3300039453 Bacteria 2541
87 Ga0466963_0216123 3300044694 Bacteria 1342
88 Ga0466957_0604145 3300044842 Bacteria 768
89 Ga0466960_0000044 3300044901 Bacteria 40726
90 Ga0466960_0011927 3300044901 Bacteria 3656
91 Ga0466960_0036488 3300044901 Bacteria 2302
92 Ga0466960_0170746 3300044901 Bacteria 1173
93 Ga0466960_0228782 3300044901 Bacteria 1026
94 Ga0466967_0034190 3300045976 Bacteria 4312
95 Ga0495651_0067246 3300046462 Bacteria 2734
96 Ga0495650_0000035 3300046471 Bacteria 403799
97 Ga0495664_0210360 3300046477 Bacteria 1178
98 Ga0495596_0041943 3300046500 Bacteria 1804
99 Ga0495630_0000304 3300046517 Bacteria 39460
100 Ga0495630_0018438 3300046517 Bacteria 5127
101 Ga0495645_0000183 3300046543 Bacteria 44390
102 Ga0495667_0217391 3300046559 Bacteria 1220
103 Ga0495657_0000006 3300046675 Bacteria 250610
104 Ga0495604_0002449 3300047317 Bacteria 14842
105 Ga0495604_0129586 3300047317 Bacteria 1815
106 Ga0495674_0974621 3300047319 Bacteria 651
107 Ga0495680_0161334 3300047322 Bacteria 1628
108 Ga0495679_080156 3300047446 Bacteria 928
109 Ga0495684_0001764 3300047471 Bacteria 17376
110 Ga0495684_0017420 3300047471 Bacteria 5531
111 Ga0495602_0206871 3300048088 Unclassified 1493
112 Ga0496101_0678821 3300048904 Bacteria 814
113 Ga0496102_1002643 3300048905 Bacteria 756
114 Ga0496103_0011326 3300048906 Bacteria 5281
115 Ga0496110_0011705 3300048913 Bacteria 7196
116 Ga0496111_0000130 3300048914 Bacteria 33124
117 Ga0496112_0003942 3300048915 Bacteria 12429
118 Ga0496113_0083622 3300048916 Bacteria 2449
119 Ga0496115_0018141 3300048918 Bacteria 5395
120 Ga0496115_0026637 3300048918 Bacteria 4514
121 Ga0496119_0124285 3300048922 Bacteria 1414
122 Ga0496121_0013353 3300048924 Bacteria 8835
123 Ga0496122_0124066 3300048925 Bacteria 1658
124 Ga0501034_0361389 3300049571 Bacteria 1379
125 Ga0501069_0900839 3300049585 Bacteria 538
126 Ga0501071_1039783 3300049587 Bacteria 633
127 nmdc:mga0n895_423165_c1 3300050512 Bacteria 1346
128 nmdc:mga0rr50_191527_c1 3300050513 Bacteria 1676
129 Ga0495601_0002759 3300053077 Bacteria 9973
130 Ga0495601_0004235 3300053077 Bacteria 8284
131 Ga0495601_0671978 3300053077 Bacteria 662
132 Ga0495612_0000059 3300053078 Bacteria 49421
133 Ga0495619_0089322 3300053085 Bacteria 2085

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049585 Ga0501069_0900839 Ga0501069_0900839_45_527 160
2 3300026067 Ga0207678_10204293 Ga0207678_102042931 161
3 3300025916 Ga0207663_10000471 Ga0207663_1000047114 166
4 3300053078 Ga0495612_0000059 Ga0495612_0000059_13233_13820 177
5 3300048918 Ga0496115_0026637 Ga0496115_0026637_1090_1677 178
6 3300005564 Ga0070664_100040208 Ga0070664_1000402082 179
7 3300048906 Ga0496103_0011326 Ga0496103_0011326_621_1208 179
8 3300048925 Ga0496122_0124066 Ga0496122_0124066_87_674 179
9 3300048918 Ga0496115_0018141 Ga0496115_0018141_1910_2497 181
10 3300046471 Ga0495650_0000035 Ga0495650_0000035_55061_55633 183
11 3300028800 Ga0265338_10234049 Ga0265338_102340492 184
12 3300020070 Ga0206356_11909735 Ga0206356_119097352 185
13 3300038443 Ga0395901_0433275 Ga0395901_0433275_205_768 187
14 3300006871 Ga0075434_100362599 Ga0075434_1003625993 188
15 3300007076 Ga0075435_100463831 Ga0075435_1004638312 188
16 3300050512 nmdc:mga0n895_423165_c1 nmdc:mga0n895_423165_c1_557_1168 188
17 3300050513 nmdc:mga0rr50_191527_c1 nmdc:mga0rr50_191527_c1_367_978 188
18 3300005437 Ga0070710_10000008 Ga0070710_10000008142 189
19 3300020082 Ga0206353_11475618 Ga0206353_114756182 189
20 3300028800 Ga0265338_10338482 Ga0265338_103384821 189
21 3300031995 Ga0307409_101646755 Ga0307409_1016467551 189
22 3300032002 Ga0307416_100403726 Ga0307416_1004037262 189
23 3300045976 Ga0466967_0034190 Ga0466967_0034190_38_610 189
24 3300053077 Ga0495601_0671978 Ga0495601_0671978_33_605 189
25 3300003203 JGI25406J46586_10009683 JGI25406J46586_100096834 190
26 3300005328 Ga0070676_10497550 Ga0070676_104975501 190
27 3300005336 Ga0070680_100576790 Ga0070680_1005767901 190
28 3300005353 Ga0070669_100180935 Ga0070669_1001809351 190
29 3300005356 Ga0070674_100292864 Ga0070674_1002928642 190
30 3300005434 Ga0070709_10404403 Ga0070709_104044032 190
31 3300005435 Ga0070714_100655457 Ga0070714_1006554572 190
32 3300005437 Ga0070710_10169694 Ga0070710_101696942 190
33 3300005437 Ga0070710_10291284 Ga0070710_102912841 190
34 3300005530 Ga0070679_100379419 Ga0070679_1003794192 190
35 3300005530 Ga0070679_100752831 Ga0070679_1007528311 190
36 3300005616 Ga0068852_100435917 Ga0068852_1004359172 190
37 3300005719 Ga0068861_100065815 Ga0068861_1000658153 190
38 3300005937 Ga0081455_10205187 Ga0081455_102051872 190
39 3300005981 Ga0081538_10204413 Ga0081538_102044131 190
40 3300006175 Ga0070712_100245269 Ga0070712_1002452692 190
41 3300009098 Ga0105245_11075946 Ga0105245_110759462 190
42 3300009101 Ga0105247_10945318 Ga0105247_109453181 190
43 3300009545 Ga0105237_10003406 Ga0105237_1000340614 190
44 3300009551 Ga0105238_10485733 Ga0105238_104857331 190
45 3300013306 Ga0163162_10110231 Ga0163162_101102313 190
46 3300013307 Ga0157372_10266508 Ga0157372_102665081 190
47 3300014968 Ga0157379_10048797 Ga0157379_100487973 190
48 3300017792 Ga0163161_10165609 Ga0163161_101656092 190
49 3300021384 Ga0213876_10008089 Ga0213876_100080894 190
50 3300021388 Ga0213875_10000162 Ga0213875_1000016249 190
51 3300025898 Ga0207692_10105965 Ga0207692_101059653 190
52 3300025898 Ga0207692_10241465 Ga0207692_102414652 190
53 3300025906 Ga0207699_10135396 Ga0207699_101353962 190
54 3300025907 Ga0207645_10113946 Ga0207645_101139462 190
55 3300025908 Ga0207643_10175064 Ga0207643_101750642 190
56 3300025914 Ga0207671_10005669 Ga0207671_1000566910 190
57 3300025915 Ga0207693_10073393 Ga0207693_100733933 190
58 3300025915 Ga0207693_10239136 Ga0207693_102391362 190
59 3300025916 Ga0207663_10339110 Ga0207663_103391102 190
60 3300025924 Ga0207694_10785072 Ga0207694_107850721 190
61 3300025927 Ga0207687_10769508 Ga0207687_107695081 190
62 3300025928 Ga0207700_10011460 Ga0207700_100114605 190
63 3300025928 Ga0207700_10363925 Ga0207700_103639252 190
64 3300025937 Ga0207669_10173114 Ga0207669_101731141 190
65 3300025939 Ga0207665_10132987 Ga0207665_101329872 190
66 3300026075 Ga0207708_10074357 Ga0207708_100743572 190
67 3300026118 Ga0207675_100026609 Ga0207675_1000266095 190
68 3300028556 Ga0265337_1002017 Ga0265337_100201713 190
69 3300028558 Ga0265326_10000360 Ga0265326_1000036014 190
70 3300028563 Ga0265319_1000168 Ga0265319_10001682 190
71 3300028563 Ga0265319_1042899 Ga0265319_10428992 190
72 3300028563 Ga0265319_1061292 Ga0265319_10612922 190
73 3300028563 Ga0265319_1120519 Ga0265319_11205192 190
74 3300028577 Ga0265318_10007776 Ga0265318_100077761 190
75 3300028577 Ga0265318_10009050 Ga0265318_100090508 190
76 3300028666 Ga0265336_10000001 Ga0265336_1000000137 190
77 3300028800 Ga0265338_10000228 Ga0265338_1000022877 190
78 3300028800 Ga0265338_10035397 Ga0265338_100353971 190
79 3300031240 Ga0265320_10020485 Ga0265320_100204853 190
80 3300031247 Ga0265340_10000005 Ga0265340_1000000537 190
81 3300031251 Ga0265327_10002608 Ga0265327_1000260813 190
82 3300031344 Ga0265316_10042842 Ga0265316_100428424 190
83 3300031344 Ga0265316_10160444 Ga0265316_101604441 190
84 3300031344 Ga0265316_10163940 Ga0265316_101639402 190
85 3300031711 Ga0265314_10045397 Ga0265314_100453971 190
86 3300031712 Ga0265342_10055927 Ga0265342_100559273 190
87 3300031995 Ga0307409_100059420 Ga0307409_1000594203 190
88 3300037418 Ga0395900_0272989 Ga0395900_0272989_964_1536 190
89 3300037418 Ga0395900_0299149 Ga0395900_0299149_571_1143 190
90 3300037466 Ga0395898_0103492 Ga0395898_0103492_1920_2492 190
91 3300037853 Ga0436364_1082254 Ga0436364_1082254_9873_10454 190
92 3300038443 Ga0395901_0060895 Ga0395901_0060895_218_790 190
93 3300038443 Ga0395901_0185205 Ga0395901_0185205_229_801 190
94 3300038443 Ga0395901_0772191 Ga0395901_0772191_357_932 190
95 3300038443 Ga0395901_0778697 Ga0395901_0778697_10_582 190
96 3300039437 Ga0436365_0262453 Ga0436365_0262453_10450_11022 190
97 3300039453 Ga0436362_0925347 Ga0436362_0925347_751_1323 190
98 3300044694 Ga0466963_0216123 Ga0466963_0216123_318_890 190
99 3300044842 Ga0466957_0604145 Ga0466957_0604145_182_754 190
100 3300044901 Ga0466960_0000044 Ga0466960_0000044_11990_12562 190
101 3300044901 Ga0466960_0011927 Ga0466960_0011927_2192_2767 190
102 3300044901 Ga0466960_0036488 Ga0466960_0036488_54_629 190
103 3300044901 Ga0466960_0170746 Ga0466960_0170746_552_1124 190
104 3300044901 Ga0466960_0228782 Ga0466960_0228782_61_633 190
105 3300046462 Ga0495651_0067246 Ga0495651_0067246_264_851 190
106 3300046477 Ga0495664_0210360 Ga0495664_0210360_567_1142 190
107 3300046500 Ga0495596_0041943 Ga0495596_0041943_623_1195 190
108 3300046517 Ga0495630_0000304 Ga0495630_0000304_1663_2250 190
109 3300046517 Ga0495630_0018438 Ga0495630_0018438_2988_3563 190
110 3300046543 Ga0495645_0000183 Ga0495645_0000183_21870_22520 190
111 3300046559 Ga0495667_0217391 Ga0495667_0217391_172_747 190
112 3300046675 Ga0495657_0000006 Ga0495657_0000006_95357_95944 190
113 3300047317 Ga0495604_0002449 Ga0495604_0002449_11765_12382 190
114 3300047317 Ga0495604_0129586 Ga0495604_0129586_141_716 190
115 3300047319 Ga0495674_0974621 Ga0495674_0974621_10_585 190
116 3300047322 Ga0495680_0161334 Ga0495680_0161334_759_1334 190
117 3300047446 Ga0495679_080156 Ga0495679_080156_172_759 190
118 3300047471 Ga0495684_0001764 Ga0495684_0001764_5942_6544 190
119 3300047471 Ga0495684_0017420 Ga0495684_0017420_4718_5305 190
120 3300048088 Ga0495602_0206871 Ga0495602_0206871_191_766 190
121 3300048904 Ga0496101_0678821 Ga0496101_0678821_151_723 190
122 3300048905 Ga0496102_1002643 Ga0496102_1002643_24_596 190
123 3300048913 Ga0496110_0011705 Ga0496110_0011705_340_957 190
124 3300048914 Ga0496111_0000130 Ga0496111_0000130_14165_14782 190
125 3300048915 Ga0496112_0003942 Ga0496112_0003942_9642_10214 190
126 3300048916 Ga0496113_0083622 Ga0496113_0083622_892_1464 190
127 3300048922 Ga0496119_0124285 Ga0496119_0124285_809_1381 190
128 3300048924 Ga0496121_0013353 Ga0496121_0013353_6861_7442 190
129 3300049571 Ga0501034_0361389 Ga0501034_0361389_62_640 190
130 3300049587 Ga0501071_1039783 Ga0501071_1039783_18_590 190
131 3300053077 Ga0495601_0002759 Ga0495601_0002759_9352_9939 190
132 3300053077 Ga0495601_0004235 Ga0495601_0004235_5637_6254 190
133 3300053085 Ga0495619_0089322 Ga0495619_0089322_578_1195 190

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22742

PspAB

PspA associated protein B

22

216

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zv9-assembly1.cif.gz_A terbium(iii)-bound de novo tim barrel-ferredoxin fold fusion dimer with 4-glutamate binding site and tryptophan antenna (tfd-ee n6w) 0.7528 41 114
4pww-assembly1.cif.gz_A-2 crystal structure of engineered protein. northeast structural genomics consortium target or494. 0.751 42 114
8hcn-assembly1.cif.gz_D cryoem structure of klebsiella pneumoniae ured/urease complex 0.7497 44 111
5hpn-assembly1.cif.gz_B-2 a circularly permuted pdua forming an icosahedral cage 0.7367 39 111
5hpn-assembly1.cif.gz_C-2 a circularly permuted pdua forming an icosahedral cage 0.7346 39 111
ID Description Score Start End Superfamily
af_P31120_370_445_3.30.310.50 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.7507 42 111 3.30.310.50
af_Q9LIS1_12_210_3.30.559.10 Alpha Beta;2-Layer Sandwich;Chloramphenicol Acetyltransferase;Chloramphenicol acetyltransferase-like domain 0.7104 75 112 3.30.559.10
af_P76540_1_103_3.30.70.1710 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;BMC (bacterial microcompartment) domain 0.7075 42 122 3.30.70.1710
af_D3ZPW6_59_143_3.30.310.50 Alpha Beta;2-Layer Sandwich;TATA-Binding Protein;Alpha-D-phosphohexomutase, C-terminal domain 0.7065 42 111 3.30.310.50
4rjvB00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Ribosomal protein S10 0.6994 42 114 3.30.70.600
ID Description Score Start End GO Terms
AF-A0A7V8ZKV8-F1-model_v4 Uncharacterized protein 0.9577 73 190
AF-A0A256KGD9-F1-model_v4 deleted 0.9567 21 186
AF-A0A1Q7FCF6-F1-model_v4 Uncharacterized protein 0.9524 22 189
AF-A0A1H6R9R2-F1-model_v4 Uncharacterized protein 0.9519 18 186
AF-A0A2W6BWI2-F1-model_v4 GNAT family N-acetyltransferase 0.949 57 190

Feature Viewer

pLDDT pTM Quality
81.84 0.81 High
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Predicted Structure (AlphaFold2)

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