F157047

General Info

Members Datasets Scaffolds Average Seq Length
133 104 266 542

Family's Representative Sequence

Representative Sequence 3300035695|Ga0373927_0031045|Ga0373927_0031045_1491_3170
Length 559
Sequence VQANNNPKLACDGEEAVPELQDGLTIGEVFAAAVASHGDRPFFAVPPNESRGYLPAGFEITYRDAAKQVAELTAAYRSAGYGLGHRVATLLENRPEYVLHKLALNAVGACCVPINPDYRAGETAYLLEHSQPDLVLTLAEREAQIAEALAHSRHQPPLMVSDGFAAGTLAAESRPAQGGPPTPETPASILYTSGTTGRPKGCILSQGYEVACGAWYASLGGVATFRPGQERIYNPLPLYHVNAGIVSLLGAMWTGNCQVQPDRFHPQRWWHEIADSRATVVHYLGIIAPLLLAQAPDAAERCHGVRFGIGAGIEPQLHAAFEERFGFPLVEIWGMTEMVRVLGDSFEPRQVGTRAFGRAVEGIDVRVVDDQDRDVADGQPGEMLVRHSAATPRRGCFSGYLADAAATEAAWRGGWFHTGDTVTRAPDGMLHFVDRKKNIIRRSGENIAAAEIEAMLLTHPDVQQAAVMAVKDELREEEVLACVVLKHPRPAAEAADALFQHCYEQLAYNKAPGWLHVVDSLPTTGTQKIQKHTIYPGGTDPRTAPGIIDLRARKKRPHA

Samples

Sample ID Description Type Environment
1 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
9 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
15 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
32 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
33 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
51 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
52 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
56 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
57 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
58 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
61 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
62 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
63 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
66 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
67 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
68 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
69 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
70 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
71 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
72 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
79 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
82 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
83 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
88 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
89 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
90 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
91 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
92 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
93 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
94 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
95 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
96 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
97 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
98 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
99 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
102 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
103 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
104 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.99
Metatranscriptomes 0
Isolates 3.01

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.29
Nodule 0.75
Rhizoplane 3.01
Rhizosphere 71.43
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373927_0031045 3300035695 Bacteria 3485
2 JGI25406J46586_10012075 3300003203 Bacteria 3762
3 JGI25153J46596_10000547 3300003215 Bacteria 23454
4 Ga0065165_1012925 3300005262 Bacteria 3358
5 Ga0070691_10008076 3300005341 Bacteria 4817
6 Ga0070706_100055930 3300005467 Bacteria 3642
7 Ga0070698_100000120 3300005471 Bacteria 67569
8 Ga0070697_100035181 3300005536 Bacteria 4040
9 Ga0070695_100000943 3300005545 Bacteria 15766
10 Ga0070695_100086137 3300005545 Bacteria 2087
11 Ga0070665_100000396 3300005548 Bacteria 64229
12 Ga0070665_100002343 3300005548 Bacteria 20993
13 Ga0070665_100005438 3300005548 Bacteria 13137
14 Ga0068855_100060942 3300005563 Bacteria 4409
15 Ga0068856_100009974 3300005614 Bacteria 9221
16 Ga0081455_10000069 3300005937 Bacteria 111044
17 Ga0081455_10004175 3300005937 Bacteria 16284
18 Ga0081540_1000032 3300005983 Bacteria 144522
19 Ga0081539_10003821 3300005985 Bacteria 17706
20 Ga0081539_10007739 3300005985 Bacteria 9631
21 Ga0075365_10025726 3300006038 Bacteria 3728
22 Ga0070712_100124943 3300006175 Bacteria 1942
23 Ga0075362_10000417 3300006177 Bacteria 12254
24 Ga0075362_10016460 3300006177 Bacteria 3028
25 Ga0075362_10032919 3300006177 Bacteria 2253
26 Ga0075369_10000033 3300006186 Bacteria 36877
27 Ga0075428_100006547 3300006844 Bacteria 12951
28 Ga0075431_100091075 3300006847 Bacteria 3148
29 Ga0075433_10004540 3300006852 Bacteria 10827
30 Ga0075434_100026830 3300006871 Bacteria 5649
31 Ga0075435_100002188 3300007076 Bacteria 12891
32 Ga0075435_100074168 3300007076 Bacteria 2783
33 Ga0105240_10126631 3300009093 Bacteria 3068
34 Ga0111539_10008426 3300009094 Bacteria 13116
35 Ga0111539_10027193 3300009094 Bacteria 6986
36 Ga0114129_10004274 3300009147 Bacteria 20178
37 Ga0114129_10044222 3300009147 Bacteria 6264
38 Ga0114129_10131917 3300009147 Bacteria 3430
39 Ga0105238_10007058 3300009551 Bacteria 11236
40 Ga0157372_10082749 3300013307 Bacteria 3634
41 Ga0163163_10026365 3300014325 Bacteria 5555
42 Ga0182007_10008631 3300015262 Bacteria 4171
43 Ga0209758_1000165 3300025297 Bacteria 151122
44 Ga0207426_1001216 3300025302 Bacteria 22731
45 Ga0207684_10034932 3300025910 Bacteria 4270
46 Ga0207695_10100393 3300025913 Bacteria 2890
47 Ga0207693_10103920 3300025915 Bacteria 2228
48 Ga0207646_10022245 3300025922 Bacteria 5845
49 Ga0207694_10003726 3300025924 Bacteria 12074
50 Ga0207700_10069241 3300025928 Bacteria 2708
51 Ga0207670_10090701 3300025936 Bacteria 2160
52 Ga0207661_10078711 3300025944 Bacteria 2715
53 Ga0207667_10055315 3300025949 Bacteria 4171
54 Ga0207639_10107806 3300026041 Bacteria 2263
55 Ga0207708_10133673 3300026075 Bacteria 1941
56 Ga0207702_10184655 3300026078 Bacteria 1922
57 Ga0207683_10065319 3300026121 Bacteria 3208
58 Ga0207428_10090526 3300027907 Bacteria 2376
59 Ga0268266_10000676 3300028379 Bacteria 46038
60 Ga0268266_10009589 3300028379 Bacteria 8514
61 Ga0307515_10079757 3300028794 Bacteria 4281
62 Ga0307513_10081663 3300031456 Bacteria 3330
63 Ga0373939_0003202 3300035114 Bacteria 3838
64 Ga0373931_0000145 3300035691 Bacteria 30974
65 Ga0373931_0006420 3300035691 Bacteria 5493
66 Ga0373927_0118173 3300035695 Bacteria 1730
67 Ga0395900_0018223 3300037418 Bacteria 7163
68 Ga0395900_0144039 3300037418 Bacteria 2438
69 Ga0395898_0036860 3300037466 Bacteria 4853
70 Ga0395901_0042419 3300038443 Bacteria 4716
71 Ga0395901_0090511 3300038443 Bacteria 3202
72 Ga0395901_0092128 3300038443 Bacteria 3172
73 Ga0436361_0270293 3300039447 Bacteria 6222
74 Ga0450911_000283 3300042115 Bacteria 18730
75 Ga0466963_0034293 3300044694 Bacteria 3302
76 Ga0466967_0057140 3300045976 Bacteria 3443
77 Ga0495639_0042078 3300046475 Bacteria 2059
78 Ga0495597_0000083 3300046542 Bacteria 83574
79 Ga0495633_0004102 3300046558 Bacteria 9398
80 Ga0495588_0032316 3300046674 Bacteria 2637
81 Ga0496104_0002555 3300048907 Bacteria 15684
82 Ga0496105_0085759 3300048908 Bacteria 2602
83 Ga0496106_0124865 3300048909 Bacteria 2014
84 Ga0496108_0208310 3300048911 Bacteria 1697
85 Ga0496121_0013661 3300048924 Bacteria 8705
86 Ga0496121_0056709 3300048924 Bacteria 3251
87 Ga0496124_0120783 3300048927 Bacteria 2094
88 Ga0496125_0004293 3300048928 Bacteria 16548
89 Ga0496125_0009492 3300048928 Bacteria 9987
90 Ga0496125_0018306 3300048928 Bacteria 6656
91 Ga0496125_0057329 3300048928 Bacteria 3156
92 Ga0496126_0056542 3300048929 Bacteria 3546
93 Ga0501031_0037792 3300049568 Bacteria 3151
94 Ga0501034_0004892 3300049571 Bacteria 14770
95 Ga0501034_0017718 3300049571 Bacteria 7304
96 Ga0501034_0042095 3300049571 Bacteria 4623
97 Ga0501034_0081891 3300049571 Bacteria 3230
98 Ga0501037_0004726 3300049573 Bacteria 9898
99 Ga0501041_0047733 3300049577 Unclassified 2607
100 Ga0501042_0072250 3300049578 Bacteria 2469
101 Ga0501072_0000797 3300049588 Bacteria 23180
102 Ga0501076_0089644 3300049592 Bacteria 2473
103 Ga0501081_0028920 3300049743 Bacteria 3743
104 Ga0501044_0059874 3300049823 Bacteria 3901
105 nmdc:mga03683_480_c1 3300050489 Bacteria 11558
106 nmdc:mga0yw44_16562_c1 3300050492 Bacteria 3985
107 nmdc:mga0yw44_25223_c1 3300050492 Bacteria 3377
108 nmdc:mga07m45_57015_c1 3300050496 Bacteria 2208
109 nmdc:mga05p37_82537_c1 3300050507 Bacteria 3960
110 nmdc:mga09592_17602_c1 3300050508 Bacteria 5855
111 nmdc:mga0qj67_65455_c1 3300050509 Bacteria 2894
112 nmdc:mga08y16_15583_c1 3300050511 Bacteria 7993
113 nmdc:mga08y16_61778_c1 3300050511 Bacteria 3912
114 nmdc:mga08y16_9072_c1 3300050511 Bacteria 10440
115 nmdc:mga0n895_3714_c1 3300050512 Bacteria 12346
116 nmdc:mga0rr50_64340_c1 3300050513 Bacteria 2774
117 nmdc:mga0a205_9169_c2 3300050515 Bacteria 6601
118 nmdc:mga0sz30_16466_c1 3300050516 Bacteria 2936
119 nmdc:mga0sz30_56_c1 3300050516 Bacteria 42210
120 Ga0500651_0002354 3300053093 Bacteria 9943
121 Ga0500641_0000224 3300053096 Bacteria 21216
122 Ga0500562_002890 3300053108 Bacteria 4284
123 Ga0500569_011239 3300053109 Bacteria 2133
124 Ga0500594_0004823 3300053118 Bacteria 2981
125 Ga0500588_0000975 3300053146 Bacteria 5115
126 Ga0500619_000012 3300053154 Bacteria 57280
127 Ga0500627_0004830 3300053158 Bacteria 4390
128 Ga0501082_0000010 3300060353 Bacteria 122899
129 Ga0501082_0026621 3300060353 Bacteria 4985
130 2894023763 2894023352 Bacteria 5167372
131 2894772752 2894772417 Bacteria 5305674
132 2932426292 2932422444 Bacteria 4678430
133 2939634268 2939631187 Bacteria 6118131
134 Ga0373927_0031045
135 JGI25406J46586_10012075
136 JGI25153J46596_10000547
137 Ga0065165_1012925
138 Ga0070691_10008076
139 Ga0070706_100055930
140 Ga0070698_100000120
141 Ga0070697_100035181
142 Ga0070695_100000943
143 Ga0070695_100086137
144 Ga0070665_100000396
145 Ga0070665_100002343
146 Ga0070665_100005438
147 Ga0068855_100060942
148 Ga0068856_100009974
149 Ga0081455_10000069
150 Ga0081455_10004175
151 Ga0081540_1000032
152 Ga0081539_10003821
153 Ga0081539_10007739
154 Ga0075365_10025726
155 Ga0070712_100124943
156 Ga0075362_10000417
157 Ga0075362_10016460
158 Ga0075362_10032919
159 Ga0075369_10000033
160 Ga0075428_100006547
161 Ga0075431_100091075
162 Ga0075433_10004540
163 Ga0075434_100026830
164 Ga0075435_100002188
165 Ga0075435_100074168
166 Ga0105240_10126631
167 Ga0111539_10008426
168 Ga0111539_10027193
169 Ga0114129_10004274
170 Ga0114129_10044222
171 Ga0114129_10131917
172 Ga0105238_10007058
173 Ga0157372_10082749
174 Ga0163163_10026365
175 Ga0182007_10008631
176 Ga0209758_1000165
177 Ga0207426_1001216
178 Ga0207684_10034932
179 Ga0207695_10100393
180 Ga0207693_10103920
181 Ga0207646_10022245
182 Ga0207694_10003726
183 Ga0207700_10069241
184 Ga0207670_10090701
185 Ga0207661_10078711
186 Ga0207667_10055315
187 Ga0207639_10107806
188 Ga0207708_10133673
189 Ga0207702_10184655
190 Ga0207683_10065319
191 Ga0207428_10090526
192 Ga0268266_10000676
193 Ga0268266_10009589
194 Ga0307515_10079757
195 Ga0307513_10081663
196 Ga0373939_0003202
197 Ga0373931_0000145
198 Ga0373931_0006420
199 Ga0373927_0118173
200 Ga0395900_0018223
201 Ga0395900_0144039
202 Ga0395898_0036860
203 Ga0395901_0042419
204 Ga0395901_0090511
205 Ga0395901_0092128
206 Ga0436361_0270293
207 Ga0450911_000283
208 Ga0466963_0034293
209 Ga0466967_0057140
210 Ga0495639_0042078
211 Ga0495597_0000083
212 Ga0495633_0004102
213 Ga0495588_0032316
214 Ga0496104_0002555
215 Ga0496105_0085759
216 Ga0496106_0124865
217 Ga0496108_0208310
218 Ga0496121_0013661
219 Ga0496121_0056709
220 Ga0496124_0120783
221 Ga0496125_0004293
222 Ga0496125_0009492
223 Ga0496125_0018306
224 Ga0496125_0057329
225 Ga0496126_0056542
226 Ga0501031_0037792
227 Ga0501034_0004892
228 Ga0501034_0017718
229 Ga0501034_0042095
230 Ga0501034_0081891
231 Ga0501037_0004726
232 Ga0501041_0047733
233 Ga0501042_0072250
234 Ga0501072_0000797
235 Ga0501076_0089644
236 Ga0501081_0028920
237 Ga0501044_0059874
238 nmdc:mga03683_480_c1
239 nmdc:mga0yw44_16562_c1
240 nmdc:mga0yw44_25223_c1
241 nmdc:mga07m45_57015_c1
242 nmdc:mga05p37_82537_c1
243 nmdc:mga09592_17602_c1
244 nmdc:mga0qj67_65455_c1
245 nmdc:mga08y16_15583_c1
246 nmdc:mga08y16_61778_c1
247 nmdc:mga08y16_9072_c1
248 nmdc:mga0n895_3714_c1
249 nmdc:mga0rr50_64340_c1
250 nmdc:mga0a205_9169_c2
251 nmdc:mga0sz30_16466_c1
252 nmdc:mga0sz30_56_c1
253 Ga0500651_0002354
254 Ga0500641_0000224
255 Ga0500562_002890
256 Ga0500569_011239
257 Ga0500594_0004823
258 Ga0500588_0000975
259 Ga0500619_000012
260 Ga0500627_0004830
261 Ga0501082_0000010
262 Ga0501082_0026621
263 2894023763
264 2894772752
265 2932426292
266 2939634268

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

451

528

0.92

PF00501

AMP-binding

AMP-binding enzyme

30

401

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.8941 7 514
5x8g-assembly2.cif.gz_D binary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with its product analogue osb-ncoa at 1.90 angstrom 0.893 7 514
8biq-assembly4.cif.gz_D crystal structure of acyl-coa synthetase from metallosphaera sedula in complex with acetyl-amp 0.8888 5 530
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.8862 7 418
5gxd-assembly1.cif.gz_A structure of acryloyl-coa lyase prpe from dinoroseobacter shibae dfl 12 0.8852 7 514
ID Description Score Start End Superfamily
af_P69451_456_557_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.957 422 514 3.30.300.30
af_A0A0R0JS26_74_160_3.40.50.980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9528 49 128 3.40.50.980
af_P96396_433_536_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9494 421 513 3.30.300.30
af_P27550_518_652_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9437 422 512 3.30.300.30
3etcA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9402 421 501 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A501PFA5-F1-model_v4 ATP-dependent acyl-CoA ligase 0.9698 9 537 GO:0016874
AF-A0A501PFA5-F1-model_v4 ATP-dependent acyl-CoA ligase 0.9486 9 537 GO:0016874
AF-A0A535GR94-F1-model_v4 Acetyl-CoA synthetase 0.9286 422 512 GO:0003987
GO:0006085
AF-A0A497PNT5-F1-model_v4 AMP-binding protein 0.9157 8 121
AF-A0A482RQG2-F1-model_v4 deleted 0.8972 35 145

Map