F135160

General Info

Members Datasets Scaffolds Average Seq Length
127 105 254 264

Family's Representative Sequence

Representative Sequence 3300039145|Ga0237816_00315|Ga0237816_00315_1369_2316
Length 315
Sequence VSNPLLPAGHRRYGDSPHVPKPPAGVPASLSFARSGLATMTPARKPAAARAGAIHVGVGGWVYAPWRDNFYPAGLVQRLELEYASRHLTAIEINGTYYGAQKPATYAKWRDQTPPGFVFSAKAPMRIVQARVLAKTGRQVEDFVGGIVELGDRLGPLVWQFEGQGRLQHEDFAAFLAQLPREAGGRRLRHVLDVRDAAFANADLVALARQHQLATVFTDAEAHPNFADLATDFVYARLMRTQAGQATGYAAKALAGWADIARRWAAGEDPAELPHLLPAQDAGKPREVFVYFINGAKQRNPAAAMALMAALGKKR

Samples

Sample ID Description Type Environment
1 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
9 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
17 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
18 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
19 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
20 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
21 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
22 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
23 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
24 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
31 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
32 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
33 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
34 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
35 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
36 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
37 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
38 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
39 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
40 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
41 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
42 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
43 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
44 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
45 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
46 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
50 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
51 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
52 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
53 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
54 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
55 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
56 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
57 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
58 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
59 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
60 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
61 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
62 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
63 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
64 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
65 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
66 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
69 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
70 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
71 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
72 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
73 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
74 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
75 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
81 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
82 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
83 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
84 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
85 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
86 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
87 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
88 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
89 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
90 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
91 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
92 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
93 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
94 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
95 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
96 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
97 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
98 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
99 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
100 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
101 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
102 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
103 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
104 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
105 8002869464 Pseudoxanthomonas helianthi 110414 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 81.89
Metatranscriptomes 0
Isolates 18.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.87
Nodule 0
Rhizoplane 9.45
Rhizosphere 52.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0237816_00315 3300039145 Bacteria 4142
2 JGI25404J52841_10000774 3300003659 Bacteria 5055
3 Ga0055530_10021445 3300003791 Bacteria 1904
4 Ga0070670_100042736 3300005331 Bacteria 3897
5 Ga0070669_100353753 3300005353 Bacteria 1193
6 Ga0070671_100060611 3300005355 Bacteria 3150
7 Ga0070678_100099660 3300005456 Bacteria 2248
8 Ga0070672_100005696 3300005543 Bacteria 8301
9 Ga0068864_100360246 3300005618 Bacteria 1374
10 Ga0068860_100733022 3300005843 Bacteria 999
11 Ga0068862_100658978 3300005844 Bacteria 1010
12 Ga0070712_100262219 3300006175 Bacteria 1385
13 Ga0075366_10001515 3300006195 Bacteria 11597
14 Ga0075366_10002469 3300006195 Bacteria 9470
15 Ga0075430_100330434 3300006846 Bacteria 1260
16 Ga0105248_10012235 3300009177 Bacteria 9461
17 Ga0105148_100001 3300009978 Bacteria 58900
18 Ga0105032_100707 3300009979 Bacteria 3212
19 Ga0105029_100929 3300009984 Bacteria 1710
20 Ga0105028_105656 3300009993 Bacteria 1298
21 Ga0157375_10022878 3300013308 Bacteria 5759
22 Ga0209673_1002402 3300025273 Bacteria 13098
23 Ga0209025_1069950 3300025294 Bacteria 1252
24 Ga0209050_1000687 3300025298 Bacteria 50814
25 Ga0209257_1003814 3300025304 Bacteria 12379
26 Ga0209257_1010139 3300025304 Bacteria 4855
27 Ga0207705_10123843 3300025909 Bacteria 1920
28 Ga0207650_10101218 3300025925 Bacteria 2218
29 Ga0207691_10007559 3300025940 Bacteria 10461
30 Ga0207711_10007059 3300025941 Bacteria 9413
31 Ga0207676_10076268 3300026095 Bacteria 2708
32 Ga0307513_10002061 3300031456 Bacteria 28285
33 Ga0307513_10371549 3300031456 Bacteria 1172
34 Ga0265314_10030561 3300031711 Bacteria 3985
35 Ga0307413_10209043 3300031824 Bacteria 1416
36 Ga0307414_10001316 3300032004 Bacteria 12829
37 Ga0307414_10181869 3300032004 Bacteria 1692
38 Ga0307414_10571438 3300032004 Bacteria 1010
39 Ga0373936_0072932 3300035113 Bacteria 1418
40 Ga0373954_0062071 3300035118 Bacteria 1765
41 Ga0373956_0167686 3300035119 Bacteria 1036
42 Ga0373937_0012081 3300036401 Bacteria 7579
43 Ga0395898_0308034 3300037466 Bacteria 1511
44 Ga0436361_0707172 3300039447 Bacteria 9749
45 Ga0439465_0053555 3300041413 Bacteria 1326
46 Ga0451791_0604874 3300041451 Bacteria 1069
47 Ga0451793_0135823 3300041452 Bacteria 1090
48 Ga0451793_1661283 3300041452 Bacteria 2995
49 Ga0451800_0083583 3300041459 Bacteria 8558
50 Ga0451806_396928 3300041462 Bacteria 6035
51 Ga0451837_1185710 3300041494 Bacteria 3254
52 Ga0451837_1304572 3300041494 Bacteria 935
53 Ga0439464_0007668 3300042439 Bacteria 2824
54 Ga0451577_0121560 3300042876 Bacteria 2339
55 Ga0453684_0184999 3300044712 Bacteria 2442
56 Ga0495596_0003122 3300046500 Bacteria 8552
57 Ga0495596_0005190 3300046500 Bacteria 6194
58 Ga0495607_0001940 3300046501 Bacteria 17479
59 Ga0495607_0017191 3300046501 Bacteria 4651
60 Ga0495583_0034038 3300046506 Bacteria 2445
61 Ga0495606_0005264 3300046507 Bacteria 12481
62 Ga0495606_0030954 3300046507 Bacteria 3728
63 Ga0495610_0000895 3300046512 Bacteria 27727
64 Ga0495616_0016016 3300046513 Bacteria 4156
65 Ga0495632_0015582 3300046519 Bacteria 4253
66 Ga0495643_0017757 3300046522 Bacteria 4151
67 Ga0495663_0000618 3300046525 Bacteria 12377
68 Ga0495609_0002150 3300046538 Bacteria 12389
69 Ga0495621_0013516 3300046539 Bacteria 2567
70 Ga0495625_0051099 3300046660 Bacteria 2964
71 Ga0495671_0004319 3300046692 Bacteria 8542
72 Ga0495615_0000089 3300048090 Bacteria 27064
73 Ga0495626_0017338 3300048091 Bacteria 3638
74 Ga0496102_0191713 3300048905 Bacteria 1926
75 Ga0496108_0014317 3300048911 Bacteria 6474
76 Ga0496109_0013932 3300048912 Bacteria 6991
77 Ga0496112_0205439 3300048915 Bacteria 1928
78 Ga0496113_0025124 3300048916 Bacteria 4243
79 Ga0496116_0000284 3300048919 Bacteria 86342
80 Ga0496121_0002311 3300048924 Bacteria 29549
81 Ga0496122_0003999 3300048925 Bacteria 18795
82 Ga0496122_0004124 3300048925 Bacteria 18373
83 Ga0496122_0010275 3300048925 Bacteria 9685
84 Ga0496122_0032308 3300048925 Bacteria 4332
85 Ga0496123_0002947 3300048926 Bacteria 19879
86 Ga0496123_0003090 3300048926 Bacteria 19120
87 Ga0496123_0003256 3300048926 Bacteria 18438
88 Ga0496123_0024397 3300048926 Bacteria 4598
89 Ga0496124_0000018 3300048927 Bacteria 442940
90 Ga0496124_0001485 3300048927 Bacteria 34464
91 Ga0496124_0006473 3300048927 Bacteria 12750
92 Ga0496124_0155907 3300048927 Bacteria 1786
93 Ga0496125_0004436 3300048928 Bacteria 16185
94 Ga0496125_0008012 3300048928 Bacteria 11153
95 Ga0496125_0059721 3300048928 Bacteria 3070
96 Ga0496125_0087919 3300048928 Bacteria 2344
97 Ga0496126_0002929 3300048929 Bacteria 22198
98 Ga0501032_0010996 3300049569 Bacteria 6506
99 Ga0501034_0735137 3300049571 Bacteria 883
100 Ga0501070_0398515 3300049586 Bacteria 1113
101 Ga0501035_0534422 3300049822 Bacteria 962
102 nmdc:mga03683_70841_c1 3300050489 Bacteria 1490
103 nmdc:mga0k408_406_c1 3300050493 Bacteria 23501
104 Ga0495619_0375136 3300053085 Bacteria 983
105 2511129594 2510917021 Bacteria 5705459
106 2511389432 2511231027 Bacteria 5013807
107 2643895136 2643221577 Bacteria 3710843
108 2644477295 2643221685 Bacteria 3673288
109 2765465572 2765235802 Bacteria 5618596
110 2770195595 2767802442 Bacteria 5747986
111 2776271542 2775506902 Bacteria 6208009
112 2776279947 2775506904 Bacteria 5954060
113 2819552864 2818991438 Bacteria 5793701
114 2839995559 2839993093 Bacteria 5512535
115 2840768057 2840764183 Bacteria 6358399
116 2842781566 2842780639 Bacteria 4337790
117 2842872755 2842871566 Bacteria 4827117
118 2857443203 2857442823 Bacteria 4562550
119 2894654270 2894652903 Bacteria 4587256
120 2904583198 2904578770 Bacteria 5302906
121 2919123847 2919119836 Bacteria 5208557
122 2928523236 2928521798 Bacteria 4960112
123 2937845913 2937843397 Bacteria 5256375
124 2954015506 2954011201 Bacteria 4762601
125 2987607626 2987605356 Bacteria 4187822
126 3002143913 3002141150 Bacteria 5254435
127 8002869496 8002869464 Bacteria 3588529
128 Ga0237816_00315
129 JGI25404J52841_10000774
130 Ga0055530_10021445
131 Ga0070670_100042736
132 Ga0070669_100353753
133 Ga0070671_100060611
134 Ga0070678_100099660
135 Ga0070672_100005696
136 Ga0068864_100360246
137 Ga0068860_100733022
138 Ga0068862_100658978
139 Ga0070712_100262219
140 Ga0075366_10001515
141 Ga0075366_10002469
142 Ga0075430_100330434
143 Ga0105248_10012235
144 Ga0105148_100001
145 Ga0105032_100707
146 Ga0105029_100929
147 Ga0105028_105656
148 Ga0157375_10022878
149 Ga0209673_1002402
150 Ga0209025_1069950
151 Ga0209050_1000687
152 Ga0209257_1003814
153 Ga0209257_1010139
154 Ga0207705_10123843
155 Ga0207650_10101218
156 Ga0207691_10007559
157 Ga0207711_10007059
158 Ga0207676_10076268
159 Ga0307513_10002061
160 Ga0307513_10371549
161 Ga0265314_10030561
162 Ga0307413_10209043
163 Ga0307414_10001316
164 Ga0307414_10181869
165 Ga0307414_10571438
166 Ga0373936_0072932
167 Ga0373954_0062071
168 Ga0373956_0167686
169 Ga0373937_0012081
170 Ga0395898_0308034
171 Ga0436361_0707172
172 Ga0439465_0053555
173 Ga0451791_0604874
174 Ga0451793_0135823
175 Ga0451793_1661283
176 Ga0451800_0083583
177 Ga0451806_396928
178 Ga0451837_1185710
179 Ga0451837_1304572
180 Ga0439464_0007668
181 Ga0451577_0121560
182 Ga0453684_0184999
183 Ga0495596_0003122
184 Ga0495596_0005190
185 Ga0495607_0001940
186 Ga0495607_0017191
187 Ga0495583_0034038
188 Ga0495606_0005264
189 Ga0495606_0030954
190 Ga0495610_0000895
191 Ga0495616_0016016
192 Ga0495632_0015582
193 Ga0495643_0017757
194 Ga0495663_0000618
195 Ga0495609_0002150
196 Ga0495621_0013516
197 Ga0495625_0051099
198 Ga0495671_0004319
199 Ga0495615_0000089
200 Ga0495626_0017338
201 Ga0496102_0191713
202 Ga0496108_0014317
203 Ga0496109_0013932
204 Ga0496112_0205439
205 Ga0496113_0025124
206 Ga0496116_0000284
207 Ga0496121_0002311
208 Ga0496122_0003999
209 Ga0496122_0004124
210 Ga0496122_0010275
211 Ga0496122_0032308
212 Ga0496123_0002947
213 Ga0496123_0003090
214 Ga0496123_0003256
215 Ga0496123_0024397
216 Ga0496124_0000018
217 Ga0496124_0001485
218 Ga0496124_0006473
219 Ga0496124_0155907
220 Ga0496125_0004436
221 Ga0496125_0008012
222 Ga0496125_0059721
223 Ga0496125_0087919
224 Ga0496126_0002929
225 Ga0501032_0010996
226 Ga0501034_0735137
227 Ga0501070_0398515
228 Ga0501035_0534422
229 nmdc:mga03683_70841_c1
230 nmdc:mga0k408_406_c1
231 Ga0495619_0375136
232 2511129594
233 2511389432
234 2643895136
235 2644477295
236 2765465572
237 2770195595
238 2776271542
239 2776279947
240 2819552864
241 2839995559
242 2840768057
243 2842781566
244 2842872755
245 2857443203
246 2894654270
247 2904583198
248 2919123847
249 2928523236
250 2937845913
251 2954015506
252 2987607626
253 3002143913
254 8002869496

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01904

DUF72

Protein of unknown function DUF72

71

310

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vpq-assembly1.cif.gz_A crystal structure of a duf72 family protein (tm1631) from thermotoga maritima msb8 at 2.20 a resolution 0.7379 18 279
1vpq-assembly1.cif.gz_A crystal structure of a duf72 family protein (tm1631) from thermotoga maritima msb8 at 2.20 a resolution 0.7225 18 279
1vpy-assembly1.cif.gz_A crystal structure of a duf72 family protein (ef0366) from enterococcus faecalis v583 at 2.52 a resolution 0.7119 18 280
1vpy-assembly1.cif.gz_A crystal structure of a duf72 family protein (ef0366) from enterococcus faecalis v583 at 2.52 a resolution 0.6964 18 280
1ztv-assembly1.cif.gz_B crystal structure of a duf72 family protein (ef0366) from enterococcus faecalis v583 at 3.10 a resolution 0.6737 19 280
ID Description Score Start End Superfamily
af_P37348_1_259_3.20.20.410 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.778 19 279 3.20.20.410
af_P37348_1_259_3.20.20.410 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.7559 19 279 3.20.20.410
1vpqA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.7379 18 279 3.20.20.410
1vpqA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.7225 18 279 3.20.20.410
af_Q2FZX7_1_282_3.20.20.410 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Protein of unknown function UPF0759 0.7093 19 280 3.20.20.410
ID Description Score Start End GO Terms
AF-A0A401TZY1-F1-model_v4 DUF72 domain-containing protein 0.991 125 278
AF-A0A530R533-F1-model_v4 DUF72 domain-containing protein 0.9863 128 280
AF-A0A401TZY1-F1-model_v4 DUF72 domain-containing protein 0.9846 125 278
AF-A0A1H0E3J2-F1-model_v4 deleted 0.9833 16 278
AF-A0A375DYH5-F1-model_v4 DUF72 domain-containing protein 0.983 19 279

Map