F142555

General Info

Members Datasets Scaffolds Average Seq Length
129 59 129 114

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0771918|Ga0316584_0771918_259_642
Length 127
Sequence MADTYPPTPTNASGLSLQELIEGLHLYLVTEPREFERMIPGPVYASDLLSCVMTGAKQNGLWLTLQAHSNIVAVAALLDLCAVIITEDAAPEPETIEKANQQGVTLLLTRQPTYHLAGKLWEMGFRE

Samples

Sample ID Description Type Environment
1 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
28 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
36 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
37 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
38 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
39 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
40 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
41 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
42 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
43 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
44 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
45 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
46 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
47 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
48 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
49 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
50 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
51 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
55 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
57 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
58 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
59 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.9
Metatranscriptomes 3.1
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.78
Rhizosphere 96.9
Stem 0
Stem Tuber 0
Unclassified 2.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL3b_contig_3575053 2162886006 Unclassified 1570
2 SwRhRL2b_contig_1707652 2162886007 Unclassified 4561
3 Ga0065704_10070604 3300005289 Bacteria 19246
4 Ga0065704_10219477 3300005289 Bacteria 1058
5 Ga0065704_10282260 3300005289 Unclassified 920
6 Ga0065712_10168179 3300005290 Bacteria 1259
7 Ga0065712_10236624 3300005290 Unclassified 996
8 Ga0065707_10000453 3300005295 Bacteria 78440
9 Ga0065707_10000623 3300005295 Bacteria 15907
10 Ga0065707_10011313 3300005295 Bacteria 2238
11 Ga0065707_10084158 3300005295 Bacteria 7588
12 Ga0068869_100918713 3300005334 Bacteria 758
13 Ga0070687_100079533 3300005343 Bacteria 1785
14 Ga0070692_10666164 3300005345 Bacteria 696
15 Ga0070669_100578170 3300005353 Bacteria 939
16 Ga0070706_100563132 3300005467 Bacteria 1060
17 Ga0070698_100041528 3300005471 Bacteria 4721
18 Ga0070704_100423824 3300005549 Unclassified 1140
19 Ga0070664_100669593 3300005564 Bacteria 965
20 Ga0068857_100146731 3300005577 Bacteria 2135
21 Ga0068859_100135703 3300005617 Bacteria 2533
22 Ga0068859_100482595 3300005617 Bacteria 1335
23 Ga0068859_100663963 3300005617 Bacteria 1134
24 Ga0068864_100219999 3300005618 Bacteria 1752
25 Ga0068870_10179238 3300005840 Bacteria 1270
26 Ga0068858_101893627 3300005842 Unclassified 589
27 Ga0068862_100074893 3300005844 Bacteria 2927
28 Ga0075433_11137019 3300006852 Bacteria 679
29 Ga0097620_100135706 3300006931 Bacteria 2533
30 Ga0097620_100482657 3300006931 Bacteria 1335
31 Ga0097620_100664016 3300006931 Bacteria 1134
32 Ga0111539_11226697 3300009094 Bacteria 871
33 Ga0105245_12608890 3300009098 Unclassified 558
34 Ga0105249_12586293 3300009553 Bacteria 580
35 Ga0105239_10841855 3300010375 Bacteria 1052
36 Ga0105246_10157523 3300011119 Bacteria 1726
37 Ga0105246_10170980 3300011119 Bacteria 1664
38 Ga0163162_10910456 3300013306 Bacteria 992
39 Ga0207662_10182339 3300025918 Bacteria 1351
40 Ga0207689_10460218 3300025942 Unclassified 1064
41 Ga0207712_11144091 3300025961 Bacteria 693
42 Ga0207703_11304479 3300026035 Bacteria 698
43 Ga0207676_10160156 3300026095 Bacteria 1949
44 Ga0268265_10057430 3300028380 Bacteria 2966
45 Ga0265323_10196435 3300028653 Bacteria 636
46 Ga0316579_10273904 3300031691 Unclassified 816
47 Ga0316576_11281896 3300031727 Unclassified 516
48 Ga0316577_10353580 3300031733 Bacteria 834
49 Ga0307410_10123996 3300031852 Unclassified 1888
50 Ga0307409_100274453 3300031995 Unclassified 1555
51 Ga0316593_10030154 3300032168 Viruses 1759
52 Ga0316593_10039506 3300032168 Unclassified 1566
53 Ga0316593_10230059 3300032168 Unclassified 690
54 Ga0316596_1213011 3300033541 Unclassified 539
55 Ga0373951_0245986 3300035091 Unclassified 536
56 Ga0373932_0350838 3300035112 Unclassified 561
57 Ga0373941_0212177 3300035115 Unclassified 741
58 Ga0373961_0043570 3300035241 Bacteria 1306
59 Ga0316582_0058988 3300036647 Unclassified 2456
60 Ga0316584_0771918 3300036712 Unclassified 654
61 Ga0400484_12763 3300038725 Bacteria 1596
62 Ga0400483_190475 3300039062 Bacteria 1349
63 Ga0400483_259985 3300039062 Unclassified 1182
64 Ga0451577_0002241 3300042876 Bacteria 23482
65 Ga0451577_0018751 3300042876 Bacteria 6366
66 Ga0451577_0027800 3300042876 Bacteria 5119
67 Ga0451577_0090508 3300042876 Bacteria 2731
68 Ga0451577_0102730 3300042876 Bacteria 2554
69 Ga0451577_0304969 3300042876 Bacteria 1443
70 Ga0451577_0378806 3300042876 Unclassified 1284
71 Ga0451577_0604314 3300042876 Bacteria 995
72 Ga0453683_0005983 3300044673 Bacteria 8384
73 Ga0453683_0010208 3300044673 Bacteria 6233
74 Ga0453683_0029314 3300044673 Bacteria 3480
75 Ga0453683_0069579 3300044673 Bacteria 2200
76 Ga0453683_0170641 3300044673 Bacteria 1378
77 Ga0453683_0219013 3300044673 Bacteria 1210
78 Ga0453683_0671112 3300044673 Unclassified 678
79 Ga0453684_0000003 3300044712 Bacteria 1481694
80 Ga0453684_0000021 3300044712 Bacteria 873490
81 Ga0453684_0000313 3300044712 Bacteria 205836
82 Ga0453684_0000484 3300044712 Bacteria 157641
83 Ga0453684_0001965 3300044712 Bacteria 52881
84 Ga0453684_0006020 3300044712 Bacteria 23482
85 Ga0453684_0010210 3300044712 Bacteria 16101
86 Ga0453684_0026975 3300044712 Bacteria 8268
87 Ga0453684_0037965 3300044712 Bacteria 6598
88 Ga0453684_0097697 3300044712 Bacteria 3603
89 Ga0453684_0105158 3300044712 Bacteria 3444
90 Ga0453684_0112994 3300044712 Bacteria 3296
91 Ga0453684_0118279 3300044712 Unclassified 3205
92 Ga0453684_0132872 3300044712 Unclassified 2984
93 Ga0453684_0256938 3300044712 Bacteria 2003
94 Ga0453684_0306541 3300044712 Unclassified 1803
95 Ga0453684_0322400 3300044712 Unclassified 1749
96 Ga0453684_0478355 3300044712 Unclassified 1382
97 Ga0453684_0585632 3300044712 Bacteria 1225
98 Ga0453684_0839976 3300044712 Unclassified 988
99 Ga0453684_0856662 3300044712 Unclassified 976
100 Ga0453684_0927625 3300044712 Bacteria 931
101 Ga0453684_0998733 3300044712 Unclassified 890
102 Ga0453684_1093587 3300044712 Unclassified 843
103 Ga0453684_1134407 3300044712 Bacteria 824
104 Ga0453684_1171180 3300044712 Unclassified 808
105 Ga0453684_1273460 3300044712 Bacteria 768
106 Ga0453684_1372728 3300044712 Bacteria 734
107 Ga0453684_1414934 3300044712 Unclassified 721
108 Ga0453684_1458178 3300044712 Unclassified 707
109 Ga0453684_1516447 3300044712 Bacteria 691
110 Ga0453684_1656639 3300044712 Unclassified 655
111 Ga0453684_1984418 3300044712 Unclassified 586
112 Ga0453684_2003899 3300044712 Unclassified 583
113 Ga0451576_0000043 3300045051 Bacteria 335666
114 Ga0451576_0016233 3300045051 Bacteria 8224
115 Ga0451576_0116789 3300045051 Unclassified 2777
116 Ga0451576_0151010 3300045051 Bacteria 2423
117 Ga0451576_0257288 3300045051 Bacteria 1825
118 Ga0451576_0360533 3300045051 Unclassified 1522
119 Ga0451576_0684918 3300045051 Bacteria 1077
120 Ga0451576_0732573 3300045051 Unclassified 1039
121 Ga0451576_1192445 3300045051 Unclassified 795
122 Ga0451576_1374631 3300045051 Unclassified 735
123 Ga0496106_1144012 3300048909 Unclassified 609
124 Ga0501040_1204018 3300049576 Unclassified 550
125 Ga0501045_0316805 3300049824 Unclassified 1161
126 nmdc:mga05p37_317107_c1 3300050507 Bacteria 1846
127 nmdc:mga0a205_1016864_c1 3300050515 Bacteria 676
128 nmdc:mga0a205_1035536_c1 3300050515 Bacteria 668
129 Ga0501082_1680241 3300060353 Unclassified 554

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009094 Ga0111539_11226697 Ga0111539_112266972 106
2 3300032168 Ga0316593_10030154 Ga0316593_100301543 110
3 3300031691 Ga0316579_10273904 Ga0316579_102739042 111
4 3300031733 Ga0316577_10353580 Ga0316577_103535802 111
5 3300032168 Ga0316593_10039506 Ga0316593_100395062 111
6 3300032168 Ga0316593_10230059 Ga0316593_102300592 111
7 3300036647 Ga0316582_0058988 Ga0316582_0058988_1005_1370 111
8 3300039062 Ga0400483_190475 Ga0400483_190475_698_1033 111
9 3300031727 Ga0316576_11281896 Ga0316576_112818962 112
10 3300042876 Ga0451577_0090508 Ga0451577_0090508_1469_1807 112
11 3300042876 Ga0451577_0102730 Ga0451577_0102730_657_995 112
12 3300044673 Ga0453683_0005983 Ga0453683_0005983_817_1155 112
13 3300044673 Ga0453683_0010208 Ga0453683_0010208_1830_2168 112
14 3300044673 Ga0453683_0029314 Ga0453683_0029314_615_953 112
15 3300044673 Ga0453683_0671112 Ga0453683_0671112_30_368 112
16 3300044712 Ga0453684_0000003 Ga0453684_0000003_1079283_1079621 112
17 3300044712 Ga0453684_0112994 Ga0453684_0112994_1685_2023 112
18 3300044712 Ga0453684_0132872 Ga0453684_0132872_177_515 112
19 3300044712 Ga0453684_0585632 Ga0453684_0585632_726_1064 112
20 3300044712 Ga0453684_1134407 Ga0453684_1134407_91_429 112
21 3300044712 Ga0453684_1372728 Ga0453684_1372728_115_453 112
22 3300044712 Ga0453684_1414934 Ga0453684_1414934_341_679 112
23 3300044712 Ga0453684_1656639 Ga0453684_1656639_276_614 112
24 3300044712 Ga0453684_2003899 Ga0453684_2003899_89_427 112
25 3300045051 Ga0451576_0000043 Ga0451576_0000043_61431_61769 112
26 3300045051 Ga0451576_0151010 Ga0451576_0151010_562_900 112
27 3300045051 Ga0451576_0684918 Ga0451576_0684918_184_531 112
28 2162886006 SwRhRL3b_contig_3575053 SwRhRL3b_0064.00001620 113
29 2162886007 SwRhRL2b_contig_1707652 SwRhRL2b_0328.00001380 113
30 3300005289 Ga0065704_10070604 Ga0065704_100706043 113
31 3300005289 Ga0065704_10219477 Ga0065704_102194772 113
32 3300005289 Ga0065704_10282260 Ga0065704_102822602 113
33 3300005290 Ga0065712_10168179 Ga0065712_101681791 113
34 3300005290 Ga0065712_10236624 Ga0065712_102366242 113
35 3300005295 Ga0065707_10000453 Ga0065707_1000045346 113
36 3300005295 Ga0065707_10000623 Ga0065707_100006238 113
37 3300005295 Ga0065707_10011313 Ga0065707_100113133 113
38 3300005295 Ga0065707_10084158 Ga0065707_100841589 113
39 3300005334 Ga0068869_100918713 Ga0068869_1009187132 113
40 3300005343 Ga0070687_100079533 Ga0070687_1000795332 113
41 3300005345 Ga0070692_10666164 Ga0070692_106661642 113
42 3300005353 Ga0070669_100578170 Ga0070669_1005781702 113
43 3300005467 Ga0070706_100563132 Ga0070706_1005631322 113
44 3300005471 Ga0070698_100041528 Ga0070698_1000415285 113
45 3300005549 Ga0070704_100423824 Ga0070704_1004238242 113
46 3300005564 Ga0070664_100669593 Ga0070664_1006695932 113
47 3300005577 Ga0068857_100146731 Ga0068857_1001467314 113
48 3300005617 Ga0068859_100135703 Ga0068859_1001357032 113
49 3300005617 Ga0068859_100482595 Ga0068859_1004825952 113
50 3300005617 Ga0068859_100663963 Ga0068859_1006639632 113
51 3300005618 Ga0068864_100219999 Ga0068864_1002199992 113
52 3300005840 Ga0068870_10179238 Ga0068870_101792382 113
53 3300005842 Ga0068858_101893627 Ga0068858_1018936272 113
54 3300005844 Ga0068862_100074893 Ga0068862_1000748932 113
55 3300006852 Ga0075433_11137019 Ga0075433_111370192 113
56 3300006931 Ga0097620_100135706 Ga0097620_1001357063 113
57 3300006931 Ga0097620_100482657 Ga0097620_1004826572 113
58 3300006931 Ga0097620_100664016 Ga0097620_1006640162 113
59 3300009098 Ga0105245_12608890 Ga0105245_126088901 113
60 3300009553 Ga0105249_12586293 Ga0105249_125862932 113
61 3300010375 Ga0105239_10841855 Ga0105239_108418552 113
62 3300011119 Ga0105246_10157523 Ga0105246_101575232 113
63 3300011119 Ga0105246_10170980 Ga0105246_101709802 113
64 3300013306 Ga0163162_10910456 Ga0163162_109104561 113
65 3300025918 Ga0207662_10182339 Ga0207662_101823392 113
66 3300025942 Ga0207689_10460218 Ga0207689_104602181 113
67 3300025961 Ga0207712_11144091 Ga0207712_111440912 113
68 3300026035 Ga0207703_11304479 Ga0207703_113044791 113
69 3300026095 Ga0207676_10160156 Ga0207676_101601562 113
70 3300028380 Ga0268265_10057430 Ga0268265_100574304 113
71 3300028653 Ga0265323_10196435 Ga0265323_101964351 113
72 3300031852 Ga0307410_10123996 Ga0307410_101239963 113
73 3300031995 Ga0307409_100274453 Ga0307409_1002744532 113
74 3300033541 Ga0316596_1213011 Ga0316596_12130111 113
75 3300035091 Ga0373951_0245986 Ga0373951_0245986_23_364 113
76 3300035112 Ga0373932_0350838 Ga0373932_0350838_184_525 113
77 3300035115 Ga0373941_0212177 Ga0373941_0212177_286_627 113
78 3300035241 Ga0373961_0043570 Ga0373961_0043570_86_427 113
79 3300036712 Ga0316584_0771918 Ga0316584_0771918_259_642 113
80 3300038725 Ga0400484_12763 Ga0400484_12763_336_686 113
81 3300039062 Ga0400483_259985 Ga0400483_259985_361_702 113
82 3300042876 Ga0451577_0002241 Ga0451577_0002241_16645_16989 113
83 3300042876 Ga0451577_0018751 Ga0451577_0018751_4363_4710 113
84 3300042876 Ga0451577_0027800 Ga0451577_0027800_688_1029 113
85 3300042876 Ga0451577_0304969 Ga0451577_0304969_679_1023 113
86 3300042876 Ga0451577_0378806 Ga0451577_0378806_133_480 113
87 3300042876 Ga0451577_0604314 Ga0451577_0604314_632_985 113
88 3300044673 Ga0453683_0069579 Ga0453683_0069579_69_425 113
89 3300044673 Ga0453683_0170641 Ga0453683_0170641_721_1062 113
90 3300044673 Ga0453683_0219013 Ga0453683_0219013_418_759 113
91 3300044712 Ga0453684_0000021 Ga0453684_0000021_342574_342927 113
92 3300044712 Ga0453684_0000313 Ga0453684_0000313_61175_61522 113
93 3300044712 Ga0453684_0000484 Ga0453684_0000484_117743_118087 113
94 3300044712 Ga0453684_0001965 Ga0453684_0001965_28609_28953 113
95 3300044712 Ga0453684_0006020 Ga0453684_0006020_20884_21228 113
96 3300044712 Ga0453684_0010210 Ga0453684_0010210_15582_15929 113
97 3300044712 Ga0453684_0026975 Ga0453684_0026975_3882_4238 113
98 3300044712 Ga0453684_0037965 Ga0453684_0037965_756_1100 113
99 3300044712 Ga0453684_0097697 Ga0453684_0097697_1449_1793 113
100 3300044712 Ga0453684_0105158 Ga0453684_0105158_1519_1866 113
101 3300044712 Ga0453684_0118279 Ga0453684_0118279_728_1069 113
102 3300044712 Ga0453684_0256938 Ga0453684_0256938_730_1083 113
103 3300044712 Ga0453684_0306541 Ga0453684_0306541_238_594 113
104 3300044712 Ga0453684_0322400 Ga0453684_0322400_296_649 113
105 3300044712 Ga0453684_0478355 Ga0453684_0478355_358_705 113
106 3300044712 Ga0453684_0839976 Ga0453684_0839976_95_448 113
107 3300044712 Ga0453684_0856662 Ga0453684_0856662_524_868 113
108 3300044712 Ga0453684_0927625 Ga0453684_0927625_447_788 113
109 3300044712 Ga0453684_0998733 Ga0453684_0998733_320_667 113
110 3300044712 Ga0453684_1093587 Ga0453684_1093587_233_592 113
111 3300044712 Ga0453684_1171180 Ga0453684_1171180_107_451 113
112 3300044712 Ga0453684_1273460 Ga0453684_1273460_119_463 113
113 3300044712 Ga0453684_1458178 Ga0453684_1458178_134_481 113
114 3300044712 Ga0453684_1516447 Ga0453684_1516447_232_576 113
115 3300044712 Ga0453684_1984418 Ga0453684_1984418_70_417 113
116 3300045051 Ga0451576_0016233 Ga0451576_0016233_2726_3067 113
117 3300045051 Ga0451576_0116789 Ga0451576_0116789_2025_2366 113
118 3300045051 Ga0451576_0257288 Ga0451576_0257288_52_396 113
119 3300045051 Ga0451576_0360533 Ga0451576_0360533_857_1198 113
120 3300045051 Ga0451576_0732573 Ga0451576_0732573_326_673 113
121 3300045051 Ga0451576_1192445 Ga0451576_1192445_174_515 113
122 3300045051 Ga0451576_1374631 Ga0451576_1374631_296_649 113
123 3300048909 Ga0496106_1144012 Ga0496106_1144012_88_429 113
124 3300049576 Ga0501040_1204018 Ga0501040_1204018_88_432 113
125 3300049824 Ga0501045_0316805 Ga0501045_0316805_111_464 113
126 3300050507 nmdc:mga05p37_317107_c1 nmdc:mga05p37_317107_c1_1434_1793 113
127 3300050515 nmdc:mga0a205_1016864_c1 nmdc:mga0a205_1016864_c1_201_542 113
128 3300050515 nmdc:mga0a205_1035536_c1 nmdc:mga0a205_1035536_c1_98_439 113
129 3300060353 Ga0501082_1680241 Ga0501082_1680241_139_480 113

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vr8-assembly1.cif.gz_I structure of a pseudomurein peptide ligase type e from methanothermus fervidus 0.8494 1 97
2ioj-assembly2.cif.gz_B crystal structure of protein af1212 from archaeoglobus fulgidus, pfam drtgg 0.8448 1 109
7ufp-assembly1.cif.gz_I structure of a pseudomurein peptide ligase type e from methanothermus fervidus 0.8443 1 97
7tzi-assembly2.cif.gz_B structure of a pseudomurein peptide ligase type e from methanothermobacter thermautotrophicus 0.8351 26 92
3l2b-assembly1.cif.gz_B crystal structure of the cbs and drtgg domains of the regulatory region of clostridium perfringens pyrophosphatase complexed with activator, diadenosine tetraphosphate 0.8217 2 104
ID Description Score Start End Superfamily
af_Q2FXM2_67_177_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8595 1 108 3.40.1390.20
2iojB00 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8457 1 109 3.40.1390.20
af_P9WHP1_199_342_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8435 2 104 3.40.1390.20
af_Q2FXM2_67_177_3.40.1390.20 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.818 1 108 3.40.1390.20
3l31B02 Alpha Beta;3-Layer(aba) Sandwich;Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1;HprK N-terminal domain-like 0.8071 1 104 3.40.1390.20
ID Description Score Start End GO Terms
AF-A0A7C3KMB1-F1-model_v4 Serine kinase 1.002 1 111 GO:0016301
AF-A0A3D4NFI0-F1-model_v4 Serine kinase 0.9981 1 113 GO:0016301
AF-A0A3N5RBX4-F1-model_v4 DRTGG domain-containing protein 0.9961 47 113
AF-A0A1F9AKL8-F1-model_v4 DRTGG domain-containing protein 0.9895 41 113
AF-A0A3D4NFI0-F1-model_v4 Serine kinase 0.9893 1 113 GO:0016301

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pLDDT pTM Quality
93.68 0.88 High
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Predicted Structure (AlphaFold2)

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