F111993

General Info

Members Datasets Scaffolds Average Seq Length
121 92 108 245

Family's Representative Sequence

Representative Sequence 3300053087|Ga0500643_000082|Ga0500643_000082_65394_66197
Length 267
Sequence VVRLPRRPRSSVPPLTGFLSPAAPRIFAHRGLALDAPENTLLAFARAVAVGAAYIETDVQATADGVAVVAHDPDLTRLAGRADRIRSLTLAELQRIDLGHGQTFCTLAEALDGFPETRFNIDVKAAAAAEPAGATILKLGASDRVLVSSFDERRRIAALRMLPGVVSSSSARRFVVALLAGKVGLSPAVRRSLRGLVAVQVPERALGMSVVTERMIGRLHAAGVEIHVWTVNDPRRMRELLELGVDGIITDRVDLGLAVAEEIAAKP

Samples

Sample ID Description Type Environment
1 2643221572 Leifsonia sp. Root60 Isolate Unclassified
2 2643221616 Leifsonia sp. Root227 Isolate Unclassified
3 2643221619 Agromyces sp. Root81 Isolate Unclassified
4 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
5 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
6 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
7 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
8 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
9 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
10 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
11 2928153084 Leifsonia sp. 563 Isolate Unclassified
12 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
13 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
14 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
15 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
16 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
17 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
31 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
35 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
36 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
46 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
47 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
48 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
49 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
50 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
57 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
58 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
64 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
65 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
66 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
67 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
68 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
69 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
81 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
82 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
83 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
84 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
85 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
86 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
87 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
88 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
89 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
90 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
91 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
92 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.43
Metatranscriptomes 0.83
Isolates 10.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 28.93
Nodule 0
Rhizoplane 7.44
Rhizosphere 47.11
Stem 0
Stem Tuber 0.83
Unclassified 15.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000002 3300003214 Bacteria 765387
2 Ga0055539_1000008 3300003752 Bacteria 537665
3 Ga0055533_1000001 3300003756 Bacteria 1863437
4 Ga0055525_1000197 3300003759 Bacteria 71227
5 Ga0070658_10000090 3300005327 Bacteria 81871
6 Ga0070658_10122160 3300005327 Bacteria 2164
7 Ga0070660_100054283 3300005339 Bacteria 3094
8 Ga0070659_100060222 3300005366 Bacteria 2999
9 Ga0070663_100244070 3300005455 Bacteria 1419
10 Ga0068855_100154024 3300005563 Bacteria 2612
11 Ga0075365_10004083 3300006038 Bacteria 7668
12 Ga0075365_10012722 3300006038 Bacteria 5008
13 Ga0075365_10073299 3300006038 Bacteria 2308
14 Ga0075364_10004856 3300006051 Bacteria 7787
15 Ga0075364_10085429 3300006051 Bacteria 2090
16 Ga0075428_100004872 3300006844 Bacteria 14897
17 Ga0075430_100435929 3300006846 Bacteria 1082
18 Ga0157371_10004501 3300013102 Bacteria 12146
19 Ga0157371_10243587 3300013102 Bacteria 1294
20 Ga0157370_10007869 3300013104 Bacteria 11553
21 Ga0157369_10060100 3300013105 Bacteria 4098
22 Ga0157369_10164226 3300013105 Bacteria 2342
23 Ga0157369_10756452 3300013105 Bacteria 999
24 Ga0206353_11101250 3300020082 Bacteria 2604
25 Ga0209566_100050 3300025225 Bacteria 234653
26 Ga0209674_100001 3300025226 Bacteria 4013750
27 Ga0209563_100001 3300025230 Bacteria 4013775
28 Ga0207427_100052 3300025231 Bacteria 218228
29 Ga0209437_100783 3300025233 Bacteria 14933
30 Ga0209677_100001 3300025253 Bacteria 4013787
31 Ga0209677_103860 3300025253 Bacteria 4604
32 Ga0209233_1000001 3300025261 Bacteria 2992747
33 Ga0209455_1008143 3300025272 Bacteria 2879
34 Ga0207705_10000006 3300025909 Bacteria 657147
35 Ga0207657_10081263 3300025919 Bacteria 2723
36 Ga0207690_10053658 3300025932 Bacteria 2706
37 Ga0207667_10071851 3300025949 Bacteria 3597
38 Ga0207678_10381087 3300026067 Bacteria 1219
39 Ga0207702_10127693 3300026078 Bacteria 2285
40 Ga0307515_10117793 3300028794 Bacteria 3037
41 Ga0307405_10211336 3300031731 Bacteria 1417
42 Ga0307414_10921235 3300032004 Bacteria 802
43 Ga0395899_0001421 3300037312 Bacteria 20518
44 Ga0395899_0207270 3300037312 Bacteria 1364
45 Ga0395900_0000951 3300037418 Bacteria 37787
46 Ga0395898_0000677 3300037466 Bacteria 61608
47 Ga0395901_0094588 3300038443 Bacteria 3131
48 Ga0451793_0249137 3300041452 Bacteria 1701
49 Ga0466972_0036690 3300044658 Bacteria 2397
50 Ga0466972_0161236 3300044658 Bacteria 1053
51 Ga0466966_0137964 3300044684 Bacteria 1491
52 Ga0466966_0352184 3300044684 Bacteria 885
53 Ga0466970_0095922 3300044765 Bacteria 1612
54 Ga0466960_0015359 3300044901 Bacteria 3299
55 Ga0496100_0019991 3300048903 Bacteria 4007
56 Ga0496101_0026031 3300048904 Bacteria 4064
57 Ga0496102_0448217 3300048905 Bacteria 1211
58 Ga0496103_0116945 3300048906 Bacteria 1697
59 Ga0496104_0389387 3300048907 Bacteria 1306
60 Ga0496105_0085697 3300048908 Bacteria 2603
61 Ga0496115_0076161 3300048918 Bacteria 2726
62 Ga0496115_0080183 3300048918 Bacteria 2657
63 Ga0496117_0007695 3300048920 Bacteria 10431
64 Ga0496117_0224270 3300048920 Bacteria 1043
65 Ga0496119_0004223 3300048922 Bacteria 14417
66 Ga0496121_0000040 3300048924 Bacteria 348494
67 Ga0496122_0003125 3300048925 Bacteria 22176
68 Ga0496123_0003108 3300048926 Bacteria 19039
69 Ga0496126_0014064 3300048929 Bacteria 8108
70 Ga0496126_0019871 3300048929 Bacteria 6605
71 Ga0496126_0051158 3300048929 Bacteria 3762
72 Ga0496126_0076984 3300048929 Bacteria 2958
73 Ga0496126_0694570 3300048929 Bacteria 791
74 Ga0501033_0066746 3300049570 Bacteria 2645
75 Ga0501037_0009471 3300049573 Bacteria 7150
76 Ga0501043_0088688 3300049579 Bacteria 2431
77 Ga0501043_0242129 3300049579 Bacteria 1391
78 Ga0501047_0014761 3300049581 Bacteria 7433
79 Ga0501047_0020910 3300049581 Bacteria 6286
80 Ga0501068_0260125 3300049584 Bacteria 1107
81 Ga0501069_0306721 3300049585 Bacteria 931
82 Ga0501070_0000191 3300049586 Bacteria 57453
83 Ga0501070_0006139 3300049586 Bacteria 10243
84 Ga0501070_0111000 3300049586 Bacteria 2266
85 Ga0501071_0000166 3300049587 Bacteria 28426
86 Ga0501083_0000042 3300049744 Bacteria 92618
87 Ga0501035_0002282 3300049822 Bacteria 18955
88 Ga0501035_0133042 3300049822 Bacteria 2167
89 Ga0501035_0183332 3300049822 Bacteria 1803
90 nmdc:mga00v17_156960_c1 3300050491 Bacteria 1463
91 nmdc:mga00v17_78654_c1 3300050491 Bacteria 2055
92 nmdc:mga00v17_9930_c1 3300050491 Bacteria 5178
93 nmdc:mga0yw44_101615_c1 3300050492 Bacteria 1832
94 nmdc:mga0yw44_123059_c1 3300050492 Bacteria 1672
95 nmdc:mga0yw44_892_c1 3300050492 Bacteria 11255
96 nmdc:mga0qj67_209854_c1 3300050509 Bacteria 1582
97 Ga0500635_0000044 3300053080 Bacteria 87331
98 Ga0500643_000082 3300053087 Bacteria 101189
99 Ga0500556_0000001 3300053104 Bacteria 1135060
100 Ga0500556_0000084 3300053104 Bacteria 89510
101 Ga0500562_000209 3300053108 Bacteria 15853
102 Ga0500593_000721 3300053117 Bacteria 12548
103 Ga0500655_015271 3300053133 Bacteria 1408
104 Ga0500559_0000233 3300053136 Bacteria 44209
105 Ga0500568_0000016 3300053139 Bacteria 217194
106 Ga0500568_0000508 3300053139 Bacteria 28665
107 Ga0500573_0127143 3300053140 Bacteria 1414
108 Ga0501084_0473201 3300054114 Bacteria 1059

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049744 Ga0501083_0000042 Ga0501083_0000042_24786_25529 213
2 3300037312 Ga0395899_0207270 Ga0395899_0207270_208_957 215
3 3300037418 Ga0395900_0000951 Ga0395900_0000951_12567_13316 215
4 3300037466 Ga0395898_0000677 Ga0395898_0000677_29402_30151 215
5 3300041452 Ga0451793_0249137 Ga0451793_0249137_128_859 217
6 3300048925 Ga0496122_0003125 Ga0496122_0003125_6995_7714 218
7 3300048926 Ga0496123_0003108 Ga0496123_0003108_1500_2219 218
8 3300005327 Ga0070658_10122160 Ga0070658_101221603 225
9 3300013105 Ga0157369_10756452 Ga0157369_107564521 225
10 3300026078 Ga0207702_10127693 Ga0207702_101276933 225
11 3300025253 Ga0209677_103860 Ga0209677_1038603 227
12 3300026067 Ga0207678_10381087 Ga0207678_103810872 227
13 3300049570 Ga0501033_0066746 Ga0501033_0066746_1163_1897 231
14 3300049822 Ga0501035_0133042 Ga0501035_0133042_1019_1753 231
15 3300038443 Ga0395901_0094588 Ga0395901_0094588_2001_2750 232
16 3300049579 Ga0501043_0242129 Ga0501043_0242129_504_1238 232
17 3300049581 Ga0501047_0020910 Ga0501047_0020910_1389_2123 232
18 3300025919 Ga0207657_10081263 Ga0207657_100812634 233
19 3300025932 Ga0207690_10053658 Ga0207690_100536582 233
20 3300013105 Ga0157369_10060100 Ga0157369_100601004 234
21 3300013105 Ga0157369_10164226 Ga0157369_101642263 234
22 3300006844 Ga0075428_100004872 Ga0075428_1000048723 235
23 3300037312 Ga0395899_0001421 Ga0395899_0001421_9176_9925 235
24 iso_pu_bacteria 2643221619 2644110950 235
25 iso_pu_bacteria 2870622029 2870623366 235
26 iso_pu_bacteria 2939657138 2939657798 235
27 3300044658 Ga0466972_0036690 Ga0466972_0036690_456_1205 238
28 3300006038 Ga0075365_10012722 Ga0075365_100127224 239
29 3300006051 Ga0075364_10004856 Ga0075364_100048563 239
30 3300013102 Ga0157371_10004501 Ga0157371_100045014 239
31 3300020082 Ga0206353_11101250 Ga0206353_111012502 239
32 3300031731 Ga0307405_10211336 Ga0307405_102113361 239
33 3300032004 Ga0307414_10921235 Ga0307414_109212351 239
34 3300048922 Ga0496119_0004223 Ga0496119_0004223_12272_12997 239
35 3300048929 Ga0496126_0019871 Ga0496126_0019871_2662_3384 239
36 3300049573 Ga0501037_0009471 Ga0501037_0009471_436_1161 239
37 3300049581 Ga0501047_0014761 Ga0501047_0014761_3361_4086 239
38 3300049584 Ga0501068_0260125 Ga0501068_0260125_93_815 239
39 3300049586 Ga0501070_0111000 Ga0501070_0111000_1496_2218 239
40 3300049822 Ga0501035_0002282 Ga0501035_0002282_9806_10531 239
41 3300050491 nmdc:mga00v17_78654_c1 nmdc:mga00v17_78654_c1_966_1688 239
42 3300050491 nmdc:mga00v17_9930_c1 nmdc:mga00v17_9930_c1_2899_3621 239
43 3300050492 nmdc:mga0yw44_101615_c1 nmdc:mga0yw44_101615_c1_899_1621 239
44 3300053136 Ga0500559_0000233 Ga0500559_0000233_21038_21760 239
45 3300053139 Ga0500568_0000508 Ga0500568_0000508_18991_19722 239
46 3300048903 Ga0496100_0019991 Ga0496100_0019991_803_1552 240
47 3300048904 Ga0496101_0026031 Ga0496101_0026031_860_1609 240
48 3300048918 Ga0496115_0076161 Ga0496115_0076161_563_1312 240
49 3300048929 Ga0496126_0076984 Ga0496126_0076984_590_1339 240
50 3300049822 Ga0501035_0183332 Ga0501035_0183332_737_1486 240
51 3300048905 Ga0496102_0448217 Ga0496102_0448217_234_983 241
52 3300048906 Ga0496103_0116945 Ga0496103_0116945_819_1568 241
53 3300048929 Ga0496126_0014064 Ga0496126_0014064_1197_1946 242
54 iso_pu_bacteria 2643221616 2644096045 245
55 iso_pu_bacteria 2884763398 2884765409 245
56 iso_pu_bacteria 2919055335 2919058147 245
57 iso_pu_bacteria 2919523602 2919524522 245
58 iso_pu_bacteria 2928153084 2928156557 245
59 3300006038 Ga0075365_10004083 Ga0075365_100040832 248
60 3300006051 Ga0075364_10085429 Ga0075364_100854292 248
61 3300006846 Ga0075430_100435929 Ga0075430_1004359291 248
62 3300050491 nmdc:mga00v17_156960_c1 nmdc:mga00v17_156960_c1_436_1185 248
63 3300050492 nmdc:mga0yw44_892_c1 nmdc:mga0yw44_892_c1_1813_2562 248
64 3300050509 nmdc:mga0qj67_209854_c1 nmdc:mga0qj67_209854_c1_520_1281 248
65 3300053108 Ga0500562_000209 Ga0500562_000209_9132_9881 248
66 3300003214 JGI25165J46597_1000002 JGI25165J46597_1000002711 249
67 3300003752 Ga0055539_1000008 Ga0055539_1000008276 249
68 3300003756 Ga0055533_1000001 Ga0055533_1000001795 249
69 3300003759 Ga0055525_1000197 Ga0055525_100019737 249
70 3300005327 Ga0070658_10000090 Ga0070658_1000009063 249
71 3300005339 Ga0070660_100054283 Ga0070660_1000542834 249
72 3300005366 Ga0070659_100060222 Ga0070659_1000602221 249
73 3300005455 Ga0070663_100244070 Ga0070663_1002440701 249
74 3300005563 Ga0068855_100154024 Ga0068855_1001540244 249
75 3300006038 Ga0075365_10073299 Ga0075365_100732994 249
76 3300013102 Ga0157371_10243587 Ga0157371_102435871 249
77 3300013104 Ga0157370_10007869 Ga0157370_100078696 249
78 3300025225 Ga0209566_100050 Ga0209566_100050193 249
79 3300025226 Ga0209674_100001 Ga0209674_100001795 249
80 3300025230 Ga0209563_100001 Ga0209563_100001795 249
81 3300025231 Ga0207427_100052 Ga0207427_100052149 249
82 3300025233 Ga0209437_100783 Ga0209437_1007835 249
83 3300025253 Ga0209677_100001 Ga0209677_100001795 249
84 3300025261 Ga0209233_1000001 Ga0209233_10000012097 249
85 3300025272 Ga0209455_1008143 Ga0209455_10081433 249
86 3300025909 Ga0207705_10000006 Ga0207705_10000006531 249
87 3300025949 Ga0207667_10071851 Ga0207667_100718513 249
88 3300028794 Ga0307515_10117793 Ga0307515_101177933 249
89 3300044658 Ga0466972_0161236 Ga0466972_0161236_186_935 249
90 3300044684 Ga0466966_0137964 Ga0466966_0137964_122_871 249
91 3300044684 Ga0466966_0352184 Ga0466966_0352184_31_786 249
92 3300044765 Ga0466970_0095922 Ga0466970_0095922_488_1237 249
93 3300044901 Ga0466960_0015359 Ga0466960_0015359_850_1599 249
94 3300048907 Ga0496104_0389387 Ga0496104_0389387_163_951 249
95 3300048908 Ga0496105_0085697 Ga0496105_0085697_1716_2504 249
96 3300048918 Ga0496115_0080183 Ga0496115_0080183_218_1006 249
97 3300048920 Ga0496117_0007695 Ga0496117_0007695_4985_5734 249
98 3300048920 Ga0496117_0224270 Ga0496117_0224270_275_1024 249
99 3300048924 Ga0496121_0000040 Ga0496121_0000040_92084_92875 249
100 3300048929 Ga0496126_0051158 Ga0496126_0051158_1738_2487 249
101 3300048929 Ga0496126_0694570 Ga0496126_0694570_17_772 249
102 3300049579 Ga0501043_0088688 Ga0501043_0088688_682_1461 249
103 3300049585 Ga0501069_0306721 Ga0501069_0306721_116_895 249
104 3300049586 Ga0501070_0000191 Ga0501070_0000191_38428_39177 249
105 3300049586 Ga0501070_0006139 Ga0501070_0006139_7183_7962 249
106 3300049587 Ga0501071_0000166 Ga0501071_0000166_3991_4770 249
107 3300050492 nmdc:mga0yw44_123059_c1 nmdc:mga0yw44_123059_c1_184_945 249
108 3300053080 Ga0500635_0000044 Ga0500635_0000044_30296_31045 249
109 3300053087 Ga0500643_000082 Ga0500643_000082_65394_66197 249
110 3300053104 Ga0500556_0000001 Ga0500556_0000001_143330_144124 249
111 3300053104 Ga0500556_0000084 Ga0500556_0000084_13261_14058 249
112 3300053117 Ga0500593_000721 Ga0500593_000721_8765_9562 249
113 3300053133 Ga0500655_015271 Ga0500655_015271_384_1181 249
114 3300053139 Ga0500568_0000016 Ga0500568_0000016_68863_69657 249
115 3300053140 Ga0500573_0127143 Ga0500573_0127143_406_1173 249
116 3300054114 Ga0501084_0473201 Ga0501084_0473201_38_817 249
117 iso_pu_bacteria 2643221572 2643875322 249
118 iso_pu_bacteria 2643221669 2644382378 249
119 iso_pu_bacteria 2852643534 2852645368 249
120 iso_pu_bacteria 2895660088 2895661411 249
121 iso_pu_bacteria 2966924647 2966924751 249

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13653

GDPD_2

Glycerophosphoryl diester phosphodiesterase family

225

254

0.92

PF03009

GDPD

Glycerophosphoryl diester phosphodiesterase family

29

255

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ymp-assembly1.cif.gz_A crystal structure of lysoplasmalogen specific phospholipase d 0.8891 8 248
8ghi-assembly1.cif.gz_A crystal structure of staphylococcus aureus lysophosphatidylglycerol phospholipase d 0.8792 2 247
8ghi-assembly1.cif.gz_A crystal structure of staphylococcus aureus lysophosphatidylglycerol phospholipase d 0.8661 2 247
7ymp-assembly1.cif.gz_A crystal structure of lysoplasmalogen specific phospholipase d 0.8582 8 248
4r7o-assembly5.cif.gz_E crystal structure of putative glycerophosphoryl diester phosphodiesterasefrom bacillus anthraci 0.8569 12 246
ID Description Score Start End Superfamily
af_O07244_11_250_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.9383 12 248 3.20.20.190
af_Q2FZF9_25_304_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.9249 2 246 3.20.20.190
af_O07244_11_250_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.9232 12 248 3.20.20.190
af_Q55BE9_41_333_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.9128 5 248 3.20.20.190
af_Q2FZF9_25_304_3.20.20.190 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphatidylinositol (PI) phosphodiesterase 0.907 2 246 3.20.20.190
ID Description Score Start End GO Terms
AF-A0A421ABN1-F1-model_v4 deleted 0.9926 1 249
AF-A0A4R9A3Z8-F1-model_v4 Glycerophosphodiester phosphodiesterase 0.9857 3 245 GO:0006629
GO:0008081
AF-A0A6H3IYB5-F1-model_v4 deleted 0.9835 2 248
AF-A0A522DHI8-F1-model_v4 Glycerophosphodiester phosphodiesterase 0.9803 27 248 GO:0006629
GO:0008081
AF-A0A7K0WBK1-F1-model_v4 Glycerophosphodiester phosphodiesterase 0.9766 2 246 GO:0006629
GO:0008081

Feature Viewer

pLDDT pTM Quality
94.61 0.9 High
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Predicted Structure (AlphaFold2)

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