F123584

General Info

Members Datasets Scaffolds Average Seq Length
124 102 248 201

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0296962|Ga0466963_0296962_239_919
Length 226
Sequence VGDAGRPLVSARDDILDRIRTALGPERVEAGSAGIPIDRAYRLGSDVDATARIELLVDRLVDYRATVHHADESTLADVVAAVLVERGMRRIAVPPGLPAYLPAGIETLVDTGQLTAADLDAVDGTVTGCAVAIAETGTIVLDGSPDQGRRLLTLVPDYHLCLVRAADVVTTVPEAVARLDPTRPLTFISGPSATSDIELNRVEGVHGPRTLEVVLAGAAVQERGER

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300012476 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610 Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
70 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
71 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
72 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
75 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
76 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
77 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
78 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
84 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
91 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
92 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
93 2582580736 Prauserella sp. Am3 Isolate Unclassified
94 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
95 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
96 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
97 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
98 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
99 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
100 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
101 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
102 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 90.32
Metatranscriptomes 0
Isolates 9.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.61
Nodule 0
Rhizoplane 11.29
Rhizosphere 77.42
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0296962 3300044694 Bacteria 1136
2 Ga0070658_10226911 3300005327 Bacteria 1581
3 Ga0068868_100056043 3300005338 Bacteria 3111
4 Ga0068868_100355179 3300005338 Bacteria 1256
5 Ga0070687_100143355 3300005343 Bacteria 1394
6 Ga0070692_10494653 3300005345 Bacteria 791
7 Ga0070667_100051059 3300005367 Bacteria 3486
8 Ga0070709_10061252 3300005434 Bacteria 2395
9 Ga0070701_10055392 3300005438 Bacteria 2071
10 Ga0070705_100004613 3300005440 Bacteria 6707
11 Ga0070700_100000060 3300005441 Bacteria 82198
12 Ga0070700_100252268 3300005441 Bacteria 1266
13 Ga0070663_100800900 3300005455 Bacteria 808
14 Ga0070678_100349926 3300005456 Bacteria 1270
15 Ga0070681_10685462 3300005458 Bacteria 940
16 Ga0070685_10549777 3300005466 Bacteria 824
17 Ga0070679_100437985 3300005530 Bacteria 1252
18 Ga0070695_100024076 3300005545 Bacteria 3748
19 Ga0070696_100448923 3300005546 Bacteria 1017
20 Ga0068855_100527260 3300005563 Bacteria 1281
21 Ga0068857_100491424 3300005577 Bacteria 1151
22 Ga0070702_100031350 3300005615 Bacteria 2907
23 Ga0068852_101335295 3300005616 Bacteria 739
24 Ga0068859_100050176 3300005617 Bacteria 4192
25 Ga0068864_100121170 3300005618 Bacteria 2339
26 Ga0068864_100199532 3300005618 Bacteria 1837
27 Ga0068861_100035626 3300005719 Bacteria 3688
28 Ga0068861_100924482 3300005719 Bacteria 828
29 Ga0068863_100070069 3300005841 Bacteria 3316
30 Ga0068863_100228879 3300005841 Bacteria 1793
31 Ga0068858_100937302 3300005842 Bacteria 847
32 Ga0081455_10058756 3300005937 Bacteria 3251
33 Ga0075363_100159304 3300006048 Bacteria 1277
34 Ga0068865_100306018 3300006881 Bacteria 1274
35 Ga0097620_100050177 3300006931 Bacteria 4192
36 Ga0105251_10144791 3300009011 Bacteria 1074
37 Ga0105245_10301442 3300009098 Bacteria 1572
38 Ga0105245_11498461 3300009098 Bacteria 725
39 Ga0105239_11134164 3300010375 Bacteria 900
40 Ga0105246_10802688 3300011119 Bacteria 835
41 Ga0157344_1001978 3300012476 Bacteria 1042
42 Ga0157372_11889100 3300013307 Bacteria 686
43 Ga0157375_10268873 3300013308 Bacteria 1867
44 Ga0157377_10098305 3300014745 Bacteria 1739
45 Ga0207688_10030568 3300025901 Bacteria 2971
46 Ga0207647_10048132 3300025904 Bacteria 2649
47 Ga0207647_10168239 3300025904 Bacteria 1277
48 Ga0207705_10119862 3300025909 Bacteria 1951
49 Ga0207662_10020406 3300025918 Bacteria 3781
50 Ga0207652_10188275 3300025921 Bacteria 1856
51 Ga0207652_10316846 3300025921 Bacteria 1408
52 Ga0207681_10008215 3300025923 Bacteria 6386
53 Ga0207687_10099424 3300025927 Bacteria 2137
54 Ga0207687_10160224 3300025927 Bacteria 1726
55 Ga0207664_10010702 3300025929 Bacteria 6486
56 Ga0207704_10313679 3300025938 Bacteria 1207
57 Ga0207667_10670350 3300025949 Bacteria 1041
58 Ga0207677_10056171 3300026023 Bacteria 2695
59 Ga0207703_10197716 3300026035 Bacteria 1785
60 Ga0207678_10268518 3300026067 Bacteria 1463
61 Ga0207708_10000011 3300026075 Bacteria 214227
62 Ga0207708_10042898 3300026075 Bacteria 3447
63 Ga0207648_10006438 3300026089 Bacteria 11669
64 Ga0207648_10050215 3300026089 Bacteria 3648
65 Ga0207676_10216716 3300026095 Bacteria 1702
66 Ga0207675_100058583 3300026118 Bacteria 3595
67 Ga0268266_11084657 3300028379 Bacteria 775
68 Ga0268264_10464564 3300028381 Bacteria 1228
69 Ga0265320_10299843 3300031240 Bacteria 711
70 Ga0307513_10002659 3300031456 Bacteria 24628
71 Ga0307413_10365542 3300031824 Bacteria 1119
72 Ga0307412_10896113 3300031911 Bacteria 777
73 Ga0307409_100445873 3300031995 Bacteria 1248
74 Ga0307416_100124119 3300032002 Bacteria 2309
75 Ga0307414_10301258 3300032004 Bacteria 1356
76 Ga0395899_0057222 3300037312 Bacteria 2879
77 Ga0395900_0396072 3300037418 Bacteria 1346
78 Ga0395898_0030273 3300037466 Bacteria 5417
79 Ga0395901_0013569 3300038443 Bacteria 8285
80 Ga0451797_0558046 3300041453 Bacteria 4579
81 Ga0466963_0002055 3300044694 Bacteria 11098
82 Ga0466963_0061487 3300044694 Bacteria 2511
83 Ga0466963_0269604 3300044694 Bacteria 1196
84 Ga0466963_0375071 3300044694 Bacteria 1003
85 Ga0466971_0116878 3300044719 Bacteria 1233
86 Ga0466957_0010982 3300044842 Bacteria 5209
87 Ga0466958_0175420 3300045836 Bacteria 1359
88 Ga0466967_0001090 3300045976 Bacteria 15032
89 Ga0466967_0151662 3300045976 Bacteria 2167
90 Ga0466967_0191576 3300045976 Bacteria 1933
91 Ga0495602_0292930 3300048088 Bacteria 1194
92 Ga0496102_0012924 3300048905 Bacteria 7229
93 Ga0496102_0145025 3300048905 Bacteria 2228
94 Ga0496103_0003051 3300048906 Bacteria 10302
95 Ga0496106_0174845 3300048909 Bacteria 1703
96 Ga0496107_0235134 3300048910 Bacteria 1364
97 Ga0496108_0013898 3300048911 Bacteria 6567
98 Ga0496108_0126983 3300048911 Bacteria 2190
99 Ga0496109_0397011 3300048912 Bacteria 1303
100 Ga0496110_0039763 3300048913 Bacteria 4096
101 Ga0496110_0073635 3300048913 Bacteria 3031
102 Ga0496111_0095710 3300048914 Bacteria 2179
103 Ga0496114_0095212 3300048917 Bacteria 2534
104 Ga0496114_0095277 3300048917 Bacteria 2533
105 Ga0496125_0395916 3300048928 Bacteria 809
106 Ga0501038_0002829 3300049574 Bacteria 16149
107 Ga0501047_0816942 3300049581 Bacteria 747
108 Ga0501075_0360606 3300049591 Bacteria 1108
109 Ga0501080_0137676 3300049742 Bacteria 2259
110 Ga0501044_0046987 3300049823 Bacteria 4467
111 Ga0500594_0034725 3300053118 Bacteria 1349
112 Ga0466962_0071965 3300061719 Bacteria 1652
113 2555230911 2554235227 Bacteria 3637389
114 2583151826 2582580736 Bacteria 5325865
115 2655033781 2654587600 Bacteria 3911798
116 2738889293 2738541308 Bacteria 7020677
117 2739206727 2738543005 Bacteria 5278128
118 2808876075 2808606366 Bacteria 4415912
119 2808897578 2808606371 Bacteria 4251511
120 2912729519 2912723979 Bacteria 8557534
121 2928145941 2928142448 Bacteria 5288925
122 3003000356 3002998708 Bacteria 11715108
123 3003001235 3002998708 Bacteria 11715108
124 8056066265 8056060235 Bacteria 7259403
125 Ga0466963_0296962
126 Ga0070658_10226911
127 Ga0068868_100056043
128 Ga0068868_100355179
129 Ga0070687_100143355
130 Ga0070692_10494653
131 Ga0070667_100051059
132 Ga0070709_10061252
133 Ga0070701_10055392
134 Ga0070705_100004613
135 Ga0070700_100000060
136 Ga0070700_100252268
137 Ga0070663_100800900
138 Ga0070678_100349926
139 Ga0070681_10685462
140 Ga0070685_10549777
141 Ga0070679_100437985
142 Ga0070695_100024076
143 Ga0070696_100448923
144 Ga0068855_100527260
145 Ga0068857_100491424
146 Ga0070702_100031350
147 Ga0068852_101335295
148 Ga0068859_100050176
149 Ga0068864_100121170
150 Ga0068864_100199532
151 Ga0068861_100035626
152 Ga0068861_100924482
153 Ga0068863_100070069
154 Ga0068863_100228879
155 Ga0068858_100937302
156 Ga0081455_10058756
157 Ga0075363_100159304
158 Ga0068865_100306018
159 Ga0097620_100050177
160 Ga0105251_10144791
161 Ga0105245_10301442
162 Ga0105245_11498461
163 Ga0105239_11134164
164 Ga0105246_10802688
165 Ga0157344_1001978
166 Ga0157372_11889100
167 Ga0157375_10268873
168 Ga0157377_10098305
169 Ga0207688_10030568
170 Ga0207647_10048132
171 Ga0207647_10168239
172 Ga0207705_10119862
173 Ga0207662_10020406
174 Ga0207652_10188275
175 Ga0207652_10316846
176 Ga0207681_10008215
177 Ga0207687_10099424
178 Ga0207687_10160224
179 Ga0207664_10010702
180 Ga0207704_10313679
181 Ga0207667_10670350
182 Ga0207677_10056171
183 Ga0207703_10197716
184 Ga0207678_10268518
185 Ga0207708_10000011
186 Ga0207708_10042898
187 Ga0207648_10006438
188 Ga0207648_10050215
189 Ga0207676_10216716
190 Ga0207675_100058583
191 Ga0268266_11084657
192 Ga0268264_10464564
193 Ga0265320_10299843
194 Ga0307513_10002659
195 Ga0307413_10365542
196 Ga0307412_10896113
197 Ga0307409_100445873
198 Ga0307416_100124119
199 Ga0307414_10301258
200 Ga0395899_0057222
201 Ga0395900_0396072
202 Ga0395898_0030273
203 Ga0395901_0013569
204 Ga0451797_0558046
205 Ga0466963_0002055
206 Ga0466963_0061487
207 Ga0466963_0269604
208 Ga0466963_0375071
209 Ga0466971_0116878
210 Ga0466957_0010982
211 Ga0466958_0175420
212 Ga0466967_0001090
213 Ga0466967_0151662
214 Ga0466967_0191576
215 Ga0495602_0292930
216 Ga0496102_0012924
217 Ga0496102_0145025
218 Ga0496103_0003051
219 Ga0496106_0174845
220 Ga0496107_0235134
221 Ga0496108_0013898
222 Ga0496108_0126983
223 Ga0496109_0397011
224 Ga0496110_0039763
225 Ga0496110_0073635
226 Ga0496111_0095710
227 Ga0496114_0095212
228 Ga0496114_0095277
229 Ga0496125_0395916
230 Ga0501038_0002829
231 Ga0501047_0816942
232 Ga0501075_0360606
233 Ga0501080_0137676
234 Ga0501044_0046987
235 Ga0500594_0034725
236 Ga0466962_0071965
237 2555230911
238 2583151826
239 2655033781
240 2738889293
241 2739206727
242 2808876075
243 2808897578
244 2912729519
245 2928145941
246 3003000356
247 3003001235
248 8056066265

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02589

LUD_dom

LUD domain

53

216

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g40-assembly1.cif.gz_A-2 crystal structure of a duf162 family protein (dr_1909) from deinococcus radiodurans at 1.70 a resolution 0.87 38 206
2g40-assembly1.cif.gz_A-2 crystal structure of a duf162 family protein (dr_1909) from deinococcus radiodurans at 1.70 a resolution 0.8599 38 206
3iv7-assembly1.cif.gz_B crystal structure of iron-containing alcohol dehydrogenase (np_602249.1) from corynebacterium glutamicum atcc 13032 kitasato at 2.07 a resolution 0.5487 56 152
4rfl-assembly2.cif.gz_C crystal structure of g1pdh with nadph from methanocaldococcus jannaschii 0.5188 56 152
4rgq-assembly2.cif.gz_C crystal structure of the methanocaldococcus jannaschii g1pdh with nadph and dhap 0.5141 56 152
ID Description Score Start End Superfamily
2g40A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.87 38 206 3.40.50.10420
2g40A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.8599 38 206 3.40.50.10420
af_P77433_40_228_3.40.50.10420 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.815 38 204 3.40.50.10420
af_P77433_40_228_3.40.50.10420 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.7252 38 204 3.40.50.10420
2zpaB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.5751 56 119 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7K2PCR5-F1-model_v4 Lactate utilization protein C 0.9176 78 170
AF-A0A4R7IUF0-F1-model_v4 deleted 0.9111 45 205
AF-A0A7J9ZRK5-F1-model_v4 Lactate utilization protein C 0.9095 42 206
AF-A0A6G3X421-F1-model_v4 Lactate utilization protein C 0.9051 30 152
AF-A0A7W1MZN5-F1-model_v4 LUD domain-containing protein 0.9046 44 205

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