F124003

General Info

Members Datasets Scaffolds Average Seq Length
124 100 98 331

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0006213|Ga0496121_0006213_4506_5660
Length 384
Sequence MAQTAFATAALVARSANQPGETFGHDALTQPGEPRRRAIGIRSSGCVIMISTFVLFFAAAAVIYFACEYFVNGVEWVGQRLQLGATAVGTVLAAFGTALPESAVTFMAVVFGTTPDQKDIGVGAAMGGPLVLSTVAYAVVGLALMRLRKRRPAVANDPCIKADQQRLARDQGWFMGIFVFKVGLGLLAFAWKPWLGIFFLMAYALYVKRELSADDTCAESDILEPLKLRPRDAQPSMGWACFQTVLALVVIAVASRIFVVQIEVLGQLMGATPHVAALLLAPVATELPEIMNAIIWVRQGKERLALANISGAMMIQATIPSSLGIFLTPWLLDGTLIAAGLFTMMSIGVLWLRFRRESMSLQTLSAVGGLYALFAGYIGWHFYA

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2501025504 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
4 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
5 2510917014 Paraburkholderia silvatlantica SRMrh-20 Isolate Unclassified
6 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
7 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
8 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
9 2515154123 Trinickia symbiotica JPY347 Isolate Nodule
10 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
11 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
12 2551306352 Acinetobacter sp. GG2 Isolate Rhizosphere
13 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
14 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
15 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
16 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
17 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
18 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
19 2846037992 Chromobacterium alticapitis MWU14-2602 Isolate Rhizosphere
20 2855730933 Achromobacter sp. HZ28 Isolate Nodule
21 2855767633 Achromobacter sp. HZ34 Isolate Nodule
22 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
23 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
24 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
25 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
26 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
27 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
28 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
29 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
30 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
36 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
39 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
51 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
52 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
53 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
54 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
60 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
61 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
62 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
65 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
66 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
67 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
68 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
69 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
72 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
78 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
79 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
80 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
81 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
82 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
83 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
84 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
85 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
86 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
93 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
94 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
95 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
96 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
97 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
98 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
99 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
100 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.03
Metatranscriptomes 0
Isolates 20.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.1
Nodule 4.84
Rhizoplane 2.42
Rhizosphere 62.1
Stem 0
Stem Tuber 0
Unclassified 18.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000649 3300003187 Bacteria 29607
2 JGI25165J46597_1000145 3300003214 Bacteria 116948
3 Ga0055529_1001539 3300003763 Bacteria 6590
4 Ga0070658_10000082 3300005327 Bacteria 89656
5 Ga0070683_100069747 3300005329 Bacteria 3278
6 Ga0070660_100004624 3300005339 Bacteria 9530
7 Ga0070699_100089343 3300005518 Bacteria 2692
8 Ga0070684_100302720 3300005535 Bacteria 1467
9 Ga0105240_10051099 3300009093 Bacteria 5205
10 Ga0157369_10022256 3300013105 Bacteria 7078
11 Ga0213872_10001784 3300021361 Bacteria 13433
12 Ga0213872_10003613 3300021361 Bacteria 8491
13 Ga0213872_10013685 3300021361 Bacteria 3798
14 Ga0209672_104418 3300025228 Bacteria 2610
15 Ga0207427_100545 3300025231 Bacteria 19253
16 Ga0209233_1000207 3300025261 Bacteria 117152
17 Ga0209455_1000420 3300025272 Bacteria 33306
18 Ga0209676_1007963 3300025292 Bacteria 4839
19 Ga0209025_1000141 3300025294 Bacteria 184281
20 Ga0207705_10000256 3300025909 Bacteria 51644
21 Ga0207705_10023700 3300025909 Bacteria 4379
22 Ga0207695_10041922 3300025913 Bacteria 4894
23 Ga0207657_10003146 3300025919 Bacteria 17649
24 Ga0207657_10016177 3300025919 Bacteria 7201
25 Ga0209969_1003078 3300027360 Bacteria 2304
26 Ga0209588_1035963 3300027671 Bacteria 1592
27 Ga0265338_10166669 3300028800 Bacteria 1695
28 Ga0265331_10004363 3300031250 Bacteria 8850
29 Ga0265327_10000166 3300031251 Bacteria 141539
30 Ga0395899_0005361 3300037312 Bacteria 9962
31 Ga0436361_0100052 3300039447 Bacteria 31581
32 Ga0436361_0283898 3300039447 Bacteria 24197
33 Ga0436361_0483194 3300039447 Bacteria 2656
34 Ga0436361_1131696 3300039447 Bacteria 1836
35 Ga0466969_0001428 3300044656 Bacteria 12884
36 Ga0466969_0034765 3300044656 Bacteria 2552
37 Ga0466966_0079108 3300044684 Bacteria 2049
38 Ga0466966_0171034 3300044684 Bacteria 1320
39 Ga0466961_0044846 3300044693 Bacteria 2829
40 Ga0466963_0059658 3300044694 Bacteria 2547
41 Ga0466971_0001341 3300044719 Bacteria 10302
42 Ga0466971_0062787 3300044719 Bacteria 1681
43 Ga0466957_0014427 3300044842 Bacteria 4601
44 Ga0466957_0037664 3300044842 Bacteria 2912
45 Ga0466959_0014773 3300045049 Bacteria 5683
46 Ga0466959_0148976 3300045049 Bacteria 1650
47 Ga0466967_0533105 3300045976 Bacteria 1154
48 Ga0495629_0149430 3300046459 Bacteria 1624
49 Ga0495664_0029658 3300046477 Bacteria 3201
50 Ga0495607_0007454 3300046501 Bacteria 7571
51 Ga0495606_0000498 3300046507 Bacteria 64198
52 Ga0495608_0037195 3300046511 Bacteria 3274
53 Ga0495637_0044580 3300046520 Bacteria 1888
54 Ga0495624_0044371 3300046690 Bacteria 2834
55 Ga0495671_0075619 3300046692 Bacteria 1652
56 Ga0495649_0002492 3300046694 Bacteria 12925
57 Ga0495581_0210198 3300047315 Bacteria 1138
58 Ga0495674_0069155 3300047319 Bacteria 3054
59 Ga0495675_0129050 3300047444 Bacteria 1572
60 Ga0495684_0109492 3300047471 Bacteria 2086
61 Ga0495686_0000437 3300047472 Bacteria 64388
62 Ga0495686_0092899 3300047472 Bacteria 1830
63 Ga0495602_0136917 3300048088 Bacteria 1944
64 Ga0496102_0238651 3300048905 Bacteria 1714
65 Ga0496104_0163101 3300048907 Bacteria 2138
66 Ga0496106_0268175 3300048909 Bacteria 1367
67 Ga0496116_0079459 3300048919 Bacteria 2041
68 Ga0496116_0148003 3300048919 Bacteria 1309
69 Ga0496117_0006171 3300048920 Bacteria 12245
70 Ga0496117_0028950 3300048920 Bacteria 4279
71 Ga0496118_0019737 3300048921 Bacteria 6010
72 Ga0496119_0056189 3300048922 Bacteria 2386
73 Ga0496121_0006213 3300048924 Bacteria 14971
74 Ga0496121_0026033 3300048924 Bacteria 5530
75 Ga0496122_0000330 3300048925 Bacteria 102646
76 Ga0496123_0000423 3300048926 Bacteria 76275
77 Ga0496125_0000608 3300048928 Bacteria 60807
78 Ga0496125_0015318 3300048928 Bacteria 7421
79 Ga0496125_0030768 3300048928 Bacteria 4795
80 Ga0496125_0051307 3300048928 Bacteria 3403
81 Ga0496126_0237085 3300048929 Bacteria 1526
82 Ga0501033_0028581 3300049570 Bacteria 4189
83 Ga0501046_0042160 3300049580 Bacteria 3639
84 Ga0501047_0005185 3300049581 Bacteria 12232
85 Ga0501035_0021045 3300049822 Bacteria 5996
86 Ga0501035_0035437 3300049822 Bacteria 4529
87 Ga0501035_0056373 3300049822 Bacteria 3506
88 Ga0501035_0096958 3300049822 Bacteria 2590
89 Ga0501044_0000336 3300049823 Bacteria 59417
90 Ga0501044_0002803 3300049823 Bacteria 19864
91 Ga0501044_0003388 3300049823 Bacteria 17960
92 nmdc:mga00v17_198961_c1 3300050491 Bacteria 1295
93 nmdc:mga0yw44_65502_c1 3300050492 Bacteria 2239
94 Ga0500635_0039754 3300053080 Bacteria 1566
95 Ga0500595_003799 3300053119 Bacteria 6949
96 Ga0500608_001318 3300053122 Bacteria 8861
97 Ga0500618_001447 3300053125 Bacteria 10542
98 Ga0466962_0014209 3300061719 Bacteria 3836

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047444 Ga0495675_0129050 Ga0495675_0129050_204_1253 307
2 3300005518 Ga0070699_100089343 Ga0070699_1000893434 309
3 3300021361 Ga0213872_10013685 Ga0213872_100136853 310
4 3300048907 Ga0496104_0163101 Ga0496104_0163101_294_1475 310
5 3300048088 Ga0495602_0136917 Ga0495602_0136917_426_1571 313
6 3300048905 Ga0496102_0238651 Ga0496102_0238651_60_1244 313
7 3300003763 Ga0055529_1001539 Ga0055529_10015392 315
8 3300025228 Ga0209672_104418 Ga0209672_1044182 315
9 3300025272 Ga0209455_1000420 Ga0209455_100042025 315
10 3300044842 Ga0466957_0037664 Ga0466957_0037664_1161_2144 315
11 3300048929 Ga0496126_0237085 Ga0496126_0237085_550_1500 315
12 3300049822 Ga0501035_0096958 Ga0501035_0096958_1469_2470 315
13 3300005329 Ga0070683_100069747 Ga0070683_1000697472 318
14 3300005535 Ga0070684_100302720 Ga0070684_1003027201 318
15 3300044684 Ga0466966_0171034 Ga0466966_0171034_71_1069 318
16 3300047315 Ga0495581_0210198 Ga0495581_0210198_87_1100 319
17 3300021361 Ga0213872_10001784 Ga0213872_1000178414 320
18 3300031251 Ga0265327_10000166 Ga0265327_10000166116 320
19 3300039447 Ga0436361_0100052 Ga0436361_0100052_1926_2906 320
20 3300046459 Ga0495629_0149430 Ga0495629_0149430_177_1277 320
21 3300044656 Ga0466969_0034765 Ga0466969_0034765_1389_2384 321
22 3300044684 Ga0466966_0079108 Ga0466966_0079108_811_1806 321
23 3300044693 Ga0466961_0044846 Ga0466961_0044846_740_1735 321
24 3300045049 Ga0466959_0148976 Ga0466959_0148976_519_1514 321
25 iso_pu_bacteria 2843690924 2843692711 322
26 3300053122 Ga0500608_001318 Ga0500608_001318_3432_4454 324
27 3300003214 JGI25165J46597_1000145 JGI25165J46597_100014564 325
28 3300013105 Ga0157369_10022256 Ga0157369_100222565 325
29 3300025231 Ga0207427_100545 Ga0207427_1005459 325
30 3300025261 Ga0209233_1000207 Ga0209233_100020771 325
31 3300037312 Ga0395899_0005361 Ga0395899_0005361_3426_4436 325
32 3300021361 Ga0213872_10003613 Ga0213872_100036135 326
33 3300025909 Ga0207705_10023700 Ga0207705_100237002 326
34 3300025919 Ga0207657_10016177 Ga0207657_100161775 326
35 3300039447 Ga0436361_0283898 Ga0436361_0283898_13866_14846 326
36 3300039447 Ga0436361_1131696 Ga0436361_1131696_639_1619 326
37 iso_pu_bacteria 2547132103 2547371314 326
38 iso_pu_bacteria 2808606384 2808970789 326
39 iso_pu_bacteria 2808606390 2809005620 326
40 iso_pu_bacteria 2808606391 2809012623 326
41 3300039447 Ga0436361_0483194 Ga0436361_0483194_1315_2298 327
42 3300044694 Ga0466963_0059658 Ga0466963_0059658_448_1485 327
43 3300044719 Ga0466971_0062787 Ga0466971_0062787_361_1344 327
44 3300045976 Ga0466967_0533105 Ga0466967_0533105_103_1140 327
45 3300061719 Ga0466962_0014209 Ga0466962_0014209_2587_3570 327
46 iso_pu_bacteria 2501025501 2501076320 327
47 iso_pu_bacteria 2501025502 2501077470 327
48 iso_pu_bacteria 2501025504 2501414445 327
49 iso_pu_bacteria 2510917013 2511088896 327
50 iso_pu_bacteria 2510917014 2511099698 327
51 iso_pu_bacteria 2510917015 2511106870 327
52 iso_pu_bacteria 2513237082 2513557495 327
53 iso_pu_bacteria 2513237083 2513566031 327
54 iso_pu_bacteria 2515154123 2515687016 327
55 iso_pu_bacteria 2515154189 2516024362 327
56 iso_pu_bacteria 2883087390 2883093814 327
57 iso_pu_bacteria 8003955200 8003962409 327
58 3300048928 Ga0496125_0000608 Ga0496125_0000608_37789_38778 328
59 3300048928 Ga0496125_0030768 Ga0496125_0030768_2958_4025 328
60 iso_pu_bacteria 2551306352 2552746998 328
61 iso_pu_bacteria 2846037992 2846042188 328
62 iso_pu_bacteria 2802429296 2804848534 329
63 3300048920 Ga0496117_0006171 Ga0496117_0006171_4253_5251 330
64 iso_pu_bacteria 2739367655 2739610670 330
65 iso_pu_bacteria 2881927736 2881930072 330
66 iso_pu_bacteria 8054160619 8054163049 330
67 3300025913 Ga0207695_10041922 Ga0207695_100419222 331
68 3300027671 Ga0209588_1035963 Ga0209588_10359632 331
69 3300047472 Ga0495686_0092899 Ga0495686_0092899_160_1158 331
70 3300048919 Ga0496116_0079459 Ga0496116_0079459_855_1853 331
71 3300053119 Ga0500595_003799 Ga0500595_003799_3551_4558 331
72 3300005327 Ga0070658_10000082 Ga0070658_1000008251 332
73 3300005339 Ga0070660_100004624 Ga0070660_1000046244 332
74 3300009093 Ga0105240_10051099 Ga0105240_100510992 332
75 3300025909 Ga0207705_10000256 Ga0207705_1000025650 332
76 3300025919 Ga0207657_10003146 Ga0207657_100031467 332
77 3300027360 Ga0209969_1003078 Ga0209969_10030782 332
78 3300028800 Ga0265338_10166669 Ga0265338_101666692 332
79 3300031250 Ga0265331_10004363 Ga0265331_100043635 332
80 3300044656 Ga0466969_0001428 Ga0466969_0001428_1906_2925 332
81 3300044719 Ga0466971_0001341 Ga0466971_0001341_7305_8324 332
82 3300044842 Ga0466957_0014427 Ga0466957_0014427_3463_4482 332
83 3300045049 Ga0466959_0014773 Ga0466959_0014773_1192_2211 332
84 3300046501 Ga0495607_0007454 Ga0495607_0007454_257_1255 332
85 3300046507 Ga0495606_0000498 Ga0495606_0000498_49990_50991 332
86 3300046520 Ga0495637_0044580 Ga0495637_0044580_756_1754 332
87 3300046692 Ga0495671_0075619 Ga0495671_0075619_619_1617 332
88 3300046694 Ga0495649_0002492 Ga0495649_0002492_1825_2823 332
89 3300048920 Ga0496117_0028950 Ga0496117_0028950_2755_3765 332
90 3300048921 Ga0496118_0019737 Ga0496118_0019737_1494_2504 332
91 3300049580 Ga0501046_0042160 Ga0501046_0042160_2140_3144 332
92 3300049822 Ga0501035_0035437 Ga0501035_0035437_1904_2902 332
93 3300050492 nmdc:mga0yw44_65502_c1 nmdc:mga0yw44_65502_c1_1155_2177 332
94 3300053125 Ga0500618_001447 Ga0500618_001447_7657_8655 332
95 iso_pu_bacteria 2855730933 2855736016 332
96 iso_pu_bacteria 2855767633 2855772954 332
97 iso_pu_bacteria 2881412998 2881413113 332
98 3300046477 Ga0495664_0029658 Ga0495664_0029658_1670_2689 333
99 3300046690 Ga0495624_0044371 Ga0495624_0044371_1785_2804 333
100 3300047319 Ga0495674_0069155 Ga0495674_0069155_1842_2861 333
101 3300047471 Ga0495684_0109492 Ga0495684_0109492_51_1070 333
102 3300047472 Ga0495686_0000437 Ga0495686_0000437_57450_58478 333
103 3300048909 Ga0496106_0268175 Ga0496106_0268175_63_1223 333
104 3300048922 Ga0496119_0056189 Ga0496119_0056189_698_1708 333
105 3300048924 Ga0496121_0026033 Ga0496121_0026033_2790_3896 333
106 3300048928 Ga0496125_0015318 Ga0496125_0015318_1468_2478 333
107 3300049822 Ga0501035_0021045 Ga0501035_0021045_1122_2123 333
108 3300049822 Ga0501035_0056373 Ga0501035_0056373_1182_2183 333
109 3300049823 Ga0501044_0000336 Ga0501044_0000336_29596_30597 333
110 3300049823 Ga0501044_0003388 Ga0501044_0003388_14555_15556 333
111 3300025292 Ga0209676_1007963 Ga0209676_10079633 334
112 3300053080 Ga0500635_0039754 Ga0500635_0039754_222_1244 334
113 3300046511 Ga0495608_0037195 Ga0495608_0037195_589_1632 335
114 3300003187 JGI25151J46595_10000649 JGI25151J46595_100006495 336
115 3300025294 Ga0209025_1000141 Ga0209025_100014169 336
116 3300048919 Ga0496116_0148003 Ga0496116_0148003_243_1259 336
117 3300048924 Ga0496121_0006213 Ga0496121_0006213_4506_5660 336
118 3300048925 Ga0496122_0000330 Ga0496122_0000330_78614_79630 336
119 3300048926 Ga0496123_0000423 Ga0496123_0000423_68127_69143 336
120 3300048928 Ga0496125_0051307 Ga0496125_0051307_1704_2720 336
121 3300049570 Ga0501033_0028581 Ga0501033_0028581_2272_3282 336
122 3300049581 Ga0501047_0005185 Ga0501047_0005185_2109_3119 336
123 3300049823 Ga0501044_0002803 Ga0501044_0002803_11618_12628 336
124 3300050491 nmdc:mga00v17_198961_c1 nmdc:mga00v17_198961_c1_20_1099 336

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01699

Na_Ca_ex

Sodium/calcium exchanger protein

51

209

0.86

PF01699

Na_Ca_ex

Sodium/calcium exchanger protein

239

383

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
4kjs-assembly1.cif.gz_A structure of native yfke 0.7824 8 334
4kpp-assembly2.cif.gz_B crystal structure of h+/ca2+ exchanger cax 0.7514 4 334
4kpp-assembly2.cif.gz_B crystal structure of h+/ca2+ exchanger cax 0.7393 4 334
4kpp-assembly1.cif.gz_A crystal structure of h+/ca2+ exchanger cax 0.7343 4 325
4kjs-assembly1.cif.gz_A structure of native yfke 0.7217 8 334
ID Description Score Start End Superfamily
5hxcA02 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.8016 36 328 1.20.1420.30
5hxcA02 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.7718 36 328 1.20.1420.30
af_A4HVW9_144_479_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.7558 46 326 1.20.1420.30
af_Q57556_36_302_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.7301 36 328 1.20.1420.30
af_P45394_41_312_1.20.1420.30 Mainly Alpha;Up-down Bundle;A middle domain of Talin 1;NCX, central ion-binding region 0.7238 44 325 1.20.1420.30
ID Description Score Start End GO Terms
AF-A0A1S8N2U7-F1-model_v4 Putative calcium/sodium:proton antiporter 0.9568 52 336 GO:0005262
GO:0005886
GO:0006874
GO:0008273
AF-A0A1S8N2U7-F1-model_v4 Putative calcium/sodium:proton antiporter 0.9502 52 336 GO:0005262
GO:0005886
GO:0006874
GO:0008273
AF-A0A2V2EXM3-F1-model_v4 Sodium/calcium exchanger membrane region domain-containing protein 0.9305 7 334 GO:0005262
GO:0005886
GO:0006874
GO:0008273
AF-A0A7C6LQC0-F1-model_v4 Sodium:calcium antiporter 0.92 45 329 GO:0005262
GO:0005886
GO:0006874
GO:0008273
AF-A0A7J2NGG2-F1-model_v4 Sodium:calcium antiporter 0.918 2 335 GO:0005262
GO:0005886
GO:0006874
GO:0008273

Feature Viewer

pLDDT pTM Quality
86.07 0.85 High
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Predicted Structure (AlphaFold2)

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