F141274

General Info

Members Datasets Scaffolds Average Seq Length
129 89 258 312

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10014804|Ga0081539_100148045
Length 361
Sequence VTAESKVHLPLKPVDLHLLLALAEGELHGYGLVRAIDEATDGLVKLDPGNLYRVLKRLLADGHEVAAVFTQPDKPAGRGHHLHAPPVKQLALEHGIAVHQPARIKTDEEVRAIFESIQPSACVVAAYGKILPEWLLQIPRLGCINVHASLLPRYRGAAPINWAIANGERETGVTIMQMDVGMDTGAMLAKRAIAIGDEETAPELSARLAELGAELLSDTLPKVERGEIIAEAQNNDEATYAPLLKREDGLLDWRWTATEISNRVRGFQPWPGVYTALNGARLHLWRARAEEAATDEHETGAPATILRIDRAGIVIRCAAGTALRIEECQLEGKRRVAAREFANGLRLKAGDRISDPLNSSS

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
51 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
52 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
53 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
54 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
57 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
58 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
59 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
66 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
67 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
68 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
69 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
71 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
72 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
73 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
74 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
75 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
76 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
77 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
78 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
79 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
80 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
81 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
82 2511231221 Azospirillum lipoferum 4B Isolate Rhizosphere
83 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
84 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
85 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
86 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
87 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
88 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
89 8054002106 Azospirillum lipoferum 59b Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.8
Metatranscriptomes 0
Isolates 6.2

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.33
Nodule 0
Rhizoplane 2.33
Rhizosphere 84.5
Stem 0
Stem Tuber 0
Unclassified 10.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10014804 3300005985 Bacteria 5730
2 Ga0065707_10219625 3300005295 Bacteria 1230
3 Ga0070690_100019495 3300005330 Unclassified 4118
4 Ga0068868_100206649 3300005338 Unclassified 1639
5 Ga0070689_100275550 3300005340 Unclassified 1394
6 Ga0070669_100011663 3300005353 Bacteria 6234
7 Ga0070703_10003712 3300005406 Unclassified 4325
8 Ga0070709_10000092 3300005434 Bacteria 64319
9 Ga0070711_100000022 3300005439 Bacteria 119718
10 Ga0070705_100000068 3300005440 Bacteria 55248
11 Ga0070705_100169828 3300005440 Bacteria 1467
12 Ga0070705_100308982 3300005440 Bacteria 1136
13 Ga0070694_100038426 3300005444 Bacteria 3181
14 Ga0070708_100056564 3300005445 Bacteria 3490
15 Ga0070706_100000299 3300005467 Bacteria 60351
16 Ga0070707_100000484 3300005468 Bacteria 39358
17 Ga0070698_100270461 3300005471 Bacteria 1631
18 Ga0070698_100278848 3300005471 Bacteria 1603
19 Ga0070699_100000015 3300005518 Bacteria 211169
20 Ga0070699_100087728 3300005518 Bacteria 2716
21 Ga0070699_100439462 3300005518 Bacteria 1182
22 Ga0070696_100000698 3300005546 Bacteria 21494
23 Ga0070696_100022946 3300005546 Bacteria 4243
24 Ga0070704_100015430 3300005549 Bacteria 4799
25 Ga0068857_100088397 3300005577 Bacteria 2772
26 Ga0068859_100438549 3300005617 Bacteria 1402
27 Ga0081455_10013979 3300005937 Bacteria 7890
28 Ga0081539_10006732 3300005985 Bacteria 10816
29 Ga0070716_100082979 3300006173 Bacteria 1918
30 Ga0075428_100457871 3300006844 Bacteria 1366
31 Ga0075428_100557829 3300006844 Bacteria 1224
32 Ga0075431_100214469 3300006847 Bacteria 1965
33 Ga0075431_100255512 3300006847 Bacteria 1779
34 Ga0075431_100259793 3300006847 Bacteria 1762
35 Ga0075433_10038510 3300006852 Bacteria 4129
36 Ga0075433_10230553 3300006852 Bacteria 1644
37 Ga0075429_100034956 3300006880 Bacteria 4368
38 Ga0075436_100000843 3300006914 Bacteria 20363
39 Ga0097620_100438511 3300006931 Bacteria 1402
40 Ga0099794_10093619 3300007265 Bacteria 1494
41 Ga0111539_10148543 3300009094 Bacteria 2744
42 Ga0111539_10245081 3300009094 Bacteria 2086
43 Ga0114129_10008375 3300009147 Bacteria 14732
44 Ga0114129_10264948 3300009147 Bacteria 2301
45 Ga0114129_10361152 3300009147 Bacteria 1922
46 Ga0105241_10174162 3300009174 Bacteria 1779
47 Ga0105249_10338357 3300009553 Bacteria 1521
48 Ga0157380_10122838 3300014326 Bacteria 2202
49 Ga0157380_10263510 3300014326 Archaea 1567
50 Ga0213872_10000168 3300021361 Bacteria 59182
51 Ga0213875_10004541 3300021388 Bacteria 7590
52 Ga0207653_10001187 3300025885 Bacteria 8507
53 Ga0207699_10000130 3300025906 Bacteria 52105
54 Ga0207684_10000586 3300025910 Bacteria 43887
55 Ga0207693_10062881 3300025915 Unclassified 2908
56 Ga0207663_10000047 3300025916 Bacteria 67188
57 Ga0207646_10000857 3300025922 Bacteria 39355
58 Ga0207681_10053934 3300025923 Unclassified 2731
59 Ga0207674_10130634 3300026116 Bacteria 2475
60 Ga0207674_10172765 3300026116 Bacteria 2114
61 Ga0207428_10016840 3300027907 Bacteria 6281
62 Ga0207428_10321128 3300027907 Unclassified 1143
63 Ga0265338_10024668 3300028800 Bacteria 6136
64 Ga0265325_10004839 3300031241 Bacteria 8422
65 Ga0265339_10075807 3300031249 Bacteria 1785
66 Ga0265316_10046062 3300031344 Bacteria 3458
67 Ga0316575_10074885 3300031665 Bacteria 1362
68 Ga0395899_0011815 3300037312 Bacteria 6684
69 Ga0395900_0001871 3300037418 Bacteria 23943
70 Ga0395898_0001464 3300037466 Bacteria 33283
71 Ga0395898_0004581 3300037466 Bacteria 15090
72 Ga0395905_0000546 3300037471 Bacteria 51378
73 Ga0395905_0112089 3300037471 Bacteria 2561
74 Ga0436364_0896460 3300037853 Bacteria 7873
75 Ga0395901_0001964 3300038443 Bacteria 21152
76 Ga0395901_0021202 3300038443 Bacteria 6654
77 Ga0400483_009236 3300039062 Unclassified 2596
78 Ga0400483_248472 3300039062 Bacteria 1912
79 Ga0436365_1202336 3300039437 Bacteria 1288
80 Ga0436361_0510189 3300039447 Bacteria 5563
81 Ga0436361_0807183 3300039447 Bacteria 94852
82 Ga0436361_0840299 3300039447 Bacteria 11889
83 Ga0451577_0000047 3300042876 Bacteria 312768
84 Ga0451577_0000312 3300042876 Bacteria 92787
85 Ga0451577_0001586 3300042876 Bacteria 29663
86 Ga0451577_0061190 3300042876 Bacteria 3357
87 Ga0453684_0000374 3300044712 Bacteria 183743
88 Ga0453684_0000382 3300044712 Bacteria 181519
89 Ga0453684_0023302 3300044712 Bacteria 9130
90 Ga0453684_0435646 3300044712 Bacteria 1461
91 Ga0466957_0129214 3300044842 Bacteria 1617
92 Ga0451576_0001603 3300045051 Bacteria 38023
93 Ga0451576_0068402 3300045051 Bacteria 3695
94 Ga0451576_0393273 3300045051 Bacteria 1453
95 Ga0496109_0000064 3300048912 Bacteria 112316
96 Ga0496112_0020797 3300048915 Bacteria 6228
97 Ga0496113_0012184 3300048916 Bacteria 5772
98 Ga0496122_0060036 3300048925 Bacteria 2804
99 Ga0496124_0000007 3300048927 Bacteria 883534
100 Ga0501046_0162988 3300049580 Bacteria 1676
101 Ga0501048_0155214 3300049582 Bacteria 1619
102 nmdc:mga05p37_303336_c1 3300050507 Bacteria 1896
103 nmdc:mga05p37_39618_c1 3300050507 Bacteria 5786
104 nmdc:mga05p37_525_c1 3300050507 Bacteria 42430
105 nmdc:mga0qj67_148277_c1 3300050509 Bacteria 1902
106 nmdc:mga06r32_120604_c1 3300050510 Unclassified 2586
107 nmdc:mga06r32_280021_c1 3300050510 Unclassified 1655
108 nmdc:mga06r32_44715_c1 3300050510 Unclassified 4218
109 nmdc:mga08y16_135424_c1 3300050511 Bacteria 2560
110 nmdc:mga08y16_36361_c1 3300050511 Bacteria 5172
111 nmdc:mga0n895_171127_c1 3300050512 Unclassified 2204
112 nmdc:mga08x19_226161_c1 3300050514 Unclassified 1287
113 nmdc:mga08x19_28_c1 3300050514 Bacteria 224933
114 nmdc:mga08x19_63364_c1 3300050514 Unclassified 2399
115 nmdc:mga08x19_81300_c1 3300050514 Bacteria 2128
116 nmdc:mga0a205_187299_c1 3300050515 Bacteria 1962
117 nmdc:mga0a205_47320_c1 3300050515 Bacteria 4149
118 Ga0500555_005488 3300053103 Bacteria 3597
119 Ga0500572_031454 3300053111 Bacteria 1483
120 Ga0500636_0013431 3300053177 Bacteria 4810
121 Ga0530510_0287414 3300061734 Bacteria 1229
122 2512034257 2511231221 Bacteria 6846400
123 2523104690 2522572158 Bacteria 6514390
124 2599105242 2597490356 Bacteria 7030811
125 2846955078 2846952575 Bacteria 6587527
126 2848858629 2848858292 Bacteria 7391279
127 2857543954 2857542790 Bacteria 5326616
128 2897806657 2897803580 Bacteria 7000062
129 8054004266 8054002106 Bacteria 7987183
130 Ga0081539_10014804
131 Ga0065707_10219625
132 Ga0070690_100019495
133 Ga0068868_100206649
134 Ga0070689_100275550
135 Ga0070669_100011663
136 Ga0070703_10003712
137 Ga0070709_10000092
138 Ga0070711_100000022
139 Ga0070705_100000068
140 Ga0070705_100169828
141 Ga0070705_100308982
142 Ga0070694_100038426
143 Ga0070708_100056564
144 Ga0070706_100000299
145 Ga0070707_100000484
146 Ga0070698_100270461
147 Ga0070698_100278848
148 Ga0070699_100000015
149 Ga0070699_100087728
150 Ga0070699_100439462
151 Ga0070696_100000698
152 Ga0070696_100022946
153 Ga0070704_100015430
154 Ga0068857_100088397
155 Ga0068859_100438549
156 Ga0081455_10013979
157 Ga0081539_10006732
158 Ga0070716_100082979
159 Ga0075428_100457871
160 Ga0075428_100557829
161 Ga0075431_100214469
162 Ga0075431_100255512
163 Ga0075431_100259793
164 Ga0075433_10038510
165 Ga0075433_10230553
166 Ga0075429_100034956
167 Ga0075436_100000843
168 Ga0097620_100438511
169 Ga0099794_10093619
170 Ga0111539_10148543
171 Ga0111539_10245081
172 Ga0114129_10008375
173 Ga0114129_10264948
174 Ga0114129_10361152
175 Ga0105241_10174162
176 Ga0105249_10338357
177 Ga0157380_10122838
178 Ga0157380_10263510
179 Ga0213872_10000168
180 Ga0213875_10004541
181 Ga0207653_10001187
182 Ga0207699_10000130
183 Ga0207684_10000586
184 Ga0207693_10062881
185 Ga0207663_10000047
186 Ga0207646_10000857
187 Ga0207681_10053934
188 Ga0207674_10130634
189 Ga0207674_10172765
190 Ga0207428_10016840
191 Ga0207428_10321128
192 Ga0265338_10024668
193 Ga0265325_10004839
194 Ga0265339_10075807
195 Ga0265316_10046062
196 Ga0316575_10074885
197 Ga0395899_0011815
198 Ga0395900_0001871
199 Ga0395898_0001464
200 Ga0395898_0004581
201 Ga0395905_0000546
202 Ga0395905_0112089
203 Ga0436364_0896460
204 Ga0395901_0001964
205 Ga0395901_0021202
206 Ga0400483_009236
207 Ga0400483_248472
208 Ga0436365_1202336
209 Ga0436361_0510189
210 Ga0436361_0807183
211 Ga0436361_0840299
212 Ga0451577_0000047
213 Ga0451577_0000312
214 Ga0451577_0001586
215 Ga0451577_0061190
216 Ga0453684_0000374
217 Ga0453684_0000382
218 Ga0453684_0023302
219 Ga0453684_0435646
220 Ga0466957_0129214
221 Ga0451576_0001603
222 Ga0451576_0068402
223 Ga0451576_0393273
224 Ga0496109_0000064
225 Ga0496112_0020797
226 Ga0496113_0012184
227 Ga0496122_0060036
228 Ga0496124_0000007
229 Ga0501046_0162988
230 Ga0501048_0155214
231 nmdc:mga05p37_303336_c1
232 nmdc:mga05p37_39618_c1
233 nmdc:mga05p37_525_c1
234 nmdc:mga0qj67_148277_c1
235 nmdc:mga06r32_120604_c1
236 nmdc:mga06r32_280021_c1
237 nmdc:mga06r32_44715_c1
238 nmdc:mga08y16_135424_c1
239 nmdc:mga08y16_36361_c1
240 nmdc:mga0n895_171127_c1
241 nmdc:mga08x19_226161_c1
242 nmdc:mga08x19_28_c1
243 nmdc:mga08x19_63364_c1
244 nmdc:mga08x19_81300_c1
245 nmdc:mga0a205_187299_c1
246 nmdc:mga0a205_47320_c1
247 Ga0500555_005488
248 Ga0500572_031454
249 Ga0500636_0013431
250 Ga0530510_0287414
251 2512034257
252 2523104690
253 2599105242
254 2846955078
255 2848858629
256 2857543954
257 2897806657
258 8054004266

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

243

346

0.97

PF00551

Formyl_trans_N

Formyl transferase

43

220

0.94

PF03551

PadR

Transcriptional regulator PadR-like family

18

77

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9628 1 309
3tqq-assembly1.cif.gz_A structure of the methionyl-trna formyltransferase (fmt) from coxiella burnetii 0.9601 2 307
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9477 1 309
3q0i-assembly1.cif.gz_A methionyl-trna formyltransferase from vibrio cholerae 0.9343 2 308
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.9341 2 306
ID Description Score Start End Superfamily
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9575 2 201 3.40.50.170
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9522 2 201 3.40.50.170
af_B4FRN6_28_246_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9293 1 201 3.40.50.170
af_I1K1P3_39_365_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.925 1 303 3.40.50.12230
af_P9WND3_1_310_3.40.50.12230 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9205 2 302 3.40.50.12230
ID Description Score Start End GO Terms
AF-A0A3B8JDQ4-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.978 1 221 GO:0004479
GO:0005829
AF-A0A7C7KXL8-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9764 1 237 GO:0004479
GO:0005829
AF-A0A3B9LRQ6-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9718 1 242 GO:0004479
GO:0005829
AF-A0A354P2G8-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9703 1 197 GO:0004479
GO:0005829
AF-A0A328UYP5-F1-model_v4 deleted 0.9696 1 172

Map