F149863

General Info

Members Datasets Scaffolds Average Seq Length
131 60 129 283

Family's Representative Sequence

Representative Sequence 3300035089|Ga0373944_0035159|Ga0373944_0035159_222_1133
Length 303
Sequence LAEARPVAQHAPEIIMELEQVVLAHEPAIRLAFFLAVFALIGVWEVVAPRRALTVSKAMRWASNLSLVALNTLLLRLVFPLAAAGIAAFGVANGWGLINHFQVPFWIAVPLAVVAMDLVIWLQHVMVHAVPALWRLHRVHHADLDYDVTTGARFHPIEIALSMLIKFATITVLGPPVLAVVIFEVLLNATAMFNHGNIRIPVAFDRVLRWIVVTPDMHRVHHSVEDDETNSNFGFNLPWWDRLFGTYRAQPRAGHEGMTIGIQGHADPREVARLDGMLMLPFRGEVDGYAINRRDWRSEHATR

Samples

Sample ID Description Type Environment
1 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
2 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
5 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
6 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
7 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
8 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
9 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
10 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
11 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
12 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
13 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
14 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
15 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
16 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
17 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
18 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
19 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
22 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
23 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
24 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
25 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
26 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
27 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
28 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
29 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
30 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
31 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
32 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
33 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
34 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
35 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
36 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
37 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
38 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
39 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
40 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
41 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
42 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
43 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
44 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
45 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
46 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
47 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
48 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
49 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
50 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
52 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
53 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
54 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
55 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
56 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
58 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
59 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
60 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.42
Metatranscriptomes 3.05
Isolates 1.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 82.44
Stem 0
Stem Tuber 0
Unclassified 17.56

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10003144 3300005295 Bacteria 5695
2 Ga0065707_10084018 3300005295 Bacteria 7818
3 Ga0068855_100083981 3300005563 Bacteria 3688
4 Ga0068860_100122829 3300005843 Bacteria 2488
5 Ga0070716_100021235 3300006173 Bacteria 3418
6 Ga0075434_100029440 3300006871 Bacteria 5404
7 Ga0105240_10119301 3300009093 Bacteria 3177
8 Ga0207665_10030999 3300025939 Bacteria 3537
9 Ga0210000_1009923 3300027462 Bacteria 1406
10 Ga0316575_10001197 3300031665 Bacteria 8198
11 Ga0316575_10001896 3300031665 Bacteria 6903
12 Ga0316575_10017932 3300031665 Bacteria 2694
13 Ga0316575_10025630 3300031665 Bacteria 2288
14 Ga0316575_10030800 3300031665 Bacteria 2098
15 Ga0316575_10036862 3300031665 Unclassified 1925
16 Ga0316579_10000073 3300031691 Bacteria 25083
17 Ga0316579_10003718 3300031691 Bacteria 6004
18 Ga0316579_10032957 3300031691 Bacteria 2378
19 Ga0316579_10041909 3300031691 Bacteria 2125
20 Ga0316579_10108384 3300031691 Bacteria 1332
21 Ga0316579_10116246 3300031691 Bacteria 1284
22 Ga0316579_10138208 3300031691 Bacteria 1174
23 Ga0316576_10000495 3300031727 Bacteria 18473
24 Ga0316576_10013122 3300031727 Bacteria 5496
25 Ga0316576_10023582 3300031727 Bacteria 4288
26 Ga0316576_10069039 3300031727 Bacteria 2605
27 Ga0316576_10069139 3300031727 Bacteria 2603
28 Ga0316576_10191608 3300031727 Bacteria 1541
29 Ga0316576_10207749 3300031727 Bacteria 1474
30 Ga0316578_10001107 3300031728 Bacteria 10514
31 Ga0316578_10006054 3300031728 Bacteria 5930
32 Ga0316578_10028467 3300031728 Bacteria 3164
33 Ga0316578_10089716 3300031728 Bacteria 1835
34 Ga0316578_10093162 3300031728 Bacteria 1801
35 Ga0316578_10118000 3300031728 Bacteria 1594
36 Ga0316577_10000469 3300031733 Bacteria 15853
37 Ga0316577_10002013 3300031733 Bacteria 9909
38 Ga0316577_10060259 3300031733 Bacteria 2118
39 Ga0316577_10065802 3300031733 Bacteria 2024
40 Ga0316577_10113716 3300031733 Bacteria 1519
41 Ga0316583_10003588 3300032133 Bacteria 5482
42 Ga0316583_10006635 3300032133 Bacteria 4165
43 Ga0316583_10015073 3300032133 Bacteria 2782
44 Ga0316585_10000058 3300032137 Bacteria 17920
45 Ga0316585_10000059 3300032137 Bacteria 17769
46 Ga0316585_10009908 3300032137 Bacteria 2788
47 Ga0316580_10000017 3300032139 Bacteria 25943
48 Ga0316580_10006304 3300032139 Bacteria 3502
49 Ga0316580_10016035 3300032139 Bacteria 2295
50 Ga0316593_10002993 3300032168 Bacteria 4115
51 Ga0316593_10004979 3300032168 Bacteria 3463
52 Ga0316593_10043062 3300032168 Bacteria 1507
53 Ga0316596_1016911 3300033541 Bacteria 1829
54 Ga0373926_0017482 3300035083 Unclassified 2461
55 Ga0373944_0035159 3300035089 Bacteria 1526
56 Ga0373936_0192466 3300035113 Bacteria 898
57 Ga0373943_0116246 3300035170 Unclassified 1417
58 Ga0316574_0000146 3300035398 Bacteria 22532
59 Ga0316574_0001687 3300035398 Bacteria 10667
60 Ga0316574_0005434 3300035398 Bacteria 6794
61 Ga0316574_0021294 3300035398 Bacteria 3849
62 Ga0316574_0036020 3300035398 Bacteria 3028
63 Ga0316574_0055384 3300035398 Bacteria 2478
64 Ga0316574_0072312 3300035398 Bacteria 2179
65 Ga0316574_0292747 3300035398 Bacteria 1036
66 Ga0316574_0375002 3300035398 Bacteria 898
67 Ga0373927_0079070 3300035695 Unclassified 2130
68 Ga0373937_0117911 3300036401 Bacteria 2473
69 Ga0316582_0045509 3300036647 Bacteria 2763
70 Ga0316582_0103745 3300036647 Bacteria 1886
71 Ga0316582_0106672 3300036647 Bacteria 1860
72 Ga0316582_0171156 3300036647 Bacteria 1474
73 Ga0316582_0247670 3300036647 Bacteria 1221
74 Ga0316582_0423883 3300036647 Bacteria 917
75 Ga0316584_0000512 3300036712 Bacteria 20527
76 Ga0316584_0008283 3300036712 Bacteria 7160
77 Ga0316584_0009853 3300036712 Bacteria 6651
78 Ga0316584_0019830 3300036712 Bacteria 4864
79 Ga0316584_0089313 3300036712 Bacteria 2307
80 Ga0316584_0203819 3300036712 Bacteria 1458
81 Ga0373925_0003824 3300037068 Bacteria 11551
82 Ga0373925_0003940 3300037068 Bacteria 11330
83 Ga0316581_0025580 3300037588 Bacteria 1756
84 Ga0400484_04996 3300038725 Bacteria 5044
85 Ga0400484_07992 3300038725 Bacteria 2090
86 Ga0400490_17397 3300038726 Bacteria 3604
87 Ga0400490_35079 3300038726 Bacteria 4880
88 Ga0400490_48716 3300038726 Bacteria 31931
89 Ga0400490_49783 3300038726 Bacteria 19581
90 Ga0400490_50756 3300038726 Bacteria 19626
91 Ga0400490_55601 3300038726 Bacteria 31889
92 Ga0400491_11027 3300038727 Bacteria 2871
93 Ga0400485_20426 3300038735 Bacteria 2440
94 Ga0400488_17573 3300038741 Bacteria 4278
95 Ga0400488_47502 3300038741 Bacteria 1067
96 Ga0400488_62151 3300038741 Bacteria 8161
97 Ga0400486_26995 3300038742 Bacteria 9120
98 Ga0400483_048397 3300039062 Bacteria 5274
99 Ga0400483_147650 3300039062 Bacteria 4468
100 Ga0400483_266970 3300039062 Bacteria 5650
101 Ga0400483_280548 3300039062 Bacteria 12355
102 Ga0400489_37863 3300039093 Bacteria 2681
103 Ga0400489_69272 3300039093 Bacteria 8704
104 Ga0400487_07502 3300039110 Bacteria 37978
105 Ga0400487_55644 3300039110 Bacteria 47406
106 Ga0400487_63125 3300039110 Bacteria 30492
107 Ga0451577_0059719 3300042876 Bacteria 3400
108 Ga0451577_0287443 3300042876 Bacteria 1490
109 Ga0453683_0026517 3300044673 Bacteria 3680
110 Ga0453683_0137361 3300044673 Bacteria 1542
111 Ga0453684_0337652 3300044712 Bacteria 1702
112 Ga0451576_0000386 3300045051 Bacteria 102813
113 Ga0495630_0032437 3300046517 Unclassified 3892
114 Ga0501037_0055233 3300049573 Bacteria 2904
115 Ga0501039_0025012 3300049575 Bacteria 4585
116 Ga0501041_0002632 3300049577 Bacteria 10244
117 Ga0501042_0123688 3300049578 Bacteria 1863
118 Ga0501046_0060026 3300049580 Bacteria 2977
119 Ga0501071_0052834 3300049587 Bacteria 2930
120 Ga0501071_0422231 3300049587 Bacteria 1019
121 Ga0501075_0148394 3300049591 Bacteria 1787
122 Ga0501076_0027502 3300049592 Bacteria 4410
123 Ga0501079_0009451 3300049741 Bacteria 7391
124 Ga0501081_0521071 3300049743 Bacteria 887
125 Ga0501035_0265766 3300049822 Bacteria 1453
126 Ga0501045_0428244 3300049824 Bacteria 984
127 nmdc:mga0n895_28126_c2 3300050512 Bacteria 2577
128 Ga0501084_0390190 3300054114 Bacteria 1176
129 Ga0501082_0030740 3300060353 Bacteria 4629

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035113 Ga0373936_0192466 Ga0373936_0192466_128_862 242
2 3300049587 Ga0501071_0422231 Ga0501071_0422231_239_976 245
3 3300049824 Ga0501045_0428244 Ga0501045_0428244_236_973 245
4 3300054114 Ga0501084_0390190 Ga0501084_0390190_34_771 245
5 3300044673 Ga0453683_0137361 Ga0453683_0137361_314_1084 256
6 3300049743 Ga0501081_0521071 Ga0501081_0521071_81_851 256
7 3300035398 Ga0316574_0375002 Ga0316574_0375002_71_853 260
8 3300006173 Ga0070716_100021235 Ga0070716_1000212353 261
9 3300025939 Ga0207665_10030999 Ga0207665_100309994 261
10 3300036647 Ga0316582_0423883 Ga0316582_0423883_18_812 263
11 iso_pu_bacteria 2648501241 2649121873 263
12 iso_pu_bacteria 2651869818 2652975158 263
13 3300049573 Ga0501037_0055233 Ga0501037_0055233_449_1294 269
14 3300049575 Ga0501039_0025012 Ga0501039_0025012_169_1014 269
15 3300049577 Ga0501041_0002632 Ga0501041_0002632_5745_6590 269
16 3300049580 Ga0501046_0060026 Ga0501046_0060026_107_952 269
17 3300049587 Ga0501071_0052834 Ga0501071_0052834_44_889 269
18 3300049591 Ga0501075_0148394 Ga0501075_0148394_835_1680 269
19 3300049592 Ga0501076_0027502 Ga0501076_0027502_112_957 269
20 3300049741 Ga0501079_0009451 Ga0501079_0009451_3649_4494 269
21 3300049822 Ga0501035_0265766 Ga0501035_0265766_526_1371 269
22 3300060353 Ga0501082_0030740 Ga0501082_0030740_1642_2487 269
23 3300006871 Ga0075434_100029440 Ga0075434_1000294406 274
24 3300050512 nmdc:mga0n895_28126_c2 nmdc:mga0n895_28126_c2_1665_2489 274
25 3300005563 Ga0068855_100083981 Ga0068855_1000839813 277
26 3300009093 Ga0105240_10119301 Ga0105240_101193012 277
27 3300031727 Ga0316576_10191608 Ga0316576_101916081 277
28 3300044673 Ga0453683_0026517 Ga0453683_0026517_847_1710 277
29 3300044712 Ga0453684_0337652 Ga0453684_0337652_13_876 277
30 3300045051 Ga0451576_0000386 Ga0451576_0000386_69891_70754 277
31 3300038726 Ga0400490_35079 Ga0400490_35079_3285_4127 280
32 3300042876 Ga0451577_0287443 Ga0451577_0287443_15_857 280
33 3300027462 Ga0210000_1009923 Ga0210000_10099232 284
34 3300031665 Ga0316575_10025630 Ga0316575_100256302 284
35 3300035398 Ga0316574_0005434 Ga0316574_0005434_2939_3793 284
36 3300031665 Ga0316575_10001896 Ga0316575_100018964 285
37 3300031691 Ga0316579_10032957 Ga0316579_100329572 285
38 3300031728 Ga0316578_10028467 Ga0316578_100284673 285
39 3300038726 Ga0400490_17397 Ga0400490_17397_1213_2070 285
40 3300031665 Ga0316575_10001197 Ga0316575_100011975 286
41 3300031665 Ga0316575_10017932 Ga0316575_100179322 286
42 3300031665 Ga0316575_10030800 Ga0316575_100308002 286
43 3300031691 Ga0316579_10000073 Ga0316579_1000007320 286
44 3300031691 Ga0316579_10003718 Ga0316579_100037181 286
45 3300031691 Ga0316579_10041909 Ga0316579_100419091 286
46 3300031691 Ga0316579_10108384 Ga0316579_101083842 286
47 3300031691 Ga0316579_10116246 Ga0316579_101162461 286
48 3300031691 Ga0316579_10138208 Ga0316579_101382082 286
49 3300031727 Ga0316576_10000495 Ga0316576_1000049519 286
50 3300031727 Ga0316576_10013122 Ga0316576_100131222 286
51 3300031727 Ga0316576_10023582 Ga0316576_100235824 286
52 3300031727 Ga0316576_10069039 Ga0316576_100690393 286
53 3300031727 Ga0316576_10069139 Ga0316576_100691392 286
54 3300031728 Ga0316578_10001107 Ga0316578_100011078 286
55 3300031728 Ga0316578_10006054 Ga0316578_100060542 286
56 3300031728 Ga0316578_10089716 Ga0316578_100897162 286
57 3300031728 Ga0316578_10093162 Ga0316578_100931622 286
58 3300031728 Ga0316578_10118000 Ga0316578_101180002 286
59 3300031733 Ga0316577_10002013 Ga0316577_100020138 286
60 3300031733 Ga0316577_10060259 Ga0316577_100602592 286
61 3300031733 Ga0316577_10065802 Ga0316577_100658022 286
62 3300032133 Ga0316583_10003588 Ga0316583_100035883 286
63 3300032137 Ga0316585_10000059 Ga0316585_100000594 286
64 3300032137 Ga0316585_10009908 Ga0316585_100099082 286
65 3300032139 Ga0316580_10000017 Ga0316580_1000001724 286
66 3300032139 Ga0316580_10006304 Ga0316580_100063045 286
67 3300032168 Ga0316593_10002993 Ga0316593_100029931 286
68 3300032168 Ga0316593_10004979 Ga0316593_100049795 286
69 3300032168 Ga0316593_10043062 Ga0316593_100430622 286
70 3300033541 Ga0316596_1016911 Ga0316596_10169112 286
71 3300035083 Ga0373926_0017482 Ga0373926_0017482_351_1223 286
72 3300035170 Ga0373943_0116246 Ga0373943_0116246_27_899 286
73 3300035398 Ga0316574_0000146 Ga0316574_0000146_2323_3195 286
74 3300035398 Ga0316574_0036020 Ga0316574_0036020_535_1395 286
75 3300035398 Ga0316574_0072312 Ga0316574_0072312_1222_2085 286
76 3300035398 Ga0316574_0292747 Ga0316574_0292747_95_970 286
77 3300035695 Ga0373927_0079070 Ga0373927_0079070_135_1007 286
78 3300036647 Ga0316582_0045509 Ga0316582_0045509_1794_2660 286
79 3300036647 Ga0316582_0106672 Ga0316582_0106672_352_1224 286
80 3300036647 Ga0316582_0171156 Ga0316582_0171156_223_1089 286
81 3300036712 Ga0316584_0000512 Ga0316584_0000512_7969_8829 286
82 3300036712 Ga0316584_0009853 Ga0316584_0009853_3457_4329 286
83 3300036712 Ga0316584_0019830 Ga0316584_0019830_793_1656 286
84 3300036712 Ga0316584_0089313 Ga0316584_0089313_1288_2148 286
85 3300036712 Ga0316584_0203819 Ga0316584_0203819_378_1244 286
86 3300037068 Ga0373925_0003824 Ga0373925_0003824_1437_2309 286
87 3300037588 Ga0316581_0025580 Ga0316581_0025580_852_1712 286
88 3300038741 Ga0400488_47502 Ga0400488_47502_11_871 286
89 3300039110 Ga0400487_07502 Ga0400487_07502_10048_10908 286
90 3300046517 Ga0495630_0032437 Ga0495630_0032437_212_1084 286
91 3300005843 Ga0068860_100122829 Ga0068860_1001228292 287
92 3300031665 Ga0316575_10036862 Ga0316575_100368621 287
93 3300031727 Ga0316576_10207749 Ga0316576_102077492 287
94 3300032133 Ga0316583_10006635 Ga0316583_100066354 287
95 3300035398 Ga0316574_0021294 Ga0316574_0021294_2433_3296 287
96 3300035398 Ga0316574_0055384 Ga0316574_0055384_543_1409 287
97 3300036401 Ga0373937_0117911 Ga0373937_0117911_1148_2011 287
98 3300036647 Ga0316582_0247670 Ga0316582_0247670_188_1063 287
99 3300038725 Ga0400484_04996 Ga0400484_04996_2648_3511 287
100 3300038725 Ga0400484_07992 Ga0400484_07992_896_1759 287
101 3300038726 Ga0400490_48716 Ga0400490_48716_971_1834 287
102 3300038726 Ga0400490_49783 Ga0400490_49783_11445_12308 287
103 3300038726 Ga0400490_50756 Ga0400490_50756_412_1275 287
104 3300038726 Ga0400490_55601 Ga0400490_55601_11114_11977 287
105 3300038727 Ga0400491_11027 Ga0400491_11027_1072_1935 287
106 3300038735 Ga0400485_20426 Ga0400485_20426_1343_2206 287
107 3300038741 Ga0400488_17573 Ga0400488_17573_1334_2197 287
108 3300038741 Ga0400488_62151 Ga0400488_62151_4940_5803 287
109 3300038742 Ga0400486_26995 Ga0400486_26995_4505_5368 287
110 3300039062 Ga0400483_048397 Ga0400483_048397_2695_3558 287
111 3300039062 Ga0400483_147650 Ga0400483_147650_2608_3471 287
112 3300039062 Ga0400483_266970 Ga0400483_266970_2893_3756 287
113 3300039062 Ga0400483_280548 Ga0400483_280548_1959_2822 287
114 3300039093 Ga0400489_37863 Ga0400489_37863_192_1055 287
115 3300039093 Ga0400489_69272 Ga0400489_69272_1440_2303 287
116 3300039110 Ga0400487_55644 Ga0400487_55644_19848_20711 287
117 3300039110 Ga0400487_63125 Ga0400487_63125_8769_9632 287
118 3300042876 Ga0451577_0059719 Ga0451577_0059719_849_1754 287
119 3300005295 Ga0065707_10003144 Ga0065707_100031443 288
120 3300005295 Ga0065707_10084018 Ga0065707_100840185 288
121 3300031733 Ga0316577_10000469 Ga0316577_1000046911 288
122 3300031733 Ga0316577_10113716 Ga0316577_101137162 288
123 3300032133 Ga0316583_10015073 Ga0316583_100150733 288
124 3300032137 Ga0316585_10000058 Ga0316585_100000589 288
125 3300032139 Ga0316580_10016035 Ga0316580_100160352 288
126 3300035089 Ga0373944_0035159 Ga0373944_0035159_222_1133 288
127 3300035398 Ga0316574_0001687 Ga0316574_0001687_9268_10137 288
128 3300036647 Ga0316582_0103745 Ga0316582_0103745_101_970 288
129 3300036712 Ga0316584_0008283 Ga0316584_0008283_5406_6293 288
130 3300037068 Ga0373925_0003940 Ga0373925_0003940_3366_4277 288
131 3300049578 Ga0501042_0123688 Ga0501042_0123688_137_1042 288

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04116

FA_hydroxylase

Fatty acid hydroxylase

109

246

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zr0-assembly1.cif.gz_A full length scs7p (only hydroxylase domain visible) 0.3093 90 244
5llm-assembly1.cif.gz_A structure of the thermostabilized eaat1 cryst mutant in complex with l-asp and the allosteric inhibitor ucph101 0.2534 2 153
7cz9-assembly2.cif.gz_E crystal structure of multidrug efflux transporter oqxb from klebsiella pneumoniae 0.2397 4 195
5llu-assembly1.cif.gz_A structure of the thermostabilized eaat1 cryst-ii mutant in complex with l-asp 0.2285 1 177
7z6m-assembly1.cif.gz_A-2 crystal structure of zn2+-transporter bbzip in a cadmium bound state 0.2268 13 177
ID Description Score Start End Superfamily
af_B7F8I2_100_539_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3014 7 177 1.20.1250.20
af_Q9VJ63_40_279_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2958 25 184 1.20.1250.20
af_Q9FNC1_271_433_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2715 4 177 1.20.1250.20
af_Q15761_39_432_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2701 2 156 1.20.1070.10
af_Q2G199_259_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.2641 7 174 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1G3BQK1-F1-model_v4 Fatty acid hydroxylase 0.9912 1 236 GO:0005506
GO:0008610
GO:0016020
GO:0016491
AF-A0A1S2WX64-F1-model_v4 Fatty acid hydroxylase superfamily protein 0.9886 9 200 GO:0005506
GO:0008610
GO:0016020
GO:0016491
AF-A0A1G3BQK1-F1-model_v4 Fatty acid hydroxylase 0.9871 1 236 GO:0005506
GO:0008610
GO:0016020
GO:0016491
AF-A0A7C2I8D1-F1-model_v4 Sterol desaturase family protein 0.9843 3 270 GO:0005506
GO:0008610
GO:0016020
GO:0016491
AF-A0A3M2BZD8-F1-model_v4 Sterol desaturase family protein 0.9836 10 270 GO:0005506
GO:0006643
GO:0008610
GO:0016020
GO:0050479

Feature Viewer

pLDDT pTM Quality
88.65 0.87 High
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Predicted Structure (AlphaFold2)

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