F129931

General Info

Members Datasets Scaffolds Average Seq Length
126 98 252 241

Family's Representative Sequence

Representative Sequence 3300005981|Ga0081538_10016693|Ga0081538_100166931
Length 259
Sequence MRDKERSRVVFLELPEKVAIVTGAARGIGFAIADRLSRAGARVVVADIDRESAVAAVERLREGGSEAVEAVADVTKPEEVGAMVERAIDAFGRLDVLVNNAGITGRDASLSKITDEDWERVLKLNLTATFYCCRAAIPRMREQSSGAVVNVASISGKEGNPNMIPYSVSKAGVICLTKALAREVIHDGVRVNCVAPAVIETPLLDQLGPEAIEYMTTKIPMGRMGRAEEVAAVVHFLASDDASFVTGQCYDVSGGRATY

Samples

Sample ID Description Type Environment
1 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
40 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
65 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
66 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
74 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
79 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
80 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
85 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
86 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
87 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
88 2508501050 Microvirga lupini Lut6 Isolate Nodule
89 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
90 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
91 2758568016 [Ochrobactrum] quorumnocens A44 Isolate Rhizosphere
92 2773857925 Microvirga vignae BR3299 Isolate Unclassified
93 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
94 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
95 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
96 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
97 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
98 8002775197 Frankia nepalensis CN7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 91.27
Metatranscriptomes 0
Isolates 8.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 3.97
Rhizoplane 4.76
Rhizosphere 80.95
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081538_10016693 3300005981 Bacteria 5615
2 rootH2_10171669 3300003320 Bacteria 4052
3 Ga0070658_10056685 3300005327 Bacteria 3185
4 Ga0070682_100502595 3300005337 Bacteria 940
5 Ga0070668_100000364 3300005347 Bacteria 29898
6 Ga0070669_100022386 3300005353 Bacteria 4518
7 Ga0070673_100745099 3300005364 Bacteria 902
8 Ga0070714_100291882 3300005435 Bacteria 1518
9 Ga0070713_100302371 3300005436 Bacteria 1473
10 Ga0070705_100235939 3300005440 Bacteria 1275
11 Ga0070708_100470045 3300005445 Unclassified 1186
12 Ga0070663_100355052 3300005455 Bacteria 1188
13 Ga0070706_100299925 3300005467 Unclassified 1499
14 Ga0070706_100513284 3300005467 Unclassified 1115
15 Ga0070698_100367147 3300005471 Unclassified 1371
16 Ga0070699_100098886 3300005518 Bacteria 2556
17 Ga0070699_100592254 3300005518 Bacteria 1011
18 Ga0070684_100004402 3300005535 Bacteria 10717
19 Ga0070684_100549528 3300005535 Bacteria 1072
20 Ga0070697_100336285 3300005536 Unclassified 1302
21 Ga0070672_100100797 3300005543 Bacteria 2342
22 Ga0068857_100427187 3300005577 Bacteria 1236
23 Ga0068858_100013962 3300005842 Bacteria 7577
24 Ga0068860_100179605 3300005843 Bacteria 2046
25 Ga0068862_100218139 3300005844 Bacteria 1726
26 Ga0081455_10015902 3300005937 Bacteria 7283
27 Ga0081539_10001103 3300005985 Bacteria 49011
28 Ga0081539_10002019 3300005985 Bacteria 30676
29 Ga0070717_10113138 3300006028 Bacteria 2317
30 Ga0068871_101017850 3300006358 Bacteria 772
31 Ga0075431_100197829 3300006847 Bacteria 2057
32 Ga0075433_10026161 3300006852 Bacteria 4937
33 Ga0105240_10002859 3300009093 Bacteria 27290
34 Ga0114129_10209915 3300009147 Bacteria 2633
35 Ga0105243_10075336 3300009148 Bacteria 2739
36 Ga0105248_10597960 3300009177 Bacteria 1245
37 Ga0105237_10026958 3300009545 Bacteria 5869
38 Ga0105237_10061933 3300009545 Bacteria 3740
39 Ga0157371_10241409 3300013102 Bacteria 1300
40 Ga0157374_10335398 3300013296 Bacteria 1500
41 Ga0163163_10067044 3300014325 Bacteria 3567
42 Ga0157379_10340884 3300014968 Bacteria 1371
43 Ga0157376_10357629 3300014969 Bacteria 1399
44 Ga0213873_10006763 3300021358 Bacteria 2268
45 Ga0213876_10189210 3300021384 Bacteria 1095
46 Ga0213876_10228084 3300021384 Bacteria 990
47 Ga0207684_10011153 3300025910 Bacteria 7868
48 Ga0207684_10241448 3300025910 Bacteria 1558
49 Ga0207695_10005972 3300025913 Bacteria 15924
50 Ga0207671_10040850 3300025914 Bacteria 3432
51 Ga0207671_10131393 3300025914 Bacteria 1922
52 Ga0207649_10275075 3300025920 Bacteria 1222
53 Ga0207681_10236350 3300025923 Bacteria 1420
54 Ga0207664_10353797 3300025929 Bacteria 1300
55 Ga0207691_10625632 3300025940 Bacteria 910
56 Ga0207661_10017334 3300025944 Bacteria 5326
57 Ga0207679_10119922 3300025945 Bacteria 2092
58 Ga0207679_10424040 3300025945 Bacteria 1175
59 Ga0207668_10000326 3300025972 Bacteria 30849
60 Ga0207668_10055067 3300025972 Bacteria 2763
61 Ga0207703_10123771 3300026035 Bacteria 2223
62 Ga0207674_10174305 3300026116 Bacteria 2103
63 Ga0268264_10076517 3300028381 Bacteria 2848
64 Ga0265331_10050082 3300031250 Bacteria 2004
65 Ga0265331_10150243 3300031250 Bacteria 1058
66 Ga0307408_100029041 3300031548 Bacteria 3828
67 Ga0307408_100336751 3300031548 Bacteria 1276
68 Ga0307514_10207324 3300031649 Bacteria 1222
69 Ga0307410_10034370 3300031852 Bacteria 3283
70 Ga0307410_10061435 3300031852 Bacteria 2571
71 Ga0307406_10076333 3300031901 Bacteria 2213
72 Ga0307406_10125244 3300031901 Bacteria 1794
73 Ga0307406_10160153 3300031901 Bacteria 1617
74 Ga0307406_10212608 3300031901 Bacteria 1432
75 Ga0307407_10091224 3300031903 Bacteria 1868
76 Ga0307412_10222372 3300031911 Bacteria 1448
77 Ga0307409_100094054 3300031995 Bacteria 2465
78 Ga0307409_100154213 3300031995 Bacteria 1999
79 Ga0307409_100530906 3300031995 Bacteria 1151
80 Ga0307409_100891393 3300031995 Bacteria 903
81 Ga0307416_100025712 3300032002 Bacteria 4322
82 Ga0307416_100649826 3300032002 Bacteria 1139
83 Ga0307414_10856635 3300032004 Bacteria 831
84 Ga0307411_10299783 3300032005 Bacteria 1288
85 Ga0307411_10310211 3300032005 Bacteria 1269
86 Ga0373935_0007197 3300035692 Bacteria 6648
87 Ga0373937_0302878 3300036401 Bacteria 1511
88 Ga0373937_0668379 3300036401 Bacteria 985
89 Ga0395900_0159900 3300037418 Bacteria 2298
90 Ga0395898_0215783 3300037466 Bacteria 1830
91 Ga0395905_0516300 3300037471 Bacteria 1095
92 Ga0436364_1412643 3300037853 Bacteria 1876
93 Ga0436364_1560429 3300037853 Bacteria 2079
94 Ga0395901_0007566 3300038443 Bacteria 10970
95 Ga0436365_0067453 3300039437 Bacteria 1366
96 Ga0436365_0379048 3300039437 Bacteria 981
97 Ga0436365_1523387 3300039437 Unclassified 1036
98 Ga0436362_0569566 3300039453 Bacteria 6091
99 Ga0451791_1487215 3300041451 Bacteria 1115
100 Ga0453684_0395928 3300044712 Bacteria 1548
101 Ga0466960_0350632 3300044901 Bacteria 842
102 Ga0466967_0010816 3300045976 Bacteria 6868
103 Ga0495650_0000321 3300046471 Bacteria 85831
104 Ga0495686_0146128 3300047472 Bacteria 1391
105 Ga0496108_0000034 3300048911 Bacteria 157614
106 Ga0496108_0246095 3300048911 Bacteria 1555
107 Ga0496110_0005601 3300048913 Bacteria 9858
108 Ga0496112_0406605 3300048915 Bacteria 1301
109 Ga0496112_0804193 3300048915 Bacteria 865
110 nmdc:mga05p37_764098_c1 3300050507 Bacteria 1063
111 nmdc:mga06r32_16670_c1 3300050510 Bacteria 6695
112 nmdc:mga06r32_81265_c1 3300050510 Bacteria 3156
113 nmdc:mga0a205_59174_c1 3300050515 Bacteria 3701
114 Ga0590074_002976 3300059423 Bacteria 2794
115 Ga0501082_0295033 3300060353 Bacteria 1412
116 2508734190 2508501050 Bacteria 9633614
117 2509079128 2508501114 Bacteria 7082538
118 2676488225 2675903060 Bacteria 10051191
119 2758638090 2758568016 Bacteria 5645291
120 2774869267 2773857925 Bacteria 6472445
121 2835315537 2835312727 Bacteria 7413381
122 2882457359 2882456835 Bacteria 6863978
123 2884699408 2884693830 Bacteria 11273186
124 2894233381 2894232714 Bacteria 8834183
125 2895447411 2895442618 Bacteria 11027144
126 8002783245 8002775197 Bacteria 10728764
127 Ga0081538_10016693
128 rootH2_10171669
129 Ga0070658_10056685
130 Ga0070682_100502595
131 Ga0070668_100000364
132 Ga0070669_100022386
133 Ga0070673_100745099
134 Ga0070714_100291882
135 Ga0070713_100302371
136 Ga0070705_100235939
137 Ga0070708_100470045
138 Ga0070663_100355052
139 Ga0070706_100299925
140 Ga0070706_100513284
141 Ga0070698_100367147
142 Ga0070699_100098886
143 Ga0070699_100592254
144 Ga0070684_100004402
145 Ga0070684_100549528
146 Ga0070697_100336285
147 Ga0070672_100100797
148 Ga0068857_100427187
149 Ga0068858_100013962
150 Ga0068860_100179605
151 Ga0068862_100218139
152 Ga0081455_10015902
153 Ga0081539_10001103
154 Ga0081539_10002019
155 Ga0070717_10113138
156 Ga0068871_101017850
157 Ga0075431_100197829
158 Ga0075433_10026161
159 Ga0105240_10002859
160 Ga0114129_10209915
161 Ga0105243_10075336
162 Ga0105248_10597960
163 Ga0105237_10026958
164 Ga0105237_10061933
165 Ga0157371_10241409
166 Ga0157374_10335398
167 Ga0163163_10067044
168 Ga0157379_10340884
169 Ga0157376_10357629
170 Ga0213873_10006763
171 Ga0213876_10189210
172 Ga0213876_10228084
173 Ga0207684_10011153
174 Ga0207684_10241448
175 Ga0207695_10005972
176 Ga0207671_10040850
177 Ga0207671_10131393
178 Ga0207649_10275075
179 Ga0207681_10236350
180 Ga0207664_10353797
181 Ga0207691_10625632
182 Ga0207661_10017334
183 Ga0207679_10119922
184 Ga0207679_10424040
185 Ga0207668_10000326
186 Ga0207668_10055067
187 Ga0207703_10123771
188 Ga0207674_10174305
189 Ga0268264_10076517
190 Ga0265331_10050082
191 Ga0265331_10150243
192 Ga0307408_100029041
193 Ga0307408_100336751
194 Ga0307514_10207324
195 Ga0307410_10034370
196 Ga0307410_10061435
197 Ga0307406_10076333
198 Ga0307406_10125244
199 Ga0307406_10160153
200 Ga0307406_10212608
201 Ga0307407_10091224
202 Ga0307412_10222372
203 Ga0307409_100094054
204 Ga0307409_100154213
205 Ga0307409_100530906
206 Ga0307409_100891393
207 Ga0307416_100025712
208 Ga0307416_100649826
209 Ga0307414_10856635
210 Ga0307411_10299783
211 Ga0307411_10310211
212 Ga0373935_0007197
213 Ga0373937_0302878
214 Ga0373937_0668379
215 Ga0395900_0159900
216 Ga0395898_0215783
217 Ga0395905_0516300
218 Ga0436364_1412643
219 Ga0436364_1560429
220 Ga0395901_0007566
221 Ga0436365_0067453
222 Ga0436365_0379048
223 Ga0436365_1523387
224 Ga0436362_0569566
225 Ga0451791_1487215
226 Ga0453684_0395928
227 Ga0466960_0350632
228 Ga0466967_0010816
229 Ga0495650_0000321
230 Ga0495686_0146128
231 Ga0496108_0000034
232 Ga0496108_0246095
233 Ga0496110_0005601
234 Ga0496112_0406605
235 Ga0496112_0804193
236 nmdc:mga05p37_764098_c1
237 nmdc:mga06r32_16670_c1
238 nmdc:mga06r32_81265_c1
239 nmdc:mga0a205_59174_c1
240 Ga0590074_002976
241 Ga0501082_0295033
242 2508734190
243 2509079128
244 2676488225
245 2758638090
246 2774869267
247 2835315537
248 2882457359
249 2884699408
250 2894233381
251 2895447411
252 8002783245

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

17

211

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

23

257

0.98

PF08659

KR

KR domain

18

200

0.86

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

19

241

0.81

PF23441

13

258

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wk6-assembly1.cif.gz_D crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) (g141a) from vibrio cholerae in complex with nadph 0.9761 3 243
4wk6-assembly1.cif.gz_C crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) (g141a) from vibrio cholerae in complex with nadph 0.9745 3 243
5cdy-assembly1.cif.gz_B the crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (fabg) from yersinia pestis at 2.85a resolution 0.9722 3 242
5end-assembly1.cif.gz_A-2 crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg)(q152a) from vibrio cholerae 0.9688 3 243
5end-assembly1.cif.gz_B-2 crystal structure of beta-ketoacyl-acyl carrier protein reductase (fabg)(q152a) from vibrio cholerae 0.9682 3 243
ID Description Score Start End Superfamily
af_C6T421_12_106_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9763 5 79 3.40.50.720
4urfA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9658 4 246 3.40.50.720
3grpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.963 1 242 3.40.50.720
af_P9WGR9_1_247_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9598 4 243 3.40.50.720
5h5xG00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9584 5 246 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A7W0V3K1-F1-model_v4 SDR family oxidoreductase 0.9708 7 246 GO:0016491
AF-A0A1Q3QWK2-F1-model_v4 3-oxoacyl-ACP reductase 0.9705 1 246 GO:0016616
GO:0030497
AF-U7DCS6-F1-model_v4 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) 0.969 1 243 GO:0004316
GO:0006633
GO:0051287
AF-A0A7C4TI82-F1-model_v4 SDR family oxidoreductase 0.9687 75 243 GO:0006633
GO:0016616
GO:0048038
AF-A0A7Y9QUC2-F1-model_v4 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 0.9681 1 246 GO:0004316

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