F157355

General Info

Members Datasets Scaffolds Average Seq Length
133 107 266 136

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0201853|Ga0451576_0201853_463_873
Length 136
Sequence MKKTVSQMVDEALALITTHSVETARTLHGQPGVQFVDLRDPRELEREGAIPGAFHAPRGMLEFWVDTTSPYHKPVFNQPGTQYVLFCAGGWRSALAARTMLEMGIDNVAHIHGGFGAWKAAGAPVEQKAPKPPKPA

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
13 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
14 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
15 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
16 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
20 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
21 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
24 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
26 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
27 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
36 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
37 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
38 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
39 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
40 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
43 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
47 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
48 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
49 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
50 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
51 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
52 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
53 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
54 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
57 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
58 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
59 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
60 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
61 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
62 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
67 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
68 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
69 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
70 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
71 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
75 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
76 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
77 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
78 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
80 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
81 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
82 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
83 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
84 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
85 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
86 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
87 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
88 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
89 2643221734 Bosea sp. Root670 Isolate Unclassified
90 2643221736 Bosea sp. Root483D1 Isolate Unclassified
91 2773857925 Microvirga vignae BR3299 Isolate Unclassified
92 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
93 2818991467 Bosea vestrisii 3192 Isolate Unclassified
94 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
95 2841760612 Bosea sp. Tri-49 Isolate Nodule
96 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
97 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
98 2844104063 Bosea sp. Tri-39 Isolate Nodule
99 2851182111 Bosea sp. Tri-44 Isolate Nodule
100 2851246043 Bosea sp. Tri-54 Isolate Nodule
101 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
102 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
103 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
104 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
105 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
106 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
107 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.21
Metatranscriptomes 0.75
Isolates 15.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.3
Nodule 6.77
Rhizoplane 12.03
Rhizosphere 44.36
Stem 0
Stem Tuber 0
Unclassified 3.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0201853 3300045051 Bacteria 2077
2 JGI25159J45721_1033967 3300002987 Bacteria 793
3 JGI25151J46595_10000038 3300003187 Bacteria 180430
4 JGI25160J50197_1093227 3300003354 Bacteria 544
5 Ga0055542_1012373 3300003762 Bacteria 1477
6 Ga0055529_1010790 3300003763 Bacteria 1184
7 Ga0065165_1000631 3300005262 Bacteria 51108
8 Ga0068869_101383048 3300005334 Bacteria 623
9 Ga0070663_101306811 3300005455 Bacteria 640
10 Ga0068862_101390012 3300005844 Bacteria 705
11 Ga0075365_10219101 3300006038 Bacteria 1335
12 Ga0075365_10608253 3300006038 Bacteria 773
13 Ga0075363_100468213 3300006048 Bacteria 746
14 Ga0075369_10078257 3300006186 Bacteria 1464
15 Ga0105247_10372484 3300009101 Bacteria 1010
16 Ga0105243_10079630 3300009148 Bacteria 2670
17 Ga0105248_11332223 3300009177 Bacteria 812
18 Ga0105249_12326654 3300009553 Bacteria 608
19 Ga0157369_11504038 3300013105 Bacteria 685
20 Ga0171462_1042 3300013250 Bacteria 66199
21 Ga0157380_10110010 3300014326 Bacteria 2313
22 Ga0209148_1002063 3300025254 Bacteria 7729
23 Ga0209455_1000894 3300025272 Bacteria 15603
24 Ga0209130_1000375 3300025284 Bacteria 50482
25 Ga0209676_1035579 3300025292 Bacteria 1458
26 Ga0209025_1000014 3300025294 Bacteria 865448
27 Ga0209025_1001241 3300025294 Bacteria 35462
28 Ga0209025_1053089 3300025294 Bacteria 1594
29 Ga0209025_1130961 3300025294 Bacteria 729
30 Ga0207426_1007156 3300025302 Bacteria 4711
31 Ga0207688_10129370 3300025901 Bacteria 1479
32 Ga0207709_10960606 3300025935 Bacteria 697
33 Ga0207712_10804084 3300025961 Bacteria 827
34 Ga0207648_11160094 3300026089 Bacteria 725
35 Ga0207675_100665262 3300026118 Bacteria 1048
36 Ga0209371_1059919 3300027312 Bacteria 702
37 Ga0307515_10134188 3300028794 Bacteria 2704
38 Ga0307515_10290680 3300028794 Bacteria 1330
39 Ga0265338_10022981 3300028800 Bacteria 6429
40 Ga0265760_10144484 3300031090 Bacteria 776
41 Ga0307405_10750662 3300031731 Bacteria 813
42 Ga0307410_10071765 3300031852 Bacteria 2402
43 Ga0307406_10148295 3300031901 Bacteria 1670
44 Ga0307406_11756952 3300031901 Bacteria 551
45 Ga0307407_10387349 3300031903 Bacteria 999
46 Ga0307412_10089521 3300031911 Bacteria 2149
47 Ga0307409_100059271 3300031995 Bacteria 2978
48 Ga0307415_100099372 3300032126 Bacteria 2130
49 Ga0373937_1982848 3300036401 Unclassified 528
50 Ga0395905_0210789 3300037471 Bacteria 1820
51 Ga0436364_0384698 3300037853 Bacteria 1796
52 Ga0237819_03729 3300038705 Bacteria 2638
53 Ga0400483_019481 3300039062 Bacteria 1404
54 Ga0400483_216973 3300039062 Bacteria 1012
55 Ga0400483_279114 3300039062 Bacteria 3314
56 Ga0436360_0443669 3300039438 Bacteria 877
57 Ga0436361_0805837 3300039447 Bacteria 2062
58 Ga0436361_1019222 3300039447 Bacteria 1384
59 Ga0451802_1494264 3300041460 Bacteria 606
60 Ga0451577_0990436 3300042876 Bacteria 755
61 Ga0466972_0046538 3300044658 Bacteria 2100
62 Ga0453684_0537962 3300044712 Bacteria 1288
63 Ga0466960_0101396 3300044901 Bacteria 1483
64 Ga0466960_0831626 3300044901 Bacteria 560
65 Ga0466959_0691074 3300045049 Bacteria 684
66 Ga0495643_0067359 3300046522 Bacteria 1887
67 Ga0495640_0133649 3300046533 Unclassified 1604
68 Ga0495635_0343630 3300046663 Unclassified 996
69 Ga0495680_0397080 3300047322 Bacteria 953
70 Ga0495680_0521288 3300047322 Unclassified 804
71 Ga0496104_0000101 3300048907 Bacteria 83079
72 Ga0496104_0023339 3300048907 Bacteria 5686
73 Ga0496104_0106612 3300048907 Bacteria 2685
74 Ga0496104_0249044 3300048907 Bacteria 1689
75 Ga0496105_0000191 3300048908 Bacteria 40923
76 Ga0496105_0073123 3300048908 Bacteria 2833
77 Ga0496105_0265139 3300048908 Bacteria 1388
78 Ga0496105_1228335 3300048908 Bacteria 550
79 Ga0496111_0363184 3300048914 Bacteria 1071
80 Ga0496112_0058773 3300048915 Bacteria 3787
81 Ga0496113_0017980 3300048916 Bacteria 4916
82 Ga0496113_0110861 3300048916 Bacteria 2136
83 Ga0496115_0027638 3300048918 Bacteria 4440
84 Ga0496115_0096707 3300048918 Bacteria 2418
85 Ga0496115_0122069 3300048918 Bacteria 2144
86 Ga0496117_0223463 3300048920 Bacteria 1046
87 Ga0496119_0000622 3300048922 Bacteria 47818
88 Ga0496119_0009173 3300048922 Bacteria 8545
89 Ga0496119_0027299 3300048922 Bacteria 3928
90 Ga0496120_0142307 3300048923 Bacteria 1216
91 Ga0496122_0024846 3300048925 Bacteria 5230
92 Ga0496123_0036534 3300048926 Bacteria 3482
93 Ga0496125_0392459 3300048928 Bacteria 814
94 Ga0501034_0292595 3300049571 Bacteria 1566
95 Ga0501034_0371712 3300049571 Bacteria 1356
96 Ga0501046_0571152 3300049580 Bacteria 805
97 Ga0501238_000536 3300049671 Bacteria 4359
98 Ga0501252_004374 3300049682 Bacteria 1504
99 Ga0501080_0084440 3300049742 Bacteria 2950
100 Ga0501080_0164221 3300049742 Bacteria 2050
101 Ga0501083_0202217 3300049744 Bacteria 1295
102 Ga0501044_0513457 3300049823 Bacteria 1098
103 Ga0501044_1011633 3300049823 Bacteria 703
104 Ga0501212_032669 3300049851 Bacteria 843
105 nmdc:mga03n38_168269_c2 3300050490 Bacteria 700
106 nmdc:mga0yw44_472552_c1 3300050492 Bacteria 850
107 nmdc:mga0sz30_25586_c2 3300050516 Bacteria 1868
108 Ga0500578_0346846 3300053086 Bacteria 869
109 Ga0500577_0441667 3300053142 Bacteria 569
110 Ga0500622_0046942 3300053156 Bacteria 2231
111 Ga0500622_0175154 3300053156 Bacteria 995
112 Ga0500636_0109978 3300053177 Bacteria 1558
113 Ga0590077_091872 3300059426 Bacteria 705
114 2509078598 2508501114 Bacteria 7082538
115 2644735450 2643221734 Bacteria 5365412
116 2644747707 2643221736 Bacteria 6608466
117 2774874862 2773857925 Bacteria 6472445
118 2776259186 2775506901 Bacteria 9631051
119 2819720962 2818991467 Bacteria 5893227
120 2835313658 2835312727 Bacteria 7413381
121 2841761425 2841760612 Bacteria 6454112
122 2841913423 2841911363 Bacteria 6173697
123 2841919170 2841917233 Bacteria 6173500
124 2844104450 2844104063 Bacteria 6440972
125 2851184497 2851182111 Bacteria 6047226
126 2851247438 2851246043 Bacteria 6439203
127 2882459730 2882456835 Bacteria 6863978
128 2883297027 2883291878 Bacteria 5894118
129 2883359807 2883354860 Bacteria 5865246
130 2884300407 2884298095 Bacteria 3823049
131 2917699307 2917699015 Bacteria 7043791
132 2996311871 2996310559 Bacteria 6357320
133 8057530390 8057529695 Bacteria 6306553
134 Ga0451576_0201853
135 JGI25159J45721_1033967
136 JGI25151J46595_10000038
137 JGI25160J50197_1093227
138 Ga0055542_1012373
139 Ga0055529_1010790
140 Ga0065165_1000631
141 Ga0068869_101383048
142 Ga0070663_101306811
143 Ga0068862_101390012
144 Ga0075365_10219101
145 Ga0075365_10608253
146 Ga0075363_100468213
147 Ga0075369_10078257
148 Ga0105247_10372484
149 Ga0105243_10079630
150 Ga0105248_11332223
151 Ga0105249_12326654
152 Ga0157369_11504038
153 Ga0171462_1042
154 Ga0157380_10110010
155 Ga0209148_1002063
156 Ga0209455_1000894
157 Ga0209130_1000375
158 Ga0209676_1035579
159 Ga0209025_1000014
160 Ga0209025_1001241
161 Ga0209025_1053089
162 Ga0209025_1130961
163 Ga0207426_1007156
164 Ga0207688_10129370
165 Ga0207709_10960606
166 Ga0207712_10804084
167 Ga0207648_11160094
168 Ga0207675_100665262
169 Ga0209371_1059919
170 Ga0307515_10134188
171 Ga0307515_10290680
172 Ga0265338_10022981
173 Ga0265760_10144484
174 Ga0307405_10750662
175 Ga0307410_10071765
176 Ga0307406_10148295
177 Ga0307406_11756952
178 Ga0307407_10387349
179 Ga0307412_10089521
180 Ga0307409_100059271
181 Ga0307415_100099372
182 Ga0373937_1982848
183 Ga0395905_0210789
184 Ga0436364_0384698
185 Ga0237819_03729
186 Ga0400483_019481
187 Ga0400483_216973
188 Ga0400483_279114
189 Ga0436360_0443669
190 Ga0436361_0805837
191 Ga0436361_1019222
192 Ga0451802_1494264
193 Ga0451577_0990436
194 Ga0466972_0046538
195 Ga0453684_0537962
196 Ga0466960_0101396
197 Ga0466960_0831626
198 Ga0466959_0691074
199 Ga0495643_0067359
200 Ga0495640_0133649
201 Ga0495635_0343630
202 Ga0495680_0397080
203 Ga0495680_0521288
204 Ga0496104_0000101
205 Ga0496104_0023339
206 Ga0496104_0106612
207 Ga0496104_0249044
208 Ga0496105_0000191
209 Ga0496105_0073123
210 Ga0496105_0265139
211 Ga0496105_1228335
212 Ga0496111_0363184
213 Ga0496112_0058773
214 Ga0496113_0017980
215 Ga0496113_0110861
216 Ga0496115_0027638
217 Ga0496115_0096707
218 Ga0496115_0122069
219 Ga0496117_0223463
220 Ga0496119_0000622
221 Ga0496119_0009173
222 Ga0496119_0027299
223 Ga0496120_0142307
224 Ga0496122_0024846
225 Ga0496123_0036534
226 Ga0496125_0392459
227 Ga0501034_0292595
228 Ga0501034_0371712
229 Ga0501046_0571152
230 Ga0501238_000536
231 Ga0501252_004374
232 Ga0501080_0084440
233 Ga0501080_0164221
234 Ga0501083_0202217
235 Ga0501044_0513457
236 Ga0501044_1011633
237 Ga0501212_032669
238 nmdc:mga03n38_168269_c2
239 nmdc:mga0yw44_472552_c1
240 nmdc:mga0sz30_25586_c2
241 Ga0500578_0346846
242 Ga0500577_0441667
243 Ga0500622_0046942
244 Ga0500622_0175154
245 Ga0500636_0109978
246 Ga0590077_091872
247 2509078598
248 2644735450
249 2644747707
250 2774874862
251 2776259186
252 2819720962
253 2835313658
254 2841761425
255 2841913423
256 2841919170
257 2844104450
258 2851184497
259 2851247438
260 2882459730
261 2883297027
262 2883359807
263 2884300407
264 2917699307
265 2996311871
266 8057530390

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00581

Rhodanese

Rhodanese-like domain

20

121

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hhg-assembly1.cif.gz_A structure of protein of unknown function rpa3614, possible tyrosine phosphatase, from rhodopseudomonas palustris cga009 0.9647 1 129
2hhg-assembly1.cif.gz_A structure of protein of unknown function rpa3614, possible tyrosine phosphatase, from rhodopseudomonas palustris cga009 0.9363 1 129
3gk5-assembly1.cif.gz_A crystal structure of rhodanese-related protein (tvg0868615) from thermoplasma volcanium, northeast structural genomics consortium target tvr109a 0.9089 21 128
3tp9-assembly1.cif.gz_B crystal structure of alicyclobacillus acidocaldarius protein with beta-lactamase and rhodanese domains 0.9026 20 129
3foj-assembly1.cif.gz_A crystal structure of ssp1007 from staphylococcus saprophyticus subsp. saprophyticus. northeast structural genomics target syr101a. 0.8966 20 121
ID Description Score Start End Superfamily
2hhgA00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9477 1 129 3.40.250.10
2hhgA00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9405 1 129 3.40.250.10
3gk5A00 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.9089 21 128 3.40.250.10
3ntaA03 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8999 20 124 3.40.250.10
3tp9B03 Alpha Beta;3-Layer(aba) Sandwich;Oxidized Rhodanese; domain 1;Rhodanese-like domain 0.8929 21 129 3.40.250.10
ID Description Score Start End GO Terms
AF-M2YT58-F1-model_v4 Rhodanese domain-containing protein 0.9904 6 130 GO:0004792
AF-A0A1X1QU56-F1-model_v4 Rhodanese 0.9891 2 129 GO:0004792
AF-A0A2R8ACU8-F1-model_v4 Rhodanese domain-containing protein 0.9882 5 129 GO:0004792
AF-A0A840WWU3-F1-model_v4 Rhodanese-related sulfurtransferase 0.9876 6 129 GO:0004792
AF-A0A2E6ME15-F1-model_v4 deleted 0.9865 4 129

Map