F143317

General Info

Members Datasets Scaffolds Average Seq Length
129 106 258 187

Family's Representative Sequence

Representative Sequence 3300049590|Ga0501074_0005839|Ga0501074_0005839_3419_4093
Length 224
Sequence LRDRTFGLDLAPCFQHLIEETGGGRRTRILPHLLPERIVVTAVASSTARGIAPALRRLYLVRFGFAIVWALLLFATKSDLGPASITLLVLYPLFDVAAAVVDTRSSGGTGPARGLQVNIAISLLAAIGLAIACGSGVPDVLRVWGGWAIVSGLVQLIVGAARRTMGGQWPMILSGGISVLAGASFITSASAANPSLANLAGYAVLGGIFFLVSALRLGRAAKER

Samples

Sample ID Description Type Environment
1 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
2 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
13 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
14 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
26 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
27 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
30 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
31 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
32 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
33 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
34 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
35 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
36 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
39 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
40 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
41 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
42 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
43 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
44 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
45 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
46 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
47 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
48 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
49 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
51 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
54 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
58 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
62 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
63 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
64 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
65 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
67 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
68 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
69 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
70 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
71 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
72 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
73 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
74 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
75 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
76 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
77 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
78 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
79 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
80 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
81 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
82 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
83 2808606394 Promicromonospora sp. C35 Isolate Unclassified
84 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
85 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
86 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
87 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
88 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
89 2862574272 Streptomyces sp. AcE210 Isolate Nodule
90 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
91 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
92 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
93 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
94 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
95 2891562705 Microbispora tritici MT50 Isolate Unclassified
96 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
97 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
98 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
99 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
100 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
101 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
102 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
103 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
104 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
105 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
106 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.42
Metatranscriptomes 0
Isolates 25.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.98
Nodule 2.33
Rhizoplane 0
Rhizosphere 70.54
Stem 0
Stem Tuber 0
Unclassified 2.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501074_0005839 3300049590 Bacteria 8878
2 Ga0070682_100252893 3300005337 Unclassified 1271
3 Ga0068868_100502356 3300005338 Unclassified 1062
4 Ga0070668_100000848 3300005347 Bacteria 21179
5 Ga0070668_100482386 3300005347 Bacteria 1071
6 Ga0070671_100000434 3300005355 Bacteria 29093
7 Ga0070667_100156287 3300005367 Bacteria 2006
8 Ga0070714_100029071 3300005435 Bacteria 4592
9 Ga0068853_100918675 3300005539 Bacteria 841
10 Ga0070665_100659281 3300005548 Bacteria 1059
11 Ga0068856_101520787 3300005614 Bacteria 683
12 Ga0081455_10080173 3300005937 Bacteria 2677
13 Ga0075365_10022447 3300006038 Bacteria 3954
14 Ga0075364_10074676 3300006051 Bacteria 2236
15 Ga0075433_10549013 3300006852 Bacteria 1016
16 Ga0105245_10194174 3300009098 Bacteria 1946
17 Ga0207688_10474351 3300025901 Bacteria 782
18 Ga0207687_10210785 3300025927 Unclassified 1524
19 Ga0207664_10080717 3300025929 Bacteria 2645
20 Ga0207644_10001028 3300025931 Bacteria 17850
21 Ga0207668_10004243 3300025972 Bacteria 8405
22 Ga0207668_11377648 3300025972 Bacteria 636
23 Ga0207658_10195922 3300025986 Bacteria 1683
24 Ga0207677_10126984 3300026023 Bacteria 1929
25 Ga0207677_10446422 3300026023 Bacteria 1107
26 Ga0207678_10007552 3300026067 Bacteria 9611
27 Ga0307515_10109584 3300028794 Bacteria 3241
28 Ga0307511_10000191 3300030521 Bacteria 60992
29 Ga0316176_1220848 3300030732 Bacteria 3008
30 Ga0316179_1011718 3300030734 Bacteria 1232
31 Ga0307513_10012209 3300031456 Bacteria 10620
32 Ga0307513_10500632 3300031456 Bacteria 932
33 Ga0307508_10036652 3300031616 Bacteria 4415
34 Ga0307413_10298453 3300031824 Bacteria 1221
35 Ga0307407_10203276 3300031903 Bacteria 1329
36 Ga0307409_100182548 3300031995 Bacteria 1859
37 Ga0307414_10241670 3300032004 Bacteria 1495
38 Ga0307507_10048917 3300033179 Bacteria 4106
39 Ga0373951_0000035 3300035091 Bacteria 52707
40 Ga0451853_1815837 3300041512 Bacteria 6246
41 Ga0439449_0058246 3300042007 Bacteria 1426
42 Ga0450903_042656 3300042138 Bacteria 670
43 Ga0466972_0053726 3300044658 Bacteria 1939
44 Ga0466965_0020419 3300044683 Bacteria 3184
45 Ga0466965_0026435 3300044683 Bacteria 2813
46 Ga0466965_0027498 3300044683 Bacteria 2762
47 Ga0466965_0231567 3300044683 Bacteria 987
48 Ga0466966_0165767 3300044684 Bacteria 1344
49 Ga0466961_0045545 3300044693 Bacteria 2807
50 Ga0466963_0006159 3300044694 Bacteria 7081
51 Ga0466963_0024343 3300044694 Bacteria 3854
52 Ga0466968_0014908 3300044735 Bacteria 3076
53 Ga0466968_0205915 3300044735 Bacteria 923
54 Ga0466970_0037333 3300044765 Bacteria 2575
55 Ga0466970_0052431 3300044765 Bacteria 2177
56 Ga0466959_0663012 3300045049 Bacteria 700
57 Ga0466967_0007275 3300045976 Bacteria 7967
58 Ga0466967_0217999 3300045976 Bacteria 1812
59 Ga0496121_0008850 3300048924 Bacteria 11725
60 Ga0501032_0693628 3300049569 Bacteria 645
61 Ga0501033_0345666 3300049570 Bacteria 1042
62 Ga0501034_0010311 3300049571 Bacteria 9742
63 Ga0501034_0152018 3300049571 Bacteria 2290
64 Ga0501034_0455110 3300049571 Bacteria 1197
65 Ga0501036_0001883 3300049572 Bacteria 16281
66 Ga0501036_0110280 3300049572 Bacteria 2325
67 Ga0501036_0159377 3300049572 Bacteria 1903
68 Ga0501037_0016085 3300049573 Bacteria 5505
69 Ga0501037_0316976 3300049573 Bacteria 1080
70 Ga0501038_0001607 3300049574 Bacteria 20981
71 Ga0501038_0038602 3300049574 Bacteria 4181
72 Ga0501038_0105189 3300049574 Bacteria 2344
73 Ga0501039_0242514 3300049575 Bacteria 1417
74 Ga0501039_0301422 3300049575 Bacteria 1260
75 Ga0501039_0542558 3300049575 Bacteria 912
76 Ga0501042_0003389 3300049578 Bacteria 10000
77 Ga0501043_0004569 3300049579 Bacteria 11237
78 Ga0501043_0038528 3300049579 Bacteria 3758
79 Ga0501043_0240720 3300049579 Bacteria 1395
80 Ga0501046_0255431 3300049580 Bacteria 1289
81 Ga0501047_0193264 3300049581 Bacteria 1898
82 Ga0501048_0002341 3300049582 Bacteria 14459
83 Ga0501069_0273411 3300049585 Bacteria 988
84 Ga0501073_0175924 3300049589 Bacteria 1481
85 Ga0501076_0422497 3300049592 Bacteria 1097
86 Ga0501080_0420283 3300049742 Bacteria 1201
87 Ga0501035_0004509 3300049822 Bacteria 13214
88 Ga0501044_0011768 3300049823 Bacteria 9478
89 nmdc:mga03n38_155924_c1 3300050490 Bacteria 1152
90 nmdc:mga00v17_60264_c1 3300050491 Bacteria 2330
91 nmdc:mga0yw44_174670_c1 3300050492 Bacteria 1412
92 nmdc:mga0yw44_374448_c1 3300050492 Bacteria 961
93 Ga0500644_0004016 3300053088 Bacteria 3662
94 Ga0500650_0191369 3300053098 Bacteria 934
95 Ga0500621_053474 3300053126 Bacteria 1633
96 Ga0466962_0075763 3300061719 Bacteria 1608
97 2676202742 2675902999 Bacteria 9438463
98 2738694461 2738541272 Bacteria 6848551
99 2739323939 2738543027 Bacteria 6409078
100 2739606850 2739367654 Bacteria 6049412
101 2753075435 2751185734 Bacteria 8863695
102 2760305263 2758568522 Bacteria 5953541
103 2760623141 2758568621 Bacteria 5967089
104 2774847318 2773857921 Bacteria 9435764
105 2791916947 2791354901 Bacteria 8322202
106 2809025716 2808606394 Bacteria 6248540
107 2809193892 2808606439 Bacteria 5952208
108 2816422691 2816332119 Bacteria 8120218
109 2816509883 2816332139 Bacteria 9138787
110 2856746254 2856741275 Bacteria 8096094
111 2862296839 2862290372 Bacteria 7471434
112 2862582195 2862574272 Bacteria 10567477
113 2867314122 2867312974 Bacteria 7058875
114 2867321427 2867319477 Bacteria 7069771
115 2870722244 2870721527 Bacteria 9689237
116 2877676723 2877676314 Bacteria 9512378
117 2891399262 2891395885 Bacteria 9251614
118 2891563738 2891562705 Bacteria 8039471
119 2895435740 2895427314 Bacteria 13147766
120 2912727535 2912723979 Bacteria 8557534
121 2915770853 2915768154 Bacteria 8424322
122 2929222806 2929219909 Bacteria 6984360
123 2954720700 2954711539 Bacteria 10867210
124 2954730249 2954721474 Bacteria 10456478
125 2954731788 2954731030 Bacteria 10243860
126 2954748966 2954740390 Bacteria 10229294
127 2954750500 2954749733 Bacteria 10366972
128 8047712018 8047710418 Bacteria 11023148
129 8054473784 8054472261 Bacteria 7464355
130 Ga0501074_0005839
131 Ga0070682_100252893
132 Ga0068868_100502356
133 Ga0070668_100000848
134 Ga0070668_100482386
135 Ga0070671_100000434
136 Ga0070667_100156287
137 Ga0070714_100029071
138 Ga0068853_100918675
139 Ga0070665_100659281
140 Ga0068856_101520787
141 Ga0081455_10080173
142 Ga0075365_10022447
143 Ga0075364_10074676
144 Ga0075433_10549013
145 Ga0105245_10194174
146 Ga0207688_10474351
147 Ga0207687_10210785
148 Ga0207664_10080717
149 Ga0207644_10001028
150 Ga0207668_10004243
151 Ga0207668_11377648
152 Ga0207658_10195922
153 Ga0207677_10126984
154 Ga0207677_10446422
155 Ga0207678_10007552
156 Ga0307515_10109584
157 Ga0307511_10000191
158 Ga0316176_1220848
159 Ga0316179_1011718
160 Ga0307513_10012209
161 Ga0307513_10500632
162 Ga0307508_10036652
163 Ga0307413_10298453
164 Ga0307407_10203276
165 Ga0307409_100182548
166 Ga0307414_10241670
167 Ga0307507_10048917
168 Ga0373951_0000035
169 Ga0451853_1815837
170 Ga0439449_0058246
171 Ga0450903_042656
172 Ga0466972_0053726
173 Ga0466965_0020419
174 Ga0466965_0026435
175 Ga0466965_0027498
176 Ga0466965_0231567
177 Ga0466966_0165767
178 Ga0466961_0045545
179 Ga0466963_0006159
180 Ga0466963_0024343
181 Ga0466968_0014908
182 Ga0466968_0205915
183 Ga0466970_0037333
184 Ga0466970_0052431
185 Ga0466959_0663012
186 Ga0466967_0007275
187 Ga0466967_0217999
188 Ga0496121_0008850
189 Ga0501032_0693628
190 Ga0501033_0345666
191 Ga0501034_0010311
192 Ga0501034_0152018
193 Ga0501034_0455110
194 Ga0501036_0001883
195 Ga0501036_0110280
196 Ga0501036_0159377
197 Ga0501037_0016085
198 Ga0501037_0316976
199 Ga0501038_0001607
200 Ga0501038_0038602
201 Ga0501038_0105189
202 Ga0501039_0242514
203 Ga0501039_0301422
204 Ga0501039_0542558
205 Ga0501042_0003389
206 Ga0501043_0004569
207 Ga0501043_0038528
208 Ga0501043_0240720
209 Ga0501046_0255431
210 Ga0501047_0193264
211 Ga0501048_0002341
212 Ga0501069_0273411
213 Ga0501073_0175924
214 Ga0501076_0422497
215 Ga0501080_0420283
216 Ga0501035_0004509
217 Ga0501044_0011768
218 nmdc:mga03n38_155924_c1
219 nmdc:mga00v17_60264_c1
220 nmdc:mga0yw44_174670_c1
221 nmdc:mga0yw44_374448_c1
222 Ga0500644_0004016
223 Ga0500650_0191369
224 Ga0500621_053474
225 Ga0466962_0075763
226 2676202742
227 2738694461
228 2739323939
229 2739606850
230 2753075435
231 2760305263
232 2760623141
233 2774847318
234 2791916947
235 2809025716
236 2809193892
237 2816422691
238 2816509883
239 2856746254
240 2862296839
241 2862582195
242 2867314122
243 2867321427
244 2870722244
245 2877676723
246 2891399262
247 2891563738
248 2895435740
249 2912727535
250 2915770853
251 2929222806
252 2954720700
253 2954730249
254 2954731788
255 2954748966
256 2954750500
257 8047712018
258 8054473784

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gtd-assembly1.cif.gz_B-2 2.4 angstrom crystal structure of fumarate hydratase from rickettsia prowazekii 0.5525 121 203
8gl3-assembly1.cif.gz_A de novo design of monomeric helical bundles for ph-controlled membrane lysis 0.5368 28 202
8kh4-assembly1.cif.gz_A cryo-em structure of the gpr161-gs complex 0.4849 28 203
1rke-assembly1.cif.gz_B human vinculin head (1-258) in complex with human vinculin tail (879-1066) 0.4655 100 203
7oqz-assembly1.cif.gz_A cryo-em structure of human tmem45a 0.463 27 210
ID Description Score Start End Superfamily
af_A8DY57_1_142_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5509 65 171 1.20.140.150
af_Q55C26_1_134_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5402 65 210 1.20.140.150
af_A0A0B4JCU6_1_139_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5395 37 171 1.20.140.150
af_A6NC51_4_206_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.5154 28 201 1.20.1070.10
af_Q57875_1_175_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4937 27 191 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2T0UX28-F1-model_v4 Integral membrane protein 0.9709 27 204 GO:0016020
AF-A0A3N9XPS4-F1-model_v4 Peptidase C31 domain-containing protein 0.9653 27 204 GO:0016020
AF-A0A4Q7X0A9-F1-model_v4 DUF308 domain-containing protein 0.9636 32 203 GO:0016020
AF-A0A848RZ09-F1-model_v4 Integral membrane protein 0.9538 28 203 GO:0016020
AF-A0A317M628-F1-model_v4 Uncharacterized protein 0.9458 27 203 GO:0016020

Map