F148495

General Info

Members Datasets Scaffolds Average Seq Length
131 93 131 117

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100751529|Ga0070697_1007515291
Length 140
Sequence VTDETKSQNHGAITSHINIDVAQKMDFTVEFYVNATGRSPVQEFLEGLKLTDANDFAAVVAGLAKLQNRRYHREPLSKSLGNGLFELRHVGKLNTRVLWFFMKGRRIIAVHGVRNKGQTIAGGDLKTATERMTDWLKRKK

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
35 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
36 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
38 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
39 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
56 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
57 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
58 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
59 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
60 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
69 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
70 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
71 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
79 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
80 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
81 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
85 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
86 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
87 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
88 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
89 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
90 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_11021441 3300005293 Unclassified 539
2 Ga0070680_100496748 3300005336 Bacteria 1044
3 Ga0070682_100039366 3300005337 Bacteria 2905
4 Ga0070689_100750605 3300005340 Bacteria 855
5 Ga0070687_100158295 3300005343 Bacteria 1336
6 Ga0070714_100211895 3300005435 Unclassified 1776
7 Ga0070705_100000159 3300005440 Bacteria 39496
8 Ga0070708_100095801 3300005445 Unclassified 2710
9 Ga0070681_10231261 3300005458 Bacteria 1763
10 Ga0070681_10914336 3300005458 Bacteria 796
11 Ga0070706_100021294 3300005467 Bacteria 5972
12 Ga0070707_101172852 3300005468 Unclassified 734
13 Ga0070698_100872488 3300005471 Bacteria 845
14 Ga0070698_101655199 3300005471 Unclassified 592
15 Ga0070679_102134560 3300005530 Unclassified 510
16 Ga0070697_100431642 3300005536 Unclassified 1146
17 Ga0070697_100751529 3300005536 Unclassified 862
18 Ga0070697_101252607 3300005536 Bacteria 661
19 Ga0070697_101907034 3300005536 Bacteria 532
20 Ga0070695_100849896 3300005545 Unclassified 734
21 Ga0070717_10587243 3300006028 Unclassified 1010
22 Ga0070715_10672115 3300006163 Unclassified 615
23 Ga0070716_101099809 3300006173 Unclassified 634
24 Ga0075430_100068001 3300006846 Bacteria 2989
25 Ga0075430_100521323 3300006846 Unclassified 980
26 Ga0075434_101763443 3300006871 Bacteria 626
27 Ga0075434_102388396 3300006871 Unclassified 531
28 Ga0075436_100117261 3300006914 Bacteria 1861
29 Ga0075436_100601723 3300006914 Unclassified 810
30 Ga0075435_100238207 3300007076 Bacteria 1547
31 Ga0075435_100623134 3300007076 Unclassified 936
32 Ga0099795_10322716 3300007788 Unclassified 684
33 Ga0111539_10510941 3300009094 Unclassified 1399
34 Ga0105245_10206606 3300009098 Unclassified 1888
35 Ga0114129_10045491 3300009147 Bacteria 6171
36 Ga0114129_10712610 3300009147 Unclassified 1289
37 Ga0105248_11910279 3300009177 Unclassified 674
38 Ga0105249_10383025 3300009553 Bacteria 1433
39 Ga0207684_10004269 3300025910 Bacteria 13547
40 Ga0207684_10018767 3300025910 Bacteria 5917
41 Ga0207707_10155428 3300025912 Bacteria 2000
42 Ga0207707_10196409 3300025912 Bacteria 1760
43 Ga0207662_10665231 3300025918 Unclassified 728
44 Ga0207664_10817781 3300025929 Unclassified 838
45 Ga0207665_10494748 3300025939 Bacteria 944
46 Ga0207665_11108767 3300025939 Unclassified 631
47 Ga0209984_1019399 3300027424 Unclassified 924
48 Ga0209971_1017491 3300027682 Unclassified 1699
49 Ga0209974_10001422 3300027876 Bacteria 8660
50 Ga0265326_10033813 3300028558 Unclassified 1455
51 Ga0265323_10066690 3300028653 Bacteria 1239
52 Ga0265323_10146977 3300028653 Bacteria 756
53 Ga0265336_10023197 3300028666 Bacteria 1971
54 Ga0265338_10011132 3300028800 Bacteria 10429
55 Ga0265338_10083820 3300028800 Bacteria 2664
56 Ga0265338_10103367 3300028800 Unclassified 2314
57 Ga0265338_10242050 3300028800 Bacteria 1335
58 Ga0265338_10958659 3300028800 Unclassified 580
59 Ga0265330_10023686 3300031235 Bacteria 2787
60 Ga0265320_10117603 3300031240 Bacteria 1214
61 Ga0265325_10336262 3300031241 Bacteria 669
62 Ga0265316_10014403 3300031344 Bacteria 6963
63 Ga0265316_10100409 3300031344 Unclassified 2200
64 Ga0265316_11137562 3300031344 Unclassified 541
65 Ga0307408_100267111 3300031548 Bacteria 1419
66 Ga0265313_10148611 3300031595 Bacteria 1003
67 Ga0316579_10009409 3300031691 Bacteria 4108
68 Ga0265342_10338487 3300031712 Unclassified 785
69 Ga0316576_10017985 3300031727 Bacteria 4817
70 Ga0307405_10169292 3300031731 Bacteria 1557
71 Ga0307413_10042620 3300031824 Bacteria 2669
72 Ga0307412_10237860 3300031911 Bacteria 1407
73 Ga0307409_100636448 3300031995 Bacteria 1059
74 Ga0307416_100518800 3300032002 Bacteria 1259
75 Ga0316585_10007729 3300032137 Bacteria 3106
76 Ga0316580_10070770 3300032139 Unclassified 1068
77 Ga0373954_0201652 3300035118 Bacteria 977
78 Ga0373955_0404096 3300035172 Bacteria 830
79 Ga0316574_0235686 3300035398 Bacteria 1170
80 Ga0373931_0798795 3300035691 Unclassified 629
81 Ga0373935_0034608 3300035692 Bacteria 3150
82 Ga0373935_0046242 3300035692 Unclassified 2748
83 Ga0373927_0006242 3300035695 Bacteria 8136
84 Ga0373947_0008742 3300035725 Bacteria 5823
85 Ga0373937_0162615 3300036401 Bacteria 2093
86 Ga0373937_1433009 3300036401 Bacteria 638
87 Ga0316582_0003081 3300036647 Bacteria 8057
88 Ga0316582_0015434 3300036647 Bacteria 4369
89 Ga0316584_0005339 3300036712 Bacteria 8611
90 Ga0373925_0006240 3300037068 Bacteria 8794
91 Ga0373925_1721316 3300037068 Bacteria 512
92 Ga0395900_0320330 3300037418 Bacteria 1531
93 Ga0395898_0454475 3300037466 Bacteria 1220
94 Ga0316581_0106410 3300037588 Bacteria 864
95 Ga0439435_0364845 3300042436 Bacteria 503
96 Ga0451577_0000283 3300042876 Bacteria 98406
97 Ga0451577_0001745 3300042876 Bacteria 28026
98 Ga0451577_0018584 3300042876 Bacteria 6402
99 Ga0451577_0179651 3300042876 Bacteria 1908
100 Ga0453683_0003254 3300044673 Bacteria 12075
101 Ga0453683_0004956 3300044673 Bacteria 9358
102 Ga0453683_0014188 3300044673 Bacteria 5179
103 Ga0453684_0000233 3300044712 Bacteria 240186
104 Ga0453684_0000238 3300044712 Bacteria 236003
105 Ga0453684_0001028 3300044712 Bacteria 89189
106 Ga0453684_0027629 3300044712 Bacteria 8126
107 Ga0453684_0180702 3300044712 Bacteria 2477
108 Ga0453684_0299754 3300044712 Bacteria 1827
109 Ga0453684_1129066 3300044712 Bacteria 827
110 Ga0451576_0025236 3300045051 Bacteria 6406
111 Ga0451576_0060803 3300045051 Bacteria 3940
112 Ga0495629_0396900 3300046459 Unclassified 938
113 Ga0495630_0242126 3300046517 Unclassified 1378
114 Ga0495630_0467881 3300046517 Bacteria 966
115 Ga0495666_0011267 3300046526 Unclassified 4460
116 Ga0495640_0702901 3300046533 Bacteria 606
117 Ga0495586_0306038 3300046535 Bacteria 911
118 Ga0495587_0779301 3300046536 Bacteria 523
119 Ga0495634_0256709 3300046642 Bacteria 1068
120 Ga0495613_0094525 3300046689 Bacteria 2163
121 Ga0495624_0494022 3300046690 Unclassified 732
122 Ga0495680_0516035 3300047322 Bacteria 809
123 Ga0501298_032866 3300049521 Unclassified 1025
124 Ga0501235_064359 3300049669 Unclassified 862
125 Ga0501225_0061154 3300049705 Bacteria 1060
126 nmdc:mga0qj67_306640_c1 3300050509 Bacteria 1286
127 nmdc:mga06r32_443413_c1 3300050510 Bacteria 1278
128 nmdc:mga0n895_135373_c1 3300050512 Unclassified 2490
129 nmdc:mga0n895_1800972_c1 3300050512 Unclassified 573
130 nmdc:mga0rr50_455040_c1 3300050513 Unclassified 1085
131 nmdc:mga08x19_44222_c1 3300050514 Bacteria 2843

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005343 Ga0070687_100158295 Ga0070687_1001582952 115
2 3300005440 Ga0070705_100000159 Ga0070705_10000015930 115
3 3300005530 Ga0070679_102134560 Ga0070679_1021345601 115
4 3300006028 Ga0070717_10587243 Ga0070717_105872432 115
5 3300006914 Ga0075436_100117261 Ga0075436_1001172612 115
6 3300025918 Ga0207662_10665231 Ga0207662_106652312 115
7 3300046459 Ga0495629_0396900 Ga0495629_0396900_490_837 115
8 3300050514 nmdc:mga08x19_44222_c1 nmdc:mga08x19_44222_c1_1360_1707 115
9 3300005336 Ga0070680_100496748 Ga0070680_1004967482 116
10 3300005337 Ga0070682_100039366 Ga0070682_1000393665 116
11 3300005458 Ga0070681_10914336 Ga0070681_109143362 116
12 3300005467 Ga0070706_100021294 Ga0070706_1000212942 116
13 3300005468 Ga0070707_101172852 Ga0070707_1011728522 116
14 3300005536 Ga0070697_100751529 Ga0070697_1007515291 116
15 3300005545 Ga0070695_100849896 Ga0070695_1008498961 116
16 3300009098 Ga0105245_10206606 Ga0105245_102066061 116
17 3300009147 Ga0114129_10712610 Ga0114129_107126103 116
18 3300009177 Ga0105248_11910279 Ga0105248_119102791 116
19 3300025910 Ga0207684_10004269 Ga0207684_100042692 116
20 3300025910 Ga0207684_10018767 Ga0207684_100187672 116
21 3300025912 Ga0207707_10196409 Ga0207707_101964092 116
22 3300035692 Ga0373935_0046242 Ga0373935_0046242_913_1275 116
23 3300035695 Ga0373927_0006242 Ga0373927_0006242_1235_1597 116
24 3300035725 Ga0373947_0008742 Ga0373947_0008742_3805_4155 116
25 3300037068 Ga0373925_0006240 Ga0373925_0006240_6237_6599 116
26 3300037418 Ga0395900_0320330 Ga0395900_0320330_749_1099 116
27 3300037466 Ga0395898_0454475 Ga0395898_0454475_492_842 116
28 3300044673 Ga0453683_0004956 Ga0453683_0004956_382_732 116
29 3300044712 Ga0453684_0180702 Ga0453684_0180702_2051_2401 116
30 3300044712 Ga0453684_1129066 Ga0453684_1129066_289_639 116
31 3300046517 Ga0495630_0242126 Ga0495630_0242126_173_523 116
32 3300046526 Ga0495666_0011267 Ga0495666_0011267_2700_3062 116
33 3300005293 Ga0065715_11021441 Ga0065715_110214411 117
34 3300005340 Ga0070689_100750605 Ga0070689_1007506052 117
35 3300005435 Ga0070714_100211895 Ga0070714_1002118953 117
36 3300005445 Ga0070708_100095801 Ga0070708_1000958015 117
37 3300005458 Ga0070681_10231261 Ga0070681_102312613 117
38 3300005471 Ga0070698_100872488 Ga0070698_1008724881 117
39 3300005471 Ga0070698_101655199 Ga0070698_1016551991 117
40 3300005536 Ga0070697_100431642 Ga0070697_1004316421 117
41 3300005536 Ga0070697_101252607 Ga0070697_1012526072 117
42 3300005536 Ga0070697_101907034 Ga0070697_1019070341 117
43 3300006163 Ga0070715_10672115 Ga0070715_106721151 117
44 3300006173 Ga0070716_101099809 Ga0070716_1010998091 117
45 3300006846 Ga0075430_100068001 Ga0075430_1000680012 117
46 3300006846 Ga0075430_100521323 Ga0075430_1005213232 117
47 3300006871 Ga0075434_101763443 Ga0075434_1017634432 117
48 3300006871 Ga0075434_102388396 Ga0075434_1023883962 117
49 3300006914 Ga0075436_100601723 Ga0075436_1006017231 117
50 3300007076 Ga0075435_100238207 Ga0075435_1002382073 117
51 3300007076 Ga0075435_100623134 Ga0075435_1006231342 117
52 3300007788 Ga0099795_10322716 Ga0099795_103227162 117
53 3300009094 Ga0111539_10510941 Ga0111539_105109412 117
54 3300009147 Ga0114129_10045491 Ga0114129_100454916 117
55 3300009553 Ga0105249_10383025 Ga0105249_103830252 117
56 3300025912 Ga0207707_10155428 Ga0207707_101554282 117
57 3300025929 Ga0207664_10817781 Ga0207664_108177812 117
58 3300025939 Ga0207665_10494748 Ga0207665_104947482 117
59 3300025939 Ga0207665_11108767 Ga0207665_111087671 117
60 3300027424 Ga0209984_1019399 Ga0209984_10193992 117
61 3300027682 Ga0209971_1017491 Ga0209971_10174912 117
62 3300027876 Ga0209974_10001422 Ga0209974_100014223 117
63 3300028558 Ga0265326_10033813 Ga0265326_100338133 117
64 3300028653 Ga0265323_10066690 Ga0265323_100666902 117
65 3300028653 Ga0265323_10146977 Ga0265323_101469772 117
66 3300028666 Ga0265336_10023197 Ga0265336_100231971 117
67 3300028800 Ga0265338_10011132 Ga0265338_1001113212 117
68 3300028800 Ga0265338_10083820 Ga0265338_100838202 117
69 3300028800 Ga0265338_10103367 Ga0265338_101033675 117
70 3300028800 Ga0265338_10242050 Ga0265338_102420502 117
71 3300028800 Ga0265338_10958659 Ga0265338_109586591 117
72 3300031235 Ga0265330_10023686 Ga0265330_100236862 117
73 3300031240 Ga0265320_10117603 Ga0265320_101176033 117
74 3300031241 Ga0265325_10336262 Ga0265325_103362621 117
75 3300031344 Ga0265316_10014403 Ga0265316_100144035 117
76 3300031344 Ga0265316_10100409 Ga0265316_101004092 117
77 3300031344 Ga0265316_11137562 Ga0265316_111375622 117
78 3300031548 Ga0307408_100267111 Ga0307408_1002671111 117
79 3300031595 Ga0265313_10148611 Ga0265313_101486112 117
80 3300031691 Ga0316579_10009409 Ga0316579_100094092 117
81 3300031712 Ga0265342_10338487 Ga0265342_103384871 117
82 3300031727 Ga0316576_10017985 Ga0316576_100179859 117
83 3300031731 Ga0307405_10169292 Ga0307405_101692922 117
84 3300031824 Ga0307413_10042620 Ga0307413_100426202 117
85 3300031911 Ga0307412_10237860 Ga0307412_102378601 117
86 3300031995 Ga0307409_100636448 Ga0307409_1006364481 117
87 3300032002 Ga0307416_100518800 Ga0307416_1005188002 117
88 3300032137 Ga0316585_10007729 Ga0316585_100077296 117
89 3300032139 Ga0316580_10070770 Ga0316580_100707703 117
90 3300035118 Ga0373954_0201652 Ga0373954_0201652_262_615 117
91 3300035172 Ga0373955_0404096 Ga0373955_0404096_266_619 117
92 3300035398 Ga0316574_0235686 Ga0316574_0235686_67_420 117
93 3300035691 Ga0373931_0798795 Ga0373931_0798795_214_567 117
94 3300035692 Ga0373935_0034608 Ga0373935_0034608_843_1196 117
95 3300036401 Ga0373937_0162615 Ga0373937_0162615_1203_1556 117
96 3300036401 Ga0373937_1433009 Ga0373937_1433009_225_578 117
97 3300036647 Ga0316582_0003081 Ga0316582_0003081_4516_4869 117
98 3300036647 Ga0316582_0015434 Ga0316582_0015434_3477_3830 117
99 3300036712 Ga0316584_0005339 Ga0316584_0005339_5700_6053 117
100 3300037068 Ga0373925_1721316 Ga0373925_1721316_101_454 117
101 3300037588 Ga0316581_0106410 Ga0316581_0106410_22_375 117
102 3300042436 Ga0439435_0364845 Ga0439435_0364845_50_403 117
103 3300042876 Ga0451577_0000283 Ga0451577_0000283_27456_27809 117
104 3300042876 Ga0451577_0001745 Ga0451577_0001745_25469_25822 117
105 3300042876 Ga0451577_0018584 Ga0451577_0018584_5155_5508 117
106 3300042876 Ga0451577_0179651 Ga0451577_0179651_821_1174 117
107 3300044673 Ga0453683_0003254 Ga0453683_0003254_2167_2520 117
108 3300044673 Ga0453683_0014188 Ga0453683_0014188_4721_5074 117
109 3300044712 Ga0453684_0000233 Ga0453684_0000233_166949_167302 117
110 3300044712 Ga0453684_0000238 Ga0453684_0000238_63177_63530 117
111 3300044712 Ga0453684_0001028 Ga0453684_0001028_9282_9635 117
112 3300044712 Ga0453684_0027629 Ga0453684_0027629_1507_1860 117
113 3300044712 Ga0453684_0299754 Ga0453684_0299754_474_827 117
114 3300045051 Ga0451576_0025236 Ga0451576_0025236_1016_1369 117
115 3300045051 Ga0451576_0060803 Ga0451576_0060803_814_1167 117
116 3300046517 Ga0495630_0467881 Ga0495630_0467881_487_840 117
117 3300046533 Ga0495640_0702901 Ga0495640_0702901_12_365 117
118 3300046535 Ga0495586_0306038 Ga0495586_0306038_150_503 117
119 3300046536 Ga0495587_0779301 Ga0495587_0779301_123_476 117
120 3300046642 Ga0495634_0256709 Ga0495634_0256709_343_696 117
121 3300046689 Ga0495613_0094525 Ga0495613_0094525_807_1160 117
122 3300046690 Ga0495624_0494022 Ga0495624_0494022_289_642 117
123 3300047322 Ga0495680_0516035 Ga0495680_0516035_164_517 117
124 3300049521 Ga0501298_032866 Ga0501298_032866_291_644 117
125 3300049669 Ga0501235_064359 Ga0501235_064359_200_553 117
126 3300049705 Ga0501225_0061154 Ga0501225_0061154_207_560 117
127 3300050509 nmdc:mga0qj67_306640_c1 nmdc:mga0qj67_306640_c1_466_819 117
128 3300050510 nmdc:mga06r32_443413_c1 nmdc:mga06r32_443413_c1_265_618 117
129 3300050512 nmdc:mga0n895_135373_c1 nmdc:mga0n895_135373_c1_380_733 117
130 3300050512 nmdc:mga0n895_1800972_c1 nmdc:mga0n895_1800972_c1_189_542 117
131 3300050513 nmdc:mga0rr50_455040_c1 nmdc:mga0rr50_455040_c1_470_823 117

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05973

Gp49

Phage derived protein Gp49-like (DUF891)

44

133

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
7awk-assembly1.cif.gz_A crystal structure of the higb1 toxin mutant k95a from mycobacterium tuberculosis (rv1955) 0.8362 4 113
6af3-assembly2.cif.gz_E toxin-antitoxin module from streptococcus pneumoniae 0.7825 3 115
5wg6-assembly1.cif.gz_B human polycomb repressive complex 2 in complex with gsk126 inhibitor 0.7745 60 93
3ijc-assembly1.cif.gz_A crystal structure of eed in complex with ndsb-195 0.7736 60 93
6v3x-assembly1.cif.gz_A crystal structure of eed in complex with pali1-k1241me3 peptide 0.7667 60 93
ID Description Score Start End Superfamily
af_P9WJA5_1_125_3.30.2310.20 Alpha Beta;2-Layer Sandwich;YaeB-like fold;RelE-like 0.834 2 113 3.30.2310.20
af_B5DF02_74_441_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.8242 60 91 2.130.10.10
af_A0A1D6L259_83_289_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7975 59 91 2.130.10.10
af_O74865_5_324_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7955 59 91 2.130.10.10
af_O53332_11_104_3.30.2310.20 Alpha Beta;2-Layer Sandwich;YaeB-like fold;RelE-like 0.7828 20 108 3.30.2310.20
ID Description Score Start End GO Terms
AF-A0A3D0T5B9-F1-model_v4 Type II toxin-antitoxin system RelE/ParE family toxin 0.971 1 114
AF-A0A0S8CEL0-F1-model_v4 Addiction module toxin RelE 0.9683 1 117
AF-A0A399ZZR9-F1-model_v4 Type II toxin-antitoxin system RelE/ParE family toxin 0.9567 2 115
AF-A0A7V9FBD1-F1-model_v4 Type II toxin-antitoxin system RelE/ParE family toxin 0.9455 1 114
AF-A0A1F7YPC5-F1-model_v4 Addiction module toxin RelE 0.9417 1 113

Feature Viewer

pLDDT pTM Quality
92.71 0.87 High
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Predicted Structure (AlphaFold2)

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